mRNA_C-australica_Contig_1004.1.3 (mRNA) Chrysoparadoxa australica CS_1217
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_C-australica_Contig_1004.1.3 vs. uniprot
Match: D7FLL8_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FLL8_ECTSI) HSP 1 Score: 354 bits (909), Expect = 1.540e-109 Identity = 246/633 (38.86%), Postives = 328/633 (51.82%), Query Frame = 2 Query: 137 LRGGEQESEGLS-GGETFTCEHIEATGVEQDTAFSAGG---DAATVMLRHQGVVLV-EEECLTPGSKQGKVAYAITSDGCLQVGSLDHKEGVEDRVRAARMLVHLLNTMFKHPKMIAKIGSNDAARELCHLVAEDAASLVKQCRAGLLSGGTTLRALFKRTLLPIGFPHTVPPEYLRFLVWYTMQDMSTSIRGFLATQAVFEGMGVGKAGSSSLAATSNWMIRKGAGKIGGLVFTGLFSKSLGANIKGWRLLADVALDLSLTLEMFAA--CFPK--RLLSLICVASVLKAISGVAGGATDAAIVEHFSIHNNIADVTAKGSAQHTVSSLVGMGIAFGFLKVINVSPVVK----WATFILLTVEHVLCNLECMRTLALRSLNPARLRVLASNYVDR-LGHLPS---SRGQLQAGLV--------------------------------GLP-----ALSLQSTARREDLVTIPWRGWLRRARLLPWGDSLEINLGVRCKSLVEDVDDLLWITDLYRSESIMVGVDVDYRPLGPKFNTVILAALRRDAGREEQVFVYLLAHLVRRHLLQQSDEIPQG-DAVLRKLYLRHVMEVNLRRAKSEWKEFRKALVAEGWDLQRVSLSPLPHRGSWGGVLK 1870 LRGG E + L GGE + T A S G A GV LV E T GSK ++ + + ++ V A + + K G +A +E VA + + A + G +R T LP G+P +V PEY+R+ W +QD+S+ +RG LATQAV EGMGVG+AGS+ LAAT WM R GA IGGL+FT + S + G NIK WRL AD + D+ L LEM A F + R L LIC+ASV KA GVAGGAT AAI EH++I NNIAD+ AK AQHTV+SL+G+G++ F + ++V W + +LT+ H+L N MRTLALRSLNP R +L + Y+ + LG +RG Q G P LS + ARRE ++ +P GW R L PWGD L+I++GV ++LV + DDLLW+T LY E MVGV V Y+PLG + T + ALR DA E+++ A++++ +++ D IP G D V R L+LR V E LR + E+ FRKALV EGWDL RV+L P G WG + K Sbjct: 47 LRGGSDEGDALHVGGEEEKVKRETPTATRASAADSEGEAWPGAEEEGTPFGGVALVTERSTATGGSKDRQLPASTAPSPPPHLPTIPPPSRENTAVANASAEPRRVLQGVRRCAGDLKTGLVEATKE----VARETRAAAAAAGACVARAGVAVRGGLMNTFLPAGYPGSVRPEYVRYRCWDILQDLSSHLRGVLATQAVLEGMGVGRAGSTPLAATLQWMARDGASMIGGLLFTSVASANFGVNIKTWRLFADTSNDIGLALEMLAPLPAFREGGRFLRLICIASVFKAACGVAGGATGAAITEHWAIDNNIADIGAKNGAQHTVASLLGLGLSVWFARAVSVGGSASGSRVWGWYAVLTLVHLLANYAAMRTLALRSLNPTRASLLVTEYLGQALGSTEGRSGTRGSEQXXXXXXXXXXXXXXXXXGGEERKGPALDWMGRIRDQGSPPESVAVLSPFAAARRERILVLP--GWFRA--LKPWGDFLQIHVGVPVRALVGEADDLLWLTSLYHDERSMVGVQVSYKPLGARMETTVNLALREDASPEDRLHAMFQANVIQHLVVRDPDGIPHGEDGVDRTLFLRKVTEEALRVTRKEFPAFRKALVREGWDLSRVTLGGGPWVGRWGSLAK 671
BLAST of mRNA_C-australica_Contig_1004.1.3 vs. uniprot
Match: A0A7S0EV14_9CRYP (Hypothetical protein n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0EV14_9CRYP) HSP 1 Score: 228 bits (580), Expect = 6.890e-64 Identity = 149/430 (34.65%), Postives = 233/430 (54.19%), Query Frame = 2 Query: 566 SGGTTLRALFKRTLLPIGFPHTVPPEYLRFLVWYTMQDMSTSIRGFLATQAVFEGMGVGKAGSSSLAATSNWMIRKGAGKIGGLVFTGLFSKSLGANIKGWRLLADVALDLSLTLEMFAACFPKRLLSLICVASVLKAISGVAGGATDAAIVEHFSIHNNIADVTAKGSAQHTVSSLVGMGIAFGFLKVINVSPVVKWATFILLTVEHVLCNLECMRTLALRSLNPARLRVLASNYVDRLGHLPSSRGQLQAGLVGLPALSLQSTARREDLVTIPWRGWLRRARLLPWGDSLEINLGVRCKSLVEDVDDLLWITDLYRSESIMVGVDVDYRPLGPKFNTVILAALRRDAGREEQVFVYLLAHLVRRHLLQQSDEIPQGDAVLRKLYLRHVMEVNLRRAKSEWKEFRKALVAEGWDLQRVSLSPLPHRGSW 1855 SG L+ + T LP G+P ++P EY ++ + +QD+++++RG L+TQ + EGMGVGKAG +SLAAT WM R G+ +GGL+FT S S G +IK WRL AD+ D++L L+M A +P+ L +IC++SV KA+ GV+ GA +AAIV+H++ NIADV AK AQHT+ S++ + + F F + N S WA+F++LT HV MRTLA LR+L + +DR+ LP G +++ A+ + L+ +PW P+ S E+ GV +++ L + L+ E MV D+ K VI A ++ + + Y+ AH++ R L S + + ++++R+ L + +S ++ K L+ GWDLQ+VSL G W Sbjct: 53 SGMLKLKRIMYATFLPSGYPASLPDEYTKYQAYNLLQDLTSNLRGILSTQKILEGMGVGKAGVTSLAATMQWMARDGSSMLGGLLFTAFASSSFGIHIKRWRLFADLINDVALLLDMLAPAYPELFLPIICLSSVFKAMCGVSAGACNAAIVQHWATRGNIADVGAKTGAQHTIVSVLALPLGFLFAQAANSSLQSLWASFVVLTSIHVWACYSMMRTLA--------LRILTRSQLDRI--LPKLLFDDNEKSKGTSSMTPACLAKTDKLLWLPWAED-------PFC-SFELVFGVSLSTILRSGIPLKKLISLFEGEKFMVAQADDHPREAKKPKLVICVA--EESTPRDYLRAYITAHVIAREL-NFSTKPTEQESLIRQA---------LEKMRSSYQGVEKRLMDAGWDLQQVSLGQPAWVGRW 452
BLAST of mRNA_C-australica_Contig_1004.1.3 vs. uniprot
Match: W7U3D2_9STRA (Uncharacterized protein n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U3D2_9STRA) HSP 1 Score: 229 bits (585), Expect = 1.670e-63 Identity = 162/436 (37.16%), Postives = 226/436 (51.83%), Query Frame = 2 Query: 581 LRALFKRTLLPIGFPHTVPPEYLRFLVWYTMQDMSTSIRGFLATQAVFEGMGVGKAGSSSLAATSNWMIRKGAGKIGGLVFTGLFSKSLGANIKGWRLLADVALDLSLTLEMFAACFPKRLLSLICVASVLKAISGVAGGATDAAIVEHFSIHNNIADVTAKGSAQHTVSSLVGMGIAFGFLKVINVSPVVKWATFILLTVEHVLCNLECMRTLALRSLNPARLRVLASNYVDRLGHL-PSSRGQLQAGLVGLPALSLQSTARREDLVTIPWRGWLRRARLLPWGDS----LEINLGVRCKSLVEDVDDLLWITDLYRSESIMVGV------DVDYRPLGPKFNTVILAALRRDAGREEQVFVYLLAHLVRRHLLQQSDEIPQGDAVLRKLYLRHVMEVNLRRAKSEWKEFRKA-------LVAEGWDLQRVSLSP 1834 L+ L LP+GFP +V PEYLR+ W +QD+ST +RG LATQA+ EG+GVG+ G++ LAAT W+ R GA + GLVFT S + G N K WRL AD +D+ +TL+M A FPK L IC+ASV K++ G+A GA++ IVEH + NN+A+V AKG AQHT SL G+G F +V N SP W + LLTV H+ N MR LA S+N RL VL + + + L P+ + + +V + R L T ++ RRA D+ I LGVR K L + L + L+ E M+ + ++ R + K I ALR DA + L A L+ R + AV RK ++ E+ S ++E + L +GW+L+RV LSP Sbjct: 132 LKTLLHTVFLPVGFPSSVAPEYLRYQQWNVVQDLSTYLRGILATQAILEGVGVGREGATPLAATLQWITRDGASMMSGLVFTSFLSTNFGVNAKSWRLFADFMVDIGITLDMLAPLFPKNFLLCICLASVCKSLCGIAAGASNGNIVEHMARTNNLAEVLAKGGAQHTAVSLFGLGFGMWFARVANQSPRRVWTAYTLLTVIHLTANYAAMRVLAFTSINRRRLNVLLTAFRENASVLSPAEVARRETIIVDV------GRWRPPKLWTALFQKGKRRATAELAKDAHAPIWNIRLGVRVKDLTRFAEGLTELQRLFSQEQYMLNMVNVFDGELPTRKVTRKIQ--IAVALREDATNLTLLKACLHADLIARRGFE---------AVKRKKGTENI-EIISSVISSTYQELCQCFPNMVQGLRRQGWNLERVLLSP 549
BLAST of mRNA_C-australica_Contig_1004.1.3 vs. uniprot
Match: A0A813KE75_POLGL (Hypothetical protein n=3 Tax=Polarella glacialis TaxID=89957 RepID=A0A813KE75_POLGL) HSP 1 Score: 191 bits (485), Expect = 3.660e-50 Identity = 140/420 (33.33%), Postives = 216/420 (51.43%), Query Frame = 2 Query: 578 TLRALFKRTLLPIGFPHTVPPEYLRFLVWYTMQDMSTSIRGFLATQAVFEGMGVGKAGSSSLAATSNWMIRKGAGKIGGLVFTGLFSKSLGANIKGWRLLADVALDLSLTLEMFAACFPKRLLSLICVASVLKAISGVAGGATDAAIVEHFSIHNNIADVTAKGSAQHTVSSLVGMGIAFGFLKVINVSPVVKWATFILLTVEHVLCNLECMRTLALRSLNPARLRVLASNYVD-RLGHLPSSRGQLQAGLVGLPALSLQSTARREDLVTIPWRGWLRRARLLPWGDSLEINLGVRCKSLVEDVDDLLWITDLYRSESIMVGVD--VDYRPLGPKFNTVILAALRRDAGREEQVFVYLLAHLVRRHLLQQSDEIPQGDAVLRKLYLRHVMEVNLRRAKSEWKEFRKALVAEGWDLQRVSL 1828 +L+A LP+G+PH+V EY + W T+Q M + +RG LATQA+ G+GVGK G+++LAAT W+++ G+G +GGL F S N+K WRL ADVA ++ LTL++ A L +ICVA+V KA+ GV+ GAT AA+ HF++ +N+ADV AK +Q T +L+G+ F V N SP W F+LLT+ H N +R+L L +L+P+RL +L +VD + PS+ ++ +++ A E L+++ G A P + +GVR D RS ++ GV+ + R G V+ A L A + ++ +L A L R L +P + L + Y E++ + +F ++ GWDLQR L Sbjct: 72 SLKASLAGAFLPVGYPHSVSKEYFSYQAWDTVQAMCSYLRGVLATQALLRGVGVGKEGATALAATIIWVLKDGSGMVGGLGFATFCSVGFDVNVKTWRLFADVANNVGLTLDLLAPMAGDYFLLVICVANVFKAMCGVSAGATKAALTAHFALRDNMADVQAKEGSQETAVTLMGLIAGSWFAMVANESPATVWTAFVLLTLLHTFANYTGVRSLLLPTLSPSRLWLLCCAWVDSKQASSPSADSRM----------TIEHVASLEPLLSLALPGSRGLAAAGP------VRVGVRWADAFGGED----AEQFDRSWKVLGGVEQYLLARKKGAGTPEVV-AVLLSGADEKVEIRAFLHAALAHRRLCS----VPGSSSWLEESYA----ELS---GRGGIDDFTASVAKLGWDLQRGVL 459
BLAST of mRNA_C-australica_Contig_1004.1.3 vs. uniprot
Match: A0A8J9WIB8_9CHLO (RUS1 family protein C16orf58 homolog n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9WIB8_9CHLO) HSP 1 Score: 187 bits (475), Expect = 4.610e-49 Identity = 136/450 (30.22%), Postives = 214/450 (47.56%), Query Frame = 2 Query: 563 LSGGTTLRALFK---RTLLPIGFPHTVPPEYLRFLVWYTMQDMSTSIRGFLATQAVFEGMGVGKAGSSSLAATSNWMIRKGAGKIGGLVFTGLFSKSLGANIKGWRLLADVALDLSLTLEMFAACFPKRLLSLICVASVLKAISGVAGGATDAAIVEHFSIHNNIADVTAKGSAQHTVSSLVGMGIAFGFLKVINVSPVVKWATFILLTVEHVLCNLECMRTLALRSLNPARLRVLASNYVDRLGHLPSSRGQLQAGLVGLPALSLQST--ARREDLV---TIPWRGWLRRARLLPWGDSLEINLGVRCKSLVEDVDDLLWITDLYRSESIMVGVDVDYRPLGPKFNTVILAALRRDAGREEQVFVYLLAHLVRRHLLQQSDEIPQGDAVLRKLYLRHVMEVNLRRAKSEWKEFRKALVAEGWDLQRVSLSPLPHRGSWGGVLKPRESED 1888 +S G+ ++L + + LP +P +V P+Y+ F +W ++Q + + +RG + + A+ G+GVGK +S L A + +R AG GG++F L A K WRL AD+ + L++ + FP L L C+ S+ +A++GVAGGAT AA+ +HFS N AD++AK +Q T ++LVGM + FL+ SPV WA F+LLTV H+ N+ +R+L L SLN +R+ +L L H +++ V LQ T A+ E L+ + W+ L W S + +G R L ++ L D +++ +D R LRRDA E+ + Y+ +L+ Q D + + EW FR L GW L R++L RG+WG L+ D Sbjct: 31 ISNGSQDQSLLRWLRKGFLPDKYPDSVTPDYIDFQIWDSIQALCSYVRGMICSNAILTGIGVGKEAASPLVAVFQFFLRDLAGMCGGVLFAFAQGSELDAYAKQWRLFADIFNNFGYALDLLSPVFPDHFLLLACLGSLARAVTGVAGGATRAALTQHFSKAGNAADISAKEGSQETATTLVGMVVGMLFLRSAADSPVAVWAVFLLLTVLHIYANVRAVRSLQLTSLNRSRMDIL-------LQHCSATK-------VNGNGRVLQPTEVAKIEPLLPPTVTEFLKWILCVHL--WRPSKRLVIGARLSEL--PLERTLARMDSNADMKLIIALDKSGREAS--------VVLRRDADSEDVLKAYVQGYLLLHSTAPMEQRHRQVDKWMAE----------------EWPAFRGMLQRSGWALDRIALCSSSWRGAWGNALRHHHHHD 438
BLAST of mRNA_C-australica_Contig_1004.1.3 vs. uniprot
Match: A0A6P5RF21_PRUAV (protein root UVB sensitive 3 isoform X1 n=12 Tax=Prunus TaxID=3754 RepID=A0A6P5RF21_PRUAV) HSP 1 Score: 177 bits (450), Expect = 1.430e-45 Identity = 122/435 (28.05%), Postives = 220/435 (50.57%), Query Frame = 2 Query: 572 GTTLRALFKRTL---LPIGFPHTVPPEYLRFLVWYTMQDMSTSIRGFLATQAVFEGMGVGKAGSSSLAATSNWMIRKGAGKIGGLVFTGLFSKSLGANIKGWRLLADVALDLSLTLEMFAACFPKRLLSLICVASVLKAISGVAGGATDAAIVEHFSIHNNIADVTAKGSAQHTVSSLVGMGIAFGFLKVINVSPVVKWATFILLTVEHVLCNLECMRTLALRSLNPARLRVLASNYVDRLGHLPSSRGQLQAGLVGLPALSLQSTARREDLVTIPWRGW-LRRARLLPWGDSLEINLGVRCKSLVE-DVDDLLWITDLYRSESIMVGVDVDYRPLGPKFNTVILAALRRDAGREEQVFVYL--LAHLVRRHLLQQSDEIPQGDAVLRKLYLRHVMEVNLRRAKSEWKEFRKALVAEGWDLQRVSLSPLPHRGSW 1855 G+ +++R L +P GFP +V P+Y+ F VW +Q +ST IR L+TQA+ +GVG+ ++ + AT W +R G +GG++FT +L +N K WRL+AD+ DL + +++ + FP + ++C+ S+ ++ +GVA GAT AA+ +HF++ +N AD++AK +Q TV+++VGM + ++ P+ W +F+ LT+ H+ N +R LAL SLNP R +L +++ R G + LS + ++ E ++ + W L++ L+ + ++LGVR SL ++ DLL + ++ Y + K N I+ A Q F++ +A+L+ +H + S+ D ++EF + L GW +R+ + + +W Sbjct: 41 GSRFHHVWRRILEAFVPEGFPSSVTPDYVPFQVWDLLQGLSTYIRTMLSTQALLGAIGVGEKSATVIGATFQWFLRDLTGMLGGILFTFYQGSNLDSNAKMWRLVADLMNDLGMLMDLLSPLFPSAFVFVVCLGSISRSFTGVASGATRAALTQHFALQSNAADISAKEGSQETVATMVGMALGMLLARITMGHPLAIWFSFLSLTMFHMYANYMAVRCLALNSLNPERCSILLQHFM-RTGQV----------------LSPEQVSKMEHILPVWASSWSLKKTELI----HVRVSLGVRVSSLNHLELRDLLHFAGSHYKKA-------KYLLMERKGNICIVMHKDSTATDVLQSFLHANAMANLIDKHRILHSESQTWMD--------------------KHYEEFIQKLKVSGWKTERLLSPTIVWKANW 427
BLAST of mRNA_C-australica_Contig_1004.1.3 vs. uniprot
Match: A0A7S0AE69_9STRA (Hypothetical protein (Fragment) n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0AE69_9STRA) HSP 1 Score: 177 bits (450), Expect = 7.060e-45 Identity = 99/236 (41.95%), Postives = 148/236 (62.71%), Query Frame = 2 Query: 581 LRALFKRTLLPIGFPHTVPPEYLRFLVWYTMQDMSTSIRGFLATQAVFEGMGVGKAGSSSLAATSNWMIRKGAGKIGGLVFTGLFSKSLGANIKGWRLLADVALDLSLTLEMFAACFPKR-LLSLICVASVLKAISGVAGGATDAAIVEHFSIHNNIADVTAKGSAQHTVSSLVGMGIAFGFLKVINVSP-VVKWATFILLTVEHVLCNLECMRTLALRSLNPARLRVLASNYVDR 1282 +R+ T LP G+PH PP YL + +W QD++T +R LATQ V EG+G GK G+++L+A+ N++ R G G + L+FT + + ++IK WRLLAD+A+D+ +TLE+ A FPK L LI +A++ KA+ GVA GA AI H+S ++I+D+ AK AQHTV+ +G+ A F ++ +P V W + LLT H+ N CMR +A SLN AR +L S + ++ Sbjct: 123 IRSALCSTFLPSGYPHQTPPGYLSYSMWSWAQDLTTQMRAVLATQRVLEGVGAGKEGATALSASLNFIFRDGCGMLATLLFTSVAASKFRSDIKRWRLLADIAVDIGITLEVAAPLFPKTWFLPLISIATMFKAVCGVAAGAAGGAINLHWSRGSDISDINAKFGAQHTVTGGLGLLSAALFATSVSHAPSTVTWLLYALLTAFHIYANARCMRLVAFDSLNTARTDLLTSQFFEQ 358
BLAST of mRNA_C-australica_Contig_1004.1.3 vs. uniprot
Match: A0A024TJI4_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TJI4_9STRA) HSP 1 Score: 172 bits (436), Expect = 1.190e-44 Identity = 98/237 (41.35%), Postives = 136/237 (57.38%), Query Frame = 2 Query: 575 TTLRALFKRTL----LPIGFPHTVPPEYLRFLVWYTMQDMSTSIRGFLATQAVFEGMGVGKAGSSSLAATSNWMIRKGAGKIGGLVFTGLFSKSLGANIKGWRLLADVALDLSLTLEMFAACFPKRLLSLICVASVLKAISGVAGGATDAAIVEHFSIHNNIADVTAKGSAQHTVSSLVGMGIAFGFLKVINVSPVVKWATFILLTVEHVLCNLECMRTLALRSLNPARLRVLASNY 1273 T + L +R L LP G+P +V EYL F +W T Q M + +RG LATQ+V E +GVGK + LAA W++R G+G +GGL F + AN+K WRL ADV D LTL+M A FP + ++CV+SV KA+ GVA GAT +++ HF+ H N+AD+ AK +Q T ++VG+ F +N S W FI LT HV+ N + TL + +LN R + Y Sbjct: 66 TNIVQLLRRELFDMFLPFGYPDSVSDEYLTFQMWDTCQAMCSYLRGVLATQSVLESVGVGKDSVTPLAAALQWVMRDGSGMLGGLFFAYIVGPKFDANVKFWRLYADVINDFGLTLDMLAPFFPLYVTEILCVSSVCKAMCGVAAGATRSSLTAHFAKHENMADIAAKEGSQETFVNMVGLVSGMYFANAVNQSRTTVWMAFIFLTGFHVVANYLAVTTLCIPTLNVQRAYLAIQRY 302
BLAST of mRNA_C-australica_Contig_1004.1.3 vs. uniprot
Match: A0A6P5R639_PRUAV (protein root UVB sensitive 3 isoform X2 n=2 Tax=Prunus TaxID=3754 RepID=A0A6P5R639_PRUAV) HSP 1 Score: 173 bits (439), Expect = 1.360e-44 Identity = 100/305 (32.79%), Postives = 175/305 (57.38%), Query Frame = 2 Query: 572 GTTLRALFKRTL---LPIGFPHTVPPEYLRFLVWYTMQDMSTSIRGFLATQAVFEGMGVGKAGSSSLAATSNWMIRKGAGKIGGLVFTGLFSKSLGANIKGWRLLADVALDLSLTLEMFAACFPKRLLSLICVASVLKAISGVAGGATDAAIVEHFSIHNNIADVTAKGSAQHTVSSLVGMGIAFGFLKVINVSPVVKWATFILLTVEHVLCNLECMRTLALRSLNPARLRVLASNYVDRLGHLPSSRGQLQAGLVGLPALSLQSTARREDLVTIPWRGW-LRRARLLPWGDSLEINLGVRCKSL 1474 G+ +++R L +P GFP +V P+Y+ F VW +Q +ST IR L+TQA+ +GVG+ ++ + AT W +R G +GG++FT +L +N K WRL+AD+ DL + +++ + FP + ++C+ S+ ++ +GVA GAT AA+ +HF++ +N AD++AK +Q TV+++VGM + ++ P+ W +F+ LT+ H+ N +R LAL SLNP R +L +++ R G + LS + ++ E ++ + W L++ L+ + ++LGVR SL Sbjct: 41 GSRFHHVWRRILEAFVPEGFPSSVTPDYVPFQVWDLLQGLSTYIRTMLSTQALLGAIGVGEKSATVIGATFQWFLRDLTGMLGGILFTFYQGSNLDSNAKMWRLVADLMNDLGMLMDLLSPLFPSAFVFVVCLGSISRSFTGVASGATRAALTQHFALQSNAADISAKEGSQETVATMVGMALGMLLARITMGHPLAIWFSFLSLTMFHMYANYMAVRCLALNSLNPERCSILLQHFM-RTGQV----------------LSPEQVSKMEHILPVWASSWSLKKTELI----HVRVSLGVRVSSL 324
BLAST of mRNA_C-australica_Contig_1004.1.3 vs. uniprot
Match: A0A251R4P1_PRUPE (Uncharacterized protein n=1 Tax=Prunus persica TaxID=3760 RepID=A0A251R4P1_PRUPE) HSP 1 Score: 173 bits (438), Expect = 1.410e-44 Identity = 100/304 (32.89%), Postives = 172/304 (56.58%), Query Frame = 2 Query: 572 GTTLRALFKRTL---LPIGFPHTVPPEYLRFLVWYTMQDMSTSIRGFLATQAVFEGMGVGKAGSSSLAATSNWMIRKGAGKIGGLVFTGLFSKSLGANIKGWRLLADVALDLSLTLEMFAACFPKRLLSLICVASVLKAISGVAGGATDAAIVEHFSIHNNIADVTAKGSAQHTVSSLVGMGIAFGFLKVINVSPVVKWATFILLTVEHVLCNLECMRTLALRSLNPARLRVLASNYVDRLGHLPSSRGQLQAGLVGLPALSLQSTARREDLVTIPWRGWLRRARLLPWGDSLEINLGVRCKSL 1474 G+ L++R L +P GFP +V P+Y+ F VW +Q +ST IR L+TQA+ +GVG+ ++ + AT W +R G +GG++FT +L +N K WRL+AD+ DL + +++ + FP + ++C+ S+ ++ +GVA GAT AA+ +HF++ +N AD++AK +Q TV+++VGM + ++ P+ W +F+ LT+ H+ N +R LAL SLNP R +L +++ R G + LS + ++ E ++ + W + L + ++LGVR SL Sbjct: 41 GSRFHHLWRRILEAFVPEGFPSSVTPDYVSFQVWDLLQGLSTYIRTMLSTQALLSAIGVGEKSATVIGATFQWFLRDLTGMLGGILFTFYQGSNLDSNAKMWRLVADLMNDLGMLMDLVSPLFPSAFVFVVCLGSISRSFTGVASGATRAALTQHFALQSNAADISAKEGSQETVATMVGMALGMLLARITMGHPLAIWFSFLSLTMFHMYANYMAVRCLALNSLNPQRCSILLQHFM-RTGQV----------------LSPEQVSKMEHILPVWASSWSSKKTELI---HVRVSLGVRVSSL 324 The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_1004.1.3 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-australica_Contig_1004.1.3 >prot_C-australica_Contig_1004.1.3 ID=prot_C-australica_Contig_1004.1.3|Name=mRNA_C-australica_Contig_1004.1.3|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=628bp MRSGAYAAALHSLLLGTLGPSAPPLFACLRLRGGEQESEGLSGGETFTCEback to top mRNA from alignment at C-australica_Contig_1004:198..3098+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-australica_Contig_1004.1.3 ID=mRNA_C-australica_Contig_1004.1.3|Name=mRNA_C-australica_Contig_1004.1.3|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=2901bp|location=Sequence derived from alignment at C-australica_Contig_1004:198..3098+ (Chrysoparadoxa australica CS_1217)back to top Coding sequence (CDS) from alignment at C-australica_Contig_1004:198..3098+ >mRNA_C-australica_Contig_1004.1.3 ID=mRNA_C-australica_Contig_1004.1.3|Name=mRNA_C-australica_Contig_1004.1.3|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=1884bp|location=Sequence derived from alignment at C-australica_Contig_1004:198..3098+ (Chrysoparadoxa australica CS_1217)back to top |