mRNA_C-australica_Contig_10.12.3 (mRNA) Chrysoparadoxa australica CS_1217

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-australica_Contig_10.12.3
Unique NamemRNA_C-australica_Contig_10.12.3
TypemRNA
OrganismChrysoparadoxa australica CS_1217 (Chrysoparadoxa australica CS_1217)
Homology
BLAST of mRNA_C-australica_Contig_10.12.3 vs. uniprot
Match: A0A836CAP1_9STRA (GDT1 family protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAP1_9STRA)

HSP 1 Score: 291 bits (746), Expect = 1.350e-93
Identity = 174/332 (52.41%), Postives = 209/332 (62.95%), Query Frame = 1
Query:   22 KRSSALMWGLYILVLLALLVCCHGLDVQKEMLRWDADKSGCIEMGELAIMLRHYMGD------QKEGILP----ASADTAGLP--------FWPAFTSSVGMIIATEIGDKTFFIAAVLAMQHPRLLVFGGAIAALAVMTVLSALLGYALPNVLSRQYTHYASAFLFLYFGAKMIKEGMDAKGSGPSEELAEVEEEXXXXXXXXXXXXXXXKAAHESGYGTNGDKEMESEK----------EKAPLTIFWQGFTLTFLAEWGDRSQIATIALAAAKDLLGVTVGGVLGHSLCTGMAVLGGRMLAARISEKTVHLVGGGLFLLFGLHSLVFGM 933
             R +A++ G  I+ LLA  V    L   +   + D + +G ++ GE A                 EG       A   + G+P        FW  F S VGMIIATEIGDKTFFIAA++AMQ+ R+LVF GAI ALA+MTVLSA LG+ALPN+L R+YTHYA A LFLYFG KM+KEG +A   GPSEELAEVE+E               +    SG G                     +K    +F QG TLTFLAEWGDRSQIATIALAAAKD++GVTVGG+LGHSLCTGMAV+GGR+LAARISE+TVHLVGGGLFL+FGLHSL+FG+
Sbjct:    3 SRHAAVVAGALIVCLLA--VTAAALSTDQAFAQADKNHNGSLDKGEFAAFAERLQAQIASVLGNGEGAAAKLDSAGGGSLGVPTWLAGGPGFWGGFVSGVGMIIATEIGDKTFFIAAIMAMQYSRMLVFAGAITALAIMTVLSAALGFALPNILPREYTHYAGALLFLYFGVKMLKEGFEADDGGPSEELAEVEQELMLKRNADEGDV---EQTPHSGNGXXXXXXXXXXXXXXXXXXXADKKDAWGVFSQGLTLTFLAEWGDRSQIATIALAAAKDVVGVTVGGILGHSLCTGMAVVGGRLLAARISERTVHLVGGGLFLVFGLHSLIFGL 329          
BLAST of mRNA_C-australica_Contig_10.12.3 vs. uniprot
Match: D7FN76_ECTSI (GDT1 family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FN76_ECTSI)

HSP 1 Score: 276 bits (707), Expect = 1.800e-88
Identity = 155/251 (61.75%), Postives = 178/251 (70.92%), Query Frame = 1
Query:  187 GDQKEGILPAS-ADTAGLPFWPAFTSSVGMIIATEIGDKTFFIAAVLAMQHPRLLVFGGAIAALAVMTVLSALLGYALPNVLSRQYTHYASAFLFLYFGAKMIKEGMDAKGSGPSEELAEVEEEXXXXXXXXXXXXXXXKAAHESG--YGTNGDKEMESEKEKAPLTIFWQGFTLTFLAEWGDRSQIATIALAAAKDLLGVTVGGVLGHSLCTGMAVLGGRMLAARISEKTVHLVGGGLFLLFGLHSLVFG 930
            GD  E  + A   +   + FW AF +SV MIIATEIGDKTFFIAA++AM HPRL VFGGA+ ALAVMTVLSA LGYALP +L R YTHYASA LFLYFG +M+KEGM++ G GPSEEL EVEEE                   E G   G  G   + S +      +    F++TFLAEWGDRSQIATIALA  KD  GVT GGV+GHSLCTGMAV+GG++LAARISEKTVHLVGG LFL+FGLH+LVFG
Sbjct:   29 GDMNENAVSAGEGEPPQVGFWTAFANSVAMIIATEIGDKTFFIAAIMAMSHPRLAVFGGAVGALAVMTVLSAALGYALPAILPRTYTHYASALLFLYFGFRMLKEGMESHG-GPSEELTEVEEELAKKREGEAKKSGPAAFDMEGGGAIGGAGGGGVRSRRG----AVMTMSFSMTFLAEWGDRSQIATIALATNKDPFGVTAGGVIGHSLCTGMAVIGGKLLAARISEKTVHLVGGALFLVFGLHALVFG 274          
BLAST of mRNA_C-australica_Contig_10.12.3 vs. uniprot
Match: A0A7S3UU97_HETAK (GDT1 family protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UU97_HETAK)

HSP 1 Score: 263 bits (672), Expect = 4.470e-83
Identity = 159/238 (66.81%), Postives = 182/238 (76.47%), Query Frame = 1
Query:  214 ASADTAGLPFWPAFTSSVGMIIATEIGDKTFFIAAVLAMQHPRLLVFGGAIAALAVMTVLSALLGYALPNVLSRQYTHYASAFLFLYFGAKMIKEGMDAKGSGPSEELAEVEEEXXXXXXXXXXXXXXXKAAHESGYGTNGDKEMESEKEKAPLTIFWQGFTLTFLAEWGDRSQIATIALAAAKDLLGVTVGGVLGHSLCTGMAVLGGRMLAARISEKTVHLVGGGLFLLFGLHSLVF 927
            A AD A L F PAF  SV MI+ATE+GDKTFFIAA+LAM+H R L+FGGAI ALA+MTVLS L+G+ALP+++ R YTHYASA LFLYFG +++K+G   +G GPSEELAEVE  XXXXXXXXXXXXXXX     +  G           ++    I  Q FTLTFLAEWGDRSQIATIALAAAKD  GVT GG +GH+LCTG+AV+GGRMLAARISEKTVHL GG LFLLF  HSL F
Sbjct:   55 AVADAASLKFMPAFVKSVLMIVATELGDKTFFIAAILAMRHSRFLIFGGAIGALALMTVLSTLMGFALPSLIPRTYTHYASALLFLYFGVRLLKDGAGMEGGGPSEELAEVEXXXXXXXXXXXXXXXXXXXXSPTHVG-----------KRTNCQIAAQAFTLTFLAEWGDRSQIATIALAAAKDPYGVTAGGCIGHALCTGLAVVGGRMLAARISEKTVHLTGGALFLLFAAHSLFF 281          
BLAST of mRNA_C-australica_Contig_10.12.3 vs. uniprot
Match: A0A7R9YEB3_9STRA (GDT1 family protein n=2 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YEB3_9STRA)

HSP 1 Score: 258 bits (658), Expect = 2.180e-80
Identity = 146/256 (57.03%), Postives = 180/256 (70.31%), Query Frame = 1
Query:  199 EGILPASADTAGLPFWPAFTSSVGMIIATEIGDKTFFIAAVLAMQHPRLLVFGGAIAALAVMTVLSALLGYALPNVLSRQYTHYASAFLFLYFGAKMIKEGMDAKGSGPSEELAEVEEEXXXXXXXXXXXXXXXKAAHESGYGTNG---DKEMESEKEKAPLT---------IFWQGFTLTFLAEWGDRSQIATIALAAAKDLLGVTVGGVLGHSLCTGMAVLGGRMLAARISEKTVHLVGGGLFLLFGLHSLVFG 930
            E +L    +  GL F PAF  S+ MII TE+GDKTFFIAAVLAM+H R+LVF GA++ALA+MTVLS ++GY LP++L R YTH+ASA LFLYFG +++ E  +   SGPSEEL EVEEE                  H+   G +G   D E +++ +KA +          IF Q FTLTFLAEWGDRSQIATIALA+AKD LGVT GGV+GH LCTG+AV+GGR+LAARISEKTV +VGG LFLLF LH+ ++G
Sbjct:   87 EDVLEHIPEVVGLGFVPAFVKSLAMIIVTELGDKTFFIAAVLAMKHSRMLVFAGALSALALMTVLSTMVGYTLPSLLPRAYTHFASAILFLYFGVRLLYESRELS-SGPSEELREVEEELI----------------HKKDQGPDGSLRDPEDDAKLKKAAVQASVLDEQSKIFAQSFTLTFLAEWGDRSQIATIALASAKDPLGVTAGGVIGHGLCTGLAVVGGRILAARISEKTVSIVGGILFLLFALHAFIWG 325          
BLAST of mRNA_C-australica_Contig_10.12.3 vs. uniprot
Match: A0A7S2HJF0_9STRA (GDT1 family protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2HJF0_9STRA)

HSP 1 Score: 258 bits (658), Expect = 3.260e-80
Identity = 139/239 (58.16%), Postives = 170/239 (71.13%), Query Frame = 1
Query:  211 PASADTAGLPFWPAFTSSVGMIIATEIGDKTFFIAAVLAMQHPRLLVFGGAIAALAVMTVLSALLGYALPNVLSRQYTHYASAFLFLYFGAKMIKEGMDAKGSGPSEELAEVEEEXXXXXXXXXXXXXXXKAAHESGYGTNGDKEMESEKEKAPLTIFWQGFTLTFLAEWGDRSQIATIALAAAKDLLGVTVGGVLGHSLCTGMAVLGGRMLAARISEKTVHLVGGGLFLLFGLHSLVF 927
            P   D     FW AF +S  MII TEIGDKTFFIAAVLAM+H R  +F GA+AALA+MTVLSA +G+ALPN+L R+YTHYASA LFLYFG +++K+  + +G GPS+EL EVEEE               K  +E+      + +    K      I  Q FTLTFLAEWGDRSQIATIALAAAKD  GVT+GG++GHSLCTG+AV+GGR+LAARISEKTV +VGG LFL+F +HS ++
Sbjct:  106 PLVGDLDSKSFWAAFINSWLMIIVTEIGDKTFFIAAVLAMRHSRGAIFTGAVAALALMTVLSAAMGFALPNLLPRKYTHYASALLFLYFGIRLLKDASEMRGGGPSDELQEVEEELISK-----------KDCNETSLENGQESKSGRMKNGDTTRIITQAFTLTFLAEWGDRSQIATIALAAAKDPFGVTLGGIIGHSLCTGIAVVGGRLLAARISEKTVAMVGGTLFLIFAVHSFIY 333          
BLAST of mRNA_C-australica_Contig_10.12.3 vs. uniprot
Match: F0Y333_AURAN (GDT1 family protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y333_AURAN)

HSP 1 Score: 246 bits (628), Expect = 2.720e-77
Identity = 135/237 (56.96%), Postives = 167/237 (70.46%), Query Frame = 1
Query:  241 FWPAFTSSVGMIIATEIGDKTFFIAAVLAMQHPRLLVFGGAIAALAVMTVLSALLGYALPNVLSRQYTHYASAFLFLYFGAKMIKEGMDAKGSGPSEELAEVEEEXXXXXXXXXXXXXXXKAAHESGYGTNGDKEMESEKEKAP--------LTIFWQGFTLTFLAEWGDRSQIATIALAAAKDLLGVTVGGVLGHSLCTGMAVLGGRMLAARISEKTVHLVGGGLFLLFGLHSLVF 927
            F  AF +S+GMI ATEIGDKTFFIAA+LAM+H RL++F GA++ALAVMTVLSA +GYALP ++ R YTHYASA LF YFG +M+K+     GSG SEEL EVEEE                     G   +G K++E +  +AP        + +  Q F LTFLAEWGDRSQIATIALA+AKD  GVT GG++GHS+CTG+AV+GGRMLA+RISEK VH+VGG +FL+F  +S  F
Sbjct:    1 FAAAFVNSMGMIWATEIGDKTFFIAAILAMKHARLVIFLGAVSALAVMTVLSAAMGYALPALMPRTYTHYASALLFFYFGCRMLKDASSMSGSGVSEELGEVEEEL--------------------GGAGHGKKDVEDDGAEAPPPAEETDAVKVLGQAFMLTFLAEWGDRSQIATIALASAKDPYGVTAGGIVGHSMCTGLAVVGGRMLASRISEKHVHVVGGLIFLVFAAYSFFF 217          
BLAST of mRNA_C-australica_Contig_10.12.3 vs. uniprot
Match: A0A4D9CVK3_9STRA (GDT1 family protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CVK3_9STRA)

HSP 1 Score: 251 bits (641), Expect = 3.150e-77
Identity = 148/283 (52.30%), Postives = 174/283 (61.48%), Query Frame = 1
Query:  190 DQKEGILPASADTAGLPFWPAFTSSVGMIIATEIGDKTFFIAAVLAMQHPRLLVFGGAIAALAVMTVLSALLGYALPNVLSRQYTHYASAFLFLYFGAKMIKEGMDAKGSGPSEELAEVEEEXXXXXXXXXXXXXXXKAAHESG----------------------------------YGTNGDKEMESEKEK--APLTIFWQGFTLTFLAEWGDRSQIATIALAAAKDLLGVTVGGVLGHSLCTGMAVLGGRMLAARISEKTVHLVGGGLFLLFGLHSLVFG 930
            +++EG      ++    FWPAF +S+ MI+ TE+GDKTFFIAAVLAM++ RLL+FGGAI+AL +MT+LSA +G  LPNVL R YTHYASA LFLYFG K+I E    +GSGPS+EL EVEEE                   E+G                                  +G  G       K K  A   +F Q  TLTFLAEWGDRSQIATIALAAAKD  GVT GG+LGHSLCTG+AVLGGRMLAARISEKTV   GG LFL+F  HSL+ G
Sbjct:   88 NKEEGDRGVEEESLSRGFWPAFLNSLSMILVTELGDKTFFIAAVLAMRYDRLLIFGGAISALIIMTILSAAIGNVLPNVLPRIYTHYASALLFLYFGIKLIVEARGMEGSGPSDELQEVEEELIHKKEGRASPHTLEMTQLENGNGESHAQGSGGFEXXXXXXXXXXXXKGASPAGGAHGRMGSYAQGEGKAKGNAATKVFTQALTLTFLAEWGDRSQIATIALAAAKDPYGVTAGGILGHSLCTGLAVLGGRMLAARISEKTVASTGGVLFLVFCAHSLIVG 370          
BLAST of mRNA_C-australica_Contig_10.12.3 vs. uniprot
Match: A0A7S1CD49_9STRA (GDT1 family protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CD49_9STRA)

HSP 1 Score: 244 bits (623), Expect = 7.070e-75
Identity = 142/283 (50.18%), Postives = 178/283 (62.90%), Query Frame = 1
Query:  124 DADKSGCIEMGELAIMLRHYMGDQKEGILPASADTA-------GLPFWPAFTSSVGMIIATEIGDKTFFIAAVLAMQHPRLLVFGGAIAALAVMTVLSALLGYALPNVLSRQYTHYASAFLFLYFGAKMIKEGMDAKGSGPSEELAEVEEEXXXXXXXXXXXXXXXKAAHESGYGTNGDKEMESEK-----EKAPLTIFWQGFTLTFLAEWGDRSQIATIALAAAKDLLGVTVGGVLGHSLCTGMAVLGGRMLAARISEKTVHLVGGGLFLLFGLHSLVFGMD 936
            DA+  GC++  E A   R +      G+L    D+         L FW +F +SV MII TE+GDKTFFIAA+LAMQ+ R  VFGGAI ALA+MT LSA +G+ALP +L + YTHYA+  LF YFGAK++KE  + K   P+EEL E E E                           D+++E+ K     +K    +F Q FTLTFLAEWGDRSQIATIALA AKD +GVT+GG +GHSLCTG+AVLGG+ML++RISE+TV + GG LF LF LH L  G D
Sbjct:   89 DANGDGCVDASEFADFERDH------GLLENPVDSTVRELKKPALEFWASFGNSVIMIIVTELGDKTFFIAAILAMQYDRAPVFGGAIGALALMTALSAAIGWALPAILPKTYTHYAAVALFAYFGAKLLKEAREMKDGEPNEELEEAERELGVK-----------------------DEDVENGKIRSAIKKTAWAVFTQTFTLTFLAEWGDRSQIATIALATAKDPMGVTLGGTIGHSLCTGLAVLGGKMLSSRISERTVLIAGGVLFCLFALHGLWAGSD 342          
BLAST of mRNA_C-australica_Contig_10.12.3 vs. uniprot
Match: A0A7S2RJT4_9STRA (GDT1 family protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RJT4_9STRA)

HSP 1 Score: 239 bits (610), Expect = 5.110e-73
Identity = 129/228 (56.58%), Postives = 160/228 (70.18%), Query Frame = 1
Query:  241 FWPAFTSSVGMIIATEIGDKTFFIAAVLAMQHPRLLVFGGAIAALAVMTVLSALLGYALPNVLSRQYTHYASAFLFLYFGAKMIKEGMDAKGSGPSEELAEVEEEXXXXXXXXXXXXXXXKAAHESGYGTNGDKEMESEKEKAPLTIFWQGFTLTFLAEWGDRSQIATIALAAAKDLLGVTVGGVLGHSLCTGMAVLGGRMLAARISEKTVHLVGGGLFLLFGLHSLV 924
            FW AF +S  MII TE+GDKTFFIAAVLAM+  R  V+ GA+ ALA MTVLSA++G+ LPN+L RQYTHYASA LF+YFG K++KE  + +G GPS+EL EVE+E                 A              +   +A      Q FTLTFLAEWGDRSQIATIA+AAAKD  GVT+GG++GH++CTG+AV+GGRMLA+RISEKTV +VGG LFL F +HS++
Sbjct:  113 FWAAFLNSFLMIIVTELGDKTFFIAAVLAMRQDRWAVYLGAVGALAAMTVLSAIMGFMLPNLLPRQYTHYASAALFVYFGFKLLKEASEMEGDGPSDELQEVEDELIHKKEEGDVLENGDAVA------PGASPPSRAFANQAVTRTLTQSFTLTFLAEWGDRSQIATIAMAAAKDPFGVTIGGIIGHAICTGIAVIGGRMLASRISEKTVAIVGGVLFLGFAVHSIL 334          
BLAST of mRNA_C-australica_Contig_10.12.3 vs. uniprot
Match: A0A7S3JXQ5_9STRA (GDT1 family protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JXQ5_9STRA)

HSP 1 Score: 239 bits (609), Expect = 2.470e-72
Identity = 130/231 (56.28%), Postives = 165/231 (71.43%), Query Frame = 1
Query:  241 FWPAFTSSVGMIIATEIGDKTFFIAAVLAMQHPRLLVFGGAIAALAVMTVLSALLGYALPNVLSRQYTHYASAFLFLYFGAKMIKEGMDAKGSGPSEELAEVEEEXXXXXXXXXXXXXXXKAAHESGYGTNGDKEMESEKE--KAPLTIFWQGFTLTFLAEWGDRSQIATIALAAAKDLLGVTVGGVLGHSLCTGMAVLGGRMLAARISEKTVHLVGGGLFLLFGLHSLVF 927
            F  AF +S+GMI ATE+GDKTFFIAA+LAM+H R +VF GA+ ALA+MTVLSA LGYALP++L R YTHYASAFLF YFG +++++       GPS+EL EVE+E                + H+     N +     +K+  +    +F Q   LTFLAEWGDRSQIATIALAAAKD +GVTVGG+LGH++CTG+AVLGGRMLA+RISE+TV L GG LFL+F  +++ F
Sbjct:  123 FSKAFVNSLGMIWATELGDKTFFIAAILAMRHSRCIVFSGALLALALMTVLSAALGYALPSILPRTYTHYASAFLFFYFGIRLLRDARSMH-EGPSDELVEVEDELGGAV-----------SGHKKDTTPNNNHASHKKKKIFRTAFHVFSQSLALTFLAEWGDRSQIATIALAAAKDPIGVTVGGILGHAMCTGLAVLGGRMLASRISERTVALTGGILFLVFATYAMFF 341          
The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_10.12.3 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CAP1_9STRA1.350e-9352.41GDT1 family protein n=1 Tax=Tribonema minus TaxID=... [more]
D7FN76_ECTSI1.800e-8861.75GDT1 family protein n=1 Tax=Ectocarpus siliculosus... [more]
A0A7S3UU97_HETAK4.470e-8366.81GDT1 family protein n=1 Tax=Heterosigma akashiwo T... [more]
A0A7R9YEB3_9STRA2.180e-8057.03GDT1 family protein n=2 Tax=Pinguiococcus pyrenoid... [more]
A0A7S2HJF0_9STRA3.260e-8058.16GDT1 family protein n=1 Tax=Dictyocha speculum Tax... [more]
F0Y333_AURAN2.720e-7756.96GDT1 family protein (Fragment) n=1 Tax=Aureococcus... [more]
A0A4D9CVK3_9STRA3.150e-7752.30GDT1 family protein n=1 Tax=Nannochloropsis salina... [more]
A0A7S1CD49_9STRA7.070e-7550.18GDT1 family protein n=1 Tax=Bicosoecida sp. CB-201... [more]
A0A7S2RJT4_9STRA5.110e-7356.58GDT1 family protein n=1 Tax=Rhizochromulina marina... [more]
A0A7S3JXQ5_9STRA2.470e-7256.28GDT1 family protein n=1 Tax=Aureoumbra lagunensis ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-australica_Contig_10contigC-australica_Contig_10:32874..34976 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Chrysoparadoxa australica CS_1217 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FN76
Preferred nameTMEM165
PFAMsUPF0016
Model size1098
Max annot lvl2759|Eukaryota
Hectar predicted targeting categorysignal peptide
GOsGO:0000041,GO:0000139,GO:0000322,GO:0000323,GO:0000324,GO:0000329,GO:0003674,GO:0005215,GO:0005384,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005764,GO:0005765,GO:0005768,GO:0005769,GO:0005770,GO:0005773,GO:0005774,GO:0005794,GO:0005795,GO:0005797,GO:0005801,GO:0005802,GO:0006464,GO:0006486,GO:0006487,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0006816,GO:0006828,GO:0006873,GO:0006874,GO:0006875,GO:0006885,GO:0006996,GO:0007033,GO:0007040,GO:0008150,GO:0008152,GO:0008324,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009987,GO:0010008,GO:0012505,GO:0015075,GO:0015077,GO:0015078,GO:0015085,GO:0015291,GO:0015297,GO:0015298,GO:0015299,GO:0015318,GO:0015368,GO:0015369,GO:0015491,GO:0015672,GO:0016020,GO:0016021,GO:0016043,GO:0019538,GO:0019725,GO:0022804,GO:0022857,GO:0022890,GO:0030001,GO:0030003,GO:0030004,GO:0030641,GO:0031090,GO:0031224,GO:0031410,GO:0031901,GO:0031902,GO:0031982,GO:0031984,GO:0031985,GO:0032468,GO:0032472,GO:0032588,GO:0034220,GO:0034645,GO:0035751,GO:0036211,GO:0042592,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0043413,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044425,GO:0044431,GO:0044433,GO:0044437,GO:0044440,GO:0044444,GO:0044446,GO:0044464,GO:0046873,GO:0046915,GO:0048878,GO:0050801,GO:0051139,GO:0051179,GO:0051234,GO:0051453,GO:0055065,GO:0055067,GO:0055074,GO:0055080,GO:0055082,GO:0055085,GO:0061856,GO:0065007,GO:0065008,GO:0070085,GO:0070588,GO:0070838,GO:0071421,GO:0071704,GO:0071840,GO:0072503,GO:0072507,GO:0072511,GO:0080171,GO:0097708,GO:0098588,GO:0098655,GO:0098660,GO:0098662,GO:0098771,GO:0098791,GO:0098805,GO:0098852,GO:0099516,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576,GO:1902600
Exons8
Evalue2.99e-90
EggNOG OGsCOG2119@1|root,KOG2881@2759|Eukaryota
Ec32 ortholog descriptionUncharacterised protein family UPF0016
Ec32 orthologEc-15_003250.1
DescriptionGolgi calcium ion transport
Cds size900
COG categoryL
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-australica_Contig_10.12.3prot_C-australica_Contig_10.12.3Chrysoparadoxa australica CS_1217polypeptideC-australica_Contig_10 33033..34937 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682586731.340608-UTR-C-australica_Contig_10:32873..330321682586731.340608-UTR-C-australica_Contig_10:32873..33032Chrysoparadoxa australica CS_1217UTRC-australica_Contig_10 32874..33032 -
1682586731.4473655-UTR-C-australica_Contig_10:34937..349761682586731.4473655-UTR-C-australica_Contig_10:34937..34976Chrysoparadoxa australica CS_1217UTRC-australica_Contig_10 34938..34976 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682586731.3519483-CDS-C-australica_Contig_10:33032..331431682586731.3519483-CDS-C-australica_Contig_10:33032..33143Chrysoparadoxa australica CS_1217CDSC-australica_Contig_10 33033..33143 -
1682586731.3613799-CDS-C-australica_Contig_10:33333..334711682586731.3613799-CDS-C-australica_Contig_10:33333..33471Chrysoparadoxa australica CS_1217CDSC-australica_Contig_10 33334..33471 -
1682586731.3741076-CDS-C-australica_Contig_10:33617..336951682586731.3741076-CDS-C-australica_Contig_10:33617..33695Chrysoparadoxa australica CS_1217CDSC-australica_Contig_10 33618..33695 -
1682586731.3937898-CDS-C-australica_Contig_10:33758..339111682586731.3937898-CDS-C-australica_Contig_10:33758..33911Chrysoparadoxa australica CS_1217CDSC-australica_Contig_10 33759..33911 -
1682586731.4048536-CDS-C-australica_Contig_10:34039..341571682586731.4048536-CDS-C-australica_Contig_10:34039..34157Chrysoparadoxa australica CS_1217CDSC-australica_Contig_10 34040..34157 -
1682586731.4145396-CDS-C-australica_Contig_10:34303..344581682586731.4145396-CDS-C-australica_Contig_10:34303..34458Chrysoparadoxa australica CS_1217CDSC-australica_Contig_10 34304..34458 -
1682586731.424148-CDS-C-australica_Contig_10:34538..346161682586731.424148-CDS-C-australica_Contig_10:34538..34616Chrysoparadoxa australica CS_1217CDSC-australica_Contig_10 34539..34616 -
1682586731.4343605-CDS-C-australica_Contig_10:34868..349371682586731.4343605-CDS-C-australica_Contig_10:34868..34937Chrysoparadoxa australica CS_1217CDSC-australica_Contig_10 34869..34937 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-australica_Contig_10.12.3

>prot_C-australica_Contig_10.12.3 ID=prot_C-australica_Contig_10.12.3|Name=mRNA_C-australica_Contig_10.12.3|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=300bp
MWGLYILVLLALLVCCHGLDVQKEMLRWDADKSGCIEMGELAIMLRHYMG
DQKEGILPASADTAGLPFWPAFTSSVGMIIATEIGDKTFFIAAVLAMQHP
RLLVFGGAIAALAVMTVLSALLGYALPNVLSRQYTHYASAFLFLYFGAKM
IKEGMDAKGSGPSEELAEVEEELLKKKGGEEDVVVRKKAAHESGYGTNGD
KEMESEKEKAPLTIFWQGFTLTFLAEWGDRSQIATIALAAAKDLLGVTVG
GVLGHSLCTGMAVLGGRMLAARISEKTVHLVGGGLFLLFGLHSLVFGMD*
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mRNA from alignment at C-australica_Contig_10:32874..34976-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-australica_Contig_10.12.3 ID=mRNA_C-australica_Contig_10.12.3|Name=mRNA_C-australica_Contig_10.12.3|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=2103bp|location=Sequence derived from alignment at C-australica_Contig_10:32874..34976- (Chrysoparadoxa australica CS_1217)
GGGGCTTTGGCGTTGCCCTGCAAACGCAGCAGTGCGTTGATGTGGGGGCT CTATATTCTTGTTCTCCTGGCCCTGCTGGTCTGCTGCCATGGATTGGATG TGCAAAAGGTGAAAATCTTTGGGAACGGTGGGGGCTAGGGCTAGGGATAT GGTCAAGGAAAAGCACTCCACCAGCCCCTCCTATCGCTGCTGGGGCTTCT CCCCCTTTCCTGATGAGGAGAAAGGGCACGCTCCTTCCTTCTTTGTCAAT TTGCCTCATCACCCACCCTTCCCTATCCCTAGCTCTCCCGCCCTCCTCCC GCACGCACCCTCTCCTTAGTCACCGATGCTTGTTATCGTAACCCTCTCTG ATTTTCCCAGGAGATGCTACGATGGGATGCAGATAAGAGTGGATGTATAG AAATGGGCGAGCTGGCCATCATGCTGAGACATTACATGGTGAATACGCTT ACCGTGTCCTGGGACCTGGGTCCTCACTACTAACATCGTATTAACAGCAC CACGACAACCACAACCAGGGTGACCAAAAGGAGGGTATCCTGCCAGCGTC AGCAGACACAGCAGGGCTACCGTTCTGGCCTGCTTTTACTAGTAGTGTGG GGATGATTATTGCTACAGAGATTGGTGACAAGACGTTCTTCATAGCAGCC GTACTGGCAATGCAGCACCCAAGGCACGTCTAGTGACCAGCTACCTGCTG CAGTTGATCTGAGTGAATGCAGTTGCTACGCCTCACCTAACTGCAAGTGC AAGGGCCTGTGCAATGCATGTCACTGCAGCCCTCCAATCTCCTCACCACC ACCATGCCGCGCACATCAGGCTGCTCGTGTTTGGCGGAGCTATTGCCGCG TTGGCTGTAATGACGGTGCTCTCCGCGTTGCTCGGCTATGCTTTGCCGAA TGTGCTCTCAAGGCAGTATACACACTACGCTAGCGCGGTAAGACCCTTCA CCACACGTGCACACTTTACTTTAATATGCACATTATTACCGTCCTGTTCT ATCTCCCGCACGCATTACCATGCCGCTGCATTGTCAGTCCTGACTTCTCC GTTTGCTGCCGCCAGTTCCTTTTCCTTTACTTTGGAGCAAAGATGATCAA GGAGGGCATGGATGCCAAAGGGTCAGGCCCTTCCGAGGAGCTGGCTGAAG TGGAGGAGGAACTGCTCAAGAAGAAGGGGGGTGAAGAAGATGTGGTGGTG AGAAAAAAGGCGGCACACGTATAGTAGATCCTAGCCCCGACTTGACTTTT TTTTGCTGCTGCCTTATTATTATCGCCACAGGAAAGTGGCTATGGAACGA ACGGGGACAAGGAAATGGAATCTGAGAAGGAGAAAGCCCCTCTCACCATC TTTTGGCAGGTTTGAAGATCTCACTTTTACTCGTTGCCTCCTAACTTCTT GCCTTGCCTCAATGGTGTGATGTTCTCATCTCATGCCATCACTTCTCTCG CTAGATCCTTCGGCACCTTACACCTCCCTTGACCCCCCGTCCCTGGTGCC CTCAGGGATTCACCCTGACATTTCTGGCAGAGTGGGGAGACAGAAGCCAA ATTGCAACCATTGCACTGGCAGCTGCCAAAGATCTCCTGGGTGTTACAGT TGGGGGGGTACTGGGCCACAGTCTCTGCACGGGGATGGCTGTGGTAAGCT GCTTGCTGCTACTACATTTTTCGCTTTACAACCTCTGCGTGGCTGCCTCA TTTACTTTACCACCAGCATTGTTACTGCTGGCTGAGCTTGCCTCGCGCAA CTTACCCCCCGCTCTTTGTCCCTGCCCCTTATGCGACCCATCCACCCAGC TTACTCTTGCCCCACCACCTCGCCCTATACCAGCTAGGAGGCCGGATGCT GGCAGCGAGAATATCGGAGAAGACAGTGCACTTGGTCGGAGGAGGGCTGT TCCTTTTGTTTGGCTTGCACTCATTGGTGTTTGGAATGGATTAGTATTTC TGTCGTAGACGAGCACTACCTCAACCCCCGTGATTCAGCCGATACCCATT TCGGATTGGAAAACTCTCCCTCTCCACAAGATCCCTCACGATGCTTCTTA GTGTCACTCCCTTTTACGGCCTAGTGGCCCTCCTCCTAGAATATAATCAT CCC
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Coding sequence (CDS) from alignment at C-australica_Contig_10:32874..34976-

>mRNA_C-australica_Contig_10.12.3 ID=mRNA_C-australica_Contig_10.12.3|Name=mRNA_C-australica_Contig_10.12.3|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=900bp|location=Sequence derived from alignment at C-australica_Contig_10:32874..34976- (Chrysoparadoxa australica CS_1217)
ATGTGGGGGCTCTATATTCTTGTTCTCCTGGCCCTGCTGGTCTGCTGCCA
TGGATTGGATGTGCAAAAGGAGATGCTACGATGGGATGCAGATAAGAGTG
GATGTATAGAAATGGGCGAGCTGGCCATCATGCTGAGACATTACATGGGT
GACCAAAAGGAGGGTATCCTGCCAGCGTCAGCAGACACAGCAGGGCTACC
GTTCTGGCCTGCTTTTACTAGTAGTGTGGGGATGATTATTGCTACAGAGA
TTGGTGACAAGACGTTCTTCATAGCAGCCGTACTGGCAATGCAGCACCCA
AGGCTGCTCGTGTTTGGCGGAGCTATTGCCGCGTTGGCTGTAATGACGGT
GCTCTCCGCGTTGCTCGGCTATGCTTTGCCGAATGTGCTCTCAAGGCAGT
ATACACACTACGCTAGCGCGTTCCTTTTCCTTTACTTTGGAGCAAAGATG
ATCAAGGAGGGCATGGATGCCAAAGGGTCAGGCCCTTCCGAGGAGCTGGC
TGAAGTGGAGGAGGAACTGCTCAAGAAGAAGGGGGGTGAAGAAGATGTGG
TGGTGAGAAAAAAGGCGGCACACGAAAGTGGCTATGGAACGAACGGGGAC
AAGGAAATGGAATCTGAGAAGGAGAAAGCCCCTCTCACCATCTTTTGGCA
GGGATTCACCCTGACATTTCTGGCAGAGTGGGGAGACAGAAGCCAAATTG
CAACCATTGCACTGGCAGCTGCCAAAGATCTCCTGGGTGTTACAGTTGGG
GGGGTACTGGGCCACAGTCTCTGCACGGGGATGGCTGTGCTAGGAGGCCG
GATGCTGGCAGCGAGAATATCGGAGAAGACAGTGCACTTGGTCGGAGGAG
GGCTGTTCCTTTTGTTTGGCTTGCACTCATTGGTGTTTGGAATGGATTAG
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