Homology
BLAST of mRNA_C-australica_Contig_10010.1.1 vs. uniprot
Match:
A0A2D6AXP6_9BACT (Acriflavin resistance protein n=3 Tax=Cytophagales TaxID=768507 RepID=A0A2D6AXP6_9BACT)
HSP 1 Score: 436 bits (1120), Expect = 7.630e-143
Identity = 224/281 (79.72%), Postives = 255/281 (90.75%), Query Frame = 1
Query: 1 IQSNPKARDFIVEVPTIGNRFGTGLPLSYVLQCRELDELKEVLPEFIAKAKESDVFSYVDVDLRFNKPELGVRINREKAQSMGVSVRDIAQTLQLSLSGNRFGYFIMNGKQYYVIGQVEKSDRNEPLDLKSIYVKAKNGGLVQLDNLIDTEERSTPPQLFHYNRFTSATVSAALAPGISLGEGIEEMDRIADEVLDDRFQTALSGQSLEFQQSSGNLYFAFGLALILIYLVLAAQFESFRDPLTIMFTVPLALSGALLTLWYFNETLNIFSQIGMIMLIGL 843
+ +N KAR F+VE +IGNR G GLP+S+VLQ R+L++LKEVLPEF+ KA S F +VD++L+FNKPELGVRI+REKA+SMGVSVRDIAQTLQLSLSGNRFGYFIMNGKQYYVIGQ+E++DRNEPLDLKSIY+K+ +G LVQ+DNLI EERSTPPQL+HYNRFTSAT+SA+LA G +LG ++EMDRIADEVLDDRFQTALSG S EFQ+SSGNLYFAF LAL+LIYLVLAAQFESFRDPL IMFTVPLALSGALLTLWYFNETLNIFSQIGMIMLIGL
Sbjct: 639 VAANTKARAFVVEPESIGNRRG-GLPVSFVLQARQLEDLKEVLPEFLEKANASPAFDFVDLNLKFNKPELGVRIDREKARSMGVSVRDIAQTLQLSLSGNRFGYFIMNGKQYYVIGQLERADRNEPLDLKSIYIKSGSGELVQMDNLISLEERSTPPQLYHYNRFTSATISASLANGYTLGMALQEMDRIADEVLDDRFQTALSGSSKEFQESSGNLYFAFALALLLIYLVLAAQFESFRDPLIIMFTVPLALSGALLTLWYFNETLNIFSQIGMIMLIGL 918
BLAST of mRNA_C-australica_Contig_10010.1.1 vs. uniprot
Match:
A0A654DWL2_9BACT (Multidrug efflux pump n=1 Tax=Marinoscillum sp. 108 TaxID=2653151 RepID=A0A654DWL2_9BACT)
HSP 1 Score: 433 bits (1114), Expect = 5.940e-142
Identity = 225/281 (80.07%), Postives = 253/281 (90.04%), Query Frame = 1
Query: 1 IQSNPKARDFIVEVPTIGNRFGTGLPLSYVLQCRELDELKEVLPEFIAKAKESDVFSYVDVDLRFNKPELGVRINREKAQSMGVSVRDIAQTLQLSLSGNRFGYFIMNGKQYYVIGQVEKSDRNEPLDLKSIYVKAKNGGLVQLDNLIDTEERSTPPQLFHYNRFTSATVSAALAPGISLGEGIEEMDRIADEVLDDRFQTALSGQSLEFQQSSGNLYFAFGLALILIYLVLAAQFESFRDPLTIMFTVPLALSGALLTLWYFNETLNIFSQIGMIMLIGL 843
+ N KAR FI E +IG FG G+P+S+V+Q R LD+LKEVLP F+AKA + FS+VD++L+FNKPE+GVRI+REKAQ+MGVSV+DIAQTLQLSLSGNRFGYFIMNGKQYYVIGQ+EKS+RNEPLDL+SIYVKA NG LVQLDNL+ EERSTPPQLFHYNRFTSATVSA LA G+SLGEG++EMD IA+EVLDDRFQTALSG SLEFQQS+ NLYFAF LALILIYLVLAAQFESFRDPL IMFTVPLALSGALL+LWYFNE+LNIFSQIGMIMLIGL
Sbjct: 639 VAKNTKARAFINEPESIGRSFG-GMPVSFVIQARNLDQLKEVLPAFLAKASANPHFSFVDLNLKFNKPEIGVRIDREKAQTMGVSVKDIAQTLQLSLSGNRFGYFIMNGKQYYVIGQLEKSNRNEPLDLRSIYVKASNGELVQLDNLVTLEERSTPPQLFHYNRFTSATVSAKLAEGVSLGEGLKEMDLIAEEVLDDRFQTALSGTSLEFQQSASNLYFAFALALILIYLVLAAQFESFRDPLIIMFTVPLALSGALLSLWYFNESLNIFSQIGMIMLIGL 918
BLAST of mRNA_C-australica_Contig_10010.1.1 vs. uniprot
Match:
A0A3D9L3X4_MARFU (Multidrug efflux pump n=1 Tax=Marinoscillum furvescens DSM 4134 TaxID=1122208 RepID=A0A3D9L3X4_MARFU)
HSP 1 Score: 431 bits (1108), Expect = 4.620e-141
Identity = 223/281 (79.36%), Postives = 252/281 (89.68%), Query Frame = 1
Query: 1 IQSNPKARDFIVEVPTIGNRFGTGLPLSYVLQCRELDELKEVLPEFIAKAKESDVFSYVDVDLRFNKPELGVRINREKAQSMGVSVRDIAQTLQLSLSGNRFGYFIMNGKQYYVIGQVEKSDRNEPLDLKSIYVKAKNGGLVQLDNLIDTEERSTPPQLFHYNRFTSATVSAALAPGISLGEGIEEMDRIADEVLDDRFQTALSGQSLEFQQSSGNLYFAFGLALILIYLVLAAQFESFRDPLTIMFTVPLALSGALLTLWYFNETLNIFSQIGMIMLIGL 843
+ +N KAR F+ E +IG FG G+P+S+V+Q R L++LKEVLP F+ KA ++ FS+VD++L+FNKPELGVRI+REKAQSMGVSVRDIAQTLQLSLSG RFGYFIMNGKQYYVIGQ+ + DR+EPLDLKSIYVK+K+G LVQLDNL+ EERSTPPQLFHYNRFTSATVSA LA G+SLG+G+E+M+ IADEVLDDRFQTALSG SLEFQQSS NLYFAF LALILIYLVLAAQFESFRDPL IMFTVPLALSGALLTLWYFNETLNIFSQIGMIMLIGL
Sbjct: 639 VAANTKARAFVSEPESIGRSFG-GMPVSFVIQARNLEQLKEVLPGFLEKANGNEAFSFVDLNLKFNKPELGVRIDREKAQSMGVSVRDIAQTLQLSLSGTRFGYFIMNGKQYYVIGQLAREDRDEPLDLKSIYVKSKSGDLVQLDNLLSLEERSTPPQLFHYNRFTSATVSARLAEGVSLGQGLEQMNLIADEVLDDRFQTALSGTSLEFQQSSSNLYFAFALALILIYLVLAAQFESFRDPLIIMFTVPLALSGALLTLWYFNETLNIFSQIGMIMLIGL 918
BLAST of mRNA_C-australica_Contig_10010.1.1 vs. uniprot
Match:
UPI0012BD0E5E (efflux RND transporter permease subunit n=3 Tax=Fulvivirga TaxID=396811 RepID=UPI0012BD0E5E)
HSP 1 Score: 380 bits (977), Expect = 1.110e-121
Identity = 192/281 (68.33%), Postives = 235/281 (83.63%), Query Frame = 1
Query: 1 IQSNPKARDFIVEVPTIGNRFGTGLPLSYVLQCRELDELKEVLPEFIAKAKESDVFSYVDVDLRFNKPELGVRINREKAQSMGVSVRDIAQTLQLSLSGNRFGYFIMNGKQYYVIGQVEKSDRNEPLDLKSIYVKAKNGGLVQLDNLIDTEERSTPPQLFHYNRFTSATVSAALAPGISLGEGIEEMDRIADEVLDDRFQTALSGQSLEFQQSSGNLYFAFGLALILIYLVLAAQFESFRDPLTIMFTVPLALSGALLTLWYFNETLNIFSQIGMIMLIGL 843
I N +AR F+ + TIG+R G GLP+ +V+Q L++LK VLPEF KA+ S +F +VD+DL+FNKPEL V INR+KA+ +GVSVR++AQTLQL+LSG RFGYF+ +GKQYY+IGQVE+ +RN+PLDL+SIYVK G +VQ+DNL+ EE+STPPQLF YNRF SAT SA+LAPG +LG G++EMDRIA EVLD F TAL+G SLE+Q+S+ NLYFAFG ALILIYLVLAAQFESFRDPL IMFTVPLAL+G LL+LW+F ETLNIFSQIG+IMLIGL
Sbjct: 639 IAKNTRARAFVTQPQTIGDRRG-GLPVQFVIQAPNLEQLKNVLPEFQEKAQASSIFDFVDLDLKFNKPELNVTINRDKARDLGVSVRNVAQTLQLTLSGQRFGYFVKDGKQYYIIGQVERENRNDPLDLRSIYVKNDEGEIVQMDNLVTLEEKSTPPQLFRYNRFASATFSASLAPGYTLGAGLDEMDRIAAEVLDGSFSTALAGSSLEYQESANNLYFAFGFALILIYLVLAAQFESFRDPLIIMFTVPLALAGTLLSLWFFGETLNIFSQIGIIMLIGL 918
BLAST of mRNA_C-australica_Contig_10010.1.1 vs. uniprot
Match:
UPI0012BC6320 (efflux RND transporter permease subunit n=1 Tax=Fulvivirga aurantia TaxID=2529383 RepID=UPI0012BC6320)
HSP 1 Score: 377 bits (969), Expect = 1.700e-120
Identity = 192/281 (68.33%), Postives = 234/281 (83.27%), Query Frame = 1
Query: 1 IQSNPKARDFIVEVPTIGNRFGTGLPLSYVLQCRELDELKEVLPEFIAKAKESDVFSYVDVDLRFNKPELGVRINREKAQSMGVSVRDIAQTLQLSLSGNRFGYFIMNGKQYYVIGQVEKSDRNEPLDLKSIYVKAKNGGLVQLDNLIDTEERSTPPQLFHYNRFTSATVSAALAPGISLGEGIEEMDRIADEVLDDRFQTALSGQSLEFQQSSGNLYFAFGLALILIYLVLAAQFESFRDPLTIMFTVPLALSGALLTLWYFNETLNIFSQIGMIMLIGL 843
+ N +AR F+ E +IGNR G GLP+ YVLQ L++LKEV+P FI +A + VF +VDVDL+FNKPE+ + I+R+KA+ +GVSVR++AQTLQLSLSG RFGYFI +GKQY VIGQVE+ DR++PLDLKSIYV+ +GGL+Q+DNL+ E+STPPQL+ YNRF SAT+SA+L PG SLGEGI MD +A +VLD F TAL+G SLEFQQSSGNLYFAFG ALILIYLVL+AQFESFRDPL IMFTVPLAL+G LL+L++F ETLNIFSQIG+IMLIGL
Sbjct: 639 VSQNTRARAFVSEPQSIGNRRG-GLPVQYVLQAPNLEKLKEVIPSFIEEANATGVFGFVDVDLKFNKPEINIEIDRDKARDLGVSVRNVAQTLQLSLSGQRFGYFIKDGKQYQVIGQVERDDRDDPLDLKSIYVQNSDGGLIQMDNLVTLSEKSTPPQLYRYNRFASATISASLNPGYSLGEGINTMDAVAAKVLDGSFSTALAGNSLEFQQSSGNLYFAFGFALILIYLVLSAQFESFRDPLIIMFTVPLALAGTLLSLYFFGETLNIFSQIGIIMLIGL 918
BLAST of mRNA_C-australica_Contig_10010.1.1 vs. uniprot
Match:
UPI001923B449 (efflux RND transporter permease subunit n=1 Tax=Fulvivirga sediminis TaxID=2803949 RepID=UPI001923B449)
HSP 1 Score: 370 bits (951), Expect = 7.130e-118
Identity = 188/281 (66.90%), Postives = 237/281 (84.34%), Query Frame = 1
Query: 1 IQSNPKARDFIVEVPTIGNRFGTGLPLSYVLQCRELDELKEVLPEFIAKAKESDVFSYVDVDLRFNKPELGVRINREKAQSMGVSVRDIAQTLQLSLSGNRFGYFIMNGKQYYVIGQVEKSDRNEPLDLKSIYVKAKNGGLVQLDNLIDTEERSTPPQLFHYNRFTSATVSAALAPGISLGEGIEEMDRIADEVLDDRFQTALSGQSLEFQQSSGNLYFAFGLALILIYLVLAAQFESFRDPLTIMFTVPLALSGALLTLWYFNETLNIFSQIGMIMLIGL 843
I N +AR FI + TIG+ G GLP+ YV+Q +++LK+VLP F +A++S+VF ++D+DL+FNKPEL V I+R+KA+ MGVSVR+IAQTLQLSLSG RFGYF+ +GKQY +IGQVE+ +RN+PLDLKSIYVK+ +G L+Q+DNL+ E+STPPQL+ YNRF SAT SA+LAPG SLG GIEEM+RIADE+LD + T+LSG SLE+Q+S+ NLYFAFG ALILIYLVL+AQFESFRDPL IMFTVPLAL+GAL +LW F+++LNIFSQIG+IMLIGL
Sbjct: 637 IAKNTRARAFISQPQTIGDSRG-GLPVQYVVQANTVEQLKKVLPAFQERAQQSEVFDFIDLDLKFNKPELNVTIDRDKARDMGVSVRNIAQTLQLSLSGQRFGYFVKDGKQYQIIGQVERDNRNDPLDLKSIYVKSDDGQLIQMDNLVTLTEQSTPPQLYRYNRFASATFSASLAPGYSLGAGIEEMNRIADEILDSSYSTSLSGSSLEYQESASNLYFAFGFALILIYLVLSAQFESFRDPLIIMFTVPLALAGALGSLWLFDQSLNIFSQIGIIMLIGL 916
BLAST of mRNA_C-australica_Contig_10010.1.1 vs. uniprot
Match:
UPI001F35CF57 (efflux RND transporter permease subunit n=1 Tax=Fulvivirga sp. W9P-11 TaxID=2904246 RepID=UPI001F35CF57)
HSP 1 Score: 369 bits (948), Expect = 1.970e-117
Identity = 187/281 (66.55%), Postives = 233/281 (82.92%), Query Frame = 1
Query: 1 IQSNPKARDFIVEVPTIGNRFGTGLPLSYVLQCRELDELKEVLPEFIAKAKESDVFSYVDVDLRFNKPELGVRINREKAQSMGVSVRDIAQTLQLSLSGNRFGYFIMNGKQYYVIGQVEKSDRNEPLDLKSIYVKAKNGGLVQLDNLIDTEERSTPPQLFHYNRFTSATVSAALAPGISLGEGIEEMDRIADEVLDDRFQTALSGQSLEFQQSSGNLYFAFGLALILIYLVLAAQFESFRDPLTIMFTVPLALSGALLTLWYFNETLNIFSQIGMIMLIGL 843
I N +AR F+ + TIG R G GLP+ YV+Q LD+LK VLP+F KA+ S +F +VD+DL+FNKPEL V I+R+KA+ +GVSVR+IAQTLQL+LSG RFGYF+ +GKQYY+IGQVE+ +RN+PLDLKSIYV++ G L+Q+DNL+ E STPPQL+ YNRF SAT SA+LAPG +LG GIEEM+RIADEVLD + TAL+G SLE+Q+S+ NLYFAFG AL+LIYLVL+AQFESFRDPL IMFTVPLAL+GAL +LW + ++LNIFSQIG+IMLIGL
Sbjct: 637 IAKNTRARAFVSQPQTIGGR-GGGLPVQYVIQATTLDKLKAVLPQFREKAQASGIFDFVDLDLKFNKPELNVTIDRDKARDLGVSVRNIAQTLQLTLSGQRFGYFVKDGKQYYIIGQVERDNRNDPLDLKSIYVESDEGELIQMDNLVTLTEESTPPQLYRYNRFASATFSASLAPGYTLGAGIEEMNRIADEVLDGSYSTALAGSSLEYQESASNLYFAFGFALVLIYLVLSAQFESFRDPLIIMFTVPLALAGALGSLWIYGQSLNIFSQIGIIMLIGL 916
BLAST of mRNA_C-australica_Contig_10010.1.1 vs. uniprot
Match:
L8K1L6_9BACT (RND multidrug efflux transporter n=1 Tax=Fulvivirga imtechensis AK7 TaxID=1237149 RepID=L8K1L6_9BACT)
HSP 1 Score: 368 bits (944), Expect = 7.920e-117
Identity = 187/281 (66.55%), Postives = 234/281 (83.27%), Query Frame = 1
Query: 1 IQSNPKARDFIVEVPTIGNRFGTGLPLSYVLQCRELDELKEVLPEFIAKAKESDVFSYVDVDLRFNKPELGVRINREKAQSMGVSVRDIAQTLQLSLSGNRFGYFIMNGKQYYVIGQVEKSDRNEPLDLKSIYVKAKNGGLVQLDNLIDTEERSTPPQLFHYNRFTSATVSAALAPGISLGEGIEEMDRIADEVLDDRFQTALSGQSLEFQQSSGNLYFAFGLALILIYLVLAAQFESFRDPLTIMFTVPLALSGALLTLWYFNETLNIFSQIGMIMLIGL 843
I N +AR F+ + TIG+R G GLP+ +V+Q L++LKEVLPEF A+ES VF +VD+DL+FNKPEL V I+REKA+++ VSVR+IAQTLQLSLSG RFGYF+ +GKQYY+IGQVE+ +RN+PLDL+SIYVK ++Q+DNL+ +E+STPPQL+ YNRF SAT SA+L+PG +LG G++EM RI+DEVLD F TAL+G SLE+Q+S+ NLYFAF ALILIYLVL+AQFESFRDPL IMFTVPLAL+G LL+LW+F ETLNIFSQIG+IMLIGL
Sbjct: 639 IARNTRARAFVTQPQTIGDRRG-GLPVQFVIQAPNLEKLKEVLPEFQQIAQESKVFDFVDLDLKFNKPELNVTIDREKARNLKVSVRNIAQTLQLSLSGQRFGYFVKDGKQYYIIGQVERDNRNDPLDLRSIYVKNSEDDIIQMDNLVTLQEQSTPPQLYRYNRFASATFSASLSPGYTLGAGLDEMYRISDEVLDGSFSTALAGSSLEYQESANNLYFAFAFALILIYLVLSAQFESFRDPLIIMFTVPLALAGTLLSLWFFGETLNIFSQIGIIMLIGL 918
BLAST of mRNA_C-australica_Contig_10010.1.1 vs. uniprot
Match:
UPI00197A773A (efflux RND transporter permease subunit n=1 Tax=Fulvivirga lutea TaxID=2810512 RepID=UPI00197A773A)
HSP 1 Score: 367 bits (943), Expect = 1.110e-116
Identity = 188/281 (66.90%), Postives = 230/281 (81.85%), Query Frame = 1
Query: 1 IQSNPKARDFIVEVPTIGNRFGTGLPLSYVLQCRELDELKEVLPEFIAKAKESDVFSYVDVDLRFNKPELGVRINREKAQSMGVSVRDIAQTLQLSLSGNRFGYFIMNGKQYYVIGQVEKSDRNEPLDLKSIYVKAKNGGLVQLDNLIDTEERSTPPQLFHYNRFTSATVSAALAPGISLGEGIEEMDRIADEVLDDRFQTALSGQSLEFQQSSGNLYFAFGLALILIYLVLAAQFESFRDPLTIMFTVPLALSGALLTLWYFNETLNIFSQIGMIMLIGL 843
+ N +AR F+ + TIG+R G GLP+ YVLQ LD+L EV+P F+ +A+ S VF +V VDL+FNKPE+ + I+REKA+ +GVSVR+IAQTLQLSLSG RFGYFI NGKQY +IGQVE+ DRN+PLDLKSIYV+ NG L+Q+DNL+ ER+TPPQL+ YNRF SAT+SA+L G SLG+G+ +MD I+ +VLD TAL+G SLEF+QSSGNLYFAFG ALILIYLVLAAQFESFRDPL IMFTVPLAL+G LL+L+ F ET+NIFSQIG+IMLIGL
Sbjct: 639 VAQNTRARAFVTQPQTIGDRRG-GLPVQYVLQAGTLDKLNEVIPAFLDEAQNSGVFDFVQVDLKFNKPEISIEIDREKARDLGVSVRNIAQTLQLSLSGQRFGYFIKNGKQYQIIGQVERQDRNDPLDLKSIYVQNDNGTLIQMDNLVTLTERTTPPQLYRYNRFASATISASLKEGYSLGDGLNKMDEISQKVLDGSVSTALAGTSLEFKQSSGNLYFAFGFALILIYLVLAAQFESFRDPLIIMFTVPLALAGTLLSLYLFGETMNIFSQIGIIMLIGL 918
BLAST of mRNA_C-australica_Contig_10010.1.1 vs. uniprot
Match:
A0A553FQF5_9BACT (Efflux RND transporter permease subunit n=1 Tax=Fulvivirga sp. M361 TaxID=2594266 RepID=A0A553FQF5_9BACT)
HSP 1 Score: 365 bits (938), Expect = 6.030e-116
Identity = 186/281 (66.19%), Postives = 234/281 (83.27%), Query Frame = 1
Query: 1 IQSNPKARDFIVEVPTIGNRFGTGLPLSYVLQCRELDELKEVLPEFIAKAKESDVFSYVDVDLRFNKPELGVRINREKAQSMGVSVRDIAQTLQLSLSGNRFGYFIMNGKQYYVIGQVEKSDRNEPLDLKSIYVKAKNGGLVQLDNLIDTEERSTPPQLFHYNRFTSATVSAALAPGISLGEGIEEMDRIADEVLDDRFQTALSGQSLEFQQSSGNLYFAFGLALILIYLVLAAQFESFRDPLTIMFTVPLALSGALLTLWYFNETLNIFSQIGMIMLIGL 843
+ N +AR F+ + TIGNR G LP+ YVLQ LD+LKEV+P FI +A ++ VF +V+VDL+FNKPE+ + I+R KA+ +GVSV++IAQTLQLSLSG RFGYFI +GKQY +IGQ+E+SDR++PLDLKSIY++ ++G L+Q+DNL+ EE+STPPQL+ YNRF SAT+SA+LA G SLG+GIE MD +A +VLD F TAL+G SLEF QSSGNLYFAFG AL+LIYLVLAAQFESFRDPL IMFTVPLAL+G LL+L+ F ET+NIFSQIG+I+LIGL
Sbjct: 639 VAKNTRARAFVSQPQTIGNRRGR-LPVQYVLQAPNLDKLKEVIPSFIKEANQTGVFDFVNVDLKFNKPEINIAIDRNKARDLGVSVQNIAQTLQLSLSGQRFGYFIKDGKQYQIIGQMERSDRDDPLDLKSIYIENEDGELIQMDNLVTLEEKSTPPQLYRYNRFASATISASLAAGNSLGDGIEAMDEVAAKVLDGSFSTALAGTSLEFTQSSGNLYFAFGFALVLIYLVLAAQFESFRDPLIIMFTVPLALAGTLLSLYAFGETINIFSQIGIIVLIGL 918
The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_10010.1.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 vs UniRef90 )
Total hits: 25
0 1 Expect = 7.63e-143 / Id = 79.72 Expect = 5.94e-142 / Id = 80.07 Expect = 4.62e-141 / Id = 79.36 Expect = 1.11e-121 / Id = 68.33 Expect = 1.70e-120 / Id = 68.33 Expect = 7.13e-118 / Id = 66.90 Expect = 1.97e-117 / Id = 66.55 Expect = 7.92e-117 / Id = 66.55 Expect = 1.11e-116 / Id = 66.90 Expect = 6.03e-116 / Id = 66.19 Sequence A0A2D6AXP6_9BACT A0A654DWL2_9BACT A0A3D9L3X4_MARFU UPI0012BD0E5E UPI0012BC6320 UPI001923B449 UPI001F35CF57 L8K1L6_9BACT UPI00197A773A A0A553FQF5_9BACT Pages
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Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-australica_Contig_10010.1.1
>prot_C-australica_Contig_10010.1.1 ID=prot_C-australica_Contig_10010.1.1|Name=mRNA_C-australica_Contig_10010.1.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=281bp
IQSNPKARDFIVEVPTIGNRFGTGLPLSYVLQCRELDELKEVLPEFIAKA back to top mRNA from alignment at C-australica_Contig_10010:3..845-
Legend: CDS polypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-australica_Contig_10010.1.1 ID=mRNA_C-australica_Contig_10010.1.1|Name=mRNA_C-australica_Contig_10010.1.1|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=843bp|location=Sequence derived from alignment at C-australica_Contig_10010:3..845- (Chrysoparadoxa australica CS_1217)ATCCAGTCTAATCCCAAAGCCAGGGATTTTATCGTGGAAGTACCAACAAT
TGGAAATCGATTTGGCACAGGTCTCCCATTAAGTTACGTGCTCCAATGCC
GGGAGCTTGATGAGCTTAAGGAAGTGCTCCCTGAATTCATTGCTAAAGCA
AAAGAAAGTGATGTTTTCAGTTACGTAGACGTTGATTTAAGATTTAATAA
ACCGGAACTTGGTGTAAGGATTAACCGGGAAAAAGCACAAAGCATGGGCG
TTTCAGTTCGTGACATCGCCCAAACCCTTCAATTGAGTCTAAGTGGAAAT
CGATTTGGCTACTTTATCATGAATGGTAAGCAATACTATGTAATTGGACA
GGTGGAGAAAAGTGACCGAAATGAGCCCCTCGACCTCAAATCCATCTATG
TGAAAGCCAAAAATGGAGGACTCGTGCAATTAGATAACCTGATCGATACG
GAAGAAAGATCTACCCCTCCTCAACTATTCCATTACAATCGTTTCACCTC
TGCTACAGTTTCTGCTGCTTTGGCACCTGGTATTTCACTTGGTGAGGGGA
TCGAGGAGATGGATCGCATAGCTGATGAAGTACTGGATGATCGTTTCCAG
ACGGCATTATCCGGACAATCGCTTGAGTTTCAGCAAAGCTCAGGAAATCT
CTACTTTGCCTTTGGCTTGGCACTCATTCTCATCTATCTGGTATTAGCTG
CTCAATTTGAAAGCTTTAGGGATCCATTGACCATTATGTTTACCGTGCCA
CTGGCACTTTCAGGTGCCCTACTTACTTTATGGTATTTCAATGAAACCCT
CAATATTTTCTCCCAAATTGGAATGATCATGCTCATCGGCCTG back to top Coding sequence (CDS) from alignment at C-australica_Contig_10010:3..845-
>mRNA_C-australica_Contig_10010.1.1 ID=mRNA_C-australica_Contig_10010.1.1|Name=mRNA_C-australica_Contig_10010.1.1|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=843bp|location=Sequence derived from alignment at C-australica_Contig_10010:3..845- (Chrysoparadoxa australica CS_1217) back to top