mRNA_C-tenellus_contig1056.1.2 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig1056.1.2 vs. uniprot
Match: A0A6H5KZR8_9PHAE (Ubiquitinyl hydrolase 1 n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KZR8_9PHAE) HSP 1 Score: 131 bits (330), Expect = 1.860e-30 Identity = 66/112 (58.93%), Postives = 80/112 (71.43%), Query Frame = 3 Query: 249 SEADQAKQVENNKIVAQTNAISDEIASSQPLIGTKESLSVLLPEYQGNPKPGFTKGVEDLCRRYSSLRRVRGDGNCFYRCFLFSLLEGTLAGLKREGDGGDRAKVELERLKQ 584 S D AKQ N + V Q NAI+ I ++QP +G KE + LLPEY+GNPKPGF KGV+DL +RYS+LRRVRGDGNCFYR FLF LE L G+K GD +A +EL RL+Q Sbjct: 28 SSVDLAKQ--NEQTVEQQNAINATIKATQPKVGAKEEVDALLPEYEGNPKPGFRKGVQDLGKRYSALRRVRGDGNCFYRSFLFGYLERLLQGIKGVGDANTKAMLELSRLRQ 137
BLAST of mRNA_C-tenellus_contig1056.1.2 vs. uniprot
Match: A0A7S3XV58_HETAK (Ubiquitinyl hydrolase 1 (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XV58_HETAK) HSP 1 Score: 95.9 bits (237), Expect = 2.740e-19 Identity = 53/102 (51.96%), Postives = 70/102 (68.63%), Query Frame = 3 Query: 276 ENNKIVAQTNAISDEIASSQPLIGTKESLSVLLPEYQGNPKPGFTKGVEDLCRRY-SSLRRVRGDGNCFYRCFLFSLLEGTLAGLKREGDGGDRAKVELERL 578 ++++I+AQ N I D+IA+ QPLIG+K ++S L PEY+ NP P F +G++ L + Y LRRVRGDGNCFYR LF LLE + L R+G GG EL RL Sbjct: 75 QDDQILAQQNQIQDQIAAEQPLIGSKIAVSSLRPEYERNPSPAFVEGIDYLDKAYPGGLRRVRGDGNCFYRGLLFGLLEQLV--LHRDGWGG----AELARL 170
BLAST of mRNA_C-tenellus_contig1056.1.2 vs. uniprot
Match: W7TH65_9STRA (Ubiquitinyl hydrolase 1 n=4 Tax=Monodopsidaceae TaxID=425072 RepID=W7TH65_9STRA) HSP 1 Score: 97.1 bits (240), Expect = 2.350e-18 Identity = 52/110 (47.27%), Postives = 67/110 (60.91%), Query Frame = 3 Query: 291 VAQTNAISDEIASSQPLIGTKESLSVLLPEYQGNPKPGFTKGVEDLCRRYSSLRRVRGDGNCFYRCFLFSLLEGTLA--------GLKREGDGGDRAK----VELERLKQ 584 +AQ I +IA+SQPL+G E S+LL Y+ NP+ GF +GVEDL RRY+ +RR+R DGNCFYR FLF+ L G + G ++EG GG K E ER Q Sbjct: 42 IAQQEEIDSQIAASQPLVGPLEPPSMLLQAYKDNPEKGFVEGVEDLARRYARMRRIRRDGNCFYRAFLFAYLAGLVEEGIEDGRKGEEKEGGGGKGRKRGRKKEWERFSQ 151
BLAST of mRNA_C-tenellus_contig1056.1.2 vs. uniprot
Match: A0A7S2SU39_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SU39_9STRA) HSP 1 Score: 87.0 bits (214), Expect = 7.110e-16 Identity = 45/107 (42.06%), Postives = 60/107 (56.07%), Query Frame = 3 Query: 291 VAQTNAISDEIASSQPLIGTKESLSVLLPEYQGNPKPGFTKGVEDLCRRYSSLRRVRGDGNCFYRCFLFSLLEGTLAGLKREGDGGDRA-KVELERLKQGHIDFAGL 608 ++Q I +IA+ +G E + L EY GNP+PGF G+E L RYS+LRRVRGDGNCFYRCFLF LE + + +R K L+ +Q D + Sbjct: 33 MSQLGEIERDIAAKSLKVGVPEPVQGLAGEYAGNPRPGFLPGIEYLASRYSALRRVRGDGNCFYRCFLFGYLEQLIRQRDTAVEDAERERKRALQAARQSKDDLVSV 139
BLAST of mRNA_C-tenellus_contig1056.1.2 vs. uniprot
Match: A0A7S2SU36_9STRA (Ubiquitinyl hydrolase 1 n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SU36_9STRA) HSP 1 Score: 87.0 bits (214), Expect = 3.850e-15 Identity = 45/107 (42.06%), Postives = 60/107 (56.07%), Query Frame = 3 Query: 291 VAQTNAISDEIASSQPLIGTKESLSVLLPEYQGNPKPGFTKGVEDLCRRYSSLRRVRGDGNCFYRCFLFSLLEGTLAGLKREGDGGDRA-KVELERLKQGHIDFAGL 608 ++Q I +IA+ +G E + L EY GNP+PGF G+E L RYS+LRRVRGDGNCFYRCFLF LE + + +R K L+ +Q D + Sbjct: 1 MSQLGEIERDIAAKSLKVGVPEPVQGLAGEYAGNPRPGFLPGIEYLASRYSALRRVRGDGNCFYRCFLFGYLEQLIRQRDTAVEDAERERKRALQAARQSKDDLVSV 107
BLAST of mRNA_C-tenellus_contig1056.1.2 vs. uniprot
Match: A0A7S1SSY6_9CHLO (Ubiquitin thioesterase n=1 Tax=Tetraselmis chuii TaxID=63592 RepID=A0A7S1SSY6_9CHLO) HSP 1 Score: 79.7 bits (195), Expect = 1.050e-12 Identity = 47/116 (40.52%), Postives = 64/116 (55.17%), Query Frame = 3 Query: 246 SSEADQAKQVENNKIVAQTNAISDEIASSQPLIGTKESLSVLLPEYQGNPKPGFTKGVEDLCRRYSSLRRVRGDGNCFYRCFLFSLLEGTLAGLKREGDGGDRAKVELERLKQGHI 593 S++A + +Q + +I+ Q NAI A +PL+G KE L L EY G F K +E L RYS +RR RGDGNCFYR F+F LE L + + + +R L LK G + Sbjct: 5 SADAAEGQQPTDEQIIEQENAIRASEAEGRPLVGEKEPLQALKAEY-GAGSAVFVKKIESLMDRYSGIRRARGDGNCFYRSFVFGYLESLL--ISQNCEEKERMLKTLVSLKAGMV 117
BLAST of mRNA_C-tenellus_contig1056.1.2 vs. uniprot
Match: A0A077ZHC2_TRITR (Ubiquitinyl hydrolase 1 n=1 Tax=Trichuris trichiura TaxID=36087 RepID=A0A077ZHC2_TRITR) HSP 1 Score: 74.7 bits (182), Expect = 1.330e-12 Identity = 37/79 (46.84%), Postives = 49/79 (62.03%), Query Frame = 3 Query: 273 VENNKIVAQTNAISDEIASSQPLIGTKESLSVLLPEYQGNPKPGFTKGVEDLCRRYSSLRRVRGDGNCFYRCFLFSLLE 509 V +++I+AQ I +IA QPLIG K +S L+ EY P F +L ++Y+ +RRVRGDGNCFYR FSL E Sbjct: 15 VMDDQIMAQRQQIERDIAEKQPLIGEKLPISCLVAEYDAQQSPSFHNNALNLQKKYAYIRRVRGDGNCFYRAVAFSLCE 93
BLAST of mRNA_C-tenellus_contig1056.1.2 vs. uniprot
Match: A0A0V1MC20_9BILA (Ubiquitin thioesterase n=3 Tax=Trichinella TaxID=6333 RepID=A0A0V1MC20_9BILA) HSP 1 Score: 79.0 bits (193), Expect = 1.770e-12 Identity = 40/78 (51.28%), Postives = 52/78 (66.67%), Query Frame = 3 Query: 285 KIVAQTNAISDEIASSQPLIGTKESLSVLLPEYQGNPKPGFTKGVEDLCRRYSSLRRVRGDGNCFYRCFLFSLLEGTL 518 +I+AQ I +E+A+SQPLIG+KESL L+ EY + F + L +Y+SLRRVRGDGNCFYR F+L E L Sbjct: 34 QILAQQREIENEVAASQPLIGSKESLDRLIKEYSQDTTSRFYEKAIQLQNKYTSLRRVRGDGNCFYRAVAFNLCEKLL 111
BLAST of mRNA_C-tenellus_contig1056.1.2 vs. uniprot
Match: A0A0V1A943_9BILA (Ubiquitin thioesterase n=9 Tax=Trichinella TaxID=6333 RepID=A0A0V1A943_9BILA) HSP 1 Score: 76.3 bits (186), Expect = 1.410e-11 Identity = 39/78 (50.00%), Postives = 50/78 (64.10%), Query Frame = 3 Query: 285 KIVAQTNAISDEIASSQPLIGTKESLSVLLPEYQGNPKPGFTKGVEDLCRRYSSLRRVRGDGNCFYRCFLFSLLEGTL 518 +I+AQ I +E+A+SQPLIG KESL L+ EY + F + L +Y+ LRRVRGDGNCFYR F+L E L Sbjct: 33 QILAQQREIENEVAASQPLIGNKESLDRLVKEYSQDTASRFYEKAVQLQNKYTFLRRVRGDGNCFYRAVAFNLCEKLL 110
BLAST of mRNA_C-tenellus_contig1056.1.2 vs. uniprot
Match: UPI000B8CE8F3 (ubiquitin thioesterase otubain-like isoform X1 n=2 Tax=Carica papaya TaxID=3649 RepID=UPI000B8CE8F3) HSP 1 Score: 76.3 bits (186), Expect = 1.750e-11 Identity = 46/109 (42.20%), Postives = 61/109 (55.96%), Query Frame = 3 Query: 288 IVAQTNAISDEIASSQPLIGTKESLSVLLPEYQGNPKPGFTKGVEDLCRRYSSLRRVRGDGNCFYRCFLFSLLEGTLAGLKREGDGGDRAKVELERLKQ-----GHIDF 599 I+ Q +AI E A P +G KE LS L EYQ P + ++ L +YS++RR RGDGNCF+R F+FS LE L RE DR KV +E ++ G+ DF Sbjct: 34 IMQQQSAIRKEEAEKIPFVGDKEPLSSLAAEYQSG-SPILLEKIKVLSGQYSAIRRTRGDGNCFFRSFMFSYLEHILESQDREEV--DRIKVNIEECRKTLQSLGYADF 139 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig1056.1.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig1056.1.2 >prot_C-tenellus_contig1056.1.2 ID=prot_C-tenellus_contig1056.1.2|Name=mRNA_C-tenellus_contig1056.1.2|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=135bp MNGGERDNSSEADQAKQVENNKIVAQTNAISDEIASSQPLIGTKESLSVLback to top mRNA from alignment at C-tenellus_contig1056:65..5351- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig1056.1.2 ID=mRNA_C-tenellus_contig1056.1.2|Name=mRNA_C-tenellus_contig1056.1.2|organism=Choristocarpus tenellus KU2346|type=mRNA|length=5287bp|location=Sequence derived from alignment at C-tenellus_contig1056:65..5351- (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig1056:65..5351- >mRNA_C-tenellus_contig1056.1.2 ID=mRNA_C-tenellus_contig1056.1.2|Name=mRNA_C-tenellus_contig1056.1.2|organism=Choristocarpus tenellus KU2346|type=CDS|length=405bp|location=Sequence derived from alignment at C-tenellus_contig1056:65..5351- (Choristocarpus tenellus KU2346)back to top |