mRNA_C-tenellus_contig10743.1.1 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig10743.1.1 vs. uniprot
Match: D8LTF0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTF0_ECTSI) HSP 1 Score: 81.3 bits (199), Expect = 6.160e-12 Identity = 55/125 (44.00%), Postives = 70/125 (56.00%), Query Frame = 1 Query: 322 TCKFKGSINQDMQIKAKFSEDGRYVISGSEDGQVYIWRACAESDHRSKSSKSXXXXXXXXRVGGGSVG------------------TQVVSIKSRSSQSFNVQCLKSPKLATAASFVPDAALEAA 642 T KFKG +N +QIKA FS DG +V+SGSEDGQVY+W + ++S S XXXXX T +KSR+S SF+VQC P++ATAA+F+P AALEAA Sbjct: 634 TSKFKGLVNDGIQIKASFSTDGMFVVSGSEDGQVYLWNSKQRRQRTARSVPSCNGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATTPATLVKSRTSSSFDVQCATLPQVATAAAFLPTAALEAA 758
BLAST of mRNA_C-tenellus_contig10743.1.1 vs. uniprot
Match: A0A8H7UPR4_9FUNG (Uncharacterized protein n=1 Tax=Umbelopsis vinacea TaxID=44442 RepID=A0A8H7UPR4_9FUNG) HSP 1 Score: 67.4 bits (163), Expect = 7.000e-8 Identity = 29/54 (53.70%), Postives = 37/54 (68.52%), Query Frame = 1 Query: 316 KQTCKFKGSINQDMQIKAKFSEDGRYVISGSEDGQVYIWRACAESDHRSKSSKS 477 K C FKGS+N MQI A FS+DG+YV+ GSED +VYIW+ AE H+ + S Sbjct: 309 KSICNFKGSVNTKMQISASFSDDGKYVVCGSEDRRVYIWKTMAEFYHQESTDDS 362
BLAST of mRNA_C-tenellus_contig10743.1.1 vs. uniprot
Match: W7U9T0_9STRA (Wd repeat protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U9T0_9STRA) HSP 1 Score: 65.1 bits (157), Expect = 4.520e-7 Identity = 27/37 (72.97%), Postives = 32/37 (86.49%), Query Frame = 1 Query: 325 CKFKGSINQDMQIKAKFSEDGRYVISGSEDGQVYIWR 435 CK+KG N MQIKA FSEDG+YVISGSE+GQ+YIW+ Sbjct: 435 CKYKGLTNDHMQIKASFSEDGKYVISGSENGQIYIWK 471
BLAST of mRNA_C-tenellus_contig10743.1.1 vs. uniprot
Match: A0A067CPS7_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CPS7_SAPPC) HSP 1 Score: 63.2 bits (152), Expect = 1.680e-6 Identity = 32/67 (47.76%), Postives = 42/67 (62.69%), Query Frame = 1 Query: 262 QFFIFTKSCSGSCMFSV--LKQTCKFKGSINQDMQIKAKFSEDGRYVISGSEDGQVYIWRACAESDH 456 +FF+ T + S +FSV + CK+KG N+ +QIK +FS+DG YVI GSE G VYIW S H Sbjct: 395 KFFLVTTNDSRMRLFSVDNYARVCKYKGLRNEYLQIKGRFSQDGDYVICGSETGNVYIWHKANASAH 461
BLAST of mRNA_C-tenellus_contig10743.1.1 vs. uniprot
Match: K3WSW5_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WSW5_GLOUD) HSP 1 Score: 62.4 bits (150), Expect = 2.330e-6 Identity = 28/66 (42.42%), Postives = 43/66 (65.15%), Query Frame = 1 Query: 262 QFFIFTKSCSGSCMFSV--LKQTCKFKGSINQDMQIKAKFSEDGRYVISGSEDGQVYIWRACAESD 453 ++F+ + + S +FSV + CK+KG +N +QIK +FS+DG YVI GSE+G VY+W + D Sbjct: 305 KYFMVSTNDSRMRLFSVDNYSRICKYKGLVNDHLQIKGRFSQDGDYVICGSENGSVYVWNKACKHD 370
BLAST of mRNA_C-tenellus_contig10743.1.1 vs. uniprot
Match: F0X2D3_9STRA (Uncharacterized protein AlNc14C982G12685 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0X2D3_9STRA) HSP 1 Score: 58.5 bits (140), Expect = 2.780e-6 Identity = 27/57 (47.37%), Postives = 39/57 (68.42%), Query Frame = 1 Query: 268 FIFTKSCSGSCMFSV--LKQTCKFKGSINQDMQIKAKFSEDGRYVISGSEDGQVYIW 432 F+ + + S +FSV + CK+KG +N +QIK +FS+DG YVI GSE+G VY+W Sbjct: 67 FLVSTNDSRMRLFSVDNYSRVCKYKGLLNDHLQIKGRFSQDGDYVICGSENGNVYMW 123
BLAST of mRNA_C-tenellus_contig10743.1.1 vs. uniprot
Match: A0A6A5A9B2_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A5A9B2_9STRA) HSP 1 Score: 59.3 bits (142), Expect = 3.510e-6 Identity = 28/63 (44.44%), Postives = 41/63 (65.08%), Query Frame = 1 Query: 262 QFFIFTKSCSGSCMFSV--LKQTCKFKGSINQDMQIKAKFSEDGRYVISGSEDGQVYIWRACA 444 ++F+ + + S +FSV + CK+KG +N +QIK +FS+DG YVI GSE+ VYIW A Sbjct: 48 KYFLVSTNDSRMRLFSVDNYSRVCKYKGLVNNYLQIKGRFSQDGDYVICGSENAHVYIWNKSA 110
BLAST of mRNA_C-tenellus_contig10743.1.1 vs. uniprot
Match: A0A1X0SDA8_RHIZD (WD40 repeat-like protein n=4 Tax=Rhizopus TaxID=4842 RepID=A0A1X0SDA8_RHIZD) HSP 1 Score: 62.0 bits (149), Expect = 4.320e-6 Identity = 24/35 (68.57%), Postives = 32/35 (91.43%), Query Frame = 1 Query: 328 KFKGSINQDMQIKAKFSEDGRYVISGSEDGQVYIW 432 K+KG +N MQI+AKFS+DGRY++SGSEDG+VY+W Sbjct: 411 KYKGLVNTTMQIRAKFSDDGRYIVSGSEDGRVYLW 445
BLAST of mRNA_C-tenellus_contig10743.1.1 vs. uniprot
Match: A0A7I8K5F3_SPIIN (Hypothetical protein n=2 Tax=Spirodela intermedia TaxID=51605 RepID=A0A7I8K5F3_SPIIN) HSP 1 Score: 61.6 bits (148), Expect = 6.180e-6 Identity = 30/58 (51.72%), Postives = 36/58 (62.07%), Query Frame = 1 Query: 304 FSVLKQTCKFKGSINQDMQIKAKFSEDGRYVISGSEDGQVYIWRACAESDHRSKSSKS 477 FSV+ CKFKG N QI A F+ DGRYV+SGSED VY+W E D R ++S Sbjct: 536 FSVV---CKFKGLRNSGSQISASFTADGRYVVSGSEDSNVYVWNCGEEEDRRPTRARS 590
BLAST of mRNA_C-tenellus_contig10743.1.1 vs. uniprot
Match: A0A6G0XJW7_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XJW7_9STRA) HSP 1 Score: 61.2 bits (147), Expect = 6.590e-6 Identity = 30/65 (46.15%), Postives = 43/65 (66.15%), Query Frame = 1 Query: 262 QFFIFTKSCSGSCMFSV--LKQTCKFKGSINQDMQIKAKFSEDGRYVISGSEDGQVYIWRACAES 450 ++F+ + + S +FSV + CK+KG +N +QIK +FS+DG YVI GSE+ QVYIW A S Sbjct: 387 KYFLVSTNDSRMRLFSVDNYSRVCKYKGLVNNYLQIKGRFSQDGDYVICGSENAQVYIWTKSAIS 451 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig10743.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig10743.1.1 >prot_C-tenellus_contig10743.1.1 ID=prot_C-tenellus_contig10743.1.1|Name=mRNA_C-tenellus_contig10743.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=321bp MLQFFIFTKSCSGSCMFSVLKQTCKFKGSINQDMQIKAKFSEDGRYVISGback to top mRNA from alignment at C-tenellus_contig10743:1238..5386- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig10743.1.1 ID=mRNA_C-tenellus_contig10743.1.1|Name=mRNA_C-tenellus_contig10743.1.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=4149bp|location=Sequence derived from alignment at C-tenellus_contig10743:1238..5386- (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig10743:1238..5386- >mRNA_C-tenellus_contig10743.1.1 ID=mRNA_C-tenellus_contig10743.1.1|Name=mRNA_C-tenellus_contig10743.1.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=963bp|location=Sequence derived from alignment at C-tenellus_contig10743:1238..5386- (Choristocarpus tenellus KU2346)back to top |