mRNA_C-australica_Contig_1003.4.1 (mRNA) Chrysoparadoxa australica CS_1217

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-australica_Contig_1003.4.1
Unique NamemRNA_C-australica_Contig_1003.4.1
TypemRNA
OrganismChrysoparadoxa australica CS_1217 (Chrysoparadoxa australica CS_1217)
Homology
BLAST of mRNA_C-australica_Contig_1003.4.1 vs. uniprot
Match: A0A6H5K6F7_9PHAE (Mannosyltransferase n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K6F7_9PHAE)

HSP 1 Score: 469 bits (1207), Expect = 4.670e-147
Identity = 279/625 (44.64%), Postives = 364/625 (58.24%), Query Frame = 1
Query:  106 EKLDVKDELDMKLLLFCILFRVLNALVVRTYFTPDEFWQGPEVAHWLAFGVGHLTWEWKNGGQIRGFAHPLVIAILYKLLQWLGLDSSWAVAHGPKLLQGVAAGVCDYYTFHTALKCFGQRAARWSLFLQLVNWFNFYCMVRPYANSLEAALTSAALCHWTPLWLESNPLIPAPTATSSTSDKAIKAA--KKASEAHYNEVKALLLASLCVAVRPTSAVLWVAVGLFRLANLPLKRWPAYLSL-VVGIVGSIVAISTVVDSFMYGERVFVPLRFLRFNLLEGKSAQFGVQPWHWYLTQQGLPVVLGLALPLAVIGAKKSSADKKKMAWVVAAFVAAHSTSLHKELRFLMPVIPIANVYAGYALAGSTAPPPSFSACFDRASWQALKMPAHLPSKTVQRVVLLSLIALNLPVALYLSLVHQRGPLAIADALQQELSAVTRAR------------------------SKAAHEPSS--RLAIHFLMPCHSTPYYSHVHFPELKGGI-----DLWQLDCSPQCREKGNQSCESGQFQADPLSFVKGAYKSRGL-----------------PDYVVTYDAH------GEELQSWLTKNKFAELSRVFNTQINGDSDSDTTYKNIVLWKR 1809
            ++  ++  L  KLL   + FRVLNALVVRT FTPDEFWQGPE AH LAFG GHLTWEW+   +IRGF HPL+ A LYK LQ LGLD+ WAVAH PKLLQGV AGVCDY  F  AL+ FG  AA W+L  Q+++WFNFYC+VRPY+NS EA L +AAL HW P  L +         +   S  +  AA  ++ S     E +ALLLA+LCVAVRPTSA LW   G+FRL+ LP+KRWP +L+L V+  V ++V  S  +DS +YG    VPL FLRFN+LEGKS  FG QPWHW  +Q GLP VLG ALP A+ G  +   D++++ W+   F+A HS+S HKE RFL+PV+PIA+ YAG A++   A P + +     ++ Q            +   + ++L  L++P A+YLS+ HQ G LA  DA+ + + AV  ++                         K      +   +A+HFLMPCHS P +SH+HF   +GG+      LW LDCSP+ RE    S ES +FQADPL+F+   Y                      PD  V YD H       E L   L     A L   F+  +NGD+DSD T+ N+ + +R
Sbjct:    6 DRRQLRPVLGAKLLAVLVTFRVLNALVVRTSFTPDEFWQGPEPAHLLAFGSGHLTWEWEQTARIRGFTHPLIFAALYKALQILGLDTRWAVAHSPKLLQGVMAGVCDYCAFGLALRAFGAAAAGWALLFQVLSWFNFYCLVRPYSNSAEAVLATAALFHWAPHILSATRKNARGDGSGGDSRDSGAAAVGRRDSMGTRGETRALLLAALCVAVRPTSAALWAVTGMFRLSTLPIKRWPRFLALTVLPPVATVVGASFYLDSKLYGTATLVPLNFLRFNVLEGKSRIFGEQPWHWNFSQ-GLPAVLGAALPPALWGLWRPG-DRRRLGWLALWFLAYHSSSPHKEFRFLLPVLPIAHAYAGQAVSAFLATPATAAGAPAASNRQGXXX--XXXXXRLGTAIAVALFVLHVPAAVYLSVWHQGGALAAVDAVAERVPAVVASKIAXXXXXXXXXXXXXXXXXXXPRLGKGXXXGGAPPEVAVHFLMPCHSAPLHSHLHFRGSEGGLWSGKPSLWSLDCSPKNRELPGGS-ESDKFQADPLAFLLSTYGPLVSGEEQDDDHEATIAVVTPPDLAVMYDTHLARPGVAEYLSGRLGLVPTAVL---FHAHVNGDADSDDTHSNVHVLER 622          
BLAST of mRNA_C-australica_Contig_1003.4.1 vs. uniprot
Match: A0A835YR88_9STRA (Mannosyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YR88_9STRA)

HSP 1 Score: 427 bits (1098), Expect = 2.240e-130
Identity = 271/641 (42.28%), Postives = 343/641 (53.51%), Query Frame = 1
Query:  130 LDMKLLLFCILFRVLNALVVRTYFTPDEFWQGPEVAHWLAFGVGHLTWEWKNGGQIRGFAHPLVIAILYKLLQWLGLDSSWAVAHGPKLLQGVAAGVCDYYTFHTALKCFGQRAARWSLFLQLVNWFNFYCMVRPYANSLEAALTSAALCHWTPLWLESNPLIPAPTATSSTSDKAIKAAKKASE---------AHYNEVKALLLASLCVAVRPTSAVLWVAVGLFRLANLP----LKRWPAYLSLVVGIVGSIVAISTVVDSFMYGERVFVPLRFLRFNLLEGKSAQFGVQPWHWYLTQQGLPVVLGLALPLAVIGAKKSSADK------KKMAWVVAAFV---AAHSTSLHKELRFLMPVIPIANVYAGYALA----------GS-----TAPPPSFSACFDRASWQALKMPAHLPSKTVQRVVLLSLIALNLPVALYLSLVHQRGPLAIADALQQELSA----------VTRARSKAAHEPSSRLAIHFLMPCHSTPYYSHVHFPELKGGIDLWQLDCSPQCREKGNQSCESGQFQADPLSFVKGAYKS----------------------------------RGLPDYVVTYDAHGEELQSWLTKNKFAELSRVFNTQINGDSDSDTTYKNIVLWKR 1809
            ++ KLL   I +R++NAL+VRT+FTPDEFWQGPEVAHWLAFG GHLTWEW+ G +IRGF HPL+ A LY+LL  L +D++WAVAHGPKLLQ VAAG CDY+T   A K FG  AA W+L LQ+V+WFNFYC+ RPY+NSLEAALT AAL  WTP           P  + S                       A   E  ALLLA+LCVA RPTSA LW A G  RLA LP    L R+ A  +    +VG ++  S  +D  +YG  V V   FL+FN+L G SA FGVQPWHW L  QGLP VLG  LPL ++GA  S +           AWV A  +   A HS S HKE RFL+PV+P+A+V AG AL           G      T  PP             L+  A L +         +LI  +LP+ALYLS VHQRGPLAI + LQ ELSA                         +++ FLMPCH+TP +SH+H         L  LDCSP    +  +  ES + ++D    ++  Y                                    R LP YVVT+ AH    ++WL +  + E +RVFNT ++GD+D+   + +++L KR
Sbjct:    6 INYKLLACLIAYRLVNALIVRTHFTPDEFWQGPEVAHWLAFGQGHLTWEWQEGARIRGFLHPLLFAALYRLLALLSIDTAWAVAHGPKLLQAVAAGACDYFTHGLAAKLFGTGAAAWALLLQVVSWFNFYCLCRPYSNSLEAALTIAALYFWTP-----------PRGSGSXXXXXXXXXXXXXXXXXXXXXXXAQPGERLALLLAALCVAARPTSAALWAAAGARRLAALPRAALLPRYAARTA--APVVGGVLLASAALDRLLYGRWVCVAWEFLKFNVLSGGSAAFGVQPWHW-LFSQGLPAVLGATLPLFLLGAYNSFSGSGXXXXXXXAAWVPALVLWHTAVHSVSAHKEFRFLLPVLPLAHVCAGRALQLLVLRRGRHDGEHSTLLTPLPPIXXXXXXXRQRTQLQRRARLTAA--------ALILAHLPLALYLSTVHQRGPLAIMEVLQAELSADDAXXXXXXXXXXXXXXXXXXXXXPVSVLFLMPCHTTPLHSHLHAHAPAPPRALRFLDCSP----RAPRPTESDRLESDTEGLLRDLYSGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRQLPRYVVTFPAHAAAARAWLERRGYVERARVFNTHVSGDADAPAAHAHVLLLKR 620          
BLAST of mRNA_C-australica_Contig_1003.4.1 vs. uniprot
Match: A0A329T462_9STRA (Mannosyltransferase n=1 Tax=Phytophthora cactorum TaxID=29920 RepID=A0A329T462_9STRA)

HSP 1 Score: 352 bits (902), Expect = 1.090e-104
Identity = 205/562 (36.48%), Postives = 298/562 (53.02%), Query Frame = 1
Query:  163 FRVLNALVVRTYFTPDEFWQGPEVAHWLAFGVGHLTWEWKNGGQIRGFAHPLVIAILYKLLQWLGLDSSWAVAHGPKLLQGVAAGVCDYYTFHTALKCFGQRAARWSLFLQLVNWFNFYCMVRPYANSLEAALTSAALCHWTPLWLESNPLIPAPTATSSTSDKAIKAAKKASEAHYNEVKALLLASLCVAVRPTSAVLWVAVGLFRLANLPLKRWPAYLSLVVGIVGSIVAISTV----VDSFMYGERVFVPLRFLRFNLLEGKSAQFGVQPWHWYLTQQGLPVVLGLALPLAVIGAKKSSADKKKMAWVVAAFVAAHSTSLHKELRFLMPVIPIANVYAGYALAGSTAPPPSFSACFDRASWQALKMPAHLPSKTVQRVVLLSLIALNLPVALYLSLVHQRGPLAIADALQQELSAVTRARSKAAHEPSSRLAIHFLMPCHSTPYYSHVHFPELKGGIDLWQLDCSPQCREKGNQSCESGQFQADPLSFVKGAYK---------SRGLPDYVVTYDAHGEELQSWLTKNKFAELSRVFNTQINGDSDSDTTYKNIVLWKR 1809
            FR+ NAL VRT F PDE+WQ  EVAH L FG G+LTWEW++  Q+RGFAHP + A LYKLL+ L LDS WAVA+GP+L+QG+ +   D++ +  A      +AA+W+L  Q  +WF FY MVRP++N +E   T+AAL +W   +LE              +D A    ++      N   AL+LA+L V  RPT+A++W+  G+         R  AYL  + G+V  I  ++T+    +D   YGE  FVP  F +FN+LEGK   +G  PW WY +Q G P ++G  LP+ + G     + KK +  V+   +  +S + HKE RF++P++P A VYAGY L         +    +R  W  L            R+ + S+I  N+  A YLS  HQR P+ + D L   +            + +   +IHF  PCH+TPYYS++H       + +W  DCSP  RE+  + CES Q + DP  F+   Y          S G P YVVTY      ++  L    F E +   ++ ++GD+DS      ++++KR
Sbjct:   18 FRLWNALFVRTSFNPDEYWQSTEVAHRLVFGYGYLTWEWQDDAQLRGFAHPALFAGLYKLLELLNLDSRWAVAYGPRLMQGLISAANDFFLYKLARNYVDAKAAKWALLCQFFSWFTFYVMVRPFSNCVETLCTTAALAYWPWKFLEDG--------ADKKNDDAAPVKRR------NRALALVLAALGVLFRPTNAIIWLYPGIVHFLQ---TRDHAYL--MFGLVMPIAIVTTLTMLCIDRLGYGEWTFVPFNFFKFNVLEGKDKLYGEHPWSWYFSQ-GYPAIVGTTLPIVIAGYLTVPSSKKDLGRVIMWALFVYSNATHKEFRFVLPLLPPAFVYAGYCLRNLERK--LYVQFRERTQWNLL------------RLAVFSVIVPNVLSAYYLSRSHQRAPVEVMDYLADRI------------QENPEASIHFWTPCHATPYYSYLH-----QNVSMWFPDCSPANRER-TEGCESHQLERDPRHFLTKLYHLDDVASDSLSLGPPTYVVTYSTIAARIRPLLVNTNFVEAASFLHSDVSGDADSSEVVSKMLVYKR 527          
BLAST of mRNA_C-australica_Contig_1003.4.1 vs. uniprot
Match: A0A225WAQ7_9STRA (Mannosyltransferase n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WAQ7_9STRA)

HSP 1 Score: 345 bits (886), Expect = 2.110e-102
Identity = 203/566 (35.87%), Postives = 297/566 (52.47%), Query Frame = 1
Query:  163 FRVLNALVVRTYFTPDEFWQGPEVAHWLAFGVGHLTWEWKNGGQIRGFAHPLVIAILYKLLQWLGLDSSWAVAHGPKLLQGVAAGVCDYYTFHTALKCFGQRAARWSLFLQLVNWFNFYCMVRPYANSLEAALTSAALCHWTPLWLESNPLIPAPTATSSTSDKAIKAAKKASEAHYNEVKALLLASLCVAVRPTSAVLWVAVGLFRLANLPLKRWPAYLSLVVGIVGSIVAISTVV----DSFMYGERVFVPLRFLRFNLLEGKSAQFGVQPWHWYLTQQGLPVVLGLALPLAVIGAKKSSADKKKMAWVVAAFVAAHSTSLHKELRFLMPVIPIANVYAGYALAGSTAPPPSFSACFDRASWQALKMPAHLPSKTVQRVVLLSLIALNLPVALYLSLVHQRGPLAIADALQQELSAVTRARSKAAHEPSSRLAIHFLMPCHSTPYYSHVHFPELKGGIDLWQLDCSPQCREKGNQSCESGQFQADPLSFVKGAYKSRG-------------LPDYVVTYDAHGEELQSWLTKNKFAELSRVFNTQINGDSDSDTTYKNIVLWKR 1809
            FR+ NAL VRT F PDE+WQ  EVAH L FG G+LTWEW++  Q+RGFAHP + A LYKLL  L LDS WAVA+GP+LLQG+ +   DY+ +  A   F  +AA+W+L  QL++WF FY MVRP++N +E   T+AAL +W   +LE         +     D  +K + +          AL  A+L V  RPT+A++W+  G+         +   +  L+ G V  I  ++T++    D   YGE  FVP  F +FN+LEGK   +G  PW WY +Q G P ++G  LP+ + G     A KK +   +   +  +S + HKE RF++P++P A VYAGY L         +    +R  W  L            R+ + S+I  N+  A YLS  HQR P+ + D L   +            + +   +IHF  PCH+TPYYS++H       + +W  DCSP  RE+  + CES QF+ DP  F+   Y+                LP Y VTY     +++  L    F E +   ++ ++GD+DS     +++++KR
Sbjct:   15 FRLWNALFVRTSFNPDEYWQSTEVAHRLVFGYGYLTWEWQDDAQLRGFAHPALFAGLYKLLALLNLDSRWAVAYGPRLLQGLLSAANDYFLYKLARNYFDAKAAKWALLCQLLSWFTFYVMVRPFSNCVETLCTTAALAYWPWKFLEDGA-----DSKKQDDDTPLKRSSR--------TVALTFAALGVLFRPTNAIIWLYPGIVHFF-----QSHDHAQLMFGGVVPIAIVTTLIMLCIDHLGYGEWTFVPFNFFKFNVLEGKGKFYGEHPWSWYFSQ-GYPAIVGTTLPIMIAGYLTVPASKKDLGRTIMWALFVYSNAAHKEFRFVLPLLPPAFVYAGYCLRNLEQK--LYVQFRERTQWNLL------------RLAVFSIIVPNVLSAYYLSRTHQRAPVEVMDYLADRI------------QENPEASIHFWTPCHATPYYSYLH-----QNVSMWFPDCSPANRER-TEGCESHQFERDPRQFLSKLYRLSPTDGLDNDPSSLMELPTYAVTYSTVATKIRPLLADTHFVEAASFQHSDVSGDADSSEVVSSMLVYKR 529          
BLAST of mRNA_C-australica_Contig_1003.4.1 vs. uniprot
Match: G4YH05_PHYSP (Mannosyltransferase n=3 Tax=Phytophthora TaxID=4783 RepID=G4YH05_PHYSP)

HSP 1 Score: 345 bits (885), Expect = 3.200e-102
Identity = 205/564 (36.35%), Postives = 299/564 (53.01%), Query Frame = 1
Query:  163 FRVLNALVVRTYFTPDEFWQGPEVAHWLAFGVGHLTWEWKNGGQIRGFAHPLVIAILYKLLQWLGLDSSWAVAHGPKLLQGVAAGVCDYYTFHTALKCFGQRAARWSLFLQLVNWFNFYCMVRPYANSLEAALTSAALCHWTPLWLESNPLIPAPTATSSTSDKAIKAAKKASEAHYNEVKALLLASLCVAVRPTSAVLWVAVGLFRLANLPLKRWPAYLSLVVGIVGSIVAISTV----VDSFMYGERVFVPLRFLRFNLLEGKSAQFGVQPWHWYLTQQGLPVVLGLALPLAVIGAKKSSADKKKMAWVVAAFVAAHSTSLHKELRFLMPVIPIANVYAGYALAGSTAPPPSFSACFDRASWQALKMPAHLPSKTVQRVVLLSLIALNLPVALYLSLVHQRGPLAIADALQQELSAVTRARSKAAHEPSSRLAIHFLMPCHSTPYYSHVHFPELKGGIDLWQLDCSPQCREKGNQSCESGQFQADPLSFVKGAY------------KSRGLPDYVVTYDAHGEELQSWLTKNKFAELSRVFNTQINGDSDSDTTYKNIVLWK 1806
            FR+ +AL VRT F PDE+WQ  EVAH + FG GHLTWEW++  Q+RGFAHP + A LYKLL  L LDS WAVA+GP+LLQG+ +   DY+ +  A   F  +AA+W+L  QL +WF FY MVRP++N +E   T+AAL +W   +LE+        A    +D A    +       N   AL  A+L V  RPT+A++W+  G+         R  A+L  + G+V  I  ++++    +D   YGE  FVPL F +FN+LEGK   +G  PW WY +Q G P ++G  LP+ + G     A KK +   +   +  +S + HKE RF++P++P A VYAGY L         +    +R  W  L++ A             S+I  N+  A YLS  HQR P+ + D L   +            + +   +IHF  PCH+TPYYS++H       + +W  DCSP  RE+  +  +S Q + DP  F+   Y             S  LP YVVTY     +++  L    +AE +   ++ ++GD+DS     N++++K
Sbjct:   18 FRLWSALFVRTSFNPDEYWQSTEVAHRMVFGYGHLTWEWQDDAQLRGFAHPALFAGLYKLLALLNLDSRWAVAYGPRLLQGLLSAANDYFLYKLARTYFDAKAAKWALLCQLFSWFTFYVMVRPFSNCVETLCTTAALAYWPWKFLEN-------VAEKKKNDDAAPVNRS------NRTLALTFAALGVLFRPTNAIIWLYPGIVHFFQ---TRDRAHL--IFGVVLPIALVTSLAMLCIDRLGYGEWTFVPLNFFKFNVLEGKDKLYGEHPWSWYFSQ-GYPAIVGTTLPIVIAGYLTVPAPKKDLGHTIMWALFVYSNAAHKEFRFVLPLLPPAFVYAGYCLRNLERK--LYVQFHERTQWNLLRIAAF------------SVIVPNVLSAYYLSRNHQRAPVEVMDYLADRI------------QENPETSIHFWAPCHATPYYSYLH-----QNVSMWFPDCSPVNRER-TEGSDSQQLERDPRHFLTKLYHLSPSDDQASDPSSMKLPTYVVTYSTIAAKIKPLLAAAHYAEDASFVHSDVSGDADSSEVVSNMLVYK 530          
BLAST of mRNA_C-australica_Contig_1003.4.1 vs. uniprot
Match: A0A5D6XG16_9STRA (Mannosyltransferase (Fragment) n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XG16_9STRA)

HSP 1 Score: 341 bits (875), Expect = 4.280e-101
Identity = 207/560 (36.96%), Postives = 301/560 (53.75%), Query Frame = 1
Query:  163 FRVLNALVVRTYFTPDEFWQGPEVAHWLAFGVGHLTWEWKNGGQIRGFAHPLVIAILYKLLQWLGLDSSWAVAHGPKLLQGVAAGVCDYYTFHTALKCFGQRAARWSLFLQLVNWFNFYCMVRPYANSLEAALTSAALCHWTPLWLESNPLIPAPTATSSTSDKAIKAAKKASEAHYNEVKALLLASLCVAVRPTSAVLWVAVGLFRLANLPLKRWPAYLSLVVGIVGSIVAISTVVDSFMYGERVFVPLRFLRFNLLEGKSAQFGVQPWHWYLTQQGLPVVLGLALPLAVIGAKKSSADKKKMAWVVAAFVAAHSTSLHKELRFLMPVIPIANVYAGYALAGSTAPPPSFSACFDRASWQALKMPAHLPSKTVQRVVLLSLIALNLPVALYLSLVHQRGPLAIADALQQELSAVTRARSKAAHEPSSRLAIHFLMPCHSTPYYSHVHFPELKGGIDLWQLDCSPQCREKGNQSCESGQFQADPLSFVKGAYK-------SRG---LPDYVVTYDAHGEELQSWLTKNKFAELSRVFNTQINGDSDSDTTYKNIVLWKRS 1812
            FRV NAL VRT F+PDE+WQ  EVAH LAFG GHL         IRGFAHP + A+LYK L  LGLDS WAVA+GP++LQGV + + DY+ +  A   F  R+A+W+L   L +WF FY MVRP++NS+E   T+ A  +W   +L +        +T+   D    A     ++H   V AL LA+L V  RPTSAV+W+  G+  L      R       V+ I G  +A   ++D + YGE  FVP  FL+FN+LEGK + +GV+PW WY TQ G P ++G ALPL V G       KK +   +   +  +S + HKE RF++P++P A VYAGY              C      +          + + R+   S++  NL VA YLS  HQR P+ + D L + +             P S  +IHF  PCH+TPYYS++H       + +W  DCSP  RE     CES Q + DP+ F++  Y+       S G   LP++VV +    +++ + L +  +   +  F++ ++GD+D+      +++++R+
Sbjct:    3 FRVWNALFVRTTFSPDEYWQSTEVAHRLAFGYGHLC--------IRGFAHPGLFALLYKALALLGLDSRWAVAYGPRILQGVLSALNDYFLYRLARAYFDLRSAKWALLAHLFSWFIFYVMVRPFSNSIETVCTTGAFAYWPWKFLHAE-------STAGKKDWPATAEDPMKQSH--RVLALSLAALGVLFRPTSAVIWLYPGVLHLLQTH-DRGVLLAFQVLPIAGVTLAAMLLIDRWGYGEWTFVPFNFLKFNVLEGKDSLYGVKPWGWYFTQ-GFPAIIGTALPLTVAGFLTVPGLKKDLGHTILWAIFLYSNTAHKEFRFVLPLLPPAFVYAGY--------------CIRNLENRLFVQLHERTQRNLLRLAAFSIVVPNLAVAFYLSRTHQRAPVEVMDFLHERIQG----------RPES--SIHFWTPCHATPYYSYLH-----QNVSMWFPDCSPNNRELPG-GCESHQLENDPVLFLRSRYQFSASDGDSTGRETLPEFVVLFAPTAKKIDALLDRAHYVAEASFFHSDVSGDADNPEVLDKMLVYRRA 511          
BLAST of mRNA_C-australica_Contig_1003.4.1 vs. uniprot
Match: K3W7V1_GLOUD (Mannosyltransferase n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3W7V1_GLOUD)

HSP 1 Score: 341 bits (874), Expect = 4.800e-101
Identity = 201/533 (37.71%), Postives = 287/533 (53.85%), Query Frame = 1
Query:  163 FRVLNALVVRTYFTPDEFWQGPEVAHWLAFGVGHLTWEWKNGGQIRGFAHPLVIAILYKLLQWLGLDSSWAVAHGPKLLQGVAAGVCDYYTFHTALKCFGQRAARWSLFLQLVNWFNFYCMVRPYANSLEAALTSAALCHWTPLWLESNPLIPAPTATSSTSDKAIKAAKKASEAHYNEVKALLLASLCVAVRPTSAVLWVAVGLFRLANLPLKRWPAYLSLVVGIVGSIVAISTVVDSFMYGERVFVPLRFLRFNLLEGKSAQFGVQPWHWYLTQQGLPVVLGLALPLAVIGAKKSSADKKKMAWVVAAFVAAHSTSLHKELRFLMPVIPIANVYAGYALAGSTAPPPSFSACFDRASWQALKMPAHLPSKTVQRVVLLSLIALNLPVALYLSLVHQRGPLAIADALQQELSAVTRARSKAAHEPSSRLAIHFLMPCHSTPYYSHVHFPELKGGIDLWQLDCSPQCREKGNQSCESGQFQADPLSFVKGAYKSRG----------LPDYVVTYDAHGEELQSWLTKNKFAEL 1731
            FRV NAL VRT F PDEFWQ  EVAH + FG GHLTWEW++  +IRGFAHP +  +LYK L  L LDS WAVA+GP++LQG+ + + DY+ +  A   F +R+A+W+L   L +WF FY MVRP++NS+E   T+ AL +W   +LE            S+  + +   KK+     N V AL LA+L V  RPT+A++WV  GL  L      R    L  V+ I  + +A   V+D + YGE  FVP  F++FN+LEGK   +G QPW+WY+ Q G P ++G ALPLA+ G       KK +  ++   +  +S + HKE RF++P++P A VYAGY              C      +            + R+ + +++  N+  A YLS  HQR P+ + D L Q +             PS+  +IHF  PCH+TPYYS++H       + +W  DCSP  RE    S ES + + DP++F+   Y              LP+YVV Y    + +   L +  + E+
Sbjct:   21 FRVWNALFVRTAFNPDEFWQSTEVAHRMVFGYGHLTWEWQSDAKIRGFAHPGLFVLLYKALALLNLDSRWAVAYGPRILQGLLSALNDYFLYRLACVYFDRRSAKWALLCNLFSWFIFYAMVRPFSNSIETVCTTGALAYWPWKFLEGE----------SSKKENVDPMKKS-----NRVLALTLAALGVLFRPTNAIIWVYPGLLHLIQAH-DRTNLVLFNVLPIAIATLAAMLVIDRWGYGEWTFVPYNFVKFNVLEGKDKLYGTQPWNWYVAQ-GFPAIIGSALPLAMAGFLTVPGLKKDLGHIIIWALFLYSNAAHKEFRFVLPLLPPALVYAGY--------------CIRNLENKLYVQFRERTQSNLLRLAVFTVVVPNIAAAYYLSRWHQRAPVEVMDFLHQRIQ----------ENPST--SIHFWTPCHATPYYSYLH-----QNVSMWFPDCSPAGRELPEGS-ESQRLERDPVAFLSSKYHFSASSSQDATHEKLPEYVVMYSPTAKTIDDLLDRAHYLEV 504          
BLAST of mRNA_C-australica_Contig_1003.4.1 vs. uniprot
Match: A0A200QZ42_9MAGN (Mannosyltransferase n=1 Tax=Macleaya cordata TaxID=56857 RepID=A0A200QZ42_9MAGN)

HSP 1 Score: 343 bits (880), Expect = 1.460e-100
Identity = 210/547 (38.39%), Postives = 303/547 (55.39%), Query Frame = 1
Query:  154 CILFRVLNALVVRTYFTPDEFWQGPEVAHWLAFGVGHLTWEWKNGGQIRGFAHPLVIAILYKLLQWLGLDSSWAVAHGPKLLQGVAAGVCDYYTFHTALKCFGQRAARWSLFLQLVNWFNFYCMVRPYANSLEAALTSAALCHWTPLWLESNPLIPAPTATSSTSDKAIKAAKKASEAHYNEVK---ALLLASLCVAVRPTSAVLWVAVGLFRLANLPLKRWPAYLSLVVGIVGSIV-AISTVVDSFMYGERVFVPLRFLRFNLLEGKSAQFGVQPWHWYLTQQGLPVVLGLALPLAVIGAKKSSADKK--KMAWVVAAFVAAHSTSLHKELRFLMPVIPIANVYAGYALAGSTAPPPSFSACFDRASWQALKMPAHLPSKTVQRVV--LLSLIALNLPVALYLSLVHQRGPLAIADALQQELSAVTRARSKAAHEPSSRLAIHFLMPCHSTPYYSHVHFPELKGGIDLWQLDCSPQCREKGNQSCESGQFQADPLSFVKGAYKSRGLPDYVVTYDAHGEELQSWLTKNKFAELSRVFNTQINGDSD 1770
            C++FR+ N+++V+TYF PDE WQ  EVAH +AFG GHLTWEW  G  IR + HP+V   LYK+L + GLD+ W +   P+LLQ V + V D+Y +  A + FG+  A+W+LF QL NWF F+C  R  +N+LE  LT  +L +W P + +S+                          H++ V     L++A+L  AVRPTSA+ W+ VGL  L     +    ++ L V  +G +V A + ++D FMYG  +FVPL FL+FN L      +G   WHWY TQ G PV+L   +P ++ G  +S   K    MAWV+  +    S   HKE RF++PV+PIA +++GY+LA   AP    +           K+P++L ++   R+   +  L+A NLP+ALY+SLVHQRG     DA+           SK A +   + +I FLMPCH+TPYYS +H       + +  LDCSP   E      ES +F  DP+ FV    K   LP ++V YD+  ++L+ +LT + F E+ R F+     D D
Sbjct:   46 CLVFRMANSMLVQTYFNPDEHWQALEVAHRIAFGYGHLTWEWAKG--IRSYLHPMVFVFLYKILAFFGLDTPWFMMRAPRLLQSVLSSVGDFYLYKLAHRMFGEHVAQWTLFSQLTNWFTFFCFTRTLSNNLETVLTLISLYYW-PSFRDSS-------------------------RHFSVVSRKWGLVVAALACAVRPTSAITWLYVGLLELFETHDRM--KFIFLEVAPIGFLVLAFTCLLDWFMYGSWIFVPLNFLKFNFLSSGGDYYGTHKWHWYFTQ-GFPVMLFTFIPFSMAGIFQSKQWKLFGLMAWVLGLY----SVLGHKEFRFVLPVLPIALMFSGYSLAAMEAPDSKDN---------KRKVPSNLRTRCPSRMQFGIFFLLATNLPMALYMSLVHQRGS---EDAMNF--------LSKEALDGKVK-SILFLMPCHATPYYSTLH-----RNLPMHFLDCSPS--ENRGIPDESDRFMMDPVGFVSDMVKDWSLPSHIVLYDSEEKQLKDFLTSHSFREIKRFFHAHFKVDRD 529          
BLAST of mRNA_C-australica_Contig_1003.4.1 vs. uniprot
Match: A0A7J7CWK4_TRIWF (Mannosyltransferase n=2 Tax=Tripterygium wilfordii TaxID=458696 RepID=A0A7J7CWK4_TRIWF)

HSP 1 Score: 338 bits (868), Expect = 9.460e-100
Identity = 210/542 (38.75%), Postives = 301/542 (55.54%), Query Frame = 1
Query:  154 CILFRVLNALVVRTYFTPDEFWQGPEVAHWLAFGVGHLTWEWKNGGQIRGFAHPLVIAILYKLLQWLGLDSSWAVAHGPKLLQGVAAGVCDYYTFHTALKCFGQRAARWSLFLQLVNWFNFYCMVRPYANSLEAALTSAALCHWTPLWLESNPLIPAPTATSSTSDKAIKAAKKASEAHYNEVKALLLASLCVAVRPTSAVLWVAVGLFRLANLPLKRWPAYLSLVVGIVGSIVAISTVVDSFMYGERVFVPLRFLRFNLLEGKSAQFGVQPWHWYLTQQGLPVVLGLALPLAVIGAKKSSADKKKMAWVVAAFVAAHSTSLHKELRFLMPVIPIANVYAGYALA---GSTAPPPSFSACFDRASWQALKMPAHLPSKTVQRVVLLSLIALNLPVALYLSLVHQRGPLAIADALQQELSAVTRARSKAAHEPSSRLAIHFLMPCHSTPYYSHVHFPELKGGIDLWQLDCSPQCREKGNQSCESGQFQADPLSFVKGAYKSRGLPDYVVTYDAHGEELQSWLTKNKFAELSRVFNTQINGDSD 1770
            C++FR++N+L+V+TYF PDE WQ  EVAH L FG GHLTWEWK G  IR + HP++ A+LYK L  LGLD+ W +   P++LQ V + VCD+Y +  +   FG   A+W+L  QL NWF F+C+ R  +NSLE  LT  AL +W P +  S+  +      SS S K                 AL LA+   A+RPTSA++W+ VGL  L  +   R    +  VV I   ++    ++D  MYG  + VPL FL+FN L      +G   WHWY TQ G P ++   LP  + G  KS   + K+  +VA  +  +S   HKE RF++PV+P+  +++GY+LA    S+AP        D    + LK+PA  P K   +  +  L+A N+P+ALY+SLVHQRG   + + L +E      AR++         ++ FLMPCH+TPYYS +H       + +  LDCSP   E+G Q  ES QF  +P+ F     ++  LP +VV +D+    L+ +LT + F E+ R F+  I  D D
Sbjct:   44 CLVFRIVNSLLVQTYFNPDEHWQALEVAHRLVFGYGHLTWEWKKG--IRSYLHPMIFALLYKFLVLLGLDTPWFMMRAPRMLQSVFSAVCDFYLYKLSYVIFGGHVAKWTLLSQLGNWFMFFCLNRTLSNSLETVLTVVALYYW-PCFTGSSHKV------SSNSRK----------------WALALAAFACAIRPTSAIIWIYVGLLELF-VAHDRLRFVILEVVPIGALVLGAVCLLDRLMYGSWILVPLNFLKFNFLSAGGDYYGTHKWHWYFTQ-GFPAMVFTFLPFFIAGVVKSK--QWKLFGLVAWVLITYSLLGHKEFRFVLPVLPLVLMFSGYSLAVMERSSAP--------DGKRRRFLKIPAKWPPK--MQFAIFFLLATNIPMALYMSLVHQRGTEDVMNYLSKE------ARNERVK------SVLFLMPCHATPYYSSLHC-----NLPMRFLDCSPS-EERGIQD-ESDQFMNNPIGFASEYARNWSLPSHVVLFDSEERLLRGFLTSHSFKEIRRFFHAHIKVDRD 527          
BLAST of mRNA_C-australica_Contig_1003.4.1 vs. uniprot
Match: UPI0005401BF2 (GPI mannosyltransferase 3 n=1 Tax=Beta vulgaris subsp. vulgaris TaxID=3555 RepID=UPI0005401BF2)

HSP 1 Score: 338 bits (867), Expect = 1.350e-99
Identity = 216/544 (39.71%), Postives = 299/544 (54.96%), Query Frame = 1
Query:  154 CILFRVLNALVVRTYFTPDEFWQGPEVAHWLAFGVGHLTWEWKNGGQIRGFAHPLVIAILYKLLQWLGLDSSWAVAHGPKLLQGVAAGVCDYYTFHTALKCFGQRAARWSLFLQLVNWFNFYCMVRPYANSLEAALTSAALCHWTPLWLESNPLIPAPTATSSTSDKAIKAAKKASEAHYNEVKALLLASLCVAVRPTSAVLWVAVGLFRL--ANLPLKRWPAYLSLVVGIVGSIV-AISTVVDSFMYGERVFVPLRFLRFNLLEGKSAQFGVQPWHWYLTQQGLPVVLGLALPLAVIGAKKSSADKKK--MAWVVAAFVAAHSTSLHKELRFLMPVIPIANVYAGYALAGSTAPPPSFSACFDRASWQALKMPAHLPSKTVQRVVLLSLIALNLPVALYLSLVHQRGPLAIADALQQELSAVTRARSKAAHEPSSRLAIHFLMPCHSTPYYSHVHFPELKGGIDLWQLDCSPQCREKGNQSCESGQFQADPLSFVKGAYKSRGLPDYVVTYDAHGEELQSWLTKNKFAELSRVFNTQINGDSD 1770
            C+  R+LN+LVV+TYF PDE WQ  EVAH L FG GHLTWEWK G  IR + HPL+ A+LYK+L +L LD+ W +   P+LLQ V A VCD Y +  +   FG + ARW+LF  L NWF F+C  R  +NSLEA LT  +L +W  + + S  +       SS+S +                 AL +A+L  AVRPTSA++W+ VG   L  A+  LK    ++ L    +G++V AI++++D  +YG  V VPL FL+FN L      +G  PWHWY TQ G PV+L   LP  V G   S   +    + WVV  +    S   HKE RF++PV+PIA +++GY+LA   +P         RAS    K P+ L      R+ +  L+A N+P+ LY+SLVHQRG     DA+         AR   + E  S L   FL PCH+TPYYS +H       + +  LDC+P   E+     ES +F  DP  F     K+  LP ++V +D+  ++L+ +L  N F E+ R F++    D D
Sbjct:   44 CVGVRMLNSLVVQTYFNPDEHWQSLEVAHRLVFGYGHLTWEWKRG--IRSYLHPLLFALLYKILAFLHLDTPWLMMKAPRLLQSVFAAVCDLYLYKFSNMIFGNQVARWTLFSHLTNWFVFFCCTRTLSNSLEAVLTVVSLYYWPCMRVSSGKM-------SSSSRR----------------WALAVAALACAVRPTSAIVWLYVGFVELLMASDKLK----FIFLEAAPIGAVVFAITSLLDCMIYGSWVIVPLNFLKFNFLSSGGDYYGTHPWHWYFTQ-GFPVMLFTFLPFCVAGVIYSKCWRLSGLIGWVVGMY----SVLGHKEFRFVLPVLPIALMFSGYSLAALKSPDLPMGKS-KRASTTHTKWPSKL------RLAVFFLLATNIPMGLYMSLVHQRGS---EDAMHY------LAREALSGEVRSVL---FLTPCHATPYYSALH-----QNLPMRFLDCTPS--EQRGTPDESDRFLLDPYGFASEFAKNWSLPSHIVLFDSEEKKLKDFLNSNSFTEVKRFFHSHFKVDRD 527          
The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_1003.4.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K6F7_9PHAE4.670e-14744.64Mannosyltransferase n=2 Tax=Ectocarpus TaxID=2879 ... [more]
A0A835YR88_9STRA2.240e-13042.28Mannosyltransferase n=1 Tax=Tribonema minus TaxID=... [more]
A0A329T462_9STRA1.090e-10436.48Mannosyltransferase n=1 Tax=Phytophthora cactorum ... [more]
A0A225WAQ7_9STRA2.110e-10235.87Mannosyltransferase n=1 Tax=Phytophthora megakarya... [more]
G4YH05_PHYSP3.200e-10236.35Mannosyltransferase n=3 Tax=Phytophthora TaxID=478... [more]
A0A5D6XG16_9STRA4.280e-10136.96Mannosyltransferase (Fragment) n=1 Tax=Pythium bra... [more]
K3W7V1_GLOUD4.800e-10137.71Mannosyltransferase n=1 Tax=Globisporangium ultimu... [more]
A0A200QZ42_9MAGN1.460e-10038.39Mannosyltransferase n=1 Tax=Macleaya cordata TaxID... [more]
A0A7J7CWK4_TRIWF9.460e-10038.75Mannosyltransferase n=2 Tax=Tripterygium wilfordii... [more]
UPI0005401BF21.350e-9939.71GPI mannosyltransferase 3 n=1 Tax=Beta vulgaris su... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-australica_Contig_1003contigC-australica_Contig_1003:1819..7006 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Chrysoparadoxa australica CS_1217 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FX48
Preferred namePIGB
PFAMsGlyco_transf_22
Model size3915
Max annot lvl2759|Eukaryota
KEGG rclassRC00054,RC00083
KEGG koko:K00286,ko:K05286,ko:K17341
KEGG ReactionR01248,R01251,R03291,R03293,R05922
KEGG Pathwayko00330,ko00563,ko01100,ko01110,ko01130,ko01230,map00330,map00563,map01100,map01110,map01130,map01230
KEGG ModuleM00015,M00065
Hectar predicted targeting categorysignal peptide
GOsGO:0000030,GO:0003674,GO:0003824,GO:0004376,GO:0004584,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005789,GO:0006464,GO:0006497,GO:0006505,GO:0006506,GO:0006629,GO:0006643,GO:0006644,GO:0006650,GO:0006661,GO:0006664,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009059,GO:0009247,GO:0009987,GO:0012505,GO:0016020,GO:0016021,GO:0016254,GO:0016740,GO:0016757,GO:0016758,GO:0019538,GO:0019637,GO:0030176,GO:0031224,GO:0031227,GO:0031984,GO:0033218,GO:0034645,GO:0036211,GO:0040007,GO:0042157,GO:0042158,GO:0042175,GO:0042277,GO:0043167,GO:0043168,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043295,GO:0043412,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044425,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0045017,GO:0046467,GO:0046474,GO:0046486,GO:0046488,GO:0048037,GO:0070085,GO:0071704,GO:0072341,GO:0090407,GO:0097502,GO:0098827,GO:1900750,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576,GO:1901681,GO:1903509
Exons15
Evalue3.59e-161
EggNOG OGsKOG1771@1|root,KOG1771@2759|Eukaryota
EC1.5.1.2
DescriptionGPI anchor biosynthetic process
Cds size1680
COG categoryM
CAZyGT22
BRITEko00000,ko00001,ko00002,ko01000,ko01003
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-australica_Contig_1003.4.1prot_C-australica_Contig_1003.4.1Chrysoparadoxa australica CS_1217polypeptideC-australica_Contig_1003 1954..4253 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682586737.5288908-UTR-C-australica_Contig_1003:1818..19531682586737.5288908-UTR-C-australica_Contig_1003:1818..1953Chrysoparadoxa australica CS_1217UTRC-australica_Contig_1003 1819..1953 +
1682586737.6305737-UTR-C-australica_Contig_1003:4253..48521682586737.6305737-UTR-C-australica_Contig_1003:4253..4852Chrysoparadoxa australica CS_1217UTRC-australica_Contig_1003 4254..4852 +
1682586737.6447303-UTR-C-australica_Contig_1003:4989..51221682586737.6447303-UTR-C-australica_Contig_1003:4989..5122Chrysoparadoxa australica CS_1217UTRC-australica_Contig_1003 4990..5122 +
1682586737.6558726-UTR-C-australica_Contig_1003:5190..52571682586737.6558726-UTR-C-australica_Contig_1003:5190..5257Chrysoparadoxa australica CS_1217UTRC-australica_Contig_1003 5191..5257 +
1682586737.6660798-UTR-C-australica_Contig_1003:5387..56651682586737.6660798-UTR-C-australica_Contig_1003:5387..5665Chrysoparadoxa australica CS_1217UTRC-australica_Contig_1003 5388..5665 +
1682586737.6756482-UTR-C-australica_Contig_1003:5764..59511682586737.6756482-UTR-C-australica_Contig_1003:5764..5951Chrysoparadoxa australica CS_1217UTRC-australica_Contig_1003 5765..5951 +
1682586737.685162-UTR-C-australica_Contig_1003:6046..63311682586737.685162-UTR-C-australica_Contig_1003:6046..6331Chrysoparadoxa australica CS_1217UTRC-australica_Contig_1003 6047..6331 +
1682586737.6963367-UTR-C-australica_Contig_1003:6455..70061682586737.6963367-UTR-C-australica_Contig_1003:6455..7006Chrysoparadoxa australica CS_1217UTRC-australica_Contig_1003 6456..7006 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682586737.5462618-CDS-C-australica_Contig_1003:1953..20841682586737.5462618-CDS-C-australica_Contig_1003:1953..2084Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1003 1954..2084 +
1682586737.5566204-CDS-C-australica_Contig_1003:2164..22911682586737.5566204-CDS-C-australica_Contig_1003:2164..2291Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1003 2165..2291 +
1682586737.5667436-CDS-C-australica_Contig_1003:2387..25191682586737.5667436-CDS-C-australica_Contig_1003:2387..2519Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1003 2388..2519 +
1682586737.5758193-CDS-C-australica_Contig_1003:2614..30791682586737.5758193-CDS-C-australica_Contig_1003:2614..3079Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1003 2615..3079 +
1682586737.585633-CDS-C-australica_Contig_1003:3208..34021682586737.585633-CDS-C-australica_Contig_1003:3208..3402Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1003 3209..3402 +
1682586737.5945513-CDS-C-australica_Contig_1003:3440..35371682586737.5945513-CDS-C-australica_Contig_1003:3440..3537Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1003 3441..3537 +
1682586737.6033206-CDS-C-australica_Contig_1003:3564..37791682586737.6033206-CDS-C-australica_Contig_1003:3564..3779Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1003 3565..3779 +
1682586737.6115978-CDS-C-australica_Contig_1003:3859..40611682586737.6115978-CDS-C-australica_Contig_1003:3859..4061Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1003 3860..4061 +
1682586737.6206384-CDS-C-australica_Contig_1003:4136..42531682586737.6206384-CDS-C-australica_Contig_1003:4136..4253Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1003 4137..4253 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-australica_Contig_1003.4.1

>prot_C-australica_Contig_1003.4.1 ID=prot_C-australica_Contig_1003.4.1|Name=mRNA_C-australica_Contig_1003.4.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=560bp
MKLLLFCILFRVLNALVVRTYFTPDEFWQGPEVAHWLAFGVGHLTWEWKN
GGQIRGFAHPLVIAILYKLLQWLGLDSSWAVAHGPKLLQGVAAGVCDYYT
FHTALKCFGQRAARWSLFLQLVNWFNFYCMVRPYANSLEAALTSAALCHW
TPLWLESNPLIPAPTATSSTSDKAIKAAKKASEAHYNEVKALLLASLCVA
VRPTSAVLWVAVGLFRLANLPLKRWPAYLSLVVGIVGSIVAISTVVDSFM
YGERVFVPLRFLRFNLLEGKSAQFGVQPWHWYLTQQGLPVVLGLALPLAV
IGAKKSSADKKKMAWVVAAFVAAHSTSLHKELRFLMPVIPIANVYAGYAL
AGSTAPPPSFSACFDRASWQALKMPAHLPSKTVQRVVLLSLIALNLPVAL
YLSLVHQRGPLAIADALQQELSAVTRARSKAAHEPSSRLAIHFLMPCHST
PYYSHVHFPELKGGIDLWQLDCSPQCREKGNQSCESGQFQADPLSFVKGA
YKSRGLPDYVVTYDAHGEELQSWLTKNKFAELSRVFNTQINGDSDSDTTY
KNIVLWKRS*
back to top

mRNA from alignment at C-australica_Contig_1003:1819..7006+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-australica_Contig_1003.4.1 ID=mRNA_C-australica_Contig_1003.4.1|Name=mRNA_C-australica_Contig_1003.4.1|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=5188bp|location=Sequence derived from alignment at C-australica_Contig_1003:1819..7006+ (Chrysoparadoxa australica CS_1217)
TCCATGGCCAAGTAAAGGATCCTTTTATCGGGTACCGCCCCATCCCAGGG CTGTGCTACATAGGGCAAGATTCCCACGCTTAACGAGAAGATCGAGAGCC TCAAGGAGAAACTTGACGTGAAGGACGAGCTGGATATGAAGCTTCTCTTA TTTTGCATCCTCTTCAGGGTGCTGAATGCCCTGGTGGTCAGGACATACTT CACCCCAGATGAATTCTGGCAGGGCCCTGAGGTGGCACATTGGTTAGCAT TTGGAGTAGGGCACTTGTAAGTTTTCGTGGGACTGAACCGAACTGTCATG CCCGCTATGTATCTCATATTCGCTCCTGCCTCTGCGCAACTCTCAGGACC TGGGAGTGGAAGAACGGTGGGCAGATCAGAGGGTTTGCTCATCCCCTTGT CATTGCAATACTGTACAAGCTTCTGCAGTGGCTTGGACTTGACAGCTCCT GGGCTGTTGCGCATGGCCCCAAGGTTGGTTGATTGCTTGCAACTCTGCCT GCAGTCTCTTCGTGGGAAATGGTGGGTAATAGCTCTCTCTCACCTCCTGT TGGCCAACTCCCTCAACAGTTGCTTCAGGGGGTGGCAGCAGGTGTGTGTG ATTACTACACGTTCCATACAGCACTCAAGTGCTTTGGTCAGCGGGCAGCT CGCTGGAGCTTATTCCTTCAGCTTGTGAATTGGTTCAACTTCTACTGTAT GGTGAGTTACACGTGGCAAGCCCAATTCTAAAAGAAGAAGAGTGGCTTGA GTAGCTATGTGCCCTTTCCTCATGCCTTATTTTAACATTTCAACAGGTGC GGCCATATGCTAACTCATTGGAAGCTGCCCTCACATCGGCTGCTCTGTGT CATTGGACTCCGTTGTGGCTAGAGAGCAACCCTCTCATCCCTGCACCGAC GGCAACGAGCTCCACCTCCGACAAGGCTATCAAGGCAGCGAAGAAAGCGA GCGAAGCGCATTATAATGAGGTCAAAGCACTGCTGCTTGCCTCTCTCTGC GTTGCTGTGCGGCCGACAAGCGCTGTGCTGTGGGTGGCTGTGGGGCTGTT CAGGCTGGCCAACTTGCCGTTGAAGAGATGGCCTGCCTACCTGAGCCTGG TGGTCGGGATTGTTGGGAGCATTGTGGCCATCTCTACTGTGGTAGATAGC TTCATGTACGGCGAACGTGTGTTTGTGCCGCTTAGGTTCCTGCGCTTCAA CTTACTGGAAGGAAAGAGCGCACAGTTTGGAGTGCAGCCTTGGCACTGGT ATCTCACGCAGGTATGTTCCATGCAAACTCAAGGTTTTCATAACATGGGG ATACCGTGAAGTTTCCTCTTATCTCTCACTATGCTTGTCAGCCTTCACAA CACTTTCAACGTTGATGCCAGCTGACACAGCATCTGGTAGCAGGGTCTAC CTGTGGTGCTTGGCCTAGCATTGCCTCTTGCTGTGATTGGGGCGAAGAAG TCATCTGCAGACAAGAAGAAAATGGCGTGGGTGGTGGCAGCGTTTGTGGC TGCTCACAGCACTAGCCTGCACAAGGAGCTCCGGTTCCTGATGCCAGTCA TCCCCATTGCTAACGTTTACGCGGGGTATGCTCTGTGGGAGTGGCTGCAG CAGAAGGGGTAAGTCAGCGCAGAGCTGGAAGCACCGCACCTCCACCTTCC TTCTCCGCCTGCTTTGACAGAGCCTCTTGGCAAGCCTTGAAAATGCCGGC TCACTTACCCTCCAAAACCGTCCCTATCTAATCGTGCAGGCTGGAGGTCC AACGAGTTGTGTTGTTGAGCCTCATTGCCCTCAACCTTCCTGTGGCGTTG TACCTATCCCTGGTACACCAACGGGGGCCCCTGGCCATAGCTGATGCGCT GCAGCAGGAGCTGTCTGCTGTGACCAGAGCCAGATCTAAAGCAGCTCATG AACCCAGCAGCCGTTTGGCCATTCATTTCCTCATGCCCTGCCACTCGACG CCCTACTATAGGTCAGAGTCTCATGTGCTTTTCGAACAGGACCCGAACAT GAGCTCACGCTGCATGCAACTTGTTCCTCTTGCCATTTCAGTCATGTGCA CTTCCCAGAACTCAAAGGAGGGATAGATTTATGGCAGCTGGACTGCTCTC CTCAATGCAGAGAGAAGGGGAACCAATCATGCGAGAGCGGCCAGTTCCAG GCTGATCCACTGAGCTTCGTGAAGGGTGCTTACAAAAGCCGTGGACTGCC TGATTATGTTGTGACCTATGATGCACACGGAGAGGAATTACAGGTCAGTT GTAGCAGCAACAGTTTTGGTTGCTTCCAGCCTAACACTACTCTCTGCTGC TGGACTGTATCTCTGCAGAGCTGGCTGACAAAAAACAAGTTTGCTGAGCT GAGCCGGGTTTTCAACACGCAAATCAACGGTGACTCAGACAGCGATACCA CTTATAAGAACATTGTGCTGTGGAAACGGAGCTGACGATGGCACAGTGAG TGCTGCGACATGAGCACCCAAGACAAGGAATACAGGGTAGACGATTTACT TTTTTTTATACAAGAAAGAGGCTTTGGTTAAGGCGCCGGTGCCTGCTGCT TCCCTTGCCTACCCCATTGCCACGGCTTCCACCAGGAAGCTCCCGCTCCT CCAGGGGTGCTTGACCCTGACACTTCCACCTCACTCTCCTTGGTGCCATT TGCCTTTTTGGCAACCTTGCCTTCATCCTCAGAGACCCCGGGCCTCCTGG GATGGCCGTGGCACAAGAGGGGAAAGAAGTAAGTGAGGTTTTTGTGCAAG AAGAGACAGGGATGGGTGAGTATGCTCACCGTCTCCCTTTGTGCCTGAAA TTTGGTGGTGGGCGGTCGTCCTTAATGACATTGCCATTCTTTCTCTCCAG GTGCCTTTGTGGTAGATACTTGGTCTCAAACTTTTCATAATCCGCCTGAG TGGCAACTCCCCTCCGTCCTCCTCCCTTGACATATCTGCTGTTCTTGCCA TAGATTGCCTCATTGATCCGCTTCTCTACAAAGGGGTCACCATCTATTGC GCCCTGCAGGAAGGCTTGAGCTGATGCACTCTGGGCACTTTGGGAGCAAG GAGCCACAGAACACATAAGAAGAGGAGAAAGAGAGGTTCGTGCATGAGGA GGCAAGCTCTAGTGTGAGGTAACGGCTACCCAGCTTTACTTCTGACTGCA GCGCTGAAAGGAGAAGCAGAGCTCACCTGTTTTTCTCAAAGTGGTACTCC TTGTGCACCTCTGCCGCTTTCTCCTCATCACTCTTCTCATTGGGGACGGC ATAAAAGAAGTACAACCCAGCTATAGGGACTAGCACCAAGCTGAACTCCA GCAGCTGGAGTGGAAGGGGAGGTTAAGAGATAAGGGTTCCAGAGAGGGGG ATCGTACCCGAAGCAAACAAACCTGGCGTGTGAGGCGTGGCTTTCCAGCA TCGTTTTTGGGTGGCACGAACTTGGGGAAAGAGGGTCCAGCATCTGAATG GCAGGGGCGAGGGGGAGAGAGAGGATGGGGTGGCTTAGGATCATATTAGC GAATGGGAGCAAGGGCCACTATGAGCATAAAAGGTAGGCCCAGCCAATAA TGGATGTGACGGGGGCTAGCAACCTGTGACCGAGCTTTTAGCAGCTGCAA AGAGAGGGCGCGCGCGAAGCATTGACCTTCGTGAGCTCGTGGGCTCTTAA GGTGGAAGGGATGAGGCCCTACAGAGGAGTCAGAGACTCCCGAGATGAGG AAGAGTTTGTTGGCTTTGTTGCATTGTTGCTCGTTGCTGGTGGTTGTGTT TTTGGCTGGTTGGTTGTGTTGTTGGTTGAGGTTAGTCTGTTGGTTGGTTG GCTGTTGGCTGTTGGCGTAATTCAAATCAAGGACAAGGATCTTTCAGGTA TCTTCCAAGCTTCTCAAGTAATACCCTCCCTGGCCTAATAATGTACCTCT GAGCCCTCCCTAAACTCTCTCCTCTTGCACTTTTTCGTTGCAACAGCCTC CCCATGAGTCTTCTAGCACAACTATTACCAGTAGAGAATCGTGTGGAGAA AGTGTTTGGATATGTAGGAAGTGGGCAGAGCAGCTTTATGAGGGTTAATC GTCAGTGGAATGACATTTATGTGAAGCTCTATGGTGCCAAGACTACCTAT GGTGCAATACTGGTATCAGTGGCACGTTTTGAGGTGAGCTGCTAGAAGCA AGACTGTACTTGATGGCCTACCGTTACACCTGATGCACACCTGCTGCTCC CTAATCCCAGCTCTTCCCTAATCCTCAGCTAGCTGCTGCTGAAGGGGGGC ACTACTTAAATGTGAAGCTCCTCGAGAGGGCAGCTGGGAGTGGCAACTTA CGAGTTTGCCAGAAGCTAAAGAGCTTGAACTGCCCTGAAATGGGAGCACA TGTGACGCAGCGGCTAGGGGAGGTCATCTGCAAGTACTTCAGTTTCTAAG GGAAGGTCCAAATCCATGCCCTTTGAATGAAGGCACCTGTAGAGCAGCTG CTGATGGAGGGCATCCGGAGGTACTTGAATGCATTGTATTAGTGCTCAAT TGGAAAGAGAAAGGTACTAGAGAGTCCTGGACAAACATGTCTTTTCCTAA AAGCGTTATCTTACTGCACCCCAACCAACCGGTCCACCAACTCCCCAACC TCCCCACCTCCCCAACCCCCCGGCCACAACACCGCAGCAGGGAGTGCCTG TTCTGGCAATGGATTCTCCAACCCACGAACCACGGTGAACATGGCTAGCT CACGGCGTGATAACGCCATTTGAAGAGCCACAGAGATGGACTGTCGCAAA CAAGCAGGAGAACGTGCCCTGGCCCACTCAAGAGTGAACACCTAGACCTT GCATAGACTTAGCCCGTTGAGTAGCCACTGCCAACAGGAATTTAGCAAAT TCTTTACCACAGCAACCGCAAGCTTCAACAGCAGCAGGAACGAAACGGTG GCTTCTATTAATCGTCAATTGGAAAGTGAAATTAAGAGAGAGAAAGCCTT AGACTAACATCTCTTGTCCTAAAAGCCCTATCCTTGTACTACAGTAACCA TAGCTTTGAACAGGTGCAGGAACTGGTTTTCGAAACGGTGGTTCCAGATC CATGCCCTTGGGACAGTTGGTCCTGCCCTGCTTGGGTAGTCAGGAGGGGG CATCATGTGTATGGTACTGACATAGATTCAGAGCCATTCACCTCTATAGT AAACTGTGTCCATGCGAATGGTCACCCATGTGATTGCC
back to top

Coding sequence (CDS) from alignment at C-australica_Contig_1003:1819..7006+

>mRNA_C-australica_Contig_1003.4.1 ID=mRNA_C-australica_Contig_1003.4.1|Name=mRNA_C-australica_Contig_1003.4.1|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=1680bp|location=Sequence derived from alignment at C-australica_Contig_1003:1819..7006+ (Chrysoparadoxa australica CS_1217)
ATGAAGCTTCTCTTATTTTGCATCCTCTTCAGGGTGCTGAATGCCCTGGT
GGTCAGGACATACTTCACCCCAGATGAATTCTGGCAGGGCCCTGAGGTGG
CACATTGGTTAGCATTTGGAGTAGGGCACTTGACCTGGGAGTGGAAGAAC
GGTGGGCAGATCAGAGGGTTTGCTCATCCCCTTGTCATTGCAATACTGTA
CAAGCTTCTGCAGTGGCTTGGACTTGACAGCTCCTGGGCTGTTGCGCATG
GCCCCAAGTTGCTTCAGGGGGTGGCAGCAGGTGTGTGTGATTACTACACG
TTCCATACAGCACTCAAGTGCTTTGGTCAGCGGGCAGCTCGCTGGAGCTT
ATTCCTTCAGCTTGTGAATTGGTTCAACTTCTACTGTATGGTGCGGCCAT
ATGCTAACTCATTGGAAGCTGCCCTCACATCGGCTGCTCTGTGTCATTGG
ACTCCGTTGTGGCTAGAGAGCAACCCTCTCATCCCTGCACCGACGGCAAC
GAGCTCCACCTCCGACAAGGCTATCAAGGCAGCGAAGAAAGCGAGCGAAG
CGCATTATAATGAGGTCAAAGCACTGCTGCTTGCCTCTCTCTGCGTTGCT
GTGCGGCCGACAAGCGCTGTGCTGTGGGTGGCTGTGGGGCTGTTCAGGCT
GGCCAACTTGCCGTTGAAGAGATGGCCTGCCTACCTGAGCCTGGTGGTCG
GGATTGTTGGGAGCATTGTGGCCATCTCTACTGTGGTAGATAGCTTCATG
TACGGCGAACGTGTGTTTGTGCCGCTTAGGTTCCTGCGCTTCAACTTACT
GGAAGGAAAGAGCGCACAGTTTGGAGTGCAGCCTTGGCACTGGTATCTCA
CGCAGCAGGGTCTACCTGTGGTGCTTGGCCTAGCATTGCCTCTTGCTGTG
ATTGGGGCGAAGAAGTCATCTGCAGACAAGAAGAAAATGGCGTGGGTGGT
GGCAGCGTTTGTGGCTGCTCACAGCACTAGCCTGCACAAGGAGCTCCGGT
TCCTGATGCCAGTCATCCCCATTGCTAACGTTTACGCGGGGTATGCTCTA
GCTGGAAGCACCGCACCTCCACCTTCCTTCTCCGCCTGCTTTGACAGAGC
CTCTTGGCAAGCCTTGAAAATGCCGGCTCACTTACCCTCCAAAACCGTCC
AACGAGTTGTGTTGTTGAGCCTCATTGCCCTCAACCTTCCTGTGGCGTTG
TACCTATCCCTGGTACACCAACGGGGGCCCCTGGCCATAGCTGATGCGCT
GCAGCAGGAGCTGTCTGCTGTGACCAGAGCCAGATCTAAAGCAGCTCATG
AACCCAGCAGCCGTTTGGCCATTCATTTCCTCATGCCCTGCCACTCGACG
CCCTACTATAGTCATGTGCACTTCCCAGAACTCAAAGGAGGGATAGATTT
ATGGCAGCTGGACTGCTCTCCTCAATGCAGAGAGAAGGGGAACCAATCAT
GCGAGAGCGGCCAGTTCCAGGCTGATCCACTGAGCTTCGTGAAGGGTGCT
TACAAAAGCCGTGGACTGCCTGATTATGTTGTGACCTATGATGCACACGG
AGAGGAATTACAGAGCTGGCTGACAAAAAACAAGTTTGCTGAGCTGAGCC
GGGTTTTCAACACGCAAATCAACGGTGACTCAGACAGCGATACCACTTAT
AAGAACATTGTGCTGTGGAAACGGAGCTGA
back to top