mRNA_C-australica_Contig_10011.1.1 (mRNA) Chrysoparadoxa australica CS_1217
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_C-australica_Contig_10011.1.1 vs. uniprot
Match: A0A350M8V7_9FLAO (Por_Secre_tail domain-containing protein (Fragment) n=1 Tax=Flavobacteriales bacterium TaxID=2021391 RepID=A0A350M8V7_9FLAO) HSP 1 Score: 192 bits (488), Expect = 2.980e-56 Identity = 99/141 (70.21%), Postives = 110/141 (78.01%), Query Frame = 1 Query: 52 SIAQNALNFDGSTDYVQTNSPGVTGTNNRTFEAWVYVSSNAPLSNLCIIDYGTNALGSRNTFMVAGNRALSFISGGTNANISSNANDVPADTWVHVAFVLNSGTGYLYRNGVQVGTGSQTSVNTPTGNQYVIVGQRVSGGS 474 + QNAL+FDGS DYVQT PGV GTNNRTFEAWVYV A +NLCI DYG N GSRNTF V G R L+FISGGTNANISS +N + W HVAFVL+SGTGYLY NG QVGTGS +SVNTPTGNQ + +G+RVSGGS Sbjct: 1 TFGQNALHFDGSNDYVQTTFPGVFGTNNRTFEAWVYVDIGASATNLCITDYGQNLAGSRNTFSVTGTRGLTFISGGTNANISSASNVITEGQWTHVAFVLSSGTGYLYVNGTQVGTGSLSSVNTPTGNQNLRIGERVSGGS 141
BLAST of mRNA_C-australica_Contig_10011.1.1 vs. uniprot
Match: A0A7G8ZNU9_9PROT (T9SS type A sorting domain-containing protein n=1 Tax=Hyphobacterium sp. CCMP332 TaxID=2749086 RepID=A0A7G8ZNU9_9PROT) HSP 1 Score: 190 bits (483), Expect = 2.400e-55 Identity = 100/152 (65.79%), Postives = 118/152 (77.63%), Query Frame = 1 Query: 19 LLTFFCFSITISIAQNALNFDGSTDYVQTNSPGVTGTNNRTFEAWVYVSSNAPLSNLCIIDYGTNALGSRNTFMVAGNRALSFISGGTNANISSNANDVPADTWVHVAFVLNSGTGYLYRNGVQVGTGSQTSVNTPTGNQYVIVGQRVSGGS 474 L T F F + AQNALNFDG D+VQT+ GV G+NNRTFEAWV V+ A SNLCI DYG NA+GSRNTF V G+R+L FISGGTNANIS+ AN + W HVAFVL++GTGYLY+NG QVGTG T+VNTP+GNQ +I+GQRV+GGS Sbjct: 9 LCTLFIFPVLHLNAQNALNFDGVNDFVQTSFAGVQGSNNRTFEAWVNVAPGAAASNLCISDYGLNAVGSRNTFSVGGDRSLKFISGGTNANISTAANVIVEGEWTHVAFVLDNGTGYLYKNGQQVGTGLLTTVNTPSGNQNLIIGQRVNGGS 160
BLAST of mRNA_C-australica_Contig_10011.1.1 vs. uniprot
Match: A0A7Y3XHL7_9BACT (T9SS type A sorting domain-containing protein n=1 Tax=Bacteroidetes bacterium TaxID=1898104 RepID=A0A7Y3XHL7_9BACT) HSP 1 Score: 186 bits (472), Expect = 2.120e-52 Identity = 102/152 (67.11%), Postives = 117/152 (76.97%), Query Frame = 1 Query: 19 LLTFFCFSITISIAQNALNFDGSTDYVQTNSPGVTGTNNRTFEAWVYVSSNAPLSNLCIIDYGTNALGSRNTFMVAGNRALSFISGGTNANISSNANDVPADTWVHVAFVLNSGTGYLYRNGVQVGTGSQTSVNTPTGNQYVIVGQRVSGGS 474 +LTFF T+S AQNALNFDG DYVQTN GV TNNRTFEAWV VS NAP +NL I+DYG NA GSRNTFM+ NR L + SGGTNANIS+ + + A W HVAFVL++GTGYLY NG+Q GTGS TSVNTP+GN + +GQRVSGGS Sbjct: 12 ILTFFG---TLS-AQNALNFDGVDDYVQTNFSGVLATNNRTFEAWVNVSPNAPNANLTILDYGLNAAGSRNTFMINANRGLGYFSGGTNANISTTSVVIQAGQWTHVAFVLDNGTGYLYVNGIQSGTGSLTSVNTPSGNAKLTIGQRVSGGS 159
BLAST of mRNA_C-australica_Contig_10011.1.1 vs. uniprot
Match: A0A084JUI6_NONUL (LamGL domain-containing protein n=2 Tax=Nonlabens TaxID=363408 RepID=A0A084JUI6_NONUL) HSP 1 Score: 176 bits (445), Expect = 9.960e-51 Identity = 95/159 (59.75%), Postives = 118/159 (74.21%), Query Frame = 1 Query: 1 MTKTALLLTFFCFSITI-SIAQNALNFDGSTDYVQTNSPGVTGTNNRTFEAWVYVSSNAPLSNLCIIDYGTNALGSRNTFMVAGNRALSFISGGTNANISSNANDVPADTWVHVAFVLNSGTGYLYRNGVQVGTGSQTSVNTPTGNQYVIVGQRVSGGS 474 M KT LL F S T+ + QN LNFD + DYVQT+ GVTGT NRTFEAW+Y+S +AP +NL I+DYG N +GSRNTFMV NR LSFISGGTNANISS A +PA W VAFVL++GTG+ + NG QVGTG+ ++VNTPT + +G+RV+GG+ Sbjct: 1 MKKTLLLFFLFIGSTTLFAQTQNGLNFDSNDDYVQTSFTGVTGTTNRTFEAWIYLSPSAPNTNLAILDYGLNTVGSRNTFMVNANRGLSFISGGTNANISSTAGIIPAGQWTQVAFVLSNGTGFFFVNGNQVGTGNLSTVNTPTTGTDLRIGRRVAGGA 159
BLAST of mRNA_C-australica_Contig_10011.1.1 vs. uniprot
Match: UPI001BB69396 (T9SS type A sorting domain-containing protein n=1 Tax=Cryomorphaceae bacterium TaxID=1898111 RepID=UPI001BB69396) HSP 1 Score: 176 bits (446), Expect = 2.280e-50 Identity = 95/147 (64.63%), Postives = 111/147 (75.51%), Query Frame = 1 Query: 34 CFSITISIAQNALNFDGSTDYVQTNSPGVTGTNNRTFEAWVYVSSNAPLSNLCIIDYGTNALGSRNTFMVAGNRALSFISGGTNANISSNANDVPADTWVHVAFVLNSGTGYLYRNGVQVGTGSQTSVNTPTGNQYVIVGQRVSGGS 474 CF++ S AQNALNFDG+ DYVQT+ PGV+GT NRTFEAWVYV ++A SN+CI+DYG NA+GSRNTF V L +ISGGTNANISS P W HVAFVL +G GYLY NG QVGTGS T+VNTPTG + +G+RV GGS Sbjct: 16 CFAL-FSNAQNALNFDGTDDYVQTSYPGVSGTANRTFEAWVYVQNSAS-SNMCILDYGLNAVGSRNTFSVGPGDKLVYISGGTNANISSPNGTFPIAQWNHVAFVLENGVGYLYVNGTQVGTGSLTTVNTPTGQANMTIGERVMGGS 160
BLAST of mRNA_C-australica_Contig_10011.1.1 vs. uniprot
Match: UPI001E3DE432 (T9SS type A sorting domain-containing protein n=3 Tax=Mangrovimonas TaxID=1211036 RepID=UPI001E3DE432) HSP 1 Score: 174 bits (440), Expect = 6.470e-50 Identity = 92/149 (61.74%), Postives = 115/149 (77.18%), Query Frame = 1 Query: 28 FFCFSITISIAQNALNFDGSTDYVQTNSPGVTGTNNRTFEAWVYVSSNAPLSNLCIIDYGTNALGSRNTFMVAGNRALSFISGGTNANISSNANDVPADTWVHVAFVLNSGTGYLYRNGVQVGTGSQTSVNTPTGNQYVIVGQRVSGGS 474 FF F TI AQ +L+FDGS DY+QT GV G N+RTFEAW+YVSS+AP SNL I+DYG N +G RNTF+V G+R+L +ISGGTNANI++ AN +P TW HVAFVL++ GYLY NGVQ GTGS ++VNT +G + +GQRV+GGS Sbjct: 21 FFIFPRTIH-AQTSLSFDGSNDYIQTPFNGVLGDNDRTFEAWIYVSSSAPSSNLAILDYGHNDVGDRNTFVVGGDRSLKYISGGTNANITTAANVIPTATWTHVAFVLDNSIGYLYVNGVQEGTGSLSTVNTTSGYGNLRIGQRVTGGS 168
BLAST of mRNA_C-australica_Contig_10011.1.1 vs. uniprot
Match: UPI0006B4C485 (T9SS type A sorting domain-containing protein n=1 Tax=Mangrovimonas xylaniphaga TaxID=1645915 RepID=UPI0006B4C485) HSP 1 Score: 176 bits (446), Expect = 1.120e-48 Identity = 89/154 (57.79%), Postives = 112/154 (72.73%), Query Frame = 1 Query: 7 KTALLLTFFCFSITISIAQNALNFDGSTDYVQTNSPGVTGTNNRTFEAWVYVSSNAPLSNLCIIDYGTNALGSRNTFMVAGNRALSFISGGTNANISSNANDVPADTWVHVAFVLNSGTGYLYRNGVQVGTGSQTSVNTPTGNQYVIVGQRVSG 468 K L F S+ IS AQ LNFDG+ DYVQT+ GV G NRTFEAW+YV S P S+ I+DYGTN +GSRNTF+V + +L F+SGGTNAN+ ++ + VP D W HVAFVLN+GTGYLY NGV+ T + T+VNTP+GN+ V++G RVSG Sbjct: 7 KKVFLPAFIAGSVLISSAQTGLNFDGTDDYVQTDYAGVLGAANRTFEAWIYVPSPVPSSSFAILDYGTNDVGSRNTFLVKNDNSLKFVSGGTNANMGTDPDTVPLDVWTHVAFVLNNGTGYLYINGVEKATANLTTVNTPSGNENVLIGNRVSG 160
BLAST of mRNA_C-australica_Contig_10011.1.1 vs. uniprot
Match: A0A350JEY1_9FLAO (LamGL domain-containing protein n=1 Tax=Flavobacteriales bacterium TaxID=2021391 RepID=A0A350JEY1_9FLAO) HSP 1 Score: 173 bits (438), Expect = 4.670e-48 Identity = 93/139 (66.91%), Postives = 108/139 (77.70%), Query Frame = 1 Query: 58 AQNALNFDGSTDYVQTNSPGVTGTNNRTFEAWVYVSSNAPLSNLCIIDYGTNALGSRNTFMVAGNRALSFISGGTNANISSNANDVPADTWVHVAFVLNSGTGYLYRNGVQVGTGSQTSVNTPTGNQYVIVGQRVSGGS 474 AQNAL FDG+ DYVQT GV G+ NRTFEAWV +SS+A +N +IDYG NA+GSRNTFM+ N LSFISGGTNANI + +N V A+ W HVAFVL+SGTGYLY NG QVGTGS TSVNTPT + +GQRVSGG+ Sbjct: 25 AQNALQFDGANDYVQTTFDGVLGSTNRTFEAWVNLSSSATGNN-AVIDYGQNAVGSRNTFMINSNNGLSFISGGTNANIGTASNIVTANQWTHVAFVLDSGTGYLYLNGTQVGTGSLTSVNTPTTGTDLRIGQRVSGGN 162
BLAST of mRNA_C-australica_Contig_10011.1.1 vs. uniprot
Match: A0A2W1NFF4_9FLAO (LamGL domain-containing protein n=1 Tax=Putridiphycobacter roseus TaxID=2219161 RepID=A0A2W1NFF4_9FLAO) HSP 1 Score: 172 bits (437), Expect = 5.940e-48 Identity = 91/160 (56.88%), Postives = 114/160 (71.25%), Query Frame = 1 Query: 1 MTKTALLLTFFCFSITISIAQN-ALNFDGSTDYVQTNSPGVTGTNNRTFEAWVYVSSNAPLSNLCIIDYGTNALGSRNTFMVAGNRALSFISGGTNANISS-NANDVPADTWVHVAFVLNSGTGYLYRNGVQVGTGSQTSVNTPTGNQYVIVGQRVSGGS 474 M K LL + TIS +QN A+NFDGS DY+ T GVTG+ +RTFEAW+Y+ AP SNLC++DYGTNA G RNTFMV G+R L+ SGGT+ N+SS N NDVP W HVA VLN G GYLY NGVQVGTG+ ++TPT + + +G+RV+GG+ Sbjct: 1 MKKKLLLFMIGIATATISFSQNPAINFDGSNDYISTTFGGVTGSTDRTFEAWIYIDPTAPASNLCVLDYGTNASGDRNTFMVTGSRKLALFSGGTSGNLSSSNNNDVPVGQWTHVAAVLNGGAGYLYVNGVQVGTGTLAGISTPTTGEDMKIGRRVAGGT 160
BLAST of mRNA_C-australica_Contig_10011.1.1 vs. uniprot
Match: UPI0006B5DCFC (T9SS type A sorting domain-containing protein n=1 Tax=Mangrovimonas sp. TPBH4 TaxID=1645914 RepID=UPI0006B5DCFC) HSP 1 Score: 165 bits (418), Expect = 1.170e-46 Identity = 82/149 (55.03%), Postives = 109/149 (73.15%), Query Frame = 1 Query: 16 LLLTFFCFSITISIAQNALNFDGSTDYVQTNSPGVTGTNNRTFEAWVYVSSNAPLSNLCIIDYGTNALGSRNTFMVAGNRALSFISGGTNANISSNANDVPADTWVHVAFVLNSGTGYLYRNGVQVGTGSQTSVNTPTGNQYVIVGQRV 462 +L FF ++ AQ LNFDGS DY+QT+ GV G+ NRTFEAW+YV S P NL I+DYGTNA GSRNTF++ + +L F+SGGT AN+ ++ + VP D W HVAFVLN+GTGYLY NG + +G+ ++VNTP+GN+ V++G RV Sbjct: 10 ILTAFFAATMLTINAQTGLNFDGSNDYIQTSFAGVLGSTNRTFEAWIYVPSPGPSINLGILDYGTNAAGSRNTFLIKNDNSLKFVSGGTFANLGTDPDTVPLDAWTHVAFVLNNGTGYLYINGEEAISGNLSNVNTPSGNEDVLIGNRV 158 The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_10011.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-australica_Contig_10011.1.1 >prot_C-australica_Contig_10011.1.1 ID=prot_C-australica_Contig_10011.1.1|Name=mRNA_C-australica_Contig_10011.1.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=158bp MTKTALLLTFFCFSITISIAQNALNFDGSTDYVQTNSPGVTGTNNRTFEAback to top mRNA from alignment at C-australica_Contig_10011:3..476- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-australica_Contig_10011.1.1 ID=mRNA_C-australica_Contig_10011.1.1|Name=mRNA_C-australica_Contig_10011.1.1|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=474bp|location=Sequence derived from alignment at C-australica_Contig_10011:3..476- (Chrysoparadoxa australica CS_1217)back to top Coding sequence (CDS) from alignment at C-australica_Contig_10011:3..476- >mRNA_C-australica_Contig_10011.1.1 ID=mRNA_C-australica_Contig_10011.1.1|Name=mRNA_C-australica_Contig_10011.1.1|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=474bp|location=Sequence derived from alignment at C-australica_Contig_10011:3..476- (Chrysoparadoxa australica CS_1217)back to top |