mRNA_C-tenellus_contig1025.6.1 (mRNA) Choristocarpus tenellus KU2346

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-tenellus_contig1025.6.1
Unique NamemRNA_C-tenellus_contig1025.6.1
TypemRNA
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Homology
BLAST of mRNA_C-tenellus_contig1025.6.1 vs. uniprot
Match: A0A6H5JPB2_9PHAE (Histone-lysine N-methyltransferase, H3 lysine-79 specific n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JPB2_9PHAE)

HSP 1 Score: 124 bits (311), Expect = 9.260e-32
Identity = 66/132 (50.00%), Postives = 82/132 (62.12%), Query Frame = 1
Query:    1 ELAIYDRLFASHPTSVGKAISKKEREETKQTRGANLVYGEITFEAFVLTLDKIRSVYGRPGVGDSGPEGVLQ-CPGGVFYDLGSGTGKPSLAQSTKDWSTHWNPNNR*INRLPPQVIAAAILHQFDKVVGVE 393
            ++A+YD+LF +HP ++GKAISK ER+ET Q+  + LVYGEITF+   L L K+++ YG PGVG SGP GVLQ   GG FYD+GSGTGKP                          V AAAILH F K VG+E
Sbjct:   96 KMALYDKLFEAHPVAIGKAISKTERDETDQSGNSTLVYGEITFKTLALALHKVKTKYGLPGVGSSGPAGVLQEGSGGAFYDIGSGTGKP--------------------------VFAAAILHPFHKAVGIE 201          
BLAST of mRNA_C-tenellus_contig1025.6.1 vs. uniprot
Match: A0A7S2RS53_9STRA (Histone-lysine N-methyltransferase, H3 lysine-79 specific n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RS53_9STRA)

HSP 1 Score: 114 bits (286), Expect = 4.020e-28
Identity = 62/129 (48.06%), Postives = 79/129 (61.24%), Query Frame = 1
Query:    7 AIYDRLFASHPTSVGKAISKKEREETKQTRGANLVYGEITFEAFVLTLDKIRSVYGRPGVGDSGPEGVLQCPGGVFYDLGSGTGKPSLAQSTKDWSTHWNPNNR*INRLPPQVIAAAILHQFDKVVGVE 393
            AIYD++    PT VGK +SKKER+ET + +  NLVYGEI FE+F +  +KI+S YG PG G +  +GVLQ PGG+FYD+GSGTGKP+                          IAAA+LH F+ V GVE
Sbjct:   72 AIYDQVVEPFPTKVGKHVSKKERDETGKNQ-TNLVYGEINFESFGIAFEKIKSTYGLPGEGTTPVQGVLQAPGGIFYDIGSGTGKPA--------------------------IAAAVLHPFESVGGVE 173          
BLAST of mRNA_C-tenellus_contig1025.6.1 vs. uniprot
Match: A0A482SE85_9ARCH (DOT1 domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SE85_9ARCH)

HSP 1 Score: 107 bits (266), Expect = 7.760e-26
Identity = 58/128 (45.31%), Postives = 73/128 (57.03%), Query Frame = 1
Query:   10 IYDRLFASHPTSVGKAISKKEREETKQTRGANLVYGEITFEAFVLTLDKIRSVYGRPGVGDSGPEGVLQCPGGVFYDLGSGTGKPSLAQSTKDWSTHWNPNNR*INRLPPQVIAAAILHQFDKVVGVE 393
            IYD +  S PT +GKA+SKKEREE    +  NL+YGEI F+   L  +KI+ VYGRP  G SGP G++Q  GG++YDLG+GTGK                           VIA+AILH FD   G+E
Sbjct:   31 IYDSIMQSFPTQLGKAVSKKEREELS-LKDPNLIYGEIVFDTLGLVFEKIKKVYGRPYQGSSGPSGIMQGRGGIYYDLGAGTGKG--------------------------VIASAILHNFDVCYGIE 131          
BLAST of mRNA_C-tenellus_contig1025.6.1 vs. uniprot
Match: A0A836CL60_9STRA (Histone-lysine N-methyltransferase, H3 lysine-79 specific n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CL60_9STRA)

HSP 1 Score: 92.8 bits (229), Expect = 3.140e-20
Identity = 53/128 (41.41%), Postives = 70/128 (54.69%), Query Frame = 1
Query:   10 IYDRLFASHPTSVGKAISKKEREETKQTRGANLVYGEITFEAFVLTLDKIRSVYGRPGVGDSGPEGVLQCPGGVFYDLGSGTGKPSLAQSTKDWSTHWNPNNR*INRLPPQVIAAAILHQFDKVVGVE 393
            ++D++F  HP ++GKAIS+KER+   +   + L YGE+TF+A  + L KIR V+G   V  SG  G LQ PGGVF DLGSGTGK                           VIAAA+ H+F    G+E
Sbjct:   70 LHDKIFIEHPIALGKAISRKERDHLGKAASSTLTYGEVTFDALAVALSKIRHVWGPKAV--SGEAGPLQEPGGVFVDLGSGTGKG--------------------------VIAAALFHRFTACHGIE 169          
BLAST of mRNA_C-tenellus_contig1025.6.1 vs. uniprot
Match: F0XWY6_AURAN (DOT1 domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XWY6_AURAN)

HSP 1 Score: 90.1 bits (222), Expect = 4.940e-19
Identity = 50/102 (49.02%), Postives = 66/102 (64.71%), Query Frame = 1
Query:   10 IYDRLFASHPTSVGKAISKKEREETKQTRGANLVYGEITFEA----------FVLTLDKIRSVYGRPGVGDSGPEGVLQCPG-GVFYDLGSGTGKPSLAQST 282
            +Y+ +F   P + GK ISK+ER+  +    ++LVYGEI F +          F   L KI++VYGRPGVG SG  GV+Q PG GVFYDLGSG GKP++A +T
Sbjct:   51 VYEAIFGRWPATHGKIISKRERD-ARGMNASSLVYGEINFASSGAAKGRDASFGAALLKIKAVYGRPGVGASGDGGVMQAPGSGVFYDLGSGAGKPAVAAAT 151          
BLAST of mRNA_C-tenellus_contig1025.6.1 vs. uniprot
Match: A0A7S2X7Y4_9EUKA (Histone-lysine N-methyltransferase, H3 lysine-79 specific n=1 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2X7Y4_9EUKA)

HSP 1 Score: 86.3 bits (212), Expect = 6.170e-18
Identity = 53/128 (41.41%), Postives = 67/128 (52.34%), Query Frame = 1
Query:   10 IYDRLFASHPTSVGKAISKKEREETKQTRGANLVYGEITFEAFVLTLDKIRSVYGRPGVGDSGPEGVLQCPGGVFYDLGSGTGKPSLAQSTKDWSTHWNPNNR*INRLPPQVIAAAILHQFDKVVGVE 393
            I+D L  + P S+GK  S KER+E K+   + LVYGEI FE + +T++KI+  YG            LQ PGGVFYD+GSGTGKP+ A                          AA+LH FDK  GVE
Sbjct:   42 IWDDLVVTTPVSIGKKASSKERDE-KRLGASTLVYGEIRFEPYGVTIEKIKKWYGG-----------LQKPGGVFYDIGSGTGKPTFA--------------------------AALLHDFDKAYGVE 131          
BLAST of mRNA_C-tenellus_contig1025.6.1 vs. uniprot
Match: A0A7S0DHI4_9EUKA (Histone-lysine N-methyltransferase, H3 lysine-79 specific (Fragment) n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0DHI4_9EUKA)

HSP 1 Score: 85.1 bits (209), Expect = 9.670e-18
Identity = 52/131 (39.69%), Postives = 68/131 (51.91%), Query Frame = 1
Query:    1 ELAIYDRLFASHPTSVGKAISKKEREETKQTRGANLVYGEITFEAFVLTLDKIRSVYGRPGVGDSGPEGVLQCPGGVFYDLGSGTGKPSLAQSTKDWSTHWNPNNR*INRLPPQVIAAAILHQFDKVVGVE 393
            ++ I+D L  + P S+GK  S KER+E KQ   + LVYGEI FE + +T++KI+  YG            L+  GGVFYD+GSGTGKP+ A                          AA+LH FDK  GVE
Sbjct:   43 QMKIWDELVMTTPVSIGKKASSKERDE-KQLGASTLVYGEIRFEPYGITIEKIKKWYGG-----------LKKSGGVFYDIGSGTGKPTFA--------------------------AALLHDFDKACGVE 135          
BLAST of mRNA_C-tenellus_contig1025.6.1 vs. uniprot
Match: A0A2R5GI67_9STRA (Histone-lysine N-methyltransferase, H3 lysine-79 specific n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GI67_9STRA)

HSP 1 Score: 79.3 bits (194), Expect = 4.330e-15
Identity = 46/128 (35.94%), Postives = 66/128 (51.56%), Query Frame = 1
Query:   10 IYDRLFASHPTSVGKAISKKEREETKQTRGANLVYGEITFEAFVLTLDKIRSVYGRPGVGDSGPEGVLQCPGGVFYDLGSGTGKPSLAQSTKDWSTHWNPNNR*INRLPPQVIAAAILHQFDKVVGVE 393
            I+ ++   +P ++GKA+SKKER++       +LVYGEI F  F L L+KIR  YG            L  PGG+F D+GSG+GKP                          V AA ++H+FD+V+G+E
Sbjct:   88 IFKKICGHYPAAIGKAVSKKERQDDALEE-QSLVYGEIQFRTFALALEKIRHKYGG-----------LSEPGGIFVDVGSGSGKP--------------------------VFAAMLMHEFDRVIGIE 177          
BLAST of mRNA_C-tenellus_contig1025.6.1 vs. uniprot
Match: A0A4D9CT00_9STRA (Histone-lysine N-methyltransferase, H3 lysine-79 specific n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CT00_9STRA)

HSP 1 Score: 76.3 bits (186), Expect = 9.310e-14
Identity = 51/138 (36.96%), Postives = 66/138 (47.83%), Query Frame = 1
Query:   37 PTSVGKAISKKEREETKQTRGANLVYGEITFEAFVLTLDKIRSVYGRPGVGDSGPEG------------------VLQCPGG-VFYDLGSGTGKPSLAQSTKDWSTHWNPNNR*INRLPPQVIAAAILHQFDKVVGVE 393
            P SVG+A+S K+R+ + + + ANL YGE+ F +    L++IR  YG+PG  D G  G                  V+Q PGG VFYD+GSGTGKP  A                          AA L  F KVVG+E
Sbjct:   97 PCSVGRALSMKDRDASNE-QDANLTYGEVQFRSMAFILEQIRQKYGKPGRRDQGEGGDKEXXXXXXXXXGEECGGVMQTPGGGVFYDIGSGTGKPCFA--------------------------AAALFPFKKVVGIE 207          
BLAST of mRNA_C-tenellus_contig1025.6.1 vs. uniprot
Match: W2PSX9_PHYPN (Histone-lysine N-methyltransferase, H3 lysine-79 specific n=10 Tax=Phytophthora TaxID=4783 RepID=W2PSX9_PHYPN)

HSP 1 Score: 64.3 bits (155), Expect = 1.180e-9
Identity = 42/128 (32.81%), Postives = 59/128 (46.09%), Query Frame = 1
Query:   10 IYDRLFASHPTSVGKAISKKEREETKQTRGANLVYGEITFEAFVLTLDKIRSVYGRPGVGDSGPEGVLQCPGGVFYDLGSGTGKPSLAQSTKDWSTHWNPNNR*INRLPPQVIAAAILHQFDKVVGVE 393
            I++ L+  HP  V K  S+ ER + ++    +LVYGEI FE F + LD ++  +            VL  PGG+F D+GSG+GK                           V AAA+LH FD   G+E
Sbjct:   66 IFETLYLEHPLKVSKKASRDERRD-REFISMSLVYGEIAFEPFKVVLDVLKRWHH-----------VLNKPGGIFLDIGSGSGKA--------------------------VFAAALLHDFDACYGIE 155          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig1025.6.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JPB2_9PHAE9.260e-3250.00Histone-lysine N-methyltransferase, H3 lysine-79 s... [more]
A0A7S2RS53_9STRA4.020e-2848.06Histone-lysine N-methyltransferase, H3 lysine-79 s... [more]
A0A482SE85_9ARCH7.760e-2645.31DOT1 domain-containing protein n=1 Tax=archaeon Ta... [more]
A0A836CL60_9STRA3.140e-2041.41Histone-lysine N-methyltransferase, H3 lysine-79 s... [more]
F0XWY6_AURAN4.940e-1949.02DOT1 domain-containing protein n=1 Tax=Aureococcus... [more]
A0A7S2X7Y4_9EUKA6.170e-1841.41Histone-lysine N-methyltransferase, H3 lysine-79 s... [more]
A0A7S0DHI4_9EUKA9.670e-1839.69Histone-lysine N-methyltransferase, H3 lysine-79 s... [more]
A0A2R5GI67_9STRA4.330e-1535.94Histone-lysine N-methyltransferase, H3 lysine-79 s... [more]
A0A4D9CT00_9STRA9.310e-1436.96Histone-lysine N-methyltransferase, H3 lysine-79 s... [more]
W2PSX9_PHYPN1.180e-932.81Histone-lysine N-methyltransferase, H3 lysine-79 s... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig1025contigC-tenellus_contig1025:13402..15063 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog2880.D8LS74
PFAMsDOT1
Model size393
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons3
Evalue5.27e-30
EggNOG OGs2BR00@1|root,2S3F7@2759|Eukaryota
DescriptionHistone methylation protein DOT1
Cds size321
COG categoryS
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789123.139071-CDS-C-tenellus_contig1025:13401..134751680789123.139071-CDS-C-tenellus_contig1025:13401..13475Choristocarpus tenellus KU2346CDSC-tenellus_contig1025 13402..13475 +
1680789123.1511877-CDS-C-tenellus_contig1025:14397..145871680789123.1511877-CDS-C-tenellus_contig1025:14397..14587Choristocarpus tenellus KU2346CDSC-tenellus_contig1025 14398..14587 +
1680789123.15994-CDS-C-tenellus_contig1025:14934..149911680789123.15994-CDS-C-tenellus_contig1025:14934..14991Choristocarpus tenellus KU2346CDSC-tenellus_contig1025 14935..14991 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789123.1728225-UTR-C-tenellus_contig1025:14991..150631680789123.1728225-UTR-C-tenellus_contig1025:14991..15063Choristocarpus tenellus KU2346UTRC-tenellus_contig1025 14992..15063 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig1025.6.1prot_C-tenellus_contig1025.6.1Choristocarpus tenellus KU2346polypeptideC-tenellus_contig1025 13402..14991 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-tenellus_contig1025.6.1

>prot_C-tenellus_contig1025.6.1 ID=prot_C-tenellus_contig1025.6.1|Name=mRNA_C-tenellus_contig1025.6.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=107bp
ELAIYDRLFASHPTSVGKAISKKEREETKQTRGANLVYGEITFEAFVLTL
DKIRSVYGRPGVGDSGPEGVLQCPGGVFYDLGSGTGKPSLAQSTKDWSTH
WNPNNR*
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mRNA from alignment at C-tenellus_contig1025:13402..15063+

Legend: CDSpolypeptideUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-tenellus_contig1025.6.1 ID=mRNA_C-tenellus_contig1025.6.1|Name=mRNA_C-tenellus_contig1025.6.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=1662bp|location=Sequence derived from alignment at C-tenellus_contig1025:13402..15063+ (Choristocarpus tenellus KU2346)
GAACTGGCTATCTATGACAGGTTGTTTGCATCACACCCAACGTCTGTGGG CAAGGCCATCTCCAAGAAGGAGAGGTAAGAAAGCTCAGACAACGGCAAAT CCTGAACTCCGACTCAGTCACTATGGACTGACTGGAGTGGTGTGTCTCAG AGAATGACCCAACATAGAAACTTCAGTTCCTGATTTCAAGAAGTTTGGAA TGCCACACATGAATGCAATCAGATACTTGCTTTCCCTCGCCTCCCTCTCC TTAGTTACAAGTCCTTTCCTCAACAGGGACCGGTGAAGCTGCATTACTCC ATAGCTTGGACATGTCCCCCCAGTACCACTGCAGGATAATATTAATAGGG GGCTTATCGCACATCCACCAGAACTTTGATGTTTAATTTTTTCAACGGAG GGCAAATATCTGCACTCACTATATATGCATCTGTACTTGTCCACTTCTCC TTTTTTTCTCTATGTCAGTGTTCGTTGTCTTTACTGGCAACCCCCTCCCA ACCATCTTTTCAACAAATCAAAGTAATGAGAGGTGCCCAAAGTGACTTTT TAAGGATAGGTGCAAGATTCGACTTCTTTTACAAATATGTACAGGATACT TTTTTTCCGAATTGTATCGAAACAATTTCCAAACAACAGAGAAATAGATG CTCTCAAATCAACGTTGGAATCTCGTCTACATAAATACGGGTGAAATTCG AAAGACTGAAAAAAACAGACTTCAAACATGAACCAGTCAAAAAACGACCT GGGTGCCTCTAGTGTACTTTATATCAACGTCTACTGTTTTGCTCTGCTTG ACCCGTCGCCATCGAAGAAAACTTGTGTTGATAACTCTTATCCTCGCGGC CCCCTGTGCTTGCAGGTCTGCCAGTCAAGTTTTCCCATGCCAAGTGTTCA AGGGTGTGTTGTTTTGTTCTCCATCTCTCTCTCTCCACGTGTTGATAATC TTCCGTGTTGCTCATGAGTCTTAACTCTTTTCTTGTGCTCCCCAAGGGAA GAAACCAAGCAAACCCGCGGAGCAAATCTGGTGTACGGAGAGATCACCTT CGAGGCGTTTGTGTTAACCCTTGACAAAATACGATCTGTTTACGGGCGAC CCGGGGTGGGTGACAGCGGGCCGGAGGGTGTTCTGCAGTGCCCTGGAGGC GTGTTTTATGACCTTGGGTCTGGGACAGGGAAACCGGTGAGTAATGTTGT CTTTTTTCATCATAGCAATAGCACCTTTTTTGTTGCTAAGGGGCGGAGAA CACTGAACAATATTTTTTTGTTGACATTAGAGAACAGGTTCTGTGTAACT GTAAGAAGTGTCCTCAGCATACACACACACACACACATGCGCATGCGCAT GCGCATAGCACATATTTGATGCACAGTATGTGCATTTTAATCCATGCACA CGGGCGCATTCTTGAAGTATGTTGCAGTTATGAACAAGTATCCTCAAGCA TGACACAGTAGCATTTAGAGGTGTCCTCTCTCTCTCTCTCTCTCTCTCTC TCTCTCTCTTGTGTCCACCCTCTCTGGTCCCAGTCCCTTGCACAATCAAC CAAGGATTGGTCAACTCATTGGAACCCCAACAATCGATGAATAAACCGAT TGCCGCCGCAGGTCATTGCAGCAGCCATTTTGCATCAGTTCGACAAGGTG GTGGGTGTGGAG
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Coding sequence (CDS) from alignment at C-tenellus_contig1025:13402..15063+

>mRNA_C-tenellus_contig1025.6.1 ID=mRNA_C-tenellus_contig1025.6.1|Name=mRNA_C-tenellus_contig1025.6.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=321bp|location=Sequence derived from alignment at C-tenellus_contig1025:13402..15063+ (Choristocarpus tenellus KU2346)
GAACTGGCTATCTATGACAGGTTGTTTGCATCACACCCAACGTCTGTGGG
CAAGGCCATCTCCAAGAAGGAGAGGGAAGAAACCAAGCAAACCCGCGGAG
CAAATCTGGTGTACGGAGAGATCACCTTCGAGGCGTTTGTGTTAACCCTT
GACAAAATACGATCTGTTTACGGGCGACCCGGGGTGGGTGACAGCGGGCC
GGAGGGTGTTCTGCAGTGCCCTGGAGGCGTGTTTTATGACCTTGGGTCTG
GGACAGGGAAACCGTCCCTTGCACAATCAACCAAGGATTGGTCAACTCAT
TGGAACCCCAACAATCGATGA
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