mRNA_C-tenellus_contig1055.1.1 (mRNA) Choristocarpus tenellus KU2346

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-tenellus_contig1055.1.1
Unique NamemRNA_C-tenellus_contig1055.1.1
TypemRNA
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Homology
BLAST of mRNA_C-tenellus_contig1055.1.1 vs. uniprot
Match: D8LJP2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LJP2_ECTSI)

HSP 1 Score: 332 bits (851), Expect = 1.820e-112
Identity = 174/235 (74.04%), Postives = 188/235 (80.00%), Query Frame = 1
Query:   79 GGVLAGGLHAVSGPDHLAALLPRIMGQHWHRSMRIGAVWGLGHGFSAMAIGLAAFLFKDRLGLGSNPAVVARMGTWTEGLVGVSLIAIGLLGLKESLLDYEGGEHATMHEERGVSMTATEGSAEEDRTLTTVEVIGKRGGQRAIFLNGVLHGFSWDGAPSLAPALALTTWRSVLWFLVAYCAGTMLAMSATTTVIGEGSVRVGQALDQPDIPRKLSVVSSFIAIAIGAVWLLKAI 783
            GGVLAGGLHAVSGPDHLAALLPRIMGQ WH+SMRIGA WGLGHGFSA  IGLAAF FKDRLGLG N  +VA MG+WTEGLVGVSLIAIGLLGLKESLLDYE        E +       EG              G    +RAIF NGVLHGFSWDGAPSLAPALAL++W SVLWFL+AYC+GTM+AMSATTT+IGEGSVRVG+ALDQPDIPRKLSVVSSF+AI IGAVWL KA+
Sbjct:    8 GGVLAGGLHAVSGPDHLAALLPRIMGQKWHKSMRIGATWGLGHGFSATVIGLAAFFFKDRLGLGHNKRLVAMMGSWTEGLVGVSLIAIGLLGLKESLLDYE---ETPAFEAKSAGSAVVEGXXXXXXXXXXXXXXG----ERAIFFNGVLHGFSWDGAPSLAPALALSSWGSVLWFLLAYCSGTMVAMSATTTLIGEGSVRVGKALDQPDIPRKLSVVSSFVAITIGAVWLAKAV 235          
BLAST of mRNA_C-tenellus_contig1055.1.1 vs. uniprot
Match: A0A835YVB1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVB1_9STRA)

HSP 1 Score: 296 bits (759), Expect = 1.390e-98
Identity = 163/240 (67.92%), Postives = 182/240 (75.83%), Query Frame = 1
Query:   73 VGGGVLAGGLHAVSGPDHLAALLPRIMGQHWHRSMRIGAVWGLGHGFSAMAIGLAAFLFKDRL--GLGSNPAVVARMGTWTEGLVGVSLIAIGLLGLKESLLD--YEGGEHATMHEERGVSMTATEGSAEEDRTLTTVEVIGKRGGQRAIFLNGVLHGFSWDGAPSLAPALALTTWRSVLWFLVAYCAGTMLAMSATTTVIGEGSVRVGQALDQPDIPRKLSVVSSFIAIAIGAVWLLKA 780
            +GGGVLAGGLHA+SGPDHLAALLPRIMG+ W  +MRIGAVWGLGHGFSA  IGLAAF  KDR+  G G     ++++GT+TE LVGVSLI IGL+GLKESLLD  +E    A   E  G    A  G                 GGQRAIFLNG+LHGFSWDGAPSLAPALA TTW  VLWFL+AYC GTM AMSA TT+IGEGSVRVGQAL+QPDIP++LSVVSS IAIAIGAVWL+KA
Sbjct:    1 MGGGVLAGGLHAISGPDHLAALLPRIMGKAWPVAMRIGAVWGLGHGFSATLIGLAAFFLKDRIQAGGGGGGRWISKLGTYTEVLVGVSLITIGLIGLKESLLDKPHEDDAAAAASEISGEKSPAKRG-----------------GGQRAIFLNGLLHGFSWDGAPSLAPALACTTWHGVLWFLLAYCGGTMAAMSAATTIIGEGSVRVGQALEQPDIPKRLSVVSSGIAIAIGAVWLVKA 223          
BLAST of mRNA_C-tenellus_contig1055.1.1 vs. uniprot
Match: A0A4D9DEM4_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DEM4_9STRA)

HSP 1 Score: 234 bits (596), Expect = 9.390e-74
Identity = 123/237 (51.90%), Postives = 170/237 (71.73%), Query Frame = 1
Query:   73 VGGGVLAGGLHAVSGPDHLAALLPRIMGQHWHRSMRIGAVWGLGHGFSAMAIGLAAFLFKDRLGLGSNPAVVARMGTWTEGLVGVSLIAIGLLGLKESLLDYEGGEHATMHEERGVSMTATEGSAEEDRTLTTVEVIGKRGGQRAIFLNGVLHGFSWDGAPSLAPALALTTWRSVLWFLVAYCAGTMLAMSATTTVIGEGSVRVGQALDQPDIPRKLSVVSSFIAIAIGAVWLLKAI 783
            + GG+LAG LHAV+GPDHLAALLPR +G+ W+++MRIGAVWGLGHG SA+ +G+ AF  K RL   S+  ++ ++  +TE L+GVSLI IGLLGLKE+   ++      +  E  ++ +A  G+A++  T       GK     A+FLNG+LHGFSWDG P+LAPALA  +W  V+ FL +Y  GTML+MS  T++IGEG+V+VGQALD+P+IP+KL+  SS +AI +G VW +KA+
Sbjct:   13 ISGGMLAGSLHAVTGPDHLAALLPRCIGKRWYQAMRIGAVWGLGHGISAIIMGMVAFFLKGRLSTYSHNTLIPKLSLYTEVLIGVSLIIIGLLGLKEAA-HFDVSAVMPLEAEGSIAGSAASGAAKKKAT-------GK-----AVFLNGLLHGFSWDGTPTLAPALAFDSWLPVMTFLCSYGLGTMLSMSTATSLIGEGTVKVGQALDKPNIPKKLAQGSSVVAILVGLVWTVKAL 236          
BLAST of mRNA_C-tenellus_contig1055.1.1 vs. uniprot
Match: W7TPT7_9STRA (Uncharacterized protein n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TPT7_9STRA)

HSP 1 Score: 233 bits (593), Expect = 1.200e-71
Identity = 122/237 (51.48%), Postives = 169/237 (71.31%), Query Frame = 1
Query:   73 VGGGVLAGGLHAVSGPDHLAALLPRIMGQHWHRSMRIGAVWGLGHGFSAMAIGLAAFLFKDRLGLGSNPAVVARMGTWTEGLVGVSLIAIGLLGLKESLLDYEGGEHATMHEERGVSMTATEGSAEEDRTLTTVEVIGKRGGQRAIFLNGVLHGFSWDGAPSLAPALALTTWRSVLWFLVAYCAGTMLAMSATTTVIGEGSVRVGQALDQPDIPRKLSVVSSFIAIAIGAVWLLKAI 783
            + GG+LAG LHAV+GPDHLAALLPR +G+ W+++MRIGAVWGLGHG SA+ +G+ AF  K RL   S+  ++ ++  +TE L+GVSLI IGLLGLKE+   ++      +  E  ++ +   G+A++  T       GK     A+FLNG+LHGFSWDG P+LAPALA  +W  V+ FL +Y  GTML+MS  T++IGEG+V+VGQALD+P+IP+KL+  SS +AI +G VW +KA+
Sbjct:  137 ISGGMLAGSLHAVTGPDHLAALLPRCIGKRWYQAMRIGAVWGLGHGISAIIMGMVAFFLKGRLSTYSHSTLIPKLSLYTEVLIGVSLIIIGLLGLKEAA-HFDVSAVMPLEAEGSITGSGASGAAKKKAT-------GK-----AVFLNGLLHGFSWDGTPTLAPALAFDSWLPVMTFLCSYGLGTMLSMSTATSLIGEGTVKVGQALDKPNIPKKLAQGSSVVAILVGLVWTVKAL 360          
BLAST of mRNA_C-tenellus_contig1055.1.1 vs. uniprot
Match: A0A7S2Y0T2_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y0T2_9STRA)

HSP 1 Score: 228 bits (580), Expect = 2.280e-70
Identity = 127/245 (51.84%), Postives = 169/245 (68.98%), Query Frame = 1
Query:   52 SAAKVAAVGGGVLAGGLHAVSGPDHLAALLPRIMGQHWHRSMRIGAVWGLGHGFSAMAIGLAAFLFKDRLGLGSNPAVVARMGTWTEGLVGVSLIAIGLLGLKESLLDYEGGEHATMHEERGVSMTATEGSAEEDRTLTTVEVIGKRGGQRAIFLNGVLHGFSWDGAPSLAPALALTTWRSVLWFLVAYCAGTMLAMSATTTVIGEGSVRVGQALDQPDIPRKLSVVSSFIAIAIGAVWLLKAIL 786
            SAA +A+VGGGVL+G LHA+SGPDHLAA++PR +G+ W  SM++GA+WGLGHG S + +GL AFL KD+L L  +P +++ + TWTE LVG+SLI IG LG+KES                  S  + + +A+E     + +   K G  ++IF NG+LHG SWDG PSLAPALA TTWR V+ FL AYC G +++MS  T++IGEGSVRVG+  D P IP++LS+ SS +AI IG +W  K IL
Sbjct:   86 SAASLASVGGGVLSGSLHAISGPDHLAAVVPRCIGKRWWISMQVGALWGLGHGVSGLMMGLFAFLVKDKLNLNKSP-MISNLSTWTEILVGLSLILIGFLGVKESR-----------------SFDSDKAAAKEKLEQESGK---KTGSFKSIFFNGLLHGLSWDGTPSLAPALAFTTWRPVVGFLSAYCWGVVVSMSMCTSLIGEGSVRVGR--DNPKIPQQLSMFSSGLAIVIGLLWTGKGIL 307          
BLAST of mRNA_C-tenellus_contig1055.1.1 vs. uniprot
Match: A0A7S4J5D2_9STRA (Hypothetical protein n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4J5D2_9STRA)

HSP 1 Score: 216 bits (551), Expect = 5.190e-66
Identity = 123/238 (51.68%), Postives = 159/238 (66.81%), Query Frame = 1
Query:   58 AKVAAVGGGVLAGGLHAVSGPDHLAALLPRIMGQHWHRSMRIGAVWGLGHGFSAMAIGLAAFLFKDRLG-LGSNPAVVARMGTWTEGLVGVSLIAIGLLGLKESLLDYEGGEHATMHEERGVSMTATEGSAEEDRTLTTVEVIGKRGGQRAIFLNGVLHGFSWDGAPSLAPALALTTWRSVLWFLVAYCAGTMLAMSATTTVIGEGSVRVGQALDQPDIPRKLSVVSSFIAIAIGAVW 768
            A   A+ GGV AGGLHA++GPDHLAALLPR  GQ W+R+ RIGA+WG+GHG SA  +G+ AF  K+R+  +G+   +V     + E  VG SL+ IGLLG+KE+  ++E        E  G S  +   +A ED     V+V  KR    A+  NGVLHGFSWDGAPSLAPA+A+ TWR  + FL+AY  GTM AM+ TTT+IGEG+ + G+ L +PDIP+KLS VSS IAI +G  W
Sbjct:   80 ALAGAISGGVFAGGLHAIAGPDHLAALLPRCCGQRWYRAGRIGALWGMGHGVSATILGVCAFALKNRMSKMGAFSNIVHGASAFMEVAVGASLVFIGLLGIKEAR-EWEA-------EIEGGSPQSLSAAAGEDG----VKVAQKR----AVVFNGVLHGFSWDGAPSLAPAVAVATWRGNITFLLAYALGTMAAMTITTTLIGEGTRKAGEVLHRPDIPQKLSFVSSIIAIGVGLFW 301          
BLAST of mRNA_C-tenellus_contig1055.1.1 vs. uniprot
Match: A0A1Z5K7J2_FISSO (Uncharacterized protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K7J2_FISSO)

HSP 1 Score: 215 bits (547), Expect = 1.500e-65
Identity = 118/240 (49.17%), Postives = 155/240 (64.58%), Query Frame = 1
Query:   70 AVGGGVLAGGLHAVSGPDHLAALLPRIMGQHWHRSMRIGAVWGLGHGFSAMAIGLAAFLFKDRL-GLGSNPAVVARMGTWTEGLVGVSLIAIGLLGLKESLLDYEGGEHATMHEERGVSMTATEGSAEEDRTLTTVEVIGKRGGQ-RAIFLNGVLHGFSWDGAPSLAPALALTTWRSVLWFLVAYCAGTMLAMSATTTVIGEGSVRVGQALDQPDIPRKLSVVSSFIAIAIGAVWLLKAI 783
            A+ GG+ AGGLHA++GPDHLAALLPR  GQ W+R++R+GA+WG+GHG SA  +GL AF  K  +  +     V+A     TE  VG+SLI IG++G++E+              E    +T T G+++        EV  K   Q RA+  NG+LHGFSWDGAPSLAPA+A+ TW   L FL AY  GTM  M+  TT+IGEG+ + GQ LD+PDIP+KLS VSS +A+ IGAVW   A+
Sbjct:   69 AITGGLFAGGLHAIAGPDHLAALLPRCCGQRWYRAVRVGALWGMGHGLSATVLGLTAFGLKSTVQNMKGMQKVLAGASHVTEIAVGLSLIVIGVMGIREA-------------REWEQDLTTTMGASQSLSAAVVDEVASKHSTQKRAVLFNGILHGFSWDGAPSLAPAVAVATWGGSLAFLSAYAIGTMTTMALATTLIGEGTRKAGQVLDRPDIPQKLSFVSSILAMVIGAVWCYLAV 295          
BLAST of mRNA_C-tenellus_contig1055.1.1 vs. uniprot
Match: A0A7R9ZBQ6_9STRA (Hypothetical protein n=2 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9ZBQ6_9STRA)

HSP 1 Score: 214 bits (545), Expect = 4.540e-65
Identity = 119/238 (50.00%), Postives = 156/238 (65.55%), Query Frame = 1
Query:   58 AKVAAVGGGVLAGGLHAVSGPDHLAALLPRIMGQHWHRSMRIGAVWGLGHGFSAMAIGLAAFLFKDRLG-LGSNPAVVARMGTWTEGLVGVSLIAIGLLGLKESLLDYEGGEHATMHEERGVSMTATEGSAEEDRTLTTVEVIGKRGGQRAIFLNGVLHGFSWDGAPSLAPALALTTWRSVLWFLVAYCAGTMLAMSATTTVIGEGSVRVGQALDQPDIPRKLSVVSSFIAIAIGAVW 768
            A   AV GGV AGGLHA++GPDHLAALLPR  GQ W+R+ RIGA+WG+GHG SA  +G+ AF  K R+  +G+   VV    ++ E  VG SL+ IGLLG+KE+  ++E         E GV  + +  + E+   +           +RA+  NGVLHGFSWDGAPSLAPA+A+ TWR  + FL+AY  GTM AM+  TT+IGEG+ + G+ L +PDIP+KLS VSS IAI +G  W
Sbjct:   83 ALAGAVSGGVFAGGLHAIAGPDHLAALLPRCCGQRWYRAGRIGALWGMGHGVSATILGVCAFALKSRMSKMGAFSRVVRGASSFMEIAVGASLVFIGLLGIKEAR-EWEA------EIEGGVPQSLSAAAGEDGMKVAQ---------KRAVVFNGVLHGFSWDGAPSLAPAIAVATWRGNITFLLAYALGTMGAMTIATTLIGEGTRKAGEVLHRPDIPQKLSYVSSIIAIGVGLFW 304          
BLAST of mRNA_C-tenellus_contig1055.1.1 vs. uniprot
Match: B8BSK2_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BSK2_THAPS)

HSP 1 Score: 211 bits (536), Expect = 4.610e-63
Identity = 118/245 (48.16%), Postives = 156/245 (63.67%), Query Frame = 1
Query:   67 AAVGGGVLAGGLHAVSGPDHLAALLPRIMGQHWHRSMRIGAVWGLGHGFSAMAIGLAAFLFKDRLGL--------GSNPAVVARMGTWTEGLVGVSLIAIGLLGLKESLLDYEGGEHATMHEERGVSMTATEGSAEEDRTLTTVEVIGK---RGGQRAIFLNGVLHGFSWDGAPSLAPALALTTWRSVLWFLVAYCAGTMLAMSATTTVIGEGSVRVGQALDQPDIPRKLSVVSSFIAIAIGAVW 768
            A + GG+ AG LHA++GPDHLAAL+PR  G  W+R+ RIGAVWGLGHG SA  +G+A +L K  + L        G    V+   G++ E  +GVSLI IGLLG+KE+      GE A    E   + T  E   ++ ++L+          +  + AI  NG+LHGFSWDGAPSLAPA+A++TWR  L FL++Y  GTM AM+  TTVIGEG+ R    LD+PD+PR LSV SSF+A+ +G VW
Sbjct:  116 ATITGGLFAGSLHAIAGPDHLAALIPRCCGLPWYRAARIGAVWGLGHGVSATLLGMAGYLVKRGVNLFGHGGVMGGGKFDVLHHAGSFMELAIGVSLIVIGLLGIKEAREWESPGESAC---EVTDAATGEEEGGQQPQSLSAAVTPNSSPIKTAKSAILFNGILHGFSWDGAPSLAPAVAISTWRGSLTFLISYALGTMAAMTLATTVIGEGTRRASDKLDRPDLPRDLSVGSSFLALIVGVVW 357          
BLAST of mRNA_C-tenellus_contig1055.1.1 vs. uniprot
Match: A0A0G4EAE2_VITBC (Uncharacterized protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4EAE2_VITBC)

HSP 1 Score: 213 bits (542), Expect = 5.060e-63
Identity = 124/251 (49.40%), Postives = 162/251 (64.54%), Query Frame = 1
Query:   49 ISAAKVAAVGGGVLAGGLHAVSGPDHLAALLPRIMGQHWHRSMRIGAVWGLGHGFSAMAIGLAAFLFKDRL------GLGSNPAVVARMGTWTEGLVGVSLIAIGLLGLKESLLDYEGGEHATMHEERGVSMTATEGSAEEDRTLTTVEVIGKRGGQRAIFLNGVLHGFSWDGAPSLAPALALTTWRSVLWFLVAYCAGTMLAMSATTTVIGEGSVRVGQALDQPDIPRKLSVVSSFIAIAIGAVWLLKAI 783
            + AA +  VGGG LAG LHAVSGPDHLAALLP+ +G+ W  + ++G VWGLGHG SAM +G+ AF+ KDR+      GL    A++ RM TWTEGLVG+SLI IG  G KE+   ++  E     + R     A E   E  R L+      +RG    +F NG+LHGFS DGAP LAP+L+ T W +V  FL++YC GTML MSA +   GEGS+R+ +A+D+PDIP++L+  +S  A  IG VW  KAI
Sbjct:  205 LPAASIVTVGGGALAGSLHAVSGPDHLAALLPQCLGRRWTGAGKLGLVWGLGHGLSAMIMGMLAFVLKDRIFVMDAAGLHGG-ALIERMETWTEGLVGLSLILIGFFGYKEAR-SWDAEELQAQLDAR-----AKEEQKEGYRDLSASL---RRG--LTLFFNGMLHGFSLDGAPGLAPSLSFTRWPAVFLFLLSYCTGTMLTMSACSAAAGEGSIRLTRAVDRPDIPKRLAFGASAFAAGIGIVWFAKAI 443          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig1055.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LJP2_ECTSI1.820e-11274.04Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YVB1_9STRA1.390e-9867.92Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A4D9DEM4_9STRA9.390e-7451.90Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
W7TPT7_9STRA1.200e-7151.48Uncharacterized protein n=2 Tax=Nannochloropsis ga... [more]
A0A7S2Y0T2_9STRA2.280e-7051.84Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S4J5D2_9STRA5.190e-6651.68Hypothetical protein n=2 Tax=Odontella aurita TaxI... [more]
A0A1Z5K7J2_FISSO1.500e-6549.17Uncharacterized protein n=1 Tax=Fistulifera solari... [more]
A0A7R9ZBQ6_9STRA4.540e-6550.00Hypothetical protein n=2 Tax=Pseudictyota dubia Ta... [more]
B8BSK2_THAPS4.610e-6348.16Uncharacterized protein n=1 Tax=Thalassiosira pseu... [more]
A0A0G4EAE2_VITBC5.060e-6349.40Uncharacterized protein n=1 Tax=Vitrella brassicaf... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig1055contigC-tenellus_contig1055:109..2015 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LJP2
Preferred nameNIK1
PFAMsDsbD_2
Model size792
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons3
Evalue2.99e-113
EggNOG OGs28N5Y@1|root,2QUR7@2759|Eukaryota
Ec32 ortholog descriptionconserved unknown protein
Ec32 orthologEc-17_002800.1
Cds size792
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789137.0791214-CDS-C-tenellus_contig1055:108..2671680789137.0791214-CDS-C-tenellus_contig1055:108..267Choristocarpus tenellus KU2346CDSC-tenellus_contig1055 109..267 -
1680789137.091722-CDS-C-tenellus_contig1055:889..12851680789137.091722-CDS-C-tenellus_contig1055:889..1285Choristocarpus tenellus KU2346CDSC-tenellus_contig1055 890..1285 -
1680789137.1089919-CDS-C-tenellus_contig1055:1778..20151680789137.1089919-CDS-C-tenellus_contig1055:1778..2015Choristocarpus tenellus KU2346CDSC-tenellus_contig1055 1779..2015 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig1055.1.1prot_C-tenellus_contig1055.1.1Choristocarpus tenellus KU2346polypeptideC-tenellus_contig1055 109..2015 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-tenellus_contig1055.1.1

>prot_C-tenellus_contig1055.1.1 ID=prot_C-tenellus_contig1055.1.1|Name=mRNA_C-tenellus_contig1055.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=264bp
MGLGPGCPPAILATTFISAAKVAAVGGGVLAGGLHAVSGPDHLAALLPRI
MGQHWHRSMRIGAVWGLGHGFSAMAIGLAAFLFKDRLGLGSNPAVVARMG
TWTEGLVGVSLIAIGLLGLKESLLDYEGGEHATMHEERGVSMTATEGSAE
EDRTLTTVEVIGKRGGQRAIFLNGVLHGFSWDGAPSLAPALALTTWRSVL
WFLVAYCAGTMLAMSATTTVIGEGSVRVGQALDQPDIPRKLSVVSSFIAI
AIGAVWLLKAILW*
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mRNA from alignment at C-tenellus_contig1055:109..2015-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-tenellus_contig1055.1.1 ID=mRNA_C-tenellus_contig1055.1.1|Name=mRNA_C-tenellus_contig1055.1.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=1907bp|location=Sequence derived from alignment at C-tenellus_contig1055:109..2015- (Choristocarpus tenellus KU2346)
ATGGGATTAGGTCCTGGATGCCCACCGGCTATATTGGCCACGACTTTCAT TAGCGCAGCCAAGGTCGCAGCTGTGGGAGGGGGGGTTTTGGCAGGAGGGC TTCATGCAGTTTCTGGACCTGATCATCTGGCAGCACTGCTTCCTCGTATA ATGGGACAACATTGGCACCGTTCGATGCGAATCGGGGCCGTCTGGGGTTT GGGACATGGGTTTAGTGCCATGGCGATTGGACTTGCGGTGGGTTCATTCG AAGATTTCTTGTCCACGCTACTGGTATTGAAGCACTACCACACCAGGTCA ATCATGCTGGTATCATTTCTTCCCGTATACCCTAGTGGCTACTTCAGTTA GGAATCTACGTGTCGCAGATGATACAAGCCGGTGGTAGCATGGGACAGCA GTTCTATCCTGAAATGGTAGAGCGAGATCTATGCTATGCTATGTGTTCAA TTCCAACGACAATTTGACTTTGCTAGATTCGCTCTTTACAACCCTGATAA CCTTATAATGCCATGAAAAATTACGTTCCCCCTGCTCCATTTAATCAAGG CAGCTCTTACGTTGTATGCCTTTGGTGTCATACTGCAGTGGTGGAGCGTC GGTGGTCAGTGCACAAAATGTTTTTCATTCTAACCATTAGTAACCTCTCT TTCTTGAGCCTCTTGACAGCCCAAACCTACACCTCCCGCGGTGAACTTTA TCTGGGTTTTGACACCTTACGCTTGGGCAGGCGTTTCTCTTCAAAGATCG CCTGGGGTTAGGATCAAACCCCGCCGTTGTGGCAAGGATGGGCACCTGGA CAGAAGGCTTGGTGGGTGTCTCCTTGATTGCGATTGGTCTCTTGGGATTA AAGGAGTCTCTGCTAGACTATGAGGGGGGTGAGCATGCTACAATGCATGA GGAAAGGGGTGTCAGCATGACTGCCACAGAGGGGAGCGCTGAGGAGGATC GTACATTGACTACAGTCGAGGTCATTGGGAAGAGAGGTGGACAAAGGGCA ATATTTTTGAATGGGGTTTTGCATGGATTCTCCTGGGATGGTGCCCCCAG CTTGGCTCCTGCTCTGGCTTTGACTACCTGGAGAAGTGTGCTGTGGTTCC TTGTGGCCTACTGCGCAGGGACCATGGTGAGATGTTGCAGAGAAAGATGG GATTGATGAGGGGTGGGGTAGCATTTTTAAAAGCGAGGGGTGCAATGGAG GTATGGTGGGTCTTCGGATTGGAAGTTGGGGGGGGGGGGGGGGGGGGGGG GGGGGGGGGGGGGGGGGATTTCGTGGTGGGGGTGGGGGAAAAAGAATTTT TTTTTTTTTTTTAAACTTTTTTTTTTTTTTTTTTTTTTTTTTTNNNNNNN NNNTTCTCGGCCGCGGGCGGGCGCGGGGGGGTGGTGTGGGGGGGGGGGGG GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTGAGAGGGCGAGAGCGTCAT ATCTGCTCGATGTTGGACGACATAGACCTCTTATTTTTTTACAGCACATG CTTCTTATTCTTATTCTTCTTATTCTTGACAATAATTTGGATTGTGAATG TTTTGTGGATTTCTCTATCTCTCTACAAAGCAACATTGCCTGTGGTCACA GTTTGTACTAGGCTGTTTGCCTCAGTTTCTCCTCCACCTTGCGCTTACTT CTGTCCTCCGTGTGTTTCTTCACACCATTCTCACTCGATTCGTACAACCC CCTGCTACCCACCCCACCCCCTACTTCCCTTCGCCCCCGTGACCCAAGTT GGCCATGTCTGCCACGACGACTGTTATCGGGGAAGGCAGTGTGCGAGTAG GACAGGCGTTGGACCAGCCAGACATCCCCCGCAAGCTCTCTGTCGTATCC TCCTTTATTGCAATCGCCATTGGTGCTGTTTGGCTCCTCAAGGCCATCCT ATGGTGA
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Coding sequence (CDS) from alignment at C-tenellus_contig1055:109..2015-

>mRNA_C-tenellus_contig1055.1.1 ID=mRNA_C-tenellus_contig1055.1.1|Name=mRNA_C-tenellus_contig1055.1.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=792bp|location=Sequence derived from alignment at C-tenellus_contig1055:109..2015- (Choristocarpus tenellus KU2346)
ATGGGATTAGGTCCTGGATGCCCACCGGCTATATTGGCCACGACTTTCAT
TAGCGCAGCCAAGGTCGCAGCTGTGGGAGGGGGGGTTTTGGCAGGAGGGC
TTCATGCAGTTTCTGGACCTGATCATCTGGCAGCACTGCTTCCTCGTATA
ATGGGACAACATTGGCACCGTTCGATGCGAATCGGGGCCGTCTGGGGTTT
GGGACATGGGTTTAGTGCCATGGCGATTGGACTTGCGGCGTTTCTCTTCA
AAGATCGCCTGGGGTTAGGATCAAACCCCGCCGTTGTGGCAAGGATGGGC
ACCTGGACAGAAGGCTTGGTGGGTGTCTCCTTGATTGCGATTGGTCTCTT
GGGATTAAAGGAGTCTCTGCTAGACTATGAGGGGGGTGAGCATGCTACAA
TGCATGAGGAAAGGGGTGTCAGCATGACTGCCACAGAGGGGAGCGCTGAG
GAGGATCGTACATTGACTACAGTCGAGGTCATTGGGAAGAGAGGTGGACA
AAGGGCAATATTTTTGAATGGGGTTTTGCATGGATTCTCCTGGGATGGTG
CCCCCAGCTTGGCTCCTGCTCTGGCTTTGACTACCTGGAGAAGTGTGCTG
TGGTTCCTTGTGGCCTACTGCGCAGGGACCATGTTGGCCATGTCTGCCAC
GACGACTGTTATCGGGGAAGGCAGTGTGCGAGTAGGACAGGCGTTGGACC
AGCCAGACATCCCCCGCAAGCTCTCTGTCGTATCCTCCTTTATTGCAATC
GCCATTGGTGCTGTTTGGCTCCTCAAGGCCATCCTATGGTGA
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