mRNA_C-australica_Contig_10.1.1 (mRNA) Chrysoparadoxa australica CS_1217

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-australica_Contig_10.1.1
Unique NamemRNA_C-australica_Contig_10.1.1
TypemRNA
OrganismChrysoparadoxa australica CS_1217 (Chrysoparadoxa australica CS_1217)
Homology
BLAST of mRNA_C-australica_Contig_10.1.1 vs. uniprot
Match: A0A4D9D2W1_9STRA (MR_MLE domain-containing protein n=6 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D2W1_9STRA)

HSP 1 Score: 498 bits (1283), Expect = 4.610e-150
Identity = 288/618 (46.60%), Postives = 373/618 (60.36%), Query Frame = 1
Query:    1 VVVARTREYRFTTGLDPIDMLCRLEEQRGCLFCLMGTDGSAFVGCTPERLFRLKDGVIRSEALAGTRERGATPEADELLGRELMESEKVQLIKPSSLASLSLRPQSENAITALYLSEAFKGF---GRVTVSEPYISKQAHVQHICSLVLLFV----------SPVRDVKVSLETDADEARL--LHALHPTPAVCGAPRKEAHMVIRECESFDRGLYAGPIGYIASNDCEFCVGIRSALICQSGRKLIAYAGCGIVPGSTPEGEWQETGLGAKLKTFALLFP-PRLDLKAEPTLNSLWGTLLVEELARQGVNHFCCCPGSRSTPLTVAAVKHPLASTIVHHDERGAGFYGLGYAKATNRPCAIITSSGTAVANLLPAVVEACHGAVPLLLLTADRPSELRDTGSNQTIDQVKMFGGYVKWFKDMASPSDQIPATALLSDIGYAVQQALGLRGNSLQPGPVHVNCMFRENLAPEAGPVRELSVEGSTSDWAQPCLEKARMGQWVGSGRPLCSTLHQLGMEEQGVDEVASLVFEAKRGILVVGGLASAAERAAVRHLAGLLGWPVMADVGSGLRSEEFTATLMVKHYDQMLLEPLVTAGARPDMVLQLGSPLVSRRLVRFL 1806
            VV+AR   + F     P+D++ RL    G LFCL      AF+GCTPE+LFR+  G I +EALAGTR RG TPE DE L  ELM S K +                EN +TA  + +A +     GRV     ++ +  HVQHIC  +   +              D + S ET +  +    L ALHPTPAV G PR  A   IR+ E FDRG YAGPIG+++    EF V IRS LI +   +   +AG GIVPGST EGEW E  +GAK+  F  +FP P   L++ P L +LW TL+VEELAR GV HF   PGSRSTPL  AA +HP  + +VHHDERGAGFY LGYA+A  RP A+I +SGTAVANLLPA VEA    VPLLLLTADRP E RD G+NQT+ Q  MF  + +W KD+  P+ ++ A++LLSD+ YAV  A G       PGPVH+N M RENLAPE G VR+ +V G  S+W   CL   R  QW  S +P  +   +L        ++ + + +A+RG+LV+G L    +RA VR LA  L WP+ AD+GSGLR +     L+V  Y+ +L +PL+++   PD++LQ+GSPLVS+RL +F+
Sbjct:  267 VVLARAVHFTFPRKPRPLDLVLRLRGHYGYLFCLQLDADRAFLGCTPEQLFRVAGGAISTEALAGTRPRGQTPEEDEALAAELMASHKDRF---------------ENRVTAESIEDALRPLVQGGRVERFPAFVLRLQHVQHICHKITGRLRRRSGAASESDTQEDWRESPETCSSSSAFDFLAALHPTPAVAGEPRLTALQAIRQLEPFDRGFYAGPIGFLSRESAEFAVAIRSVLIVRE--RAHVFAGAGIVPGSTAEGEWAE--IGAKMANFVRMFPRPSPPLRSLPNLATLWATLVVEELARNGVTHFVIAPGSRSTPLVTAAARHPDTTLMVHHDERGAGFYCLGYARARGRPAAVIVTSGTAVANLLPAAVEAATDRVPLLLLTADRPPEQRDCGANQTVAQPDMFLHFARWTKDVPCPTPEVLASSLLSDVDYAVSMARGA-----DPGPVHLNFMLRENLAPEGGAVRDTAVPGLHSEWPDACLGGRRFAQWERSLQPY-TCFPRLRPSCSLSPDLLAAIHDAQRGLLVIGRLPQRRDRAHVRWLAQGLRWPIFADMGSGLRCDPALKHLLVAPYESLLADPLISSALDPDVILQIGSPLVSKRLPKFM 859          
BLAST of mRNA_C-australica_Contig_10.1.1 vs. uniprot
Match: D8LMF2_ECTSI (Similar to Isochorismate Synthase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMF2_ECTSI)

HSP 1 Score: 496 bits (1276), Expect = 5.660e-148
Identity = 309/697 (44.33%), Postives = 381/697 (54.66%), Query Frame = 1
Query:    1 VVVARTREYRFTTGLDPIDMLCRLEEQRGCLFCLMGTDGSAFVGCTPERLFRLKDGVIRSEALAGTRERGATPEADELLGRELMESEKVQLIKPSSLASLSLRPQSENAITALYLSEAFKGFGRVTV--SEPYISKQAHVQHICSLVLLFVSPVRDVKVS----LETDADEA-----------RLLHALHPTPAVCGAPRKEAHMVIRECESFDRGLYAGPIGYIASNDCEFCVGIRSALICQS---------------------------GRKLIAYAGCGIVPGSTPEGEWQETGLGAKLKTFALLFPPR--LDLKAEPTLNSLWGTLLVEELARQGVNHFCCCPGSRSTPLTVAAVKHPLASTIVHHDERGAGFYGLGYAKA----------------------------TNRPCAIITSSGTAVANLLPAVVEACHGAVPLLLLTADRPSELRDTGSNQTIDQ-----VKMFGGYVKWFKDMASPSDQIPATALLSDIGYAVQQALGLRGNSLQPGPVHVNCMFRENLAPEAGPVRELSVEGSTSDWAQPCLEKARMGQWVGSGRPLCSTLHQ---LGMEEQGVDEVASLVFEAKRGILVVGGLASAAERAAVRHLAGLLGWPVMADVGSGLRSEEFTATLMVKHYDQMLLEPLVTAGARPDMVLQLGSPLVSRRLVRFLHTTAITLCSYIQV 1845
            VV+ART   RF   L P ++L R     G LFCL     +AF+GCTPERLF  K   + +EALAGTR RG T   DE LG ELM+SEK +         L+L    ENAITA Y+S A +  G V +  SEP + +  HVQHIC  +   ++P  D   S       DA+              LL  +HPTPAVCG PR   + VI E E FDRG YAGP+GYI++   EF V IRSAL+  S                           G ++  +AG GIVPGS    EW ETG+  K+K F  LFP R    L+  P +NSLWG L+VEEL R GV HFC CPGSRS PL VA  +HP A +I HHDERGAGFY +G+A+A                                CA++TSSGTAVANLLPA  EA    + +LLLTADRP ELR  GSNQTIDQ     V + G   +   D+  P+D++ A  LLSDI +AV +ALG       PGPVH+N MFRENLAP  G VR+  V G +S W+  CL+  RM +W     P  +T      LG   +G+ +V   +  A+RGIL+VG L    ERA VRHLA  L WPV ADV SGLR       L V   DQ+L +  V     PD VLQ+GSPL S+R+ +F+   A TL + + V
Sbjct:  555 VVLARTARLRFAGPLSPPNVLARFRGHYGFLFCLQPDASTAFLGCTPERLFLSKGSTVVTEALAGTRGRGDTTTEDERLGEELMDSEKFRGGGGGLRVVLALVDVRENAITADYVSAALRKAGAVKLNCSEPSLKRLTHVQHICRRITATLAPGTDNDCSEGGFCRDDAEGGGQGRGAGGAGRSLLREMHPTPAVCGTPRDVTYSVIGEVEGFDRGFYAGPVGYISAGASEFGVAIRSALVTDSWSSPEGFSRRGGVLGSAGGPAARGVGGGSEMTLFAGAGIVPGSVALLEWAETGV--KMKNFLSLFPARPVRGLREMPNVNSLWGALVVEELVRLGVRHFCVCPGSRSAPLAVAIARHPSAVSISHHDERGAGFYAVGFARAGPGRGXXXXXXXXXXXXXXXXXXXVGSGALGMCAVVTSSGTAVANLLPAAAEADAAGLSMLLLTADRPPELRGCGSNQTIDQARCCMVNLLGSRARLSLDVQCPTDEVSAACLLSDIDHAVSRALGGGXXXGVPGPVHLNFMFRENLAPVEGAVRDAGVPGLSSAWSDRCLDSPRMARWEAGIEPFTTTAGGGGGLGRRGEGLQQVVDRLLCARRGILIVGSLIGPEERADVRHLAVTLRWPVYADVTSGLRCWSAEMGLGVGRLDQLLQDDAVKEAIAPDAVLQVGSPLTSKRVQKFISEPAATLTAPVSV 1249          
BLAST of mRNA_C-australica_Contig_10.1.1 vs. uniprot
Match: A0A7S0H9L0_9CRYP (Isochorismate synthase (Fragment) n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0H9L0_9CRYP)

HSP 1 Score: 460 bits (1183), Expect = 5.820e-140
Identity = 276/623 (44.30%), Postives = 368/623 (59.07%), Query Frame = 1
Query:    1 VVVARTREYRFTTGLDPIDMLCRLEEQRGCLFCLMGTDGSAFVGCTPERLFRLKDGVIRSEALAGTRERGATPEADELLGRELMESEKVQLIKPSSLASLSLRPQSENAITALYLSEAFKGFGR-VTVSEPYISKQAHVQHICSLVLLFVSPVRDVKVSLETDADEARLLHALHPTPAVCGAPRKEAHMVIRECESFDRGLYAGPIGYIASNDCEFCVGIRSALICQSGRKLIAYAGCGIVPGSTPEGEWQETGLGAKLKTFALLF--PPRLDLKAEPTLNSLWGTLLVEELARQGVNHFCCCPGSRSTPLTVAAVKHPLASTIVHHDERGAGFYGLGYAKATNRPCAIITSSGTAVANLLPAVVEACHGAVPLLLLTADRPSELRDTGSNQTIDQVKMFGGYVKWFKDMASPSDQIPATALLSDIGYAVQQALGLRGNSLQPGPVHVNCMFRENLAPEAGPVRELSVEGS--TSDWAQPCLEKARMGQWVGSGRPLCSTLHQLGMEEQGVD-EVASLVFEAKRGILVVGGLASAAERAAVRHLAGLLGWPVMADVGSGLRSEEFTATLM-VKHYDQMLLEPLVTAGARPDMVLQLGSPLVSRRLVRFLHTTAIT-LCSYIQV 1845
            VV++R     F+T ++P+D+L +L+  +G LFCL  T GSAF+GC+PE LF++   +I + A++GTR RG + E DE L REL+ SEK                + EN +T  Y+ E        V  S+ Y+ K  HVQHIC  +     P       +E       LL  L+PTPAVCG  R  A   IR  E FDRG + GP+G+++S+ CEF V IRS L C+  + L  YAG GIVPGS P+ EW+ET    K++    LF  PPR  L + P +N LW  L VEEL R GV  FC CPGSRSTPL VA   +P A+ +V HDER AGFY +GYA+A+ +P A + +SGTAVANLLPA VEA    +P+LLLTADRP ELRD GSNQTI+Q  +FG YV+W +D+  PSDQIPA  LLSD+ YAV +A     +S   GPVH+N  FRENLAP+ GPVR+ +  G+  +S W++ C+    + +W  S  P   T+         V  EV   +  ++RG++VVG L SA + A V  +A  L WPV  D  SG R +     +  V   DQML    ++   RPD +LQ G  LVS+R+   + ++  +  CSY+ V
Sbjct:  323 VVLSRNFFVEFSTEVEPMDLLLKLKSHQGYLFCLQPTAGSAFLGCSPEPLFKISHDIIETMAISGTRPRGQSTEQDEELARELLASEK---------------DKYENGVTTRYIQEQLANVAEDVETSDIYVMKLRHVQHICRKIR--AKPSSKAATPIE-------LLLTLNPTPAVCGESRPVATRFIRSVEGFDRGFFGGPVGFVSSSVCEFLVAIRSVL-CKP-KMLHVYAGAGIVPGSDPKSEWEETAF--KMRNILQLFANPPR-PLSSLPNINMLWAVLTVEELCRCGVTVFCLCPGSRSTPLAVAVSWNPKATAVVMHDERSAGFYCVGYARASKKPAACLVTSGTAVANLLPAAVEASQQGLPMLLLTADRPFELRDNGSNQTIEQAGIFGRYVRWSRDICCPSDQIPANVLLSDVDYAVHRA-----SSSPRGPVHLNFQFRENLAPDGGPVRD-NPPGNPISSTWSKGCISTLSIAKWEHSALP--HTVFPSSSSHLEVPAEVLCAMARSRRGLVVVGNLFSAEDSATVSWIAAELCWPVWNDAQSGGRWDFGPFGVRGVSMLDQMLCNDKLSGALRPDFILQFGEKLVSKRIATLISSSCYSDRCSYVVV 908          
BLAST of mRNA_C-australica_Contig_10.1.1 vs. uniprot
Match: A0A7S3Q7H0_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3Q7H0_9STRA)

HSP 1 Score: 394 bits (1013), Expect = 2.570e-113
Identity = 265/659 (40.21%), Postives = 368/659 (55.84%), Query Frame = 1
Query:    1 VVVARTREYRFTTGLDPIDMLCRLE---EQRGCLFCLM-GTDGSAFVGCTPERLFRLK--DGVIRSEALAGTRERGATPEADELLGRELMESEKVQLIKPSSLASLSLRPQSENAITALYLSEAFKGF---GRVTVSEP-----------YISKQAHVQHICSLVLLFVSPVRDVKVSLETDADEARLLHALHPTPAVCGAPRKEAHMVIRECES--FDRGLYAGPIGYIASNDCEFCVGIRSALICQSGR-----------KLIAYAGCGIVPGSTPEGEWQETG--LGAKLKTFALLFPPRLDLKAEPTLNSLWGTLLVEELARQGVNHFCCCPGSRSTPLTVAAVKHPLASTI------VHHDERGAGFYGLGYAKATNRPCAIITSSGTAVANLLPAVVEACHGAVPLLLLTADRPSELRDTGSNQTIDQVKMFG-GYVKWFKDMASPSDQIPATALLSDIGYAVQQALGLRGNSLQPGPVHVNCMFRENLAPEAGPVRELSVEGSTSDWAQP-CLEKARMGQWVGSGRPLCSTLHQLGME-EQGVDEVASLVFEAKRGILVVGGLAS----------AAERAAVRHLAGLLGWPVMADVGSGLRSEEFTATLMVKHYDQMLLEPLVTAGARPDMVLQLGSPLVSRRLVRFLHTT 1815
            VV+AR  +  F T +  +D++ +L+      G LF +  G  G+ F+GC+PERLF+++  DG++ SEALAGTR RG T EAD  L R+LM S+K                +SE  IT  ++ EAF+     G + +S+            ++ +  H+QHIC      ++    +      +A    LL  LHPTPAVCG P KE+   IR+ ES  FDRG+YAGP+G+I S+  +  V IRSAL+                +L  YAG GIVPGST +GEW ETG  LG    TF+      L LK+  T N  W T  VEEL R GV  F  CPGSRSTP+T AA+   + S I        HDERGA F  LGYA+AT RP A++TSSGTAVANL PAV+EA    VPLLL+TADRP E RDTG+NQ +DQ+K+F   YV+WF+D++ PSD IP +  LSD  +AV  A  LRG      PVH+N  FRENLAP+AGP+R  +  GS +D++    ++ A   +W   G          G   E  + ++ASL+  +++GI+VVG L S           +  A +   A  +G+P+ A  G+   +  F ++ +V + + +L    + +  RPD+++Q+GS LVS  +   +  T
Sbjct:  447 VVLARRGDLHFATEVKGLDVMMKLKFGGRVDGHLFYMKPGRLGNEFLGCSPERLFQVRGDDGIVMSEALAGTRPRGRTSEADAELLRDLMRSDK---------------DKSEIIITGEFIREAFEVLQQRGMLELSDANARENETDGTFFVRRLRHLQHICQSFEARMTKKGSI------NAVAQYLLEKLHPTPAVCGVPFKESIEFIRDYESVSFDRGMYAGPLGFIGSDRTDIVVAIRSALLTNGVSSKNILRNNVVSRLSVYAGAGIVPGSTVQGEWSETGYKLGVLSSTFS---QSPLTLKSFQTPNEAWATSFVEELIRSGVTQFYICPGSRSTPMT-AALARAMRSNIGLIDCTSTHDERGAAFRALGYARATKRPAAVVTSSGTAVANLYPAVMEAGLDGVPLLLITADRPYENRDTGANQAVDQIKVFSESYVRWFRDISPPSDDIPVSLALSDANHAVSVARELRG------PVHLNVQFRENLAPDAGPIRGDNRNGSHADFSPSRFIDVAGFQRWSTHGNKWSKLYSPSGSNVENAMYDIASLIARSRKGIIVVGNLRSDGVEGGSSDKPSTAAIISDFAESIGFPIFA--GAQSANLRFYSSAVVPYAEHLLKNSQLKSEVRPDLIIQIGSHLVSTEVQGIISAT 1072          
BLAST of mRNA_C-australica_Contig_10.1.1 vs. uniprot
Match: A0A2K1K2R2_PHYPA (Isochorismate synthase n=3 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1K2R2_PHYPA)

HSP 1 Score: 393 bits (1010), Expect = 5.090e-113
Identity = 258/661 (39.03%), Postives = 353/661 (53.40%), Query Frame = 1
Query:    1 VVVARTREYRFTTGLDPIDMLCRLE--EQRGCLFCLMGTDGSAFVGCTPERLFRLKDGVIRSEALAGTRERGATPEADELLGRELMESEKVQLIKPSSLASLSLRPQSENAITALYLSEAFKGFGRVTVSEPYISKQAHVQHICSLVLLFVSPVRDVKVSLETDADEARLLHALHPTPAVCGAPRKEAHMVIRECESFDRGLYAGPIGYIASNDCEFCVGIRSALI-------------CQSGRKLIAYAGCGIVPGSTPEGEWQETGLGAKLKTFALLFPPRLDLKAEPTLNSLWGTLLVEELARQGVNHFCCCPGSRSTPLTVAAVKHPLASTIVHHDERGAGFYGLGYAKATNRPCAIITSSGTAVANLLPAVVEACHGAVPLLLLTADRPSELRDTGSNQTIDQVKMFGGYVKWFKDMASPSDQIPATALLSDIGYAVQQALGLRGNSLQPGPVHVNCMFRENLAPEAGPVRELSVEGSTSDWAQPCLEKARMGQWVGSGRPLCSTLHQLGMEEQGVDEVASLVFE---AKRGILVVGGLASAAERAAVRHLAGLLGWPVMADVGSGLR--------SEEFTATLMVKHYDQMLLEPLVTAGARPDMVLQLGSPLVSRRLVRFLHTTAITLCSYIQVQHILPVMHALKA--SHSATY 1899
            VV+AR  + + +  +DP+ +L  L+  +     F +  ++GS+F+G TPERLF  +  ++ SEA+A TR RG T   D   G +L+ S K    +   +   S+R   E     + +            S   I KQA VQH+    L           +L ++ DE  L+  LHPTPAVCG P+  A   I   ESFDRG+YAGP+G+      EF VGIRS+LI                G  +  YAG G+V  S P  EWQE  L  K+  F  L  P   LK    +N+LW  L+VEE  R G+ +FC  PGSRS+PL  AA  + L +     DER   F+ +GY +  N+P A+ITSSGTAV+NLLPAVVEA    +PLLLLTADRP ELRDT +NQTIDQV  FGG+V++F D+    D+IPA  +L+ +  AV      R  ++  GPVH+NC FRE LA            G T  W+  CL+   + +W+ S  P   T +   + + G  ++  +V E   AKRG+LVVGGL +A E  AV  LA  LGWPV  DV SGLR             +  +++H DQ+LL+  V     PD++LQ+G  L S+R+  FL  +  T  +YI V+      H ++A  SH  T+
Sbjct:  391 VVMARRTKLQLSDDVDPLTILALLQAKDPSAYQFSIQLSEGSSFIGSTPERLFARRGLLVASEAVAATRSRGYTSSIDLDTGLDLILSSKDH--EEFEIVRESIRQNLEKVCKEVEVE-----------SHKSIIKQARVQHLYGRFL----------GTLHSEVDEFDLIRVLHPTPAVCGHPQAPAREAITASESFDRGMYAGPVGWFGGMGSEFAVGIRSSLIESKSNHTNNGANIVHKGANIFLYAGVGVVKDSDPSSEWQELEL--KVSQFESLLQPSRALKDVVNINALWAKLIVEECCRLGITYFCIAPGSRSSPLAAAAAANSLVTCTSCIDERSLAFHAVGYGRGANKPAAVITSSGTAVSNLLPAVVEASQDHIPLLLLTADRPHELRDTSANQTIDQVNHFGGFVRYFFDLPPADDKIPARMVLTTLDSAV-----FRAKTVPSGPVHINCPFREPLA------------GLTDPWSTACLKG--LDRWILSSSPF--TTYMNSVNQTGTRDILEIVHEMKGAKRGLLVVGGLHTAEETWAVAMLASHLGWPVFPDVLSGLRIGHVFHSGKANKLSLNIIQHIDQILLKKSVADVIEPDVILQIGGRLTSKRVGTFLGAS--TPRAYILVEE-----HPIRADPSHVVTH 998          
BLAST of mRNA_C-australica_Contig_10.1.1 vs. uniprot
Match: A0A096P8S9_OSTTA (Isochorismate synthase n=2 Tax=Ostreococcus tauri TaxID=70448 RepID=A0A096P8S9_OSTTA)

HSP 1 Score: 380 bits (975), Expect = 1.990e-108
Identity = 248/622 (39.87%), Postives = 331/622 (53.22%), Query Frame = 1
Query:    1 VVVARTREYRFTTGLDPIDMLCRLE--EQRGCLFCLMGTDGSAFVGCTPERLFRLKDGVIRSEALAGTRERGATPEADELLGRELMESEKVQLIKPSSLASLSLRPQSENAITALYLSEAFKGFGRVTVS---------EPYISKQAHVQHICSLVLLFVSPVRDVKVSLETDADEARLLHALHPTPAVCGAPRKEAHMVIRECESFDRGLYAGPIGYIASNDCEFCVGIRSALICQSGRKLIAYAGCGIVPGSTPEGEWQETGLGAKLKTFALLFPPRLDLKAEPTLNSLWGTLLVEELARQGVNHFCCCPGSRSTPLTVAAVKHPLASTIVHHDERGAGFYGLGYAKATNRPCAIITSSGTAVANLLPAVVEACHGAVPLLLLTADRPSELRDTGSNQTIDQVKMFGGYVKWFKDMASPSDQIPATALLSDIGYAVQQALGLRGNSLQPGPVHVNCMFRENLAPEAGPVRELSVEGSTSDWAQPCLEKARMGQWVGSGRPLCSTLHQLGMEEQGV--DEVASLVFEAKRGILVVGGLASAAERAAVRHLAGLLGWPVMADVGSGLR--SEEFTATLMVKHYDQMLLEPLVTAGARPDMVLQLGSPLVSRRLVRFLHTTAI 1821
            VV+AR  +   +  ++  D++ RL+  +     F L   +G  F+G TPERLF  + G   SEA+AGTR RG+    D  L  +++ S K                  E+   A+   E  +  G V            E  I +   VQH+ S +             L    +EA L+ ALHPTPAVCG PR  A   +R  ESFDRGLY+GP+G+I + D EF V IRSAL+  SG ++  YAG G+V  +  + EW E  L  K K    L  P   L + P  N+ W T+LV EL R G+  FC  PGSRSTPL +AA KH  A+ +V  DER  GFY LGYAK + +P A+I SSGTAVANLLP+VVEA   + PLLLLTADRP ELR+TG+NQTIDQVK+FG Y ++  D+A P D  PA A  +    A++    LRG  +  GPVH+NC FRE L P+              +W      K  +  W  S          +   + G       S +  AKRG+ VVGG  +AA+  A   +A  LGW V AD  SG+R  + E  +  M+   D +L+EP      RPD+++Q+G+ L S+RL +FL T+AI
Sbjct:  445 VVLARRSKLALSAPVNTFDLISRLQARDPDAYQFVLRHPNGETFLGSTPERLFLSQGGRASSEAVAGTRARGSDDGEDAALAYDMLLSPK------------------EHEEFAIVREEVRRALGEVAEGGNDGIDVELEKGILRNVTVQHLYSRL----------SAPLAGGKNEADLICALHPTPAVCGYPRPAALRTLRAVESFDRGLYSGPLGWIGAEDAEFAVAIRSALVHPSGDEVSLYAGVGVVGSANAQAEWSELNL--KTKPLESLLAPAPRLASLPNPNAAWATILVGELVRGGITTFCVAPGSRSTPLALAAEKHVGANVVVCIDERSLGFYALGYAKGSGQPAAVICSSGTAVANLLPSVVEASESSTPLLLLTADRPYELRNTGANQTIDQVKIFGSYTRFNADLAPPGDGSPARACATMASTALRH---LRG--VDSGPVHLNCAFREPLGPQR------------VEWDSVTALKG-LENWEASSTQFTIGNASISAPQDGSAWQSALSRISRAKRGLFVVGGGTTAADAIAATAMAETLGWAVAADATSGMRVGACENASVRMIPMIDYVLVEPSTHEVLRPDVIVQVGTRLTSKRLNQFLETSAI 1018          
BLAST of mRNA_C-australica_Contig_10.1.1 vs. uniprot
Match: A0A835Z971_9STRA (ADC synthase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z971_9STRA)

HSP 1 Score: 349 bits (896), Expect = 7.510e-107
Identity = 217/489 (44.38%), Postives = 272/489 (55.62%), Query Frame = 1
Query:  316 SENAITALYLSEAFKGFGR--VTVSEPYISKQAHVQHICSLVLLFVSPVRDVKVSLETDADEAR---------------LLHALHPTPAVCGAPRKEAHMVIRECESFDRGLYAGPIGYIASNDCEFCVGIRSALICQS----------GRKLIAYAGCGIVPGSTPEGEWQETGLGAKLKTFALLFP-------PRLDLKAEPTLNSLWGTLLVEELARQGVNHFCCCPGSRSTPLT-VAAVKHPLAST------IVHHDERGAGFYGLGYAKATN-RPCAIITSSGTAVANLLPAVVEACHGAVPLLLLTADRPSELRDTGSNQTIDQVKMF----GGYVKWFKDMASPSDQIPATALLSDIGYAVQQALG-----LRGNSLQPGPVHVNCMFRENLAPEAGPVRELSVEGSTSDWAQPCLEKARMGQWVGSGRPLCSTLHQL-GMEEQGVDEVASLVFEAKRGILVVGGLASAAERAAVRHLAGLL 1626
            SEN ITA ++  A        V+VS P++++Q HVQHI   +                                     LL ALHPTPAVCG P   AH VIR CE FDRG YAGP+GY+++   +  V IRSAL+  S          G +L  +AG GIV GST EGEW ETG   K+K    LF            L+  P +N+L G L  EELAR GV     CPGSRSTPLT  AA + P A+       +VHHDERGA F+ LGYAK +  RPCA++T+SGTAVANLLP  +EA  G   +LLLTADRP E RD G++QT+DQV ++        +WF+D+A P D + A ALLSD+ +AV +A G             GPVH+N MFRENLAPE G +R+    G  SDW+  CL+  +  +W+    PL  TL    G    GV +V  L+  A+RG++VVG L SA ERAA R LA LL
Sbjct:    2 SENDITAAHVRAALAACALRDVSVSAPHLARQPHVQHIRRSITARAPXXXXXXXXXXXXXXXXXXXXXXXXXXAALIPALLRALHPTPAVCGCPTAAAHDVIRACEPFDRGFYAGPVGYLSARASDVGVAIRSALLGGSVSSSGSSGGGGTRLTLFAGAGIVAGSTAEGEWGETGPSMKMKGMLSLFARAPAPAASAAALRRLPNVNALAGALAAEELARCGVRACVLCPGSRSTPLTHAAAPRAPSAAXXXXAMPLVHHDERGAAFFALGYAKGSGGRPCAVVTTSGTAVANLLPGAMEAGLGGHAMLLLTADRPPEARDVGADQTLDQVCLYVHLLRNCARWFRDVAPPDDAVSACALLSDVSHAVSRASGSSXXXXXXXXXDAGPVHLNLMFRENLAPEGGAIRDAQCSGLASDWSPRCLDTPQFARWLAGDAPLAVTLAVTPGGNGGGVGDVVELLLGARRGVVVVGALYSARERAAARRLALLL 490          
BLAST of mRNA_C-australica_Contig_10.1.1 vs. uniprot
Match: A0A1Z5JQW7_FISSO (Isochorismate synthase n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JQW7_FISSO)

HSP 1 Score: 374 bits (961), Expect = 1.290e-106
Identity = 258/688 (37.50%), Postives = 362/688 (52.62%), Query Frame = 1
Query:    1 VVVARTREYRFTTGLDPIDMLCRLEEQRGC--LFCLMGTD-------------GSAFVGCTPERLFRLKDGVIRSEALAGTRERGATPEADELLGRELMESEKVQLIKPSSLASLSLRPQSENAITALYLSEAFK----GFGRVTVSEPYISKQAHVQHICSLVLLFVSPVRDVKVSLETDADEARLLHALHPTPAVCGAPRKEAHMVIRECESFDRGLYAGPIGYIASNDCEFCVGIRSALICQSGRKLIAYAGCGIVPGSTPEGEWQETGLGAKLKTFALLFPPRLDLKAEPTLNSLWGTLLVEELARQGVNHFCCCPGSRSTPLTVAAV----KHPLASTIVHHDERGAGFYGLGYAKATNRPCAIITSSGTAVANLLPAVVEACHGAVPLLLLTADRPSELRDTGSNQTIDQVKMFGGYVKWFKDMASPSDQIPATALLSDIGYAVQQALGLRGNSLQPGPVHVNCMFRENLAPEAGPVRELSVEGSTSDWAQPCLEKARMGQWVGSGRPLCSTLHQLGMEEQGVDEVASLVFE----AKRGILVVGGLASAAERAA---VRHLAGLLGWPVMADVGSGLRSEEFTATLMVKHYDQMLLEPLVTAGARPDMVLQLGSPLVSRRLVRFLHTTAITLCSYIQVQHILPVMHALK-------ASHSATYPELYIWNDR*LLALLPAP 1953
            VV+AR +  +F      +D+L R +++ G   LF +   D              S FVGCTPE+LFR+ +  + +EALAGTR RG+ P+ D  L +EL+ S       P  L         ENA TA Y+ E         G    S+ ++ +  H+QHIC     + +PV +      T      LL  LHPTPAVCG P   A   IR  E F R  YAGPIGY++S + +  VGIRSA++ +  ++L+  AG G+V  ST   E+ ET   AK +  A  F   L L++ P +N+ W T +VEE  R GV+    CPGSRSTPL VA      +HP    I  HDER A F  +GY KA+ RP  ++TSSGTAVANLLPAV+EA     P++LLTADRPSE RD  +NQ +DQVK+FG  V WF+D+  PSD++   A LSD  +A   AL       Q  PVH+N  FRENLAPE GPVR    +   S  A    +     +W GSG+PL   + +     Q  D  A+ + +    ++RG+LVVG +  + +      +  LA  +G+P++A   S LR   FT+  +V   + +L  P V    +PD +LQ+G+PL+S  +  +L  TA         QH++   +A +        +HS + P +  + +  +L     P
Sbjct:  191 VVLARQQLLQFKHPFHVVDLLQRWKQESGTGNLFAMALWDEKDDNTIITSTRSSSCFVGCTPEQLFRIHNSTVTTEALAGTRPRGSHPQEDADLLQELVNS-------PKDL--------DENACTARYIEEVLSKQEPSIGPFVTSQTFVRRTRHLQHICRT---YQAPVWN-----NTSTLIRNLLEQLHPTPAVCGLPLNMASDYIRRVEPFSRDYYAGPIGYLSSTESQLLVGIRSAVL-RPKQELLLTAGSGLVLNSTLREEFAETV--AKFQVVASWFSSPLSLQSCPNINTAWATAVVEEFVRCGVDMVFVCPGSRSTPLAVAWAWARRQHPFLRVISCHDERAAAFRAVGYGKASGRPAVVVTSSGTAVANLLPAVLEAHQDDAPMILLTADRPSEHRDISANQAMDQVKLFGDKVAWFRDILPPSDEVNVVAALSDANFAHNMALE------QQQPVHINVQFRENLAPEGGPVRGGDGDAVESYNATRFTQGPAFARWSGSGQPL---IQRHSSSTQNNDVAAANLVQWLRNSRRGLLVVGQIPPSQQDEVYPLLDQLAQTIGFPILA-TSSSLR---FTSHAVVWFAEHLLSCPNVREAVQPDFILQVGAPLLSTTITSYLKQTA---------QHVILQTNARRRIDPEYSVTHSISTPNMAYFLESLILRTSELP 830          
BLAST of mRNA_C-australica_Contig_10.1.1 vs. uniprot
Match: A0A2P6V409_9CHLO (Chloroplastic isoform X2 n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6V409_9CHLO)

HSP 1 Score: 371 bits (953), Expect = 1.690e-105
Identity = 264/711 (37.13%), Postives = 347/711 (48.80%), Query Frame = 1
Query:    1 VVVARTREYRFTTGLDPIDMLCRLEEQ--RGCLFCLMGTDGSAFVGCTPERLFRLKDGVIRSEALAGTRERGA--TPEADELLGRELMESEKVQLIKPSSLASLSLRPQSENAITALYLSEAFKGFG---RVTVSEPYISKQAHVQHICSLVLLFVSPVRDVKVSLETDADEARLLHALHPTPAVCGAPRKEAHMVIRECESFDRGLYAGPIGYIASNDCEFCVGIRSALICQSGRKLIA-----------------------------------------------------------------YAGCGIVPGSTPEGEWQETGLGAKLKTFALLFPPRLDLKAEPTLNSLWGTLLVEELARQGVNHFCCCPGSRSTPLTVAAVKHPLASTIVHHDERGAGFYGLGYAKATNRPCAIITSSGTAVANLLPAVVEACHGAVPLLLLTADRPSELRDTGSNQTIDQVKMFGGYVKWFKDMASPSDQIPATALLSDIGYAVQQALGLRGNSLQPGPVHVNCMFRENLAP-----------------EAGPVRELSVEGSTSDW----AQPCLEKAR---MGQWVGSGRPLCSTLHQLGMEEQGVDEVASLVFEAKRGILVVGGLASAAERAAVRHLAGLLGWPVMADVGSGLRS------------EEFTATLMVKHYDQMLL-EPLVTAGARPDMVLQLGSPLVSRRLVRFL 1806
            VV+AR  +   T  LDP+ +L  L E+  R     L    G+ FVG TPE L+      + SEA+AGTR RGA    E D  L  +L+ S+K  +               E  +   ++++A  G     +V V++  + KQ  VQH+             +   L+  A +A LL ALHPTPAVCG PR++A  ++   E FDRG YAGP G+I     EF V IRSAL+   G    A                                                                 +AG GIV GS    EW E  L  K++ +  L      L A P +NSLW  L+VEEL R G N FC  PGSR +PLTVA  +HP A  +V  DER  GFY LG+ +AT RP  +ITSSGTAVANLLPA VEA    VPLLL+T DRP+ELRD+G+NQTIDQVKMFGG+ +W  D+ +P D +PA  +LS +G AVQ+A+G+       GPVH+NC FRE LAP                 EAG     +V G  +      A P L++     +G    S     + L  LG+ +        +V  A+RG++V   L+   +  A   L+ LLGWPV ADV SGLR+                A  ++ H+DQ+LL +       RPD+VLQLG  L S+RL +FL
Sbjct:  352 VVLARRTDVSITGRLDPLSLLEALGERDPRAYQIMLQMPSGACFVGSTPECLYTRTGTAVASEAVAGTRARGAGGDVERDFWLAFDLLRSQKDHV---------------EFTVVRDWVAQALAGVCEAVQVDVAKSVL-KQGAVQHLYG----------KLSAQLKPGASDAALLAALHPTPAVCGRPRQDALELLAGSEPFDRGFYAGPFGWIGQEAAEFVVAIRSALVQPQGAARAALPPGTAETAAAQXXXXXXXXXXAERRASHAAAGPGPAXXXXXXXXXXXXXXXXAPLAADGTLVSLFAGVGIVRGSETASEWAELDL--KVRQYERLLQSPTPLAAAPNVNSLWARLMVEELCRLGCNTFCIAPGSRCSPLTVAVAQHPRARVVVCIDERSLGFYALGHGRATGRPAVVITSSGTAVANLLPAAVEAAQSGVPLLLVTGDRPAELRDSGANQTIDQVKMFGGFTRWHADLPAPLDAVPARTILSAVGTAVQRAVGVPA-----GPVHLNCQFREPLAPVETGAWDRRCLQGLARWEAGDAPFTAVAGLQAAGGAAAAAPLLQQLPALPLGGAASSPSGGSADLAALGLADPAARAALQVVLGARRGLIVAAELSHPEDSVAAAQLSQLLGWPVAADVLSGLRAGVPAAPAASTAXXXXGAAAVIHHFDQLLLLDRAQWEALRPDVVLQLGGHLTSKRLNQFL 1029          
BLAST of mRNA_C-australica_Contig_10.1.1 vs. uniprot
Match: A0A7S4R202_9DINO (Hypothetical protein n=1 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A7S4R202_9DINO)

HSP 1 Score: 370 bits (950), Expect = 3.150e-105
Identity = 253/646 (39.16%), Postives = 337/646 (52.17%), Query Frame = 1
Query:    1 VVVARTREYRFTTGLDPIDMLCRL---EEQRGCLFCLMGTDGSAFVGCTPERLFRLKDGVIRSEALAGTRERGATPEADELLGRELMESEKVQLIKPSSLASLSLRPQSENAITALYLSEAFKGFGR-VTVSEPYISKQAHVQHICS---LVLLFVSPVRDVKVSLETDADEARLLHA-------------------LHPTPAVCGAPRKEAHMVIRECESFDRGLYAGPIGYIASNDCEFCVGIRSALICQSGRKLIAYAGCGIVPGSTPEGEWQETGLGAKLKTFALLFPPRLD-----------LKAEPTLNSLWGTLLVEELARQGVNHFCCCPGSRSTPLTVAAVKHPLASTIVHHDERGAGFYGLGYAKATNRPCAIITSSGTAVANLLPAVVEACHGAVPLLLLTADRPSELRDTGSNQTIDQVKMFGGYVKWFKDMASPSDQIPATALLSDIGYAVQQALGLRGNSLQPGPVHVNCMFRENLAPEAGPVRELSVEGSTSDWAQPCLEKARMGQWVGSGRPL-CSTLHQLGMEE-QGVDEVASLVFEAKRGILVVGGLASAAERAAVRHLAGLLGWPVMADVGSGLRSEEFTATLMVKHYDQMLLEPLVTAGA-RPDMVLQLGSPLVSRRLVRFLHTTA 1818
            VV+AR         +DP+ +L ++     +R  LF L    G+AFV  TPERL R+    + +EA+AGT                    E+ +    + L + S++  SE+ +   Y+     G  + + V + +I +  H+ HI      +     PV D+  +    A    L+ A                   + PTPAVCG P  EA   I E E +DRG YA P G ++S   E  V +RSAL+ + GR L AYAG GIVPGS P  E++E  L  KL+ F    P  L            L+  P LN+LW  L+ EE  R GV +F  CPGSRSTPL VA  +HP A + ++HDER A FY LG+AKA   P A+I +SGTAVANLLP VVEA    VPLLLLTADRPSELRDTG+NQTI Q  +FG Y +W KD   PS Q PA ALLSD+  AV  A G + +S  PGPVH+N  FRENLAP+AGPVR       TS W    ++   M +W  SG+P  C       +E    V+E+ ++     R ++VVG L +A E      +A  L   V AD+ SG+R        +V + DQ+L  PL+     + D V++LG  + S RL  F+   A
Sbjct:  322 VVLARRVLLELARRVDPVSLLRQVLGSAYKRHYLFVLEPESGAAFVSLTPERLCRVHGADVWTEAVAGT-----------------WPIEEFEKTGEAELLASSVKRNSEHQLVVDYICGLLDGVSKHIKVCDTHILRLKHLVHIKQSYHAIAKDPQPVADLDGTGAASASPPDLVQAEQPSAASVPFAVSTFFCRSMSPTPAVCGLPLTEARRFIHEAEPWDRGFYAAPCGVVSSRGSELIVALRSALL-RDGRSLFAYAGAGIVPGSDPADEFEEISL--KLRQFTEGIPRALQGMETPAAHLQHLREMPNLNTLWAHLVTEECVRSGVRNFVICPGSRSTPLVVAVARHPHAHSAINHDERAAAFYALGWAKAVEAPVAVIVTSGTAVANLLPGVVEAAQAQVPLLLLTADRPSELRDTGANQTITQPGIFGVYTRWAKDFECPSVQFPAHALLSDVDLAVAAAGG-QLSSRHPGPVHLNFCFRENLAPDAGPVR--GSPALTSAWDDSYVDTPEMYRWTTSGQPWSCYAPATPDVEGCSAVEELVAIASGCSRVLVVVGTLRTADEVVLAEDIALRLRAAVFADITSGMRQRPS----VVNYADQLLNSPLLAGDLLQVDAVVRLGGAVCSARLNAFVKAAA 940          
The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_10.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A4D9D2W1_9STRA4.610e-15046.60MR_MLE domain-containing protein n=6 Tax=Monodopsi... [more]
D8LMF2_ECTSI5.660e-14844.33Similar to Isochorismate Synthase n=1 Tax=Ectocarp... [more]
A0A7S0H9L0_9CRYP5.820e-14044.30Isochorismate synthase (Fragment) n=1 Tax=Hanusia ... [more]
A0A7S3Q7H0_9STRA2.570e-11340.21Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
A0A2K1K2R2_PHYPA5.090e-11339.03Isochorismate synthase n=3 Tax=Physcomitrium paten... [more]
A0A096P8S9_OSTTA1.990e-10839.87Isochorismate synthase n=2 Tax=Ostreococcus tauri ... [more]
A0A835Z971_9STRA7.510e-10744.38ADC synthase n=1 Tax=Tribonema minus TaxID=303371 ... [more]
A0A1Z5JQW7_FISSO1.290e-10637.50Isochorismate synthase n=1 Tax=Fistulifera solaris... [more]
A0A2P6V409_9CHLO1.690e-10537.13Chloroplastic isoform X2 n=1 Tax=Micractinium cond... [more]
A0A7S4R202_9DINO3.150e-10539.16Hypothetical protein n=1 Tax=Alexandrium monilatum... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-australica_Contig_10contigC-australica_Contig_10:141..6312 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Chrysoparadoxa australica CS_1217 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LMF2
PFAMsAbhydrolase_1,Abhydrolase_6,Chorismate_bind,Hexokinase_2,MR_MLE_C,TPP_enzyme_C,TPP_enzyme_M_2,TPP_enzyme_N
Model size2800
Max annot lvl2759|Eukaryota
KEGG rclassRC00588,RC01053,RC02148,RC02186,RC02475
KEGG koko:K02552,ko:K14759
KEGG ReactionR01717,R04031,R08165,R08166
KEGG Pathwayko00130,ko01053,ko01100,ko01110,ko01130,map00130,map01053,map01100,map01110,map01130
KEGG ModuleM00116
Hectar predicted targeting categoryother localisation
Exons22
Evalue1.12e-147
EggNOG OGsCOG0147@1|root,COG0596@1|root,KOG1223@2759|Eukaryota,KOG2382@2759|Eukaryota
EC2.2.1.9,4.2.1.113,4.2.99.20,5.4.4.2
Descriptionhydrolase activity, acting on ester bonds
Cds size1872
COG categoryC
BRITEko00000,ko00001,ko00002,ko01000
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-australica_Contig_10.1.1prot_C-australica_Contig_10.1.1Chrysoparadoxa australica CS_1217polypeptideC-australica_Contig_10 1429..6255 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682586730.0552433-UTR-C-australica_Contig_10:140..3251682586730.0552433-UTR-C-australica_Contig_10:140..325Chrysoparadoxa australica CS_1217UTRC-australica_Contig_10 141..325 -
1682586730.0670183-UTR-C-australica_Contig_10:444..5721682586730.0670183-UTR-C-australica_Contig_10:444..572Chrysoparadoxa australica CS_1217UTRC-australica_Contig_10 445..572 -
1682586730.0760374-UTR-C-australica_Contig_10:697..8521682586730.0760374-UTR-C-australica_Contig_10:697..852Chrysoparadoxa australica CS_1217UTRC-australica_Contig_10 698..852 -
1682586730.0872037-UTR-C-australica_Contig_10:1025..14281682586730.0872037-UTR-C-australica_Contig_10:1025..1428Chrysoparadoxa australica CS_1217UTRC-australica_Contig_10 1026..1428 -
1682586730.3230622-UTR-C-australica_Contig_10:6255..63121682586730.3230622-UTR-C-australica_Contig_10:6255..6312Chrysoparadoxa australica CS_1217UTRC-australica_Contig_10 6256..6312 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682586730.1031194-CDS-C-australica_Contig_10:1428..14291682586730.1031194-CDS-C-australica_Contig_10:1428..1429Chrysoparadoxa australica CS_1217CDSC-australica_Contig_10 1429..1429 -
1682586730.113542-CDS-C-australica_Contig_10:1563..17361682586730.113542-CDS-C-australica_Contig_10:1563..1736Chrysoparadoxa australica CS_1217CDSC-australica_Contig_10 1564..1736 -
1682586730.1233146-CDS-C-australica_Contig_10:1976..20451682586730.1233146-CDS-C-australica_Contig_10:1976..2045Chrysoparadoxa australica CS_1217CDSC-australica_Contig_10 1977..2045 -
1682586730.133585-CDS-C-australica_Contig_10:2175..22661682586730.133585-CDS-C-australica_Contig_10:2175..2266Chrysoparadoxa australica CS_1217CDSC-australica_Contig_10 2176..2266 -
1682586730.1441407-CDS-C-australica_Contig_10:2455..25261682586730.1441407-CDS-C-australica_Contig_10:2455..2526Chrysoparadoxa australica CS_1217CDSC-australica_Contig_10 2456..2526 -
1682586730.1793551-CDS-C-australica_Contig_10:2689..28271682586730.1793551-CDS-C-australica_Contig_10:2689..2827Chrysoparadoxa australica CS_1217CDSC-australica_Contig_10 2690..2827 -
1682586730.1906211-CDS-C-australica_Contig_10:3082..32291682586730.1906211-CDS-C-australica_Contig_10:3082..3229Chrysoparadoxa australica CS_1217CDSC-australica_Contig_10 3083..3229 -
1682586730.2069056-CDS-C-australica_Contig_10:3325..33971682586730.2069056-CDS-C-australica_Contig_10:3325..3397Chrysoparadoxa australica CS_1217CDSC-australica_Contig_10 3326..3397 -
1682586730.2186315-CDS-C-australica_Contig_10:3633..37001682586730.2186315-CDS-C-australica_Contig_10:3633..3700Chrysoparadoxa australica CS_1217CDSC-australica_Contig_10 3634..3700 -
1682586730.2276485-CDS-C-australica_Contig_10:3814..39321682586730.2276485-CDS-C-australica_Contig_10:3814..3932Chrysoparadoxa australica CS_1217CDSC-australica_Contig_10 3815..3932 -
1682586730.2394345-CDS-C-australica_Contig_10:4091..41621682586730.2394345-CDS-C-australica_Contig_10:4091..4162Chrysoparadoxa australica CS_1217CDSC-australica_Contig_10 4092..4162 -
1682586730.2496247-CDS-C-australica_Contig_10:4453..46261682586730.2496247-CDS-C-australica_Contig_10:4453..4626Chrysoparadoxa australica CS_1217CDSC-australica_Contig_10 4454..4626 -
1682586730.264322-CDS-C-australica_Contig_10:4902..50231682586730.264322-CDS-C-australica_Contig_10:4902..5023Chrysoparadoxa australica CS_1217CDSC-australica_Contig_10 4903..5023 -
1682586730.2724473-CDS-C-australica_Contig_10:5114..51671682586730.2724473-CDS-C-australica_Contig_10:5114..5167Chrysoparadoxa australica CS_1217CDSC-australica_Contig_10 5115..5167 -
1682586730.2805204-CDS-C-australica_Contig_10:5303..54391682586730.2805204-CDS-C-australica_Contig_10:5303..5439Chrysoparadoxa australica CS_1217CDSC-australica_Contig_10 5304..5439 -
1682586730.288624-CDS-C-australica_Contig_10:5550..56631682586730.288624-CDS-C-australica_Contig_10:5550..5663Chrysoparadoxa australica CS_1217CDSC-australica_Contig_10 5551..5663 -
1682586730.2965543-CDS-C-australica_Contig_10:5728..58371682586730.2965543-CDS-C-australica_Contig_10:5728..5837Chrysoparadoxa australica CS_1217CDSC-australica_Contig_10 5729..5837 -
1682586730.3044567-CDS-C-australica_Contig_10:6007..61451682586730.3044567-CDS-C-australica_Contig_10:6007..6145Chrysoparadoxa australica CS_1217CDSC-australica_Contig_10 6008..6145 -
1682586730.3134844-CDS-C-australica_Contig_10:6244..62551682586730.3134844-CDS-C-australica_Contig_10:6244..6255Chrysoparadoxa australica CS_1217CDSC-australica_Contig_10 6245..6255 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-australica_Contig_10.1.1

>prot_C-australica_Contig_10.1.1 ID=prot_C-australica_Contig_10.1.1|Name=mRNA_C-australica_Contig_10.1.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=624bp
MLCRLEEQRGCLFCLMGTDGSAFVGCTPERLFRLKDGVIRSEALAGTRER
GATPEADELLGRELMESEKVQLIKPSSLASLSLRPQSENAITALYLSEAF
KGFGRVTVSEPYISKQAHVQHICSLVLLFVSPVRDVKVSLETDADEARLL
HALHPTPAVCGAPRKEAHMVIRECESFDRGLYAGPIGYIASNDCEFCVGI
RSALICQSGRKLIAYAGCGIVPGSTPEGEWQETGLGAKLKTFALLFPPRL
DLKAEPTLNSLWGTLLVEELARQGVNHFCCCPGSRSTPLTVAAVKHPLAS
TIVHHDERGAGFYGLGYAKATNRPCAIITSSGTAVANLLPAVVEACHGAV
PLLLLTADRPSELRDTGSNQTIDQVKMFGGYVKWFKDMASPSDQIPATAL
LSDIGYAVQQALGLRGNSLQPGPVHVNCMFRENLAPEAGPVRELSVEGST
SDWAQPCLEKARMGQWVGSGRPLCSTLHQLGMEEQGVDEVASLVFEAKRG
ILVVGGLASAAERAAVRHLAGLLGWPVMADVGSGLRSEEFTATLMVKHYD
QMLLEPLVTAGARPDMVLQLGSPLVSRRLVRFLHTTAITLCSYIQVQHIL
PVMHALKASHSATYPELYIWNDR*
back to top

mRNA from alignment at C-australica_Contig_10:141..6312-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-australica_Contig_10.1.1 ID=mRNA_C-australica_Contig_10.1.1|Name=mRNA_C-australica_Contig_10.1.1|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=6172bp|location=Sequence derived from alignment at C-australica_Contig_10:141..6312- (Chrysoparadoxa australica CS_1217)
GTGGTTGTGGCACGTACCAGGGAGTACAGGTTTACAACCGGTCTTGACCC GATAGATATGCTCTGCAGGTCTGCCTTGGGGTGTTATCGCTTACTCGCCA CAGTCTCACAGTCTCACAGTGCGGGCTTTACACATCTTCCTGACTCCCGA CTCCTGCTTATCCCCAGGCTTGAAGAGCAACGCGGCTGTCTCTTCTGTCT CATGGGCACTGACGGCAGTGCCTTTGTTGGCTGCACGCCTGAGAGACTAT TTAGATTGAAGGATGGGGTTATTAGGAGCGAGGCACTGGCTGGGACTAGA GAAAGGTCAATTGGCAAGACACTATACTTCTTGATTCATGTTTTTTGCTA AAGGGATGAAGATCCCAGCTCAATCTACCACACTAGGCTCAGCCTTAGCT TTAACCCTAGTCCAGCTCCTGATGACTCCTCAGCCACTGTTTATTGTTAC TGATGCACTAGCTCTCATTTGTCAGGGGTGCTACACCTGAGGCAGATGAG CTGCTTGGGAGAGAGCTTATGGAGAGTGAGAAGGTGCAATTAATAAAACC ATCATCCCTTGCAAGCCTCAGCTTACGTCCTCAAGTGGTAAAGCGAAGCT TGTGAATTGAATTACTGGCTTGTCACACACTCACTTTCCTCAGGACAAGA GCGAGAATGCCATCACAGCTCTGTATCTCTCTGAAGCGTTCAAGGGCTTT GGGCGTGTCACAGTGTCTGAGCCTTACATCTCCAAACAGGCGCACGTGCA ACATATCTGCAGGTTAGTTGCTGTTAAAAGTACATGAGTCCACTGTAGCC ACTTGCGCTACTCTTGTGACCGACTGATAAGACCTAGTAGCGTAATGTTA TTGAAGGTTCTTGTGGGTGCTAGCTTAGTTCTTCTCTTCGTCTCTCCTGT TAGGGACGTAAAGGTATCGCTGGAGACCGATGCAGATGAAGCCCGTTTAC TGCACGCCCTCCATCCAACACCAGCTGTGTGTGGAGCGCCAAGAAAAGAA GCTCATATGGTAAAAGCATCGTCGAATCCCCTTTAACTCGTGTTGCATCC TCCGCAGCCAAAGCCTGTTGCTTGGTATGCTGTGCTTGTGACACTTGCAC ATGACAGTCTCTCTCTCCCTCTCTCTTGTTGTAATCAATTCATAGGTGAT TCGTGAGTGTGAGAGCTTTGACAGAGGCTTATATGCTGGTCCAATTGGGT AGGTCACCTGGCCCCACTACATCACACACCATTTCACACGATATGATAGC TATTCTTACCAAGGCTCACTCTTCCCTGCCTTGCCTCAGCTACATTGCCA GTAATGACTGTGAGTTTTGTGTGGGCATCCGCTCAGCTTTAATCTGCCAG AGTGGGCGCAAGCTCATCGCTTATGCTGGCTGTGGTATAGTACCAGGATC TACGCCAGAGGTGGGATTGTGGGAGGGAAAGGAGTGACAATGCTACTCAA CCGTCTATCTGCCTCTTCACTTGCCATCTCTTGTTTGCCCATACGTTAGC TAGTTCATTCAGTTTTCACTCAGGCCTCGTTCAGTTCTCGTACCGTGACA GAGCAGAAAGTTTAAGCTGCCAGCCTTGCGTGTCACCACATTGATGAGTG AGAACTCCTAGACAAAAACTGATCAGTACTTCACTGATGTACGTTACCTC TCTCATCTGCACCTTTTCTCCTATGCGCAAACACAGGGCGAATGGCAGGA GACTGGCTTAGGGGCCAAACTCAAGACGTTTGCACTGCTATTTCCTCCAC GCCTTGATCTCAAGGCTGAGCCAACCCTCAACAGCCTGTGGGGGACCCTG CTAGTCGAAGAGCTTGCTCGGCAAGGTGTTAATCATTTCTGCTGCTGTCC AGGGTCCAGGTGAGAGCCACAGAGGTGTTAGATGTCTGCGTGAGTGGGGG TGATGAATGACACTGCACACGGCACCTACCTCATAGCCTTGCCATCACTG CTTGCCCTTCATGCTGGAAGTATAGTCGACCAAATCCTGGCCAGAGAAGT GCAATCACCTATCCCAGCCTTGCATAGCAGAGTCACCCTCGTCACAATGG CTAAGACTAGACCATCTTTCTTGTGTGAACTATCATGCCATCCAAAGTCA TATTTGCTTTTATCTTACTGACCTTCTCCTTCTTCCACTCCATGGCTAAG ATCTACGCCCCTCACTGTGGCTGCTGTCAAGCACCCTCTTGCCAGCACTA TTGTGCATCACGACGAGAGAGGTTTGACCCGTACAACTTTAATCACACTG CAGCTAATACTACTGCCTCATGCCATGTCTCCTCACCTGCTCACCTAACG CTTCCACTGACAGACAGTCCCATGCTAGCCTGACTCTTAACATATACTGA GATGCTTCCTTCCCTGGCTGGTGGAATCAGGTGCAGGTTTCTATGGTTTA GGCTATGCCAAGGCTACCAACCGCCCTTGTGCCATTATCACCAGCTCTGG CACTGCTGTTGCTAACTTGCTGCCCGCTGTTGTGGAAGCTTGCCATGGGT ATGTGCAGCGCAAGCTCTGTCTACCTCTGTGTCAGCTTGGTGCTTGGTGC TTGGTGCTTGGTGCTACCTGCCTTGTACCTTCAAGCCCTTATCTGCATGA TTTGCTCTTTAGGGCTGTGCCGCTGCTCCTGCTGACAGCGGATCGACCCT CAGAGCTTCGAGATACGGGCAGCAATCAGGTAGTAGAATAGGAGCAAGTA GCAGCTAGTAGCATCTGCAGCAGTAGCTCATGTGATGCGTGTGCTTCCAT GCAATGCTCATCTTGCGCTTACTTACTGCCCGCTTCATGTGTGCTTCATA TATGTTGGTGTGCTGATCTTGCTTAAATACGTACCTGCCACCATGTATCC CACTGGGTGTAATAAGTATGGCGATGGATCACCTATGACTCATCCACCAT CTACTTTGCGATCAGACTATTGACCAAGTCAAGATGTTTGGTGGCTATGT GAAGTGGTTCAAGGACATGGCAAGCCCAAGTGATCAGGTGGGTGATCCTA TTGCCTAGGGTGGTGGTGATACGCCATGCAATGCCATCCATGTCATTCCA TGCAACTCACATTACAACTTCCCACTGTACCAGATCCCTGCCACTGCACT CTTAAGTGACATTGGGTATGCAGTCCAGCAGGCCCTGGGGTTGCGGGGCA ACTCTCTCCAACCAGGCCCGGTTCACGTCAACTGCATGTTCAGGGAGAAC TTAGCCCCAGAAGCCGGGCCTGTTCGAGAGGTAGGCCCTTCACACTTTCT GTTGCACGAGCATGAATATGGCCACAATTTGCCCATCCACCCCAGCCCCT CACTACCCATCACTTTCTCATTTGCTGTTGCTTCCTCAGCATTACCGGCC ACTTCCAGCTCACTTACCACAACTCAAATGGCTTAACTTTATTTTGCCTT TTGAGTTACATGGGGTCCATGCACACACGTCTTAATTACGCCATCTTCCC TCCCATTTAACCTCTAAATCATGCATCAGGCTGAGCTGAGTGTAGAGGGC TCCACCAGTGATTGGGCGCAGCCATGCCTGGAGAAGGCCCGCATGGGACA GTGGGTTGGGAGTGGCAGGCCTCTATGCTCTACACTTCACCAGCTTGGGA TGGAGGAGCAGGGTGTGGATGAGGTAGCCATAGCCTCTTAGTCTTTTTGC AGTTCTATCCACGTTTCTATCAACAGCTTCATCAGTAGTCTCGTAGTAGT AATTGGCGCAGTGTATTGGGAGTGGCGCTCCGCTGCTTCTGGTTGATAGC TCTCTTTTTCTCATACCATGCTGTGTTTCACTGCAGGTTGCTAGTTTGGT ATTTGAGGCCAAGAGAGGGATACTTGTGGTTGGTGGACTTGCCAGCGCTG CAGAAAGGTGAGTAAAATTAGCACAGCTCCGTCTCATCTGCAACAGAAAC ACCTCAGTGGGTTTGCCTCACAAATGACTAAAGAGCCCCGTTGCTTCCTG TTACAAGCACTGCATAGGATTTAGTGCGTTGGGATGTCGACTATGCAGTA GCATATAGCCTGACCTCTGTTTTATTCTGACCTTGCTTGCTGCCAGGGCT GCTGTGAGGCATTTGGCTGGTCTGCTTGGGTGGCCAGTTATGGCTGATGT AGGGTCAGGTCTGAGATCAGAAGAATTTACCGCAACGGTAAGATGCATTA GGCCACTTCATAGGCTACCTTACACTTCCGTTCTTATCATCCGTTCAATC AACCTAACCGCCACACTTTTTTGGTTTCTTTACCATGCAGGGTGAAAGGA TCAAGGGCACAAATCAGCTGATGGTGAAGCATTATGACCAGATGCTCCTT GAACCTTTAGTTACTGCAGGTGCTAGGCCTGATATGGTCAGTGCTCACTG CTCACAGCTCAGCAATCACTTCAAACGCTCTAAGAATTGCGCTGGCGCTC CATCTTCATCTTTGCTTCATTGCAAAATCAATCCTTTGTTTCCTTGAGGT TGGATATGGATATGGATGTGGACGTGGATTCATTCGTTTCTGAGCTCACT CCTATGCTGGCTCATGCATGCTCTCGTCCCTTCTCTTTCCTTTTGTTTGC TTTCGTTTGCTCTTGCTCATCCCTAGGTTTTGCAACTGGGTTCCCCTCTG GTCTCAAGGCGCTTGGTGCGGTTCCTGCACACCACGGCCATTACCCTCTG CTCCTACATACAGGTACAGCACATACTGCCAGTCATGCATGCCCTCAAAG CCAGTCATTCAGCCACTTATCCAGAGCTCTATATTTGGAACGACAGGTAG TCAATGGGGGTGCAAGGCATGATCCTAGCGCCTCTGCAACTCACGTGGTA AGTGAAGCTGTAGAGAGTGCAAGTTGATGAAAGGGTAAAGTGAGTGAGTG AGCCCAAGGCATGTGGAATACTGAGTGAAGGAGGCTTCTCGCGCTGCTGC CCGCACCTTTTCACCTGCTCACTGTCAGTATCTTCGGAAGCTGCTCTGAC TGTTTATTTCAATTCAGGTGTGCGGTGAGATTCGCTCGTTTGCATCTCGC TTGGCAGCAACGCTTGGCAGACCAATTGGCACCAACAGGAAGCGTGCTGG CAATGACTTAAAGGTCAACCTGCGTATGGTTACAGACATTGCTTGTGAGC CTCCTCTCTGCTTACGTGACTGTCAGCACGCTCTGTGGAATGATCTACTG ATCACTCCTTATCCTTCTAGGGATGCCTGCCTGTTCTCTCTGATGTGGCA GCTGCAGTGCTCGAGGAAGCGGTTGCCCCAAGTTTAAACGAGCTCACTGA GCCGCTCATAGCTCATCTGGTACAGAGGCATCTTAGTGTGCACTTTGCCC TTCCCTGACCCTAAGCCAGAGCCTGGTCCTTGATTAGCTGTGCCTCAATC CCGACACCTAAAGAACATGAAACCAGTTTTACCCGCTAGGTGTACCATAT TCCCTTCCGCTGCAGTATTGCTGACATGGGAGCCACTGCTATGCTTCCCA GGTATCCAAGTCCCTGCCAGAGCGTGCAGGATTGCTACTATCAAACAGCA TGCCTTGCCGAGACATGGACTGCTTTGGATCTGTCAGAACCTCCTCTCAG AGGAGGAGGAACCTAGCCAAGGTTGCCATCAATAGAGGAGCTAGTGGCAT TGATGGAATTGTCAGGTAGGCTTGCCTTCGCTTTGGCGTGCTGACCTAGC TTGACTTAGCTTGGCCTGAACTACCCTTACCCCTGCTGTAGCTGTGCTGT AAAAGCACTAAACTAACCTAACCTTTACCCCATACCGCAGCTCTGCCATT GGCTATGCTGTTGGTTTGGGTGAGCCAGTCACAGCACTAATTGGCGACCT TGCAGGGTTGCATGACCTTAACGCACTGCATCTGCTGAGACTGGTAAGAC TATTTATTGCATTGATGGGTCAACATCGTGCGGCTTACTCATCCTCCCTC TCCGTCGCCATCGAAAGCCCCCTCTGTGCTCCCCGCAGCCCTCACTTGCC ACCCCTGATATTTTTATTTTATATTCCCAGGTGGAAGTTCCCATCACTCT TGTGTGCGTGAACAACGGAGGTGGAGGCATCTTTAGCTTCCTTCCAATAG CCAAGCATACCAGTGTCTTCACGCCTTACTTCACGACGCCACATGACCTG AGCTTCAAGGGAGCGTGTGAAATGTTTGGAGTTCACTATGCTGTGGCAAC CAGGTGCGAGGGGTTGCGCACG
back to top

Coding sequence (CDS) from alignment at C-australica_Contig_10:141..6312-

>mRNA_C-australica_Contig_10.1.1 ID=mRNA_C-australica_Contig_10.1.1|Name=mRNA_C-australica_Contig_10.1.1|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=1872bp|location=Sequence derived from alignment at C-australica_Contig_10:141..6312- (Chrysoparadoxa australica CS_1217)
ATGCTCTGCAGGCTTGAAGAGCAACGCGGCTGTCTCTTCTGTCTCATGGG
CACTGACGGCAGTGCCTTTGTTGGCTGCACGCCTGAGAGACTATTTAGAT
TGAAGGATGGGGTTATTAGGAGCGAGGCACTGGCTGGGACTAGAGAAAGG
GGTGCTACACCTGAGGCAGATGAGCTGCTTGGGAGAGAGCTTATGGAGAG
TGAGAAGGTGCAATTAATAAAACCATCATCCCTTGCAAGCCTCAGCTTAC
GTCCTCAAAGCGAGAATGCCATCACAGCTCTGTATCTCTCTGAAGCGTTC
AAGGGCTTTGGGCGTGTCACAGTGTCTGAGCCTTACATCTCCAAACAGGC
GCACGTGCAACATATCTGCAGCTTAGTTCTTCTCTTCGTCTCTCCTGTTA
GGGACGTAAAGGTATCGCTGGAGACCGATGCAGATGAAGCCCGTTTACTG
CACGCCCTCCATCCAACACCAGCTGTGTGTGGAGCGCCAAGAAAAGAAGC
TCATATGGTGATTCGTGAGTGTGAGAGCTTTGACAGAGGCTTATATGCTG
GTCCAATTGGCTACATTGCCAGTAATGACTGTGAGTTTTGTGTGGGCATC
CGCTCAGCTTTAATCTGCCAGAGTGGGCGCAAGCTCATCGCTTATGCTGG
CTGTGGTATAGTACCAGGATCTACGCCAGAGGGCGAATGGCAGGAGACTG
GCTTAGGGGCCAAACTCAAGACGTTTGCACTGCTATTTCCTCCACGCCTT
GATCTCAAGGCTGAGCCAACCCTCAACAGCCTGTGGGGGACCCTGCTAGT
CGAAGAGCTTGCTCGGCAAGGTGTTAATCATTTCTGCTGCTGTCCAGGGT
CCAGATCTACGCCCCTCACTGTGGCTGCTGTCAAGCACCCTCTTGCCAGC
ACTATTGTGCATCACGACGAGAGAGGTGCAGGTTTCTATGGTTTAGGCTA
TGCCAAGGCTACCAACCGCCCTTGTGCCATTATCACCAGCTCTGGCACTG
CTGTTGCTAACTTGCTGCCCGCTGTTGTGGAAGCTTGCCATGGGGCTGTG
CCGCTGCTCCTGCTGACAGCGGATCGACCCTCAGAGCTTCGAGATACGGG
CAGCAATCAGACTATTGACCAAGTCAAGATGTTTGGTGGCTATGTGAAGT
GGTTCAAGGACATGGCAAGCCCAAGTGATCAGATCCCTGCCACTGCACTC
TTAAGTGACATTGGGTATGCAGTCCAGCAGGCCCTGGGGTTGCGGGGCAA
CTCTCTCCAACCAGGCCCGGTTCACGTCAACTGCATGTTCAGGGAGAACT
TAGCCCCAGAAGCCGGGCCTGTTCGAGAGCTGAGTGTAGAGGGCTCCACC
AGTGATTGGGCGCAGCCATGCCTGGAGAAGGCCCGCATGGGACAGTGGGT
TGGGAGTGGCAGGCCTCTATGCTCTACACTTCACCAGCTTGGGATGGAGG
AGCAGGGTGTGGATGAGGTTGCTAGTTTGGTATTTGAGGCCAAGAGAGGG
ATACTTGTGGTTGGTGGACTTGCCAGCGCTGCAGAAAGGGCTGCTGTGAG
GCATTTGGCTGGTCTGCTTGGGTGGCCAGTTATGGCTGATGTAGGGTCAG
GTCTGAGATCAGAAGAATTTACCGCAACGCTGATGGTGAAGCATTATGAC
CAGATGCTCCTTGAACCTTTAGTTACTGCAGGTGCTAGGCCTGATATGGT
TTTGCAACTGGGTTCCCCTCTGGTCTCAAGGCGCTTGGTGCGGTTCCTGC
ACACCACGGCCATTACCCTCTGCTCCTACATACAGGTACAGCACATACTG
CCAGTCATGCATGCCCTCAAAGCCAGTCATTCAGCCACTTATCCAGAGCT
CTATATTTGGAACGACAGGTAG
back to top