mRNA_C-tenellus_contig10375.1.1 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig10375.1.1 vs. uniprot
Match: A0A6H5KPF3_9PHAE (GH16 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KPF3_9PHAE) HSP 1 Score: 254 bits (650), Expect = 3.130e-78 Identity = 112/191 (58.64%), Postives = 149/191 (78.01%), Query Frame = 1 Query: 64 VIMLLSWCGR------VKAGWIDPDTKDVYMTKKYAVNDRDFELVFSDEFNRDRRTFEDGHDTRWTAMNKNDYTNDALQFYSHDLVTTKNGSLEITTLNKDITFKYFDTPKRRFQTMKKNYISGMVQTWNKFCFTGGVLEVSAKLPGKADVGGLWPAIWLMGNLARATYVDSSDFVWPWSYNQCDRSTPEK 618 ++ L+W G +A WIDPDT + TK + +DR F+LVFSDEF+R+ RTF DG D RW AM+KNDYTN ALQFYSHD+ T++G+L ITT N D+ F+Y+DTP +++++M K Y+SGM+Q+W+KFCFTGG++E+ A LPG+ D+GGLWPA+WLMGNLARATY SSDF WPWSYN+C+R+T E+ Sbjct: 44 LLSYLAWLGSSGGGGGARASWIDPDTLPEHRTKVFEGDDRQFDLVFSDEFDREGRTFNDGRDPRWMAMHKNDYTNAALQFYSHDMCETRDGALVITTNNTDVEFQYYDTPHKKYKSMAKTYVSGMLQSWDKFCFTGGIVEIRAILPGRPDIGGLWPAMWLMGNLARATYTASSDFTWPWSYNKCNRTTDEQ 234
BLAST of mRNA_C-tenellus_contig10375.1.1 vs. uniprot
Match: A0A835ZJH7_9STRA (Beta-1,6-glucan active enzyme, family GH16 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZJH7_9STRA) HSP 1 Score: 228 bits (580), Expect = 2.700e-67 Identity = 107/173 (61.85%), Postives = 131/173 (75.72%), Query Frame = 1 Query: 100 AGWIDPDTKD-VYMTKKYAVNDRDFELVFSDEFNRDRRTFEDGHDTRWTAMNKNDYTNDALQFYSHDLVTTKNGSLEITTLNKDITFKYFDTPKRRFQTMKKNYISGMVQTWNKFCFTGGVLEVSAKLPGKADVGGLWPAIWLMGNLARATYVDSSDFVWPWSYNQCDRSTPE 615 AGWID DT D Y T D ++ LV SDEF +D R FEDG D RW A++KNDYTN ALQFY+ D VTT +G L++TT N+D+TFKY+D R ++ M KNY SGMV WNKFCF GGV+EVSA LPG+A +GGLWPAIWL+GNLARATY SSD+ WPWSYN+C+R++ + Sbjct: 24 AGWIDADTPDSAYSTASLTTGD-EYLLVMSDEFEKDGRAFEDGMDPRWGALHKNDYTNAALQFYAKDAVTTTDGFLKVTTTNEDVTFKYWDDDARGYKHMTKNYKSGMVMGWNKFCFKGGVVEVSAALPGQAYIGGLWPAIWLLGNLARATYTGSSDYTWPWSYNECNRTSAQ 195
BLAST of mRNA_C-tenellus_contig10375.1.1 vs. uniprot
Match: A0A7S2W6G7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W6G7_9STRA) HSP 1 Score: 219 bits (558), Expect = 1.320e-66 Identity = 105/190 (55.26%), Postives = 134/190 (70.53%), Query Frame = 1 Query: 52 IATAVIMLLSWCGRVKAGWIDPDTKDVYMTKKYAVNDRDFELVFSDEFNRDRRTFEDGHDTRWTAMNKNDYTNDALQFYSHDLVTTKNGSLEITTLNKDITFKYFDTPKRRFQTMKKNYISGMVQTWNKFCFTGGVLEVSAKLPGKADVGGLWPAIWLMGNLARATYVDSSDFVWPWSYNQCDRSTPEKR 621 + ++ LL W V GW+DPDT T + V+ R F+LVFSDEF+ D R+F DG D RWTA++KNDYTN ALQFY LVTT +G L ITT+ + F FD ++ KK++ S MVQ WNKFCFTGG+LEV A LPG+A VGGLWPAIWLMGNLARATYV SS+++WPWS+++C R +++ Sbjct: 9 VVVPLLPLLPWV--VGGGWVDPDTAQGDRTTRALVDGRTFDLVFSDEFDVDHRSFGDGEDPRWTALHKNDYTNTALQFYDKHLVTTSHGMLNITTVPETTEFLAFDDDTMKYHRSKKHFKSAMVQGWNKFCFTGGILEVKALLPGEAYVGGLWPAIWLMGNLARATYVGSSNWMWPWSFDKCSRDLQKQQ 196
BLAST of mRNA_C-tenellus_contig10375.1.1 vs. uniprot
Match: A0A7S2UJ77_9STRA (Hypothetical protein (Fragment) n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UJ77_9STRA) HSP 1 Score: 212 bits (540), Expect = 1.690e-66 Identity = 100/185 (54.05%), Postives = 132/185 (71.35%), Query Frame = 1 Query: 52 IATAVIMLLSWCGRVKAGWIDPDT-KDVYMTKKYA-VNDRDFELVFSDEFNRDRRTFEDGHDTRWTAMNKNDYTNDALQFYSHDLVTTKNGSLEITTLNKDITFKYFDTPKRRFQTMKKNYISGMVQTWNKFCFTGGVLEVSAKLPGKADVGGLWPAIWLMGNLARATYVDSSDFVWPWSYNQCD 600 ++T ++LLS G AGW+DPDT K + TK ++ R ++LVFSDEF ++ R+F DG D +WTA+NKNDYTNDAL FYS D NG + ITT K ++ F+ ++F KK+ SGM+Q WNKFC TGG++E AKLPG + GGLWPA+W++GNLARATYV SSDF+WP+SYNQC+ Sbjct: 27 VSTICLILLSCLGTTMAGWVDPDTPKGFHKTKALTDIDKRQYKLVFSDEFEQEGRSFADGEDPKWTAINKNDYTNDALHFYSSDNARVTNGVMNITTEEKVNEYRAFNEKTKKFYADKKHIQSGMLQGWNKFCLTGGIVEFRAKLPGDSGTGGLWPALWMLGNLARATYVGSSDFMWPYSYNQCN 211
BLAST of mRNA_C-tenellus_contig10375.1.1 vs. uniprot
Match: A0A7S2KNS3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2KNS3_9STRA) HSP 1 Score: 211 bits (536), Expect = 5.620e-66 Identity = 96/169 (56.80%), Postives = 125/169 (73.96%), Query Frame = 1 Query: 100 AGWIDPDTKDVYM--TKKYAVNDRDFELVFSDEFNRDRRTFEDGHDTRWTAMNKNDYTNDALQFYSHDLVTTKNGSLEITTLNKDITFKYFDTPKRRFQTMKKNYISGMVQTWNKFCFTGGVLEVSAKLPGKADVGGLWPAIWLMGNLARATYVDSSDFVWPWSYNQCD 600 AGW+DPDT + ++ T + + R++ELVFSDEF +D R+FEDG D RWTA++KNDYTN+AL FY + V T NG L ITT K +K FD K ++ K+ SGMVQ WNKFC TGG++E +AKLPG GGLWPA+W++GNLARATYV SS+F+WP+SY++CD Sbjct: 29 AGWVDPDTPEEFLSTTAHFEKDTREYELVFSDEFEQDGRSFEDGADPRWTAIDKNDYTNEALHFYKPENVQTTNGVLNITTTQKSNKYKAFDEDKHKYYADAKHIQSGMVQGWNKFCLTGGIIEFNAKLPGDPKTGGLWPALWMLGNLARATYVGSSNFIWPYSYDECD 197
BLAST of mRNA_C-tenellus_contig10375.1.1 vs. uniprot
Match: A0A7S3P470_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3P470_9STRA) HSP 1 Score: 221 bits (563), Expect = 3.170e-65 Identity = 105/172 (61.05%), Postives = 128/172 (74.42%), Query Frame = 1 Query: 91 RVKAGWIDPDTKDVYMTKKYAV--NDRDFELVFSDEFNRDRRTFEDGHDTRWTAMNKNDYTNDALQFYSHDLVTTKNGSLEITTLNKDITFKYFDTPKRRFQTMKKNYISGMVQTWNKFCFTGGVLEVSAKLPGKADVGGLWPAIWLMGNLARATYVDSSDFVWPWSYNQCD 600 RV+A W+DPDT + + +DR++ LVFSDEF + RTF DG+D RWTA+NKNDYTN AL FYSHD V T NG L ITT N+ +K FD K++F KK +GMVQ+WNKFCF GG++E SAKLPG VGGLWPA+W++GNLARATYV SSDF+WP+SYNQCD Sbjct: 23 RVQASWVDPDTPARHDETRALTKGDDREYRLVFSDEFEVEGRTFHDGNDPRWTAINKNDYTNSALHFYSHDNVNTTNGVLNITTENRVNAYKAFDEDKKQFYVDKKYAQTGMVQSWNKFCFVGGIVEFSAKLPGDPGVGGLWPALWMLGNLARATYVGSSDFMWPFSYNQCD 194
BLAST of mRNA_C-tenellus_contig10375.1.1 vs. uniprot
Match: A0A7S2Y0X3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y0X3_9STRA) HSP 1 Score: 209 bits (533), Expect = 7.520e-65 Identity = 101/180 (56.11%), Postives = 131/180 (72.78%), Query Frame = 1 Query: 94 VKAGWIDPDTKDVYMTKKYAVNDRD---FELVFSDEFNRDRRTFEDGHDTRWTAMNKNDYTNDALQFYSHDLVTTKNGSLEITTLNKDITFKYFDTPKRRFQTMKKNYISGMVQTWNKFCFTGGVLEVSAKLPGKADVGGLWPAIWLMGNLARATYVDSSDFVWPWSYNQC-DRSTPEKR 621 V GWIDPDT D + K A++ D ++LVFSDEF RD R+F DGHD RWTA++K+DYTN ALQ+Y+ DLVTT G L ITT + TF+ F+ ++ T +K+Y S M+Q WNKFCFTGG+LE+SA LPG VGGLWPA W+MGNLARAT+ +SD +WPWSY+ C + + P++R Sbjct: 19 VMGGWIDPDTDD---SVKQAISYEDNKVYDLVFSDEFERDGRSFVDGHDPRWTAIDKDDYTNAALQYYTPDLVTTSGGMLNITTTAEKKTFRAFNDTTLKWYTTEKHYQSAMIQGWNKFCFTGGILEISASLPGDPYVGGLWPAAWMMGNLARATFTGTSDNIWPWSYDDCVEENRPKQR 195
BLAST of mRNA_C-tenellus_contig10375.1.1 vs. uniprot
Match: A0A7S2W5Y4_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W5Y4_9STRA) HSP 1 Score: 219 bits (558), Expect = 1.330e-64 Identity = 105/190 (55.26%), Postives = 134/190 (70.53%), Query Frame = 1 Query: 52 IATAVIMLLSWCGRVKAGWIDPDTKDVYMTKKYAVNDRDFELVFSDEFNRDRRTFEDGHDTRWTAMNKNDYTNDALQFYSHDLVTTKNGSLEITTLNKDITFKYFDTPKRRFQTMKKNYISGMVQTWNKFCFTGGVLEVSAKLPGKADVGGLWPAIWLMGNLARATYVDSSDFVWPWSYNQCDRSTPEKR 621 + ++ LL W V GW+DPDT T + V+ R F+LVFSDEF+ D R+F DG D RWTA++KNDYTN ALQFY LVTT +G L ITT+ + F FD ++ KK++ S MVQ WNKFCFTGG+LEV A LPG+A VGGLWPAIWLMGNLARATYV SS+++WPWS+++C R +++ Sbjct: 9 VVVPLLPLLPWV--VGGGWVDPDTAQGDRTTRALVDGRTFDLVFSDEFDVDHRSFGDGEDPRWTALHKNDYTNTALQFYDKHLVTTSHGMLNITTVPETTEFLAFDDDTMKYHRSKKHFKSAMVQGWNKFCFTGGILEVKALLPGEAYVGGLWPAIWLMGNLARATYVGSSNWMWPWSFDKCSRDLQKQQ 196
BLAST of mRNA_C-tenellus_contig10375.1.1 vs. uniprot
Match: B7GDE8_PHATC (Predicted protein n=3 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7GDE8_PHATC) HSP 1 Score: 216 bits (551), Expect = 1.430e-63 Identity = 101/176 (57.39%), Postives = 128/176 (72.73%), Query Frame = 1 Query: 100 AGWIDPDTKDVYMTKKYAVND--RDFELVFSDEFNRDRRTFEDGHDTRWTAMNKNDYTNDALQFYSHDLVTTKNGSLEITTLNKDITFKYFDTPKRRFQTMKKNYISGMVQTWNKFCFTGGVLEVSAKLPGKADVGGLWPAIWLMGNLARATYVDSSDFVWPWSYNQCDRSTPEKR 621 A W+DPDTK ++T + N+ R +ELVFSDEF + R F DG D RWTA+NKNDYTN+AL FYSHD T NG L ITT+ K+ +K F+ ++F KK SGM+Q+WNKFCF GG++E SAKLPG GGLWPA+W++GNLARATYV SSD+VWP+SYNQC+ T + + Sbjct: 27 ASWVDPDTKQAHLTTQPLANEDNRAYELVFSDEFEQAGRKFADGSDPRWTAINKNDYTNEALHFYSHDNAHTSNGVLNITTVEKENVYKAFNEHTKQFYADKKYVQSGMLQSWNKFCFVGGIVEFSAKLPGDPHKGGLWPALWMLGNLARATYVGSSDYVWPFSYNQCNPKTRQSQ 202
BLAST of mRNA_C-tenellus_contig10375.1.1 vs. uniprot
Match: A0A7S1YFE9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1YFE9_9STRA) HSP 1 Score: 211 bits (537), Expect = 2.910e-62 Identity = 100/169 (59.17%), Postives = 123/169 (72.78%), Query Frame = 1 Query: 97 KAGWIDPDTKD-VYMTKKYAVND-RDFELVFSDEFNRDRRTFEDGHDTRWTAMNKNDYTNDALQFYSHDLVTTKNGSLEITTLNKDITFKYFDTPKRRFQTMKKNYISGMVQTWNKFCFTGGVLEVSAKLPGKADVGGLWPAIWLMGNLARATYVDSSDFVWPWSYNQC 597 ++ W+DPDT D Y D R++ELVFSDEF +D RTF DG D RWTA+NKNDYTN AL FYSHD + T NG+L IT+ K T+K FD K+ F KK SGM+Q WNKFC TGG++E +A+LPG GGLWPA+WL+GNLARATYV SSD++WP+SY+QC Sbjct: 63 QSSWVDPDTPDEAYSEAANTETDTREYELVFSDEFEQDGRTFHDGRDPRWTAINKNDYTNAALHFYSHDNIRTNNGTLNITSERKTNTYKAFDEKKKTFYADKKFIQSGMLQGWNKFCMTGGIIEFNARLPGDPFTGGLWPALWLLGNLARATYVGSSDYMWPYSYSQC 231 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig10375.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig10375.1.1 >prot_C-tenellus_contig10375.1.1 ID=prot_C-tenellus_contig10375.1.1|Name=mRNA_C-tenellus_contig10375.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=201bp MAQRWSVMLRIATAVIMLLSWCGRVKAGWIDPDTKDVYMTKKYAVNDRDFback to top mRNA from alignment at C-tenellus_contig10375:217..2130- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig10375.1.1 ID=mRNA_C-tenellus_contig10375.1.1|Name=mRNA_C-tenellus_contig10375.1.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=1914bp|location=Sequence derived from alignment at C-tenellus_contig10375:217..2130- (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig10375:217..2130- >mRNA_C-tenellus_contig10375.1.1 ID=mRNA_C-tenellus_contig10375.1.1|Name=mRNA_C-tenellus_contig10375.1.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=603bp|location=Sequence derived from alignment at C-tenellus_contig10375:217..2130- (Choristocarpus tenellus KU2346)back to top |