Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 1 |
| Start | 1 |
| Model size | 1387 |
| Hectar predicted targeting category | other localisation |
| Exons | 11 |
| Cds size | 609 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1682586735.4666204-UTR-C-australica_Contig_1000:8258..8283 | 1682586735.4666204-UTR-C-australica_Contig_1000:8258..8283 | Chrysoparadoxa australica CS_1217 | UTR | C-australica_Contig_1000 8259..8283 + |
| 1682586735.4749298-UTR-C-australica_Contig_1000:8435..8651 | 1682586735.4749298-UTR-C-australica_Contig_1000:8435..8651 | Chrysoparadoxa australica CS_1217 | UTR | C-australica_Contig_1000 8436..8651 + |
| 1682586735.484395-UTR-C-australica_Contig_1000:8773..8854 | 1682586735.484395-UTR-C-australica_Contig_1000:8773..8854 | Chrysoparadoxa australica CS_1217 | UTR | C-australica_Contig_1000 8774..8854 + |
| 1682586735.4938715-UTR-C-australica_Contig_1000:8999..9152 | 1682586735.4938715-UTR-C-australica_Contig_1000:8999..9152 | Chrysoparadoxa australica CS_1217 | UTR | C-australica_Contig_1000 9000..9152 + |
| 1682586735.576176-UTR-C-australica_Contig_1000:10939..11242 | 1682586735.576176-UTR-C-australica_Contig_1000:10939..11242 | Chrysoparadoxa australica CS_1217 | UTR | C-australica_Contig_1000 10940..11242 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1682586735.502907-CDS-C-australica_Contig_1000:9152..9166 | 1682586735.502907-CDS-C-australica_Contig_1000:9152..9166 | Chrysoparadoxa australica CS_1217 | CDS | C-australica_Contig_1000 9153..9166 + |
| 1682586735.5116327-CDS-C-australica_Contig_1000:9255..9346 | 1682586735.5116327-CDS-C-australica_Contig_1000:9255..9346 | Chrysoparadoxa australica CS_1217 | CDS | C-australica_Contig_1000 9256..9346 + |
| 1682586735.5207324-CDS-C-australica_Contig_1000:9594..9678 | 1682586735.5207324-CDS-C-australica_Contig_1000:9594..9678 | Chrysoparadoxa australica CS_1217 | CDS | C-australica_Contig_1000 9595..9678 + |
| 1682586735.529727-CDS-C-australica_Contig_1000:9998..10115 | 1682586735.529727-CDS-C-australica_Contig_1000:9998..10115 | Chrysoparadoxa australica CS_1217 | CDS | C-australica_Contig_1000 9999..10115 + |
| 1682586735.5386643-CDS-C-australica_Contig_1000:10204..10277 | 1682586735.5386643-CDS-C-australica_Contig_1000:10204..10277 | Chrysoparadoxa australica CS_1217 | CDS | C-australica_Contig_1000 10205..10277 + |
| 1682586735.5475097-CDS-C-australica_Contig_1000:10412..10478 | 1682586735.5475097-CDS-C-australica_Contig_1000:10412..10478 | Chrysoparadoxa australica CS_1217 | CDS | C-australica_Contig_1000 10413..10478 + |
| 1682586735.5572228-CDS-C-australica_Contig_1000:10694..10818 | 1682586735.5572228-CDS-C-australica_Contig_1000:10694..10818 | Chrysoparadoxa australica CS_1217 | CDS | C-australica_Contig_1000 10695..10818 + |
| 1682586735.5668154-CDS-C-australica_Contig_1000:10899..10939 | 1682586735.5668154-CDS-C-australica_Contig_1000:10899..10939 | Chrysoparadoxa australica CS_1217 | CDS | C-australica_Contig_1000 10900..10939 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-australica_Contig_1000.4.1 >prot_C-australica_Contig_1000.4.1 ID=prot_C-australica_Contig_1000.4.1|Name=mRNA_C-australica_Contig_1000.4.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=203bp
MLQSRYMMGRGAPTGHSGDEHTWWSEIQPVTVPQQEKALQICKAPAGGGE
GAHWTRFETTKLEVSQQVLGHCVTFLRVRAHLFPLEPLDFSQLGEVLAAC
VKVYQIQEGKAQASGDGMITGGGPADGTSAAAITGYEFLSASTSYIVEGL
LAALYDLVSATKGAENARLSAALMPSLEALINETKPFLSRAARRIMEKLS
AN* back to topmRNA from alignment at C-australica_Contig_1000:8259..11242+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_C-australica_Contig_1000.4.1 ID=mRNA_C-australica_Contig_1000.4.1|Name=mRNA_C-australica_Contig_1000.4.1|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=2984bp|location=Sequence derived from alignment at C-australica_Contig_1000:8259..11242+ (Chrysoparadoxa australica CS_1217)
GAGTGCGCTTACGTTCATTACGCAGGTATGACAAGACAGGCATGCATGAG
CCAAGCCTGGCTTAGCTTACCTTCTTATGTGACCGAGCCAGGCCCTGACT
AGTAGCATCAGGTAGCACACTTGTAGTAGCTGCATACTAGTAGTAGTTGT
ATCTTACGAAACGCTGTCCCATCACAGGTAGCTTGCAGTCGTGATGGTGC
ACTGGCCTTAGTGGACTGCAGGGTACTGGAACACTTAACGGAAAGCAGCT
TGCTTGCTGCTCCTGCTGCTCCTGCTGCTGCTGGTGCTGGGGCTGGTGCA
GTTGCAGGGGGTGAGCACTCATGGCTACAGGCATTGAGGTTATTAGAGGC
TACAGTCTCAAGCTTGCCTGACAATGAGAAAGTCATCACCCAGGTACGCT
GGTGACGCGTGCTCAGATGAGTGAGCGCACACTGAAAGATGATTGAGAGC
AACCTCCAGTGATGTGTAAGAGACACCCATACTCTTCTGGCCCTTGACCT
TTTGGCACTCGTCAGGTATTGGAGCTCTTGCGGCATCACCACAAGCTCTG
CAGCCACTTACTCAAGCTGAGAAGCCCAAGTTGCACAGGGCTGCAGGTGG
GAACTGCTTGACTGTAACAAGCGCCTGCACTGCACCAAACCGCACAAACG
CTCTTCTGCTCACTTATTTTCCCTTTGCTTGGCTTGTGCTGCTCCTCTCT
CTCACACAACGTAATGCAACACTCTTCTTTTCATGCCACAGGCTGCTGGA
TGCGTCGTAAGCCTGCTTGGTCACTGTACCAAGTCACCCTATGAGGGCCT
CTATCAAGAGAGGCTGGGCAGATACAGCGATAAGCTCAGCGCCCAGGTCA
AGGGATTGTTACTGAGGCTTGGGAAGTATCCCTACCCAGCTTGGATGCTG
CAGAGCCGGTAATGATATCATGGCACCGGCAAATCATAGCCATGCCATAG
CACTGGCAACTGCATCTAACACCACCATGGTTGGTTGCCTGTGTCAGGTA
TATGATGGGAAGGGGAGCTCCCACAGGTCACTCTGGTGATGAACACACTT
GGTGGAGTGAAATACAGCCTGTCACTGTTCCGCAGCAGGTGCGTCGAGAG
ATGCATTCGTGTTATGCCGTCCCGTCATGCACTTGTTGCTCCCCCTGCCA
GTGATGTCTGCTTATCGCTACAACAGACAGCCATTGCAACTCCTCAATGT
TTTGTTGCAATGAAATGTATGCATGCTGGCAGACCCCCAGTCACCAATGG
CCAAATGGCTCGTTTGCCTTTGCCTTTGCCTTGAGCCTGAGGTAGCACTG
AAGTATTATTATTGTGGACTCTCTCTCTCATCTCAGGAGAAGGCCCTGCA
GATCTGTAAAGCACCAGCAGGTGGGGGGGAGGGAGCGCATTGGACTCGCT
TTGAGACGACAAAGCTGGAGGTGAAGAACCTAGTGTTGACTGGTTTGACA
ACTCTTGATTCTTTCAACGGCCCTCCACTCGATTGAATGATTATTGATTG
GTCTTTGAATGACTGATGCTGATGCGTAGAGCCTTGCTTTTTTAAGATGA
TGCTGTGCGTTCGTTTGAGTGAATGCTGGGTCATCAGTCTTGATGGCCAT
GATGTAGCGTAGTGTGACCAAACTGCGTCTTCCATGTCTTGAGTGCTTGG
CTTGAGCTTGCGGGCGACTGGGATCAGCTGGCTTGTTCTCTCACTTCACA
CTTTTGTGTTTGCACTTCCACGATGCTCCTGCTCCTCCAGGTTTCACAAC
AGGTTCTCGGGCATTGCGTGACTTTCTTACGCGTCCGTGCCCATCTCTTC
CCATTGGAGCCTCTGGACTTCTCTCAGCTCGGTGAAGTGCTGGCAGCCTG
TGTGAAGGCAAGATGAGGAAAAGCTGCTTGGCTGCACTTGCCCCTAATTA
TGTCATCTCATACCACACTCACTCACAGCACCCACCTCTCACTCAGGTGT
ACCAGATACAAGAGGGCAAAGCACAAGCATCAGGGGATGGCATGATTACT
GGGGGAGGGCCAGCTGATGGTGAGGAGCCTCCCCCTTAAAAGACTCCACC
TTGCTATTGAGTTGCATGAGTTGCATGGATGCTTTCATGTTGAGTGCGTT
GACCTTCACTCATCAGAATGCTTCGCATCGCTCCGCATTGCTTTGCTCTC
TCAGGAACTTCTGCTGCAGCAATTACAGGTTATGAGTTTTTGTCGGCAAG
CACCAGCTACATAGTTGAGGGTACGTTTGTGTAACTCTTACCACTGCTCA
CAACCTTACGTTGCTCCCAAGTTAATCTCATTTGGCTTAAGTTATGATTT
ATCTTTTTGCTTTTGCTTGCTAGCTTACTGGACAAGATGCCTCCTCCCCT
CAGTTAATCACTCACTCGCATTCAGCCACGACCACTACCACCAGTGCTAA
CTTTCGCTTGACCCATTGATCCTTTTCCATGAACAGGGCTACTAGCTGCT
CTCTATGACTTGGTTTCTGCAACAAAAGGAGCCGAGAATGCCAGGCTCTC
AGCTGCCCTTATGCCCTCATTGGAGGCCCTTATCAATGAGACTAAGCCCT
TCCTTAGCAGGTCAGTTGCATCACTTGCATCATTTGCATCTAACTTGTCT
TCTCTTGCTCACTGGCTTGACTTGCTCTTGCACTTCCTCAGAGCTGCGAG
AAGGATCATGGAGAAGCTCTCAGCTAACTGAGAACTGATGTGGGAGAGCT
AGCTCAACACAGGCAAACCTGCTCAACCTGCTGAACTGCTGGATGGGGAA
AGCTATGTCATGGGGCTGTCCATGCTGCGACTCTGCTTCTGTTTTGCGTG
TTCATCGGCTTGCTTGTCTTGTCACGTATCATGCTTTATGACAGTGCACT
GCACAGGTGCAGGATATGCAACTGCACAAGCTACAGAGATAGGAGGGGGG
GGAGGAATCCTCACATATTTTCTTTTCTAGATCCTAGATAACACTGGTGA
TGTGACACTAGGCAGGCTAGGCTTAAGCTTTATT back to topCoding sequence (CDS) from alignment at C-australica_Contig_1000:8259..11242+ >mRNA_C-australica_Contig_1000.4.1 ID=mRNA_C-australica_Contig_1000.4.1|Name=mRNA_C-australica_Contig_1000.4.1|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=609bp|location=Sequence derived from alignment at C-australica_Contig_1000:8259..11242+ (Chrysoparadoxa australica CS_1217)
ATGCTGCAGAGCCGGTATATGATGGGAAGGGGAGCTCCCACAGGTCACTC
TGGTGATGAACACACTTGGTGGAGTGAAATACAGCCTGTCACTGTTCCGC
AGCAGGAGAAGGCCCTGCAGATCTGTAAAGCACCAGCAGGTGGGGGGGAG
GGAGCGCATTGGACTCGCTTTGAGACGACAAAGCTGGAGGTTTCACAACA
GGTTCTCGGGCATTGCGTGACTTTCTTACGCGTCCGTGCCCATCTCTTCC
CATTGGAGCCTCTGGACTTCTCTCAGCTCGGTGAAGTGCTGGCAGCCTGT
GTGAAGGTGTACCAGATACAAGAGGGCAAAGCACAAGCATCAGGGGATGG
CATGATTACTGGGGGAGGGCCAGCTGATGGAACTTCTGCTGCAGCAATTA
CAGGTTATGAGTTTTTGTCGGCAAGCACCAGCTACATAGTTGAGGGGCTA
CTAGCTGCTCTCTATGACTTGGTTTCTGCAACAAAAGGAGCCGAGAATGC
CAGGCTCTCAGCTGCCCTTATGCCCTCATTGGAGGCCCTTATCAATGAGA
CTAAGCCCTTCCTTAGCAGAGCTGCGAGAAGGATCATGGAGAAGCTCTCA
GCTAACTGA back to top
|