mRNA_C-australica_Contig_1000.5.1 (mRNA) Chrysoparadoxa australica CS_1217

You are viewing an mRNA, more information available on the corresponding polypeptide page

Homology

BLAST of mRNA_C-australica_Contig_1000.5.1 vs. uniprot
Match: D7G5T8_ECTSI (Hypothetical leucine rich repeat protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G5T8_ECTSI)

HSP 1 Score: 181 bits (460), Expect = 1.320e-44
Identity = 136/494 (27.53%), Postives = 196/494 (39.68%), Query Frame = 3

Query:  453 LYSAVRGFLQERQGYSHVWLRDACLPP--------GMLSSELGG-----VHMGALLCTHGSLSVPPLCKKQHWFYQNEEGFSDLQLFSTNPWRALEACLLTMTGASQHFYLECG-------------------------------------------------------------------------------------------------------------------GEGYY----------TDTTDQDQTIEEGVLEILTVMGLEGSGRAVEANWKGLLDTQFLLTKACTEVSGFIQAGGALKQAVCTLSISEQQAREFCELWEMIQVGLTPIPAHEQLGLVRMLSFAVAVARCDAARALPAAGLAGVLEEAAVPVKHGYGEWRNRRGGVHLDFWMKDLSPGDLEAILAKCTVQNNSDRAHHRPVVKLTVGSSHTGGAGIGRFMGQHPELREVEVEWEGMRDIRSLCLAGAEHKSLQSLTLTHNGLGRAGA 1520
            LY+  R FL E   + H+W+  AC+PP        G + S  G      +H GAL+     L  PP  +   +  +    +SDL+++ST+PW+ALE  ++ +  +   +    G                                                                                                                   G  +Y            T  +   IE  V E L  +G+ G+    E NW+G+L   F+L K   +V  +  A GALKQA+C+LS+S  QA EF  +W+ +   L P  ++++L ++ +L FAV+VA        P+  +  VL E+ V   H             LD WMKDLSP D   IL   +       A  + +  LTVGSSHT GAG+G F+  HP LRE+E+EWEG+RD+ S+  A  EHKSL  L LTHN +G  GA
Sbjct:  107 LYATARAFLMENPEFQHIWVSAACMPPRLREQKWRGAVPSAAGSNMFEHLHPGALVACDAVLVAPPERESMSYIAEQRARYSDLEMYSTSPWKALEGVIMQLMNSVSFYAFRLGKKLIFAGPYPAYPEEPQPSPLDLRRGSAPASIVGADSPVGGRMATESPVDRAKAAAKLMFSKGTRMGWNSKSDMSAGDSLEDGRWNGWDGGGGRSTAGSTPTASVTTASVSDFSGGRSFYGGGGDVSRRRRSTPTEGSRIERAVAEALDRLGINGTHSPPERNWRGVLQPCFVLRKTRQDVEKYSDAQGALKQAMCSLSVSIDQAEEFFLVWKYL-ASLGPCASNDRLAVLNLLVFAVSVADGYCCPRRPSDFVGRVLAESLVTPGH-------------LDLWMKDLSPDDSRNILRAVS-------AAGKKLSILTVGSSHTAGAGVGSFLRGHPSLRELELEWEGVRDLSSIAQALGEHKSLTRLNLTHNEIGPRGA 579

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BLAST of mRNA_C-australica_Contig_1000.5.1 vs. uniprot
Match: A0A835Z0E5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0E5_9STRA)

HSP 1 Score: 165 bits (418), Expect = 3.680e-39
Identity = 147/524 (28.05%), Postives = 219/524 (41.79%), Query Frame = 3

Query:  228 ASVFYPELSIDHILLLPRASFLPPEGK--PSYHECCGSLQMASEVFFNNPSAQVLYVSSLEGHQLRDT---------DVDEGYPRHLYSAVRGFLQERQGYSHVWLRDACLPPGMLSSELGGVHM----------------GALLCTHGS-----------------------LSVPPLCKKQHWFYQNEEGFSDLQLFSTNPWRALEACLLTMTGASQHFYLECGGEGYYT-----DTTDQDQTIEEGVLEILTVMGLEGSGRAVEANWKGLLDTQFLLTKACTEVSGFIQAGGALKQAVCTLSISEQQAREFCELWEMIQVGLTPIPAH--EQLGLVRMLSFAVAV-ARCDAARALPAAGLAGVLEEA-AVPVKHGYGEWRNRRGGVHLDFWMK-------------DLSPGDLEAILAKCTVQNNSDRAHHR--------PVVKLTVGSSHTGGAGIGRFMGQHPELREVEVEWEGMRDIRSLCLAGAEHKSLQSLTLTHNGLGRAGAECLGEMLMTNSSI 1559
            A  F+P LS+D ++ +PR+  L  + K  P Y E    L   ++V   +P+A++LY+S +   ++ D            +      L+ AV  FLQ+   ++ VW    CL  G  ++  GG +M                G +L                            L VPP               +DL+  +  PW ALE   L + GA  H       +  Y+     D  D  + +  G+ E +    L      V  NW+       L+     +VSG  QAGGAL+QA+C++S+++ QA EF   W  +  G     A   E+L ++ +L F VA   R  A    P    A +LE   A+P   G        GG+ LD WM              DLSP DL A+L       ++  A           P+ +LTVGSSH+GGAG+G F+  +  L  +E+EWE +RD+  +C        L +L LTHN +G  G   L   LM N+S+
Sbjct:   19 AGTFFPALSLDTLVFVPRSVLLDGQRKVLPLYGEVQRHLVDYNKVCAKHPNAKLLYLSYIPAERVPDKYGQRRSILGSEERQLWEELFGAVAAFLQDHTEFAFVWAPRCCLG-GAKATLPGGANMLEHCNPLALLVRDAACGTMLXXXXXXXXXXXXXXXXXXXXXXXACDTVLLVPPQRHPGDCASPTMHDHTDLRCCTDYPWVALETIYLHLAGAQGHVLFRYEEQRTYSELVGSDRQDVGKALCGGINETIDAYALCYED-PVRKNWEHANLQNTLMDCVRKDVSGLCQAGGALRQAICSMSVTQPQAVEFTRTWHALLEGRWNACADKAERLAVLNLLHFGVAFFERRIAPPRAPGYAEATLLESLDAIPEGEG--------GGLALDLWMXXXXXXXXXXXXXXDLSPLDLCAVLEAARAHQSTSNAGGAAAGGKPTGPICRLTVGSSHSGGAGVGEFLAFNRALHTLEIEWEAVRDVEHICEGLRHAPGLLTLNLTHNSIGAEGGVQLARALMENTSL 532

The following BLAST results are available for this feature:

BLAST of mRNA_C-australica_Contig_1000.5.1 vs. uniprot

BLAST of mRNA_C-australica_Contig_1000.5.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 2

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POSITION

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Match Name	E-value	Identity	Description
D7G5T8_ECTSI	1.320e-44	27.53	Hypothetical leucine rich repeat protein n=2 Tax=E...	[more]
A0A835Z0E5_9STRA	3.680e-39	28.05	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]