mRNA_C-australica_Contig_10011.1.1 (mRNA) Chrysoparadoxa australica CS_1217

You are viewing an mRNA, more information available on the corresponding polypeptide page

Homology

BLAST of mRNA_C-australica_Contig_10011.1.1 vs. uniprot
Match: A0A350M8V7_9FLAO (Por_Secre_tail domain-containing protein (Fragment) n=1 Tax=Flavobacteriales bacterium TaxID=2021391 RepID=A0A350M8V7_9FLAO)

HSP 1 Score: 192 bits (488), Expect = 2.980e-56
Identity = 99/141 (70.21%), Postives = 110/141 (78.01%), Query Frame = 1

Query:   52 SIAQNALNFDGSTDYVQTNSPGVTGTNNRTFEAWVYVSSNAPLSNLCIIDYGTNALGSRNTFMVAGNRALSFISGGTNANISSNANDVPADTWVHVAFVLNSGTGYLYRNGVQVGTGSQTSVNTPTGNQYVIVGQRVSGGS 474
            +  QNAL+FDGS DYVQT  PGV GTNNRTFEAWVYV   A  +NLCI DYG N  GSRNTF V G R L+FISGGTNANISS +N +    W HVAFVL+SGTGYLY NG QVGTGS +SVNTPTGNQ + +G+RVSGGS
Sbjct:    1 TFGQNALHFDGSNDYVQTTFPGVFGTNNRTFEAWVYVDIGASATNLCITDYGQNLAGSRNTFSVTGTRGLTFISGGTNANISSASNVITEGQWTHVAFVLSSGTGYLYVNGTQVGTGSLSSVNTPTGNQNLRIGERVSGGS 141

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BLAST of mRNA_C-australica_Contig_10011.1.1 vs. uniprot
Match: A0A7G8ZNU9_9PROT (T9SS type A sorting domain-containing protein n=1 Tax=Hyphobacterium sp. CCMP332 TaxID=2749086 RepID=A0A7G8ZNU9_9PROT)

HSP 1 Score: 190 bits (483), Expect = 2.400e-55
Identity = 100/152 (65.79%), Postives = 118/152 (77.63%), Query Frame = 1

Query:   19 LLTFFCFSITISIAQNALNFDGSTDYVQTNSPGVTGTNNRTFEAWVYVSSNAPLSNLCIIDYGTNALGSRNTFMVAGNRALSFISGGTNANISSNANDVPADTWVHVAFVLNSGTGYLYRNGVQVGTGSQTSVNTPTGNQYVIVGQRVSGGS 474
            L T F F +    AQNALNFDG  D+VQT+  GV G+NNRTFEAWV V+  A  SNLCI DYG NA+GSRNTF V G+R+L FISGGTNANIS+ AN +    W HVAFVL++GTGYLY+NG QVGTG  T+VNTP+GNQ +I+GQRV+GGS
Sbjct:    9 LCTLFIFPVLHLNAQNALNFDGVNDFVQTSFAGVQGSNNRTFEAWVNVAPGAAASNLCISDYGLNAVGSRNTFSVGGDRSLKFISGGTNANISTAANVIVEGEWTHVAFVLDNGTGYLYKNGQQVGTGLLTTVNTPSGNQNLIIGQRVNGGS 160

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BLAST of mRNA_C-australica_Contig_10011.1.1 vs. uniprot
Match: A0A7Y3XHL7_9BACT (T9SS type A sorting domain-containing protein n=1 Tax=Bacteroidetes bacterium TaxID=1898104 RepID=A0A7Y3XHL7_9BACT)

HSP 1 Score: 186 bits (472), Expect = 2.120e-52
Identity = 102/152 (67.11%), Postives = 117/152 (76.97%), Query Frame = 1

Query:   19 LLTFFCFSITISIAQNALNFDGSTDYVQTNSPGVTGTNNRTFEAWVYVSSNAPLSNLCIIDYGTNALGSRNTFMVAGNRALSFISGGTNANISSNANDVPADTWVHVAFVLNSGTGYLYRNGVQVGTGSQTSVNTPTGNQYVIVGQRVSGGS 474
            +LTFF    T+S AQNALNFDG  DYVQTN  GV  TNNRTFEAWV VS NAP +NL I+DYG NA GSRNTFM+  NR L + SGGTNANIS+ +  + A  W HVAFVL++GTGYLY NG+Q GTGS TSVNTP+GN  + +GQRVSGGS
Sbjct:   12 ILTFFG---TLS-AQNALNFDGVDDYVQTNFSGVLATNNRTFEAWVNVSPNAPNANLTILDYGLNAAGSRNTFMINANRGLGYFSGGTNANISTTSVVIQAGQWTHVAFVLDNGTGYLYVNGIQSGTGSLTSVNTPSGNAKLTIGQRVSGGS 159

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BLAST of mRNA_C-australica_Contig_10011.1.1 vs. uniprot
Match: A0A084JUI6_NONUL (LamGL domain-containing protein n=2 Tax=Nonlabens TaxID=363408 RepID=A0A084JUI6_NONUL)

HSP 1 Score: 176 bits (445), Expect = 9.960e-51
Identity = 95/159 (59.75%), Postives = 118/159 (74.21%), Query Frame = 1

Query:    1 MTKTALLLTFFCFSITI-SIAQNALNFDGSTDYVQTNSPGVTGTNNRTFEAWVYVSSNAPLSNLCIIDYGTNALGSRNTFMVAGNRALSFISGGTNANISSNANDVPADTWVHVAFVLNSGTGYLYRNGVQVGTGSQTSVNTPTGNQYVIVGQRVSGGS 474
            M KT LL   F  S T+ +  QN LNFD + DYVQT+  GVTGT NRTFEAW+Y+S +AP +NL I+DYG N +GSRNTFMV  NR LSFISGGTNANISS A  +PA  W  VAFVL++GTG+ + NG QVGTG+ ++VNTPT    + +G+RV+GG+
Sbjct:    1 MKKTLLLFFLFIGSTTLFAQTQNGLNFDSNDDYVQTSFTGVTGTTNRTFEAWIYLSPSAPNTNLAILDYGLNTVGSRNTFMVNANRGLSFISGGTNANISSTAGIIPAGQWTQVAFVLSNGTGFFFVNGNQVGTGNLSTVNTPTTGTDLRIGRRVAGGA 159

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BLAST of mRNA_C-australica_Contig_10011.1.1 vs. uniprot
Match: UPI001BB69396 (T9SS type A sorting domain-containing protein n=1 Tax=Cryomorphaceae bacterium TaxID=1898111 RepID=UPI001BB69396)

HSP 1 Score: 176 bits (446), Expect = 2.280e-50
Identity = 95/147 (64.63%), Postives = 111/147 (75.51%), Query Frame = 1

Query:   34 CFSITISIAQNALNFDGSTDYVQTNSPGVTGTNNRTFEAWVYVSSNAPLSNLCIIDYGTNALGSRNTFMVAGNRALSFISGGTNANISSNANDVPADTWVHVAFVLNSGTGYLYRNGVQVGTGSQTSVNTPTGNQYVIVGQRVSGGS 474
            CF++  S AQNALNFDG+ DYVQT+ PGV+GT NRTFEAWVYV ++A  SN+CI+DYG NA+GSRNTF V     L +ISGGTNANISS     P   W HVAFVL +G GYLY NG QVGTGS T+VNTPTG   + +G+RV GGS
Sbjct:   16 CFAL-FSNAQNALNFDGTDDYVQTSYPGVSGTANRTFEAWVYVQNSAS-SNMCILDYGLNAVGSRNTFSVGPGDKLVYISGGTNANISSPNGTFPIAQWNHVAFVLENGVGYLYVNGTQVGTGSLTTVNTPTGQANMTIGERVMGGS 160

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BLAST of mRNA_C-australica_Contig_10011.1.1 vs. uniprot
Match: UPI001E3DE432 (T9SS type A sorting domain-containing protein n=3 Tax=Mangrovimonas TaxID=1211036 RepID=UPI001E3DE432)

HSP 1 Score: 174 bits (440), Expect = 6.470e-50
Identity = 92/149 (61.74%), Postives = 115/149 (77.18%), Query Frame = 1

Query:   28 FFCFSITISIAQNALNFDGSTDYVQTNSPGVTGTNNRTFEAWVYVSSNAPLSNLCIIDYGTNALGSRNTFMVAGNRALSFISGGTNANISSNANDVPADTWVHVAFVLNSGTGYLYRNGVQVGTGSQTSVNTPTGNQYVIVGQRVSGGS 474
            FF F  TI  AQ +L+FDGS DY+QT   GV G N+RTFEAW+YVSS+AP SNL I+DYG N +G RNTF+V G+R+L +ISGGTNANI++ AN +P  TW HVAFVL++  GYLY NGVQ GTGS ++VNT +G   + +GQRV+GGS
Sbjct:   21 FFIFPRTIH-AQTSLSFDGSNDYIQTPFNGVLGDNDRTFEAWIYVSSSAPSSNLAILDYGHNDVGDRNTFVVGGDRSLKYISGGTNANITTAANVIPTATWTHVAFVLDNSIGYLYVNGVQEGTGSLSTVNTTSGYGNLRIGQRVTGGS 168

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BLAST of mRNA_C-australica_Contig_10011.1.1 vs. uniprot
Match: UPI0006B4C485 (T9SS type A sorting domain-containing protein n=1 Tax=Mangrovimonas xylaniphaga TaxID=1645915 RepID=UPI0006B4C485)

HSP 1 Score: 176 bits (446), Expect = 1.120e-48
Identity = 89/154 (57.79%), Postives = 112/154 (72.73%), Query Frame = 1

Query:    7 KTALLLTFFCFSITISIAQNALNFDGSTDYVQTNSPGVTGTNNRTFEAWVYVSSNAPLSNLCIIDYGTNALGSRNTFMVAGNRALSFISGGTNANISSNANDVPADTWVHVAFVLNSGTGYLYRNGVQVGTGSQTSVNTPTGNQYVIVGQRVSG 468
            K   L  F   S+ IS AQ  LNFDG+ DYVQT+  GV G  NRTFEAW+YV S  P S+  I+DYGTN +GSRNTF+V  + +L F+SGGTNAN+ ++ + VP D W HVAFVLN+GTGYLY NGV+  T + T+VNTP+GN+ V++G RVSG
Sbjct:    7 KKVFLPAFIAGSVLISSAQTGLNFDGTDDYVQTDYAGVLGAANRTFEAWIYVPSPVPSSSFAILDYGTNDVGSRNTFLVKNDNSLKFVSGGTNANMGTDPDTVPLDVWTHVAFVLNNGTGYLYINGVEKATANLTTVNTPSGNENVLIGNRVSG 160

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BLAST of mRNA_C-australica_Contig_10011.1.1 vs. uniprot
Match: A0A350JEY1_9FLAO (LamGL domain-containing protein n=1 Tax=Flavobacteriales bacterium TaxID=2021391 RepID=A0A350JEY1_9FLAO)

HSP 1 Score: 173 bits (438), Expect = 4.670e-48
Identity = 93/139 (66.91%), Postives = 108/139 (77.70%), Query Frame = 1

Query:   58 AQNALNFDGSTDYVQTNSPGVTGTNNRTFEAWVYVSSNAPLSNLCIIDYGTNALGSRNTFMVAGNRALSFISGGTNANISSNANDVPADTWVHVAFVLNSGTGYLYRNGVQVGTGSQTSVNTPTGNQYVIVGQRVSGGS 474
            AQNAL FDG+ DYVQT   GV G+ NRTFEAWV +SS+A  +N  +IDYG NA+GSRNTFM+  N  LSFISGGTNANI + +N V A+ W HVAFVL+SGTGYLY NG QVGTGS TSVNTPT    + +GQRVSGG+
Sbjct:   25 AQNALQFDGANDYVQTTFDGVLGSTNRTFEAWVNLSSSATGNN-AVIDYGQNAVGSRNTFMINSNNGLSFISGGTNANIGTASNIVTANQWTHVAFVLDSGTGYLYLNGTQVGTGSLTSVNTPTTGTDLRIGQRVSGGN 162

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BLAST of mRNA_C-australica_Contig_10011.1.1 vs. uniprot
Match: A0A2W1NFF4_9FLAO (LamGL domain-containing protein n=1 Tax=Putridiphycobacter roseus TaxID=2219161 RepID=A0A2W1NFF4_9FLAO)

HSP 1 Score: 172 bits (437), Expect = 5.940e-48
Identity = 91/160 (56.88%), Postives = 114/160 (71.25%), Query Frame = 1

Query:    1 MTKTALLLTFFCFSITISIAQN-ALNFDGSTDYVQTNSPGVTGTNNRTFEAWVYVSSNAPLSNLCIIDYGTNALGSRNTFMVAGNRALSFISGGTNANISS-NANDVPADTWVHVAFVLNSGTGYLYRNGVQVGTGSQTSVNTPTGNQYVIVGQRVSGGS 474
            M K  LL      + TIS +QN A+NFDGS DY+ T   GVTG+ +RTFEAW+Y+   AP SNLC++DYGTNA G RNTFMV G+R L+  SGGT+ N+SS N NDVP   W HVA VLN G GYLY NGVQVGTG+   ++TPT  + + +G+RV+GG+
Sbjct:    1 MKKKLLLFMIGIATATISFSQNPAINFDGSNDYISTTFGGVTGSTDRTFEAWIYIDPTAPASNLCVLDYGTNASGDRNTFMVTGSRKLALFSGGTSGNLSSSNNNDVPVGQWTHVAAVLNGGAGYLYVNGVQVGTGTLAGISTPTTGEDMKIGRRVAGGT 160

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BLAST of mRNA_C-australica_Contig_10011.1.1 vs. uniprot
Match: UPI0006B5DCFC (T9SS type A sorting domain-containing protein n=1 Tax=Mangrovimonas sp. TPBH4 TaxID=1645914 RepID=UPI0006B5DCFC)

HSP 1 Score: 165 bits (418), Expect = 1.170e-46
Identity = 82/149 (55.03%), Postives = 109/149 (73.15%), Query Frame = 1

Query:   16 LLLTFFCFSITISIAQNALNFDGSTDYVQTNSPGVTGTNNRTFEAWVYVSSNAPLSNLCIIDYGTNALGSRNTFMVAGNRALSFISGGTNANISSNANDVPADTWVHVAFVLNSGTGYLYRNGVQVGTGSQTSVNTPTGNQYVIVGQRV 462
            +L  FF  ++    AQ  LNFDGS DY+QT+  GV G+ NRTFEAW+YV S  P  NL I+DYGTNA GSRNTF++  + +L F+SGGT AN+ ++ + VP D W HVAFVLN+GTGYLY NG +  +G+ ++VNTP+GN+ V++G RV
Sbjct:   10 ILTAFFAATMLTINAQTGLNFDGSNDYIQTSFAGVLGSTNRTFEAWIYVPSPGPSINLGILDYGTNAAGSRNTFLIKNDNSLKFVSGGTFANLGTDPDTVPLDAWTHVAFVLNNGTGYLYINGEEAISGNLSNVNTPSGNEDVLIGNRV 158

The following BLAST results are available for this feature:

BLAST of mRNA_C-australica_Contig_10011.1.1 vs. uniprot

BLAST of mRNA_C-australica_Contig_10011.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25

ZOOM

x 1

POSITION

0


Match Name	E-value	Identity	Description
A0A350M8V7_9FLAO	2.980e-56	70.21	Por_Secre_tail domain-containing protein (Fragment...	[more]
A0A7G8ZNU9_9PROT	2.400e-55	65.79	T9SS type A sorting domain-containing protein n=1 ...	[more]
A0A7Y3XHL7_9BACT	2.120e-52	67.11	T9SS type A sorting domain-containing protein n=1 ...	[more]
A0A084JUI6_NONUL	9.960e-51	59.75	LamGL domain-containing protein n=2 Tax=Nonlabens ...	[more]
UPI001BB69396	2.280e-50	64.63	T9SS type A sorting domain-containing protein n=1 ...	[more]
UPI001E3DE432	6.470e-50	61.74	T9SS type A sorting domain-containing protein n=3 ...	[more]
UPI0006B4C485	1.120e-48	57.79	T9SS type A sorting domain-containing protein n=1 ...	[more]
A0A350JEY1_9FLAO	4.670e-48	66.91	LamGL domain-containing protein n=1 Tax=Flavobacte...	[more]
A0A2W1NFF4_9FLAO	5.940e-48	56.88	LamGL domain-containing protein n=1 Tax=Putridiphy...	[more]
UPI0006B5DCFC	1.170e-46	55.03	T9SS type A sorting domain-containing protein n=1 ...	[more]

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Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at C-australica_Contig_10011:3..476-
coding sequence from alignment at C-australica_Contig_10011:3..476-

protein sequence of mRNA_C-australica_Contig_10011.1.1

>prot_C-australica_Contig_10011.1.1 ID=prot_C-australica_Contig_10011.1.1|Name=mRNA_C-australica_Contig_10011.1.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=158bp
MTKTALLLTFFCFSITISIAQNALNFDGSTDYVQTNSPGVTGTNNRTFEA
WVYVSSNAPLSNLCIIDYGTNALGSRNTFMVAGNRALSFISGGTNANISS
NANDVPADTWVHVAFVLNSGTGYLYRNGVQVGTGSQTSVNTPTGNQYVIV
GQRVSGGS

mRNA from alignment at C-australica_Contig_10011:3..476-

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_C-australica_Contig_10011.1.1 ID=mRNA_C-australica_Contig_10011.1.1|Name=mRNA_C-australica_Contig_10011.1.1|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=474bp|location=Sequence derived from alignment at C-australica_Contig_10011:3..476- (Chrysoparadoxa australica CS_1217)
ATGACTAAAACGGCACTATTGCTAACTTTCTTCTGTTTTTCCATTACAAT
TTCAATTGCTCAAAACGCTCTTAATTTTGATGGCAGTACAGACTATGTGC
AAACCAATTCACCCGGGGTAACAGGCACCAACAACCGCACCTTCGAAGCA
TGGGTTTACGTGAGTTCCAACGCACCACTTTCCAACCTCTGTATTATTGA
TTATGGAACCAACGCCTTAGGTTCTCGAAACACCTTTATGGTAGCGGGAA
ATCGCGCCTTGAGCTTTATTTCTGGTGGTACGAATGCGAACATTTCATCG
AATGCTAATGATGTTCCTGCTGACACGTGGGTACATGTTGCGTTCGTACT
CAATAGTGGAACCGGCTATTTGTACCGCAATGGTGTCCAAGTCGGAACAG
GGTCACAGACCTCGGTCAATACCCCAACTGGCAATCAATACGTAATCGTC
GGACAAAGGGTCAGCGGTGGCTCC

Coding sequence (CDS) from alignment at C-australica_Contig_10011:3..476-

>mRNA_C-australica_Contig_10011.1.1 ID=mRNA_C-australica_Contig_10011.1.1|Name=mRNA_C-australica_Contig_10011.1.1|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=474bp|location=Sequence derived from alignment at C-australica_Contig_10011:3..476- (Chrysoparadoxa australica CS_1217)
ATGACTAAAACGGCACTATTGCTAACTTTCTTCTGTTTTTCCATTACAAT
TTCAATTGCTCAAAACGCTCTTAATTTTGATGGCAGTACAGACTATGTGC
AAACCAATTCACCCGGGGTAACAGGCACCAACAACCGCACCTTCGAAGCA
TGGGTTTACGTGAGTTCCAACGCACCACTTTCCAACCTCTGTATTATTGA
TTATGGAACCAACGCCTTAGGTTCTCGAAACACCTTTATGGTAGCGGGAA
ATCGCGCCTTGAGCTTTATTTCTGGTGGTACGAATGCGAACATTTCATCG
AATGCTAATGATGTTCCTGCTGACACGTGGGTACATGTTGCGTTCGTACT
CAATAGTGGAACCGGCTATTTGTACCGCAATGGTGTCCAAGTCGGAACAG
GGTCACAGACCTCGGTCAATACCCCAACTGGCAATCAATACGTAATCGTC
GGACAAAGGGTCAGCGGTGGCTCC