mRNA_C-tenellus_contig10472.1.1 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig10472.1.1 vs. uniprot
Match: A0A7S3H2J5_9STRA (UMP-CMP kinase n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H2J5_9STRA) HSP 1 Score: 175 bits (443), Expect = 1.280e-52 Identity = 81/120 (67.50%), Postives = 99/120 (82.50%), Query Frame = 1 Query: 61 RYEVIFVLGGPGAGKGTQCALIVENFGYVHLSAGDLLRAERKTGSDLAGMINEYIKEGKIVPAEVTIGLLKTTMQKSGSSKFLVDGFPRNEENLSSWTDIMASCTDVNFLLFLDCPEDVM 420 +Y+++FVLGGPG+GKGT C IVE FGYVHLSAGDLLRAER++GS+LA MIN YIKEGKIVPAEVT+ LL+ ++ SG+ KFLVDGFPR+ +NL W M++ DV FLLFLDCP +VM Sbjct: 40 KYKIVFVLGGPGSGKGTNCTRIVERFGYVHLSAGDLLRAERESGSELADMINTYIKEGKIVPAEVTVRLLRNAIESSGNHKFLVDGFPRDLQNLECWKANMSAIADVQFLLFLDCPHEVM 159
BLAST of mRNA_C-tenellus_contig10472.1.1 vs. uniprot
Match: D8LRC1_ECTSI (UMP-CMP kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRC1_ECTSI) HSP 1 Score: 171 bits (433), Expect = 6.500e-51 Identity = 88/141 (62.41%), Postives = 109/141 (77.30%), Query Frame = 1 Query: 7 RGMASTGTPGLSADTPSPRYEVIFVLGGPGAGKGTQCALIVEN--FGYVHLSAGDLLRAERKTGSDLAGMINEYIKEGKIVPAEVTIGLLKTTMQKSGSSKFLVDGFPRNEENLSSWTDIMAS-CTDVNFLLFLDCPEDVM 420 RG+++ G+ G TP V+FVLGGPG+GKGTQCALI E GY HLSAGDLLRAER +GS+LAGMINE+I+EGKIVPAEVT+GLL+ M+KSG S+FL+DGFPRN +NL++W A V+F LFLDCPE++M Sbjct: 42 RGVSNGGSVGA---TP----HVVFVLGGPGSGKGTQCALIAEEEALGYAHLSAGDLLRAERNSGSELAGMINEFIREGKIVPAEVTVGLLRKAMEKSGKSRFLIDGFPRNPDNLAAWEASTAGGAVVVDFALFLDCPEEIM 175
BLAST of mRNA_C-tenellus_contig10472.1.1 vs. uniprot
Match: A0A6H5KTI0_9PHAE (UMP-CMP kinase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTI0_9PHAE) HSP 1 Score: 169 bits (429), Expect = 2.330e-50 Identity = 82/121 (67.77%), Postives = 99/121 (81.82%), Query Frame = 1 Query: 67 EVIFVLGGPGAGKGTQCALIVEN--FGYVHLSAGDLLRAERKTGSDLAGMINEYIKEGKIVPAEVTIGLLKTTMQKSGSSKFLVDGFPRNEENLSSWTDIMAS-CTDVNFLLFLDCPEDVM 420 V+FVLGGPG+GKGTQCALI E GY HLSAGDLLRAER +GS+LAGMINE+I+EGKIVPAEVT+GLL+ M+KSG S+FL+DGFPRN +NL++W A V+F LFLDCPE++M Sbjct: 51 HVVFVLGGPGSGKGTQCALIAEEEALGYAHLSAGDLLRAERNSGSELAGMINEFIREGKIVPAEVTVGLLRKAMEKSGKSRFLIDGFPRNPDNLAAWEASTAGGAVVVDFALFLDCPEEIM 171
BLAST of mRNA_C-tenellus_contig10472.1.1 vs. uniprot
Match: A0A7R9U9N9_9STRA (UMP-CMP kinase n=2 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U9N9_9STRA) HSP 1 Score: 167 bits (422), Expect = 2.430e-48 Identity = 75/120 (62.50%), Postives = 95/120 (79.17%), Query Frame = 1 Query: 61 RYEVIFVLGGPGAGKGTQCALIVENFGYVHLSAGDLLRAERKTGSDLAGMINEYIKEGKIVPAEVTIGLLKTTMQKSGSSKFLVDGFPRNEENLSSWTDIMASCTDVNFLLFLDCPEDVM 420 R E IFVLGGPG+GKGTQC+L+ E FGYVH+SAGDLLRAER+ G L +I ++I EGKIVP+ +T+ LL+ M SG +FL+DGFPR+EENL++W DIM +V +LLFLDCPE+VM Sbjct: 103 RLECIFVLGGPGSGKGTQCSLLHERFGYVHISAGDLLRAERRKGGPLGRLIEDHISEGKIVPSSITVQLLRDAMTSSGQRRFLIDGFPRSEENLAAWEDIMTDVAEVKYLLFLDCPEEVM 222
BLAST of mRNA_C-tenellus_contig10472.1.1 vs. uniprot
Match: A9VA79_MONBE (UMP-CMP kinase n=1 Tax=Monosiga brevicollis TaxID=81824 RepID=A9VA79_MONBE) HSP 1 Score: 163 bits (412), Expect = 2.750e-48 Identity = 75/116 (64.66%), Postives = 93/116 (80.17%), Query Frame = 1 Query: 70 VIFVLGGPGAGKGTQCALIVENFGYVHLSAGDLLRAERKTGSDLAGMINEYIKEGKIVPAEVTIGLLKTTMQKSGSSKFLVDGFPRNEENLSSWTDIMASCTDVNFLLFLDCPEDV 417 V+FVLG PGAGKGTQ + IV+NF + HLSAGDLLRAER TGSDLA +IN YIKEGKIVP ++T GL++ MQ+ +SKFL+DGFPRN++NL W ++MA D F+LFLDCP +V Sbjct: 6 VVFVLGPPGAGKGTQSSNIVKNFNFTHLSAGDLLRAERNTGSDLADLINGYIKEGKIVPVKITCGLIEKAMQEDPNSKFLIDGFPRNKDNLDGWNEVMADKVDARFVLFLDCPAEV 121
BLAST of mRNA_C-tenellus_contig10472.1.1 vs. uniprot
Match: A0A6U4G9K0_9STRA (UMP-CMP kinase n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4G9K0_9STRA) HSP 1 Score: 164 bits (416), Expect = 6.410e-48 Identity = 78/141 (55.32%), Postives = 101/141 (71.63%), Query Frame = 1 Query: 13 MASTGTPGLSADTPSPR-----YEVIFVLGGPGAGKGTQCALIVENFGYVHLSAGDLLRAERKTGSDLAGMINEYIKEGKIVPAEVTIGLLKTTMQKSGSSKFLVDGFPRNEENLSSWTDIMASCTDVNFLLFLDCPEDVM 420 +A TP + A + + R E IFVLGGPG+GKGTQCAL+ E FGYVH+SAGDLLRAER+ G + +I +YIKEGKIVP+ +T+ LL+ M SG +FL+DGFPR+EENL +W + + DV +LLFLDCPE+ M Sbjct: 60 VACMATPAVDASSGTARGGESGIECIFVLGGPGSGKGTQCALLQERFGYVHISAGDLLRAERRKGGPVGTLIEDYIKEGKIVPSSITVQLLRNAMVSSGKQRFLIDGFPRSEENLHAWQEELDGVIDVKYLLFLDCPEETM 200
BLAST of mRNA_C-tenellus_contig10472.1.1 vs. uniprot
Match: A0A7S0MPR2_9CRYP (UMP-CMP kinase n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0MPR2_9CRYP) HSP 1 Score: 160 bits (406), Expect = 1.810e-47 Identity = 76/119 (63.87%), Postives = 90/119 (75.63%), Query Frame = 1 Query: 67 EVIFVLGGPGAGKGTQCALIVENFGYVHLSAGDLLRAERKTGSDLAGMINEYIKEGKIVPAEVTIGLLKTTMQKSGSSKFLVDGFPRNEENLSSWTDIMASCTDVNFLLFLDCPEDVMQ 423 V+FVLGGPGAGKGTQCA IVE FG+ HLSAGDLLR ERK+GS A +IN YIKEGKIVP E+T+ LLK MQKS KFLVDGFPR+ +N W ++ DV+F LF +CPED ++ Sbjct: 11 RVVFVLGGPGAGKGTQCAKIVETFGWCHLSAGDLLREERKSGSADADLINTYIKEGKIVPVEITVKLLKNAMQKSEIKKFLVDGFPRSVDNYEGWERVVGDSADVDFCLFYECPEDELE 129
BLAST of mRNA_C-tenellus_contig10472.1.1 vs. uniprot
Match: A0A6U4GJ68_9STRA (UMP-CMP kinase n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4GJ68_9STRA) HSP 1 Score: 164 bits (416), Expect = 2.800e-47 Identity = 78/141 (55.32%), Postives = 101/141 (71.63%), Query Frame = 1 Query: 13 MASTGTPGLSADTPSPR-----YEVIFVLGGPGAGKGTQCALIVENFGYVHLSAGDLLRAERKTGSDLAGMINEYIKEGKIVPAEVTIGLLKTTMQKSGSSKFLVDGFPRNEENLSSWTDIMASCTDVNFLLFLDCPEDVM 420 +A TP + A + + R E IFVLGGPG+GKGTQCAL+ E FGYVH+SAGDLLRAER+ G + +I +YIKEGKIVP+ +T+ LL+ M SG +FL+DGFPR+EENL +W + + DV +LLFLDCPE+ M Sbjct: 117 VACMATPAVDASSGTARGGESGIECIFVLGGPGSGKGTQCALLQERFGYVHISAGDLLRAERRKGGPVGTLIEDYIKEGKIVPSSITVQLLRNAMVSSGKQRFLIDGFPRSEENLHAWQEELDGVIDVKYLLFLDCPEETM 257
BLAST of mRNA_C-tenellus_contig10472.1.1 vs. uniprot
Match: A0A8B7Y3J3_ACAPL (UMP-CMP kinase n=2 Tax=Acanthaster planci TaxID=133434 RepID=A0A8B7Y3J3_ACAPL) HSP 1 Score: 159 bits (402), Expect = 1.320e-46 Identity = 75/116 (64.66%), Postives = 91/116 (78.45%), Query Frame = 1 Query: 70 VIFVLGGPGAGKGTQCALIVENFGYVHLSAGDLLRAERKTGSDLAGMINEYIKEGKIVPAEVTIGLLKTTMQKSGSSKFLVDGFPRNEENLSSWTDIMASCTDVNFLLFLDCPEDV 417 VIFVLG PG+GKGTQ A IV+ FG+VHLSAGDLLRAER TGSD++ +I +YIK+GKIVP E+T+GLL+ M S KFL+DGFPRNE+NLS W M TDV F+LF +C +DV Sbjct: 28 VIFVLGAPGSGKGTQSANIVKEFGFVHLSAGDLLRAERNTGSDISTVIEQYIKDGKIVPVEITVGLLEKAMNASSVQKFLIDGFPRNEDNLSGWQKTMDDKTDVRFVLFFECSKDV 143
BLAST of mRNA_C-tenellus_contig10472.1.1 vs. uniprot
Match: A0A7S3B026_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3B026_9EUKA) HSP 1 Score: 156 bits (394), Expect = 5.260e-46 Identity = 74/118 (62.71%), Postives = 89/118 (75.42%), Query Frame = 1 Query: 70 VIFVLGGPGAGKGTQCALIVENFGYVHLSAGDLLRAERKTGSDLAGMINEYIKEGKIVPAEVTIGLLKTTMQKSGSSKFLVDGFPRNEENLSSWTDIMASCTDVNFLLFLDCPEDVMQ 423 V+FVLGGPGAGKGTQ IV + YVHLSAGDLLRAERK+GSD A +IN+YI EGKIVP E+T+GLL ++ +G +FLVDGFPRN NLS W ++ V +LF DCPEDVM+ Sbjct: 38 VVFVLGGPGAGKGTQSEHIVNKYSYVHLSAGDLLRAERKSGSDKAQLINDYIAEGKIVPVEITVGLLMDAIKANGGKRFLVDGFPRNTNNLSGWQQVVGDELQVVGVLFYDCPEDVME 155 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig10472.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig10472.1.1 >prot_C-tenellus_contig10472.1.1 ID=prot_C-tenellus_contig10472.1.1|Name=mRNA_C-tenellus_contig10472.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=140bp MASTGTPGLSADTPSPRYEVIFVLGGPGAGKGTQCALIVENFGYVHLSAGback to top mRNA from alignment at C-tenellus_contig10472:480..1567+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig10472.1.1 ID=mRNA_C-tenellus_contig10472.1.1|Name=mRNA_C-tenellus_contig10472.1.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=1088bp|location=Sequence derived from alignment at C-tenellus_contig10472:480..1567+ (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig10472:480..1567+ >mRNA_C-tenellus_contig10472.1.1 ID=mRNA_C-tenellus_contig10472.1.1|Name=mRNA_C-tenellus_contig10472.1.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=420bp|location=Sequence derived from alignment at C-tenellus_contig10472:480..1567+ (Choristocarpus tenellus KU2346)back to top |