mRNA_C-tenellus_contig10426.2.1 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig10426.2.1 vs. uniprot
Match: A0A6H5L2A6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2A6_9PHAE) HSP 1 Score: 218 bits (555), Expect = 1.280e-59 Identity = 117/190 (61.58%), Postives = 147/190 (77.37%), Query Frame = 3 Query: 243 LQLVDYLKANKYSAYVLLAMVFVHLSNQYDRYLFSVAEIPFVDYDSYEYALLAGPIFTTVNTISGVLISFLGEVRRVRVLCLAALVWNISTMLVASSGALWQVTLARIGQGLGDAACNPFAAAILRDHFDAGVIGAAMGVYYVGLYAGYSLALSVGTLGYLILGWKMAYALAGATGVLVVVVIYKTVKEP 812 L+L+ YLKANK AYVL+ MV VHLSNQYDRYLFSV++IPFVDYDS ++AL+AGP FT N+++GV++SF G VR VR+L A L+W+ ST VA + WQV LARIGQG+GDAAC+PFA +ILRD+F VIG+A+GVYYVGLYAG+SLAL GTL ++GWK +Y LA G +V + + TV EP Sbjct: 18 LRLLGYLKANKRVAYVLVVMVLVHLSNQYDRYLFSVSKIPFVDYDSLDFALIAGPFFTAFNSLAGVVLSFSGGVRPVRLLSTACLIWSASTGAVAFTHKFWQVALARIGQGIGDAACSPFAVSILRDNFGPEVIGSAIGVYYVGLYAGFSLALGGGTLVDDLVGWKWSYLLAALAGAVVAALTFLTVPEP 207
BLAST of mRNA_C-tenellus_contig10426.2.1 vs. uniprot
Match: D7G660_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G660_ECTSI) HSP 1 Score: 177 bits (450), Expect = 6.860e-46 Identity = 95/160 (59.38%), Postives = 122/160 (76.25%), Query Frame = 3 Query: 333 RYLFSVAEIPFVDYDSYEYALLAGPIFTTVNTISGVLISFLGEVRRVRVLCLAALVWNISTMLVASSGALWQVTLARIGQGLGDAACNPFAAAILRDHFDAGVIGAAMGVYYVGLYAGYSLALSVGTLGYLILGWKMAYALAGATGVLVVVVIYKTVKEP 812 RYLFSV++IPFVDYDS ++AL+AGP FT N+++GV++S +G VR VR+L A LVW+ ST VA + WQV LARIGQG+GDAAC+PFA +ILRD+F VIG+A+GVYYVGLYAG+SLAL GTL ++GWK +Y LA G +V + + TV EP Sbjct: 8 RYLFSVSKIPFVDYDSLDFALIAGPFFTAFNSLAGVVLSLVGGVRPVRLLSTACLVWSASTGAVAFTHKFWQVALARIGQGIGDAACSPFAVSILRDNFGPEVIGSAIGVYYVGLYAGFSLALGAGTLVDDLVGWKWSYLLAALAGAVVAALTFLTVPEP 167
BLAST of mRNA_C-tenellus_contig10426.2.1 vs. uniprot
Match: A0A7S3XP81_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XP81_HETAK) HSP 1 Score: 106 bits (264), Expect = 6.410e-23 Identity = 71/189 (37.57%), Postives = 103/189 (54.50%), Query Frame = 3 Query: 246 QLVDYLKANKYSAYVLLAMVFVHLSNQYDRYLFSVAEIPFVDYDSYEYALLAGPIFTTVNTISGVLISFLGEVRRVRVLCLAALVWNISTMLVASSGALWQVTLARIGQGLGDAACNPFAAAILRDHFDAGVIGAAMGVYYVGLYAGYSLALSVGTLGYLILGWKMAYALAGATGVLVVVVIYKTVKEP 812 +L+DY NKYS YVLL +V + Y R++FSVA+IPF+DY S EY LLAGP+F TI+G+++ + +R L V L A + + Q+ L I G A P ++L D F + GAA+G++ VGL+AGY AL G + Y WK +Y G + +V+ +T+ EP Sbjct: 5 ELLDYGLHNKYSIYVLLVLVSGYFLQNYARFVFSVAKIPFIDYSSVEYGLLAGPLFNIAYTITGLVLGRWIQKKRTTTLACFVGVSGALVALCAITTSFLQLALLTICIGAAMAGYVPVGTSLLSDAFPLRLRGAALGLFNVGLFAGYGFALGAGEVLYEAYAWKWSYLAPGFLLTALSLVLLETLHEP 193
BLAST of mRNA_C-tenellus_contig10426.2.1 vs. uniprot
Match: A0A0L0D8H1_THETB (Major facilitator superfamily transporter protein n=1 Tax=Thecamonas trahens ATCC 50062 TaxID=461836 RepID=A0A0L0D8H1_THETB) HSP 1 Score: 107 bits (266), Expect = 9.260e-22 Identity = 66/189 (34.92%), Postives = 101/189 (53.44%), Query Frame = 3 Query: 255 DYLKANKYSAYVLLAMVFVHLSNQYDRYLFSVAEIPFVDYDS----YEYALLAGPIFTTVNTISGVLISFLGE-VRRVRVLCLAALVWNISTMLVASSGALWQVTLARIGQGLGDAACNPFAAAILRDHFDAGVIGAAMGVYYVGLYAGYSLALSVGTLGYLIL--GWKMAYALAGATGVLVVVVIYKT 800 D+ Y +VL +V +L NQ DRY ++ V + Y +LAGP+FT V T++G+ + ++ + RVR+ A LVW+ +T + ++ WQ+ LAR GQG+G A CNP A ++ ++F G A+G+Y G+Y GYSL S G G + G++ Y G GV + IY T Sbjct: 6 DFFAEGPYPLWVLALLVTAYLLNQLDRYTLAITSKEMVPLGGNGTGFRYQILAGPVFTLVYTLAGLPVGYIADRFNRVRIFVAAILVWSAATAAMGAADTYWQLVLARAGQGMGQAGCNPIANGLIAEYFAPSTRGTALGIYQWGIYTGYSL--SFGAAGPISARYGYRWVYYAFGLAGVPIAAAIYAT 192
BLAST of mRNA_C-tenellus_contig10426.2.1 vs. uniprot
Match: A0A482S7R0_9ARCH (MFS transporter n=1 Tax=archaeon TaxID=1906665 RepID=A0A482S7R0_9ARCH) HSP 1 Score: 98.2 bits (243), Expect = 5.240e-19 Identity = 71/237 (29.96%), Postives = 120/237 (50.63%), Query Frame = 3 Query: 279 SAYVLLAMVFVHLSNQYDRYLFSVAEIPFVDYDSYEYALLAGPIFTTVNTISGVLIS--FLGEVR----------------RVRVLCLAALVWNISTMLVASSGALWQVTLARIGQGLGDAACNPFAAAILRDHFDAGVIGAAMGVYYVGLYAGYSLALSVGTLGYLILGWKMAYALAGATGVLVVVVI--YKTVKEP-VLSVDRRAFVPLNVDT--------NSTSGSRVGEGVHN 902 +A L A+ FV+ +DRYL +V+ +P+VDY SYEY++LAGP FT V T+ G+L + F+ E ++ VL + +++++ S A +++ RI GL + PF+ ++++D F GAA GV+ G Y ++ +LSVGT Y GW+ Y G G+ V ++ +++ P + ++ + L+VD N G+ VG+G N Sbjct: 14 AAITLAALTFVYFLENFDRYLIAVSPVPYVDYTSYEYSVLAGPAFTVVYTVGGLLFALYFMDESATGLTIATNKTGIWKHTKLLVLSVCSVIFSFSFFATALCSQFFELVFIRIAMGLTQSVITPFSTSLIKDIFPPSSTGAAFGVFNAGTYFAFAFSLSVGTYVYNEYGWRAGYVWFGIVGMGVGALLPFLASLQTPSARAEEKEEYSALSVDDSVHNVMQDNDGDGAAVGDGARN 250
BLAST of mRNA_C-tenellus_contig10426.2.1 vs. uniprot
Match: A0A6A4V505_AMPAM (Protein spinster 1 n=2 Tax=Amphibalanus amphitrite TaxID=1232801 RepID=A0A6A4V505_AMPAM) HSP 1 Score: 99.4 bits (246), Expect = 7.080e-19 Identity = 57/148 (38.51%), Postives = 88/148 (59.46%), Query Frame = 3 Query: 384 EYALLAGPIFTTVNTISGVLISFLGE-VRRVRVLCLAALVWNISTMLVASSGALWQVTLARIGQGLGDAACNPFAAAILRDHFDAGVIGAAMGVYYVGLYAGYSLALSVGTL----GYLILGWKMAYALAGATGVLVVVVIYKTVKEP 812 +Y LLAGP+FT V T++G+ + + R +LC LVW + +L + WQ+ R G G G+A C P A ++L D+F + G A+GVY G+Y GYSLA +VG + +GW+ AY ++GA GVL+ +++ T++EP Sbjct: 115 QYDLLAGPVFTLVFTVAGLPLGLAADRCNRKLLLCACLLVWAVCVVLTGLAQRYWQLAALRFGVGFGEAGCTPLATSLLADYFSPELRGTALGVYNWGIYFGYSLAYAVGDFITEADIMGMGWRWAYFMSGAPGVLLALLMLATLREP 262
BLAST of mRNA_C-tenellus_contig10426.2.1 vs. uniprot
Match: UPI001C919BBD (protein spinster homolog 1-like n=1 Tax=Amphibalanus amphitrite TaxID=1232801 RepID=UPI001C919BBD) HSP 1 Score: 97.1 bits (240), Expect = 9.300e-19 Identity = 56/147 (38.10%), Postives = 87/147 (59.18%), Query Frame = 3 Query: 384 EYALLAGPIFTTVNTISGVLISFLGE-VRRVRVLCLAALVWNISTMLVASSGALWQVTLARIGQGLGDAACNPFAAAILRDHFDAGVIGAAMGVYYVGLYAGYSLALSVGTL----GYLILGWKMAYALAGATGVLVVVVIYKTVKE 809 +Y LLAGP+FT V T++G+ + + R +LC LVW + +L + WQ+ R G G G+A C P A ++L D+F + G A+GVY G+Y GYSLA +VG + +GW+ AY ++GA GVL+ +++ T++E Sbjct: 115 QYDLLAGPVFTLVFTVAGLPLGLAADRCNRKLLLCACLLVWAVCVLLTGLAQRYWQLAALRFGVGFGEAGCTPLATSLLADYFSPELRGTALGVYNWGIYFGYSLAYAVGDFITEADIMGMGWRWAYLVSGAPGVLLALLMLATLRE 261
BLAST of mRNA_C-tenellus_contig10426.2.1 vs. uniprot
Match: A0A1S3JVM2_LINUN (probable sphingolipid transporter spinster homolog 2 isoform X1 n=2 Tax=Lingula unguis TaxID=7574 RepID=A0A1S3JVM2_LINUN) HSP 1 Score: 94.7 bits (234), Expect = 2.600e-17 Identity = 58/176 (32.95%), Postives = 97/176 (55.11%), Query Frame = 3 Query: 384 EYALLAGPIFTTVNTISGVLISFLGEVRRV-RVLCLAALV--WNISTMLVASSGALWQVTLARIGQGLGDAACNPFAAAILRDHFDAGVIGAAMGVYYVGLYAGYSLALSVGTLGYLILGWKMAYALAGATGVLVVVVIYKTVKEP-------VLSVDRRAFVPLNVDTNSTSGSR 881 EY +LAGP+F T +GV + E+ R+ R L L+ ++ W++ T+L + A W + + RI GL +A C PFA +IL ++F G A+G+Y +G+YAGY + + GW+ Y +AG+ G+ + +++Y TVKEP + VD+ ++D + +G R Sbjct: 102 EYQMLAGPVFILFFTFAGVPLGITAEITRMNRTLFLSVILMLWSLMTVLTGLAQAYWHIAICRILLGLFEAGCTPFAVSILSEYFTKDYRGVALGIYNLGIYAGYGFSFLANIIDRTS-GWRTVYYIAGSPGIAIALLLYLTVKEPQRNKLFDYVDVDKTGLEKNSIDNHEGTGER 276
BLAST of mRNA_C-tenellus_contig10426.2.1 vs. uniprot
Match: A0A7S3H411_9STRA (Hypothetical protein n=2 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H411_9STRA) HSP 1 Score: 95.1 bits (235), Expect = 2.650e-17 Identity = 56/171 (32.75%), Postives = 91/171 (53.22%), Query Frame = 3 Query: 309 VHLSNQYDRYLFSVAEIPFVDYDSYEYALLAGPIFTTVNTISGVLISFLG----------------EVRRVRVLCLAALVWNISTMLVASSGALWQVTLARIGQGLGDAACNPFAAAILRDHFDAGVIGAAMGVYYVGLYAGYSLALSVGTLGYLILGWKMAYALAGATGV 773 ++ +DR L SV+ IP+VDY SYEY++LAGP FT V T+ GV + L ++ + +L + LV++ + + A + WQ L R+ GL + PF+ +I+ D+F + GAA G++ G Y ++L LS+G Y+ GW+ Y + G G+ Sbjct: 26 IYFLENFDRALISVSPIPYVDYGSYEYSVLAGPAFTIVYTLGGVFFALLSYHDPHSLATKDGAGTWKLNKFAILSVTTLVFSAAFLTTAFALYFWQQVLVRLVMGLSQSIITPFSTSIISDYFPPEMRGAAFGIFNSGTYLSFALTLSLGIYVYVEFGWQAGYIVFGLIGI 196
BLAST of mRNA_C-tenellus_contig10426.2.1 vs. uniprot
Match: A0A1X7V1S1_AMPQE (MFS domain-containing protein n=1 Tax=Amphimedon queenslandica TaxID=400682 RepID=A0A1X7V1S1_AMPQE) HSP 1 Score: 89.7 bits (221), Expect = 1.300e-15 Identity = 54/167 (32.34%), Postives = 99/167 (59.28%), Query Frame = 3 Query: 384 EYALLAGPIFTTVNTISGVLISFLGE-VRRVRVLCLAALVWNISTMLVASSGALWQVTLARIGQGLGDAACNPFAAAILRDHFDAGVIGAAMGVYYVGLYAGYSLALSVGTLGYLILGWKMAYALAGATGVLVVVVIYKTVKEPVLSVDRRAFVPLNVDTNSTSGSR 881 +Y +LAGP+F + I+G+ + L + R +L L+ L+W+++T + + + + R+ LG A CNPFA +I+ D+F + G+A+G+YY G+Y GYSLA ++G + LGW+ + ++ G+++V +++ TVKEP S ++ DT + +G + Sbjct: 163 KYQILAGPVFNNLYPIAGIFMGLLADRFNRKILLGLSLLLWSLATGATGFAVSYVMLVIFRMLLALGAAGCNPFALSIIADYFPQELRGSAVGIYYWGIYFGYSLAYAIGNGVNIGLGWRWVFFISALMGIVLVPLVFFTVKEPKRSTEK--------DTKAVNGDK 321 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig10426.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig10426.2.1 >prot_C-tenellus_contig10426.2.1 ID=prot_C-tenellus_contig10426.2.1|Name=mRNA_C-tenellus_contig10426.2.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=293bp MVKGSKMKNYCSGALQLVDYLKANKYSAYVLLAMVFVHLSNQYDRYLFSVback to top mRNA from alignment at C-tenellus_contig10426:2362..5575+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig10426.2.1 ID=mRNA_C-tenellus_contig10426.2.1|Name=mRNA_C-tenellus_contig10426.2.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=3214bp|location=Sequence derived from alignment at C-tenellus_contig10426:2362..5575+ (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig10426:2362..5575+ >mRNA_C-tenellus_contig10426.2.1 ID=mRNA_C-tenellus_contig10426.2.1|Name=mRNA_C-tenellus_contig10426.2.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=879bp|location=Sequence derived from alignment at C-tenellus_contig10426:2362..5575+ (Choristocarpus tenellus KU2346)back to top |