mRNA_C-tenellus_contig1023.4.1 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig1023.4.1 vs. uniprot
Match: D7G5G5_ECTSI (Serine/threonine-protein kinase Nek3 (NimA-related protein kinase 3) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5G5_ECTSI) HSP 1 Score: 310 bits (794), Expect = 1.350e-90 Identity = 198/449 (44.10%), Postives = 259/449 (57.68%), Query Frame = 1 Query: 67 RKRLFVSFSADVQDSLRWYCSQPSGSLLQNAKRMPSWLRLRDGWTK-EKMTFD----QKAGLLQGCTVELLEREREVLEKRERERRSMFREEQLQRREDEGLRRAVERQPREEQEAGCRKFCKFMDTIERRHSNLSRLRWELTEESDMIQGTTVRLRDAATNRRYICRIMPCQDQDERTNILKELSCIQDIQNPNLVKVKDVYTHHIALYGENGEQTTGQIVIIVLIEHCAGGRLKDQM----GSSSMTLVASQVSSHRKVES---FDTSSEACFTNNQERKSSR--VTPPLECWDPQLLSAVP---------------CCRKLERWVCQVAHALSAMHKEGVVHRNINAGNVYLDERGRAKLGGYQCLKVA-SQWPGLDCFQGGYGYPACTPPEYHLTGIASPEGDIWSLGCALYMWTTGCKFWYLSCGKVRALDNALQQVPCHFGNK 1323 R+R F FS Q Y +P +LL A+ SW RLR+ W + E+ D KA L+ C VE L++ERE E +E ERRSMF +E+ QRR+DE LRRA E P + QE G R FC +DT+ERR L RLRWELT +Q T R+RDAAT +RY+CR++PC+ Q+E +LKE Q+I+NP LVK+ + H IA Y E G QTTG V+++ E CAGG L++ + GSS T A + S R+VE + +E+ +E R P + +VP ++LE WV QVAH LSA+H +G +HRNINA NV+LDERGRAKLGGYQ LK A S + G G+G A PPE+ L G SP+GD+WSLGCALY WTTG +F Y++ G L + L VP +G+K Sbjct: 1044 RRRGFAEFSEQAQAIATRYYDRPRDNLLTAARATASWSRLREVWFQTEENDLDGLDEAKASSLEACVVETLDKERETWELQENERRSMFAQEESQRRDDEALRRAAEAVPCKTQEVGHRAFCALIDTMERRSQALGRLRWELTASLGDMQTMTTRVRDAATGKRYVCRLLPCRSQEEVEFLLKEAYRTQEIRNPYLVKIHSAHPHRIATYDERGVQTTGGKVVLIQAEFCAGGSLQNHLNLLLGSSGETSTAGR-SFDREVERRKVYTPEAESMLKAEEEXXXRRKATNAPSSTANKIAGRSVPWREPLGTRGAAQGGTLSQRLEVWVRQVAHGLSALHADGGMHRNINAQNVFLDERGRAKLGGYQFLKGATSNFAGSLAMHEGFGCAAYAPPEFELRGETSPKGDMWSLGCALYKWTTGKEFAYVAAGA--RLQDTLHLVPPSYGDK 1489
BLAST of mRNA_C-tenellus_contig1023.4.1 vs. uniprot
Match: A0A6H5KDH6_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDH6_9PHAE) HSP 1 Score: 172 bits (435), Expect = 1.740e-46 Identity = 114/296 (38.51%), Postives = 153/296 (51.69%), Query Frame = 1 Query: 508 TVRLRDAATNRRYICRIMPCQDQDERTNILKELSCIQDIQNPNLVKVKDVYTHHIALYGENGEQTTGQIVIIVLIEHCAGGRLKDQM----GSSSMTLVASQVSSHRKVES---FDTSSEACFTNNQERK------------SSRVTPPLECWDPQL-----LSAVPCCRKLERWVCQVAHALSAMHKEGVVHRNINAGNVYLDERGRAKLGGYQCLKVASQWPGLDCFQGGYGYPACTPPEYHLTGIASPEGDIWSLGCALYMWTTGCKFWYLSCGKVRALDNALQQVPCHFGNK 1323 T R+RDAAT +RY+CR++PC+ Q+E +LKE Q+I+NP LVK+ + H IA Y E G QTTG V+++ E CAGG L++ + GSS T A + S R+VE + +E+ +E K ++++ W L ++LE WV QVAH LSA+H +G +HRNINA NV+LDERGRAKLGGYQ LK GD+WSLGCALY WTTG +F S L + L VP +G+K Sbjct: 2 TTRVRDAATGKRYVCRLLPCRSQEEVEFLLKEAYRTQEIRNPYLVKMHSAHPHRIATYDERGVQTTGGEVVLIQAEFCAGGSLQNHLNLLLGSSGETSTAGR-SFDREVERRIVYTPEAESMLKAEEEEKKRQQARNAPSPTANKIAGRSVPWREPLGTGGAAQGGTLSQRLEVWVRQVAHGLSALHADGGMHRNINAQNVFLDERGRAKLGGYQFLK----------------------------------GDVWSLGCALYKWTTGKEF--SSVAASARLQDTLHLVPPSYGDK 260
BLAST of mRNA_C-tenellus_contig1023.4.1 vs. uniprot
Match: A0A7S2SF02_9STRA (Hypothetical protein (Fragment) n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SF02_9STRA) HSP 1 Score: 115 bits (288), Expect = 9.150e-25 Identity = 108/370 (29.19%), Postives = 166/370 (44.86%), Query Frame = 1 Query: 247 CTVELLEREREVLEKRERERRSMFREEQLQRREDEGLRRAVERQPREEQEAGCRKFCKFMDTIERRHSNLSRLRWELT-EESDMIQGTTVRLRDAATNRRYICRIMPCQDQDERTNILKELSCIQDIQNPNLVKVKDVYTHHIALYGENGEQTTGQIV-IIVLIEHCAGGRLKDQMGSSSMTLVASQVSSHRKVESFDTSSEACFTNNQERKSSRVTPPLECWDPQLLSAVPCCRKLERWVCQVAHALSAMHKEGVVHRNINAGNVYLDERGRAKLGGYQCLKVASQWPG-------LDCFQGGYGYPACTPPEYHLTGIASPEGDIWSLGCALYMWTTGCKFWYLSCGKVR--ALDNALQQVPCHFGNK 1323 T + +ER R ++E++ EE+ RR DE RR VE+ R+ QE G R F + + + H ++ RL W+ + + + T ++RD A+ + R+ CQ ++ + ++ ELS QD+ + ++KV +H L G + + G + + V+ C GG+L +Q SH KV+ DT + +W VA L A+H GV HRN+N NV++DERGRA + G+QCLK + + PG DC G G A PE +P DIW+ GC L W T +S G +R LD L+++P FG K Sbjct: 46 ATAQAMERARVMMERQXXXXXXXXXEEEQGRRVDELRRRMVEKPERDFQERGHRLFQQAIARMAYAHPSIRRLHWKRAWVHTSLDESLTAQVRDPASGALRLFRLQICQFDEDTSAMVNELSRWQDVHHYAVMKVHHASCYHSPLVGPSNGENLGDVRGVAVISSFCPGGQLAEQC----------LYDSHPKVKE-DT-------------------------------------MIKWARDVAAGLRALHAAGVTHRNLNPRNVHIDERGRAVICGFQCLK-SPRAPGDPYSMGRNDC--GSLGIMA---PEVDDGHPVAPPSDIWAFGCCLVAWMTSEP--EVSQGVMRNLPLDRILRRIPARFGPK 359
BLAST of mRNA_C-tenellus_contig1023.4.1 vs. uniprot
Match: A0A7S1XIW5_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XIW5_9STRA) HSP 1 Score: 72.0 bits (175), Expect = 1.210e-10 Identity = 46/142 (32.39%), Postives = 67/142 (47.18%), Query Frame = 1 Query: 949 LERWVCQVAHALSAMHKEGVVHRNINAGNVYLDERGRAKLGGYQCLKVASQWPGLDCFQGGYG---YPACTPPEYHL------TGIASPEGDIWSLGCALYMWTTGC--------KFWYLSCGKVRALDNALQQVPCHFGNK 1323 L W V L+A+H+EGV+HRN++ G V+LDE G A++ + C + + D + G + TPPE + +P DIW+ GC LY W TG + Y G+ R D + VP FGN+ Sbjct: 61 LVAWCRSVVKCLAAVHREGVLHRNLHPGAVHLDENGAARVVDFGCFR--NPRANADPYSFGRADVIHAVFTPPELDVGERWRDPEALTPAADIWAFGCCLYRWATGRDIPDTLVDRMQYH--GEKRVRDELIAGVPRRFGNR 198
BLAST of mRNA_C-tenellus_contig1023.4.1 vs. uniprot
Match: A0A0S4JCI5_BODSA (Protein kinase, putative n=1 Tax=Bodo saltans TaxID=75058 RepID=A0A0S4JCI5_BODSA) HSP 1 Score: 70.1 bits (170), Expect = 3.590e-9 Identity = 38/122 (31.15%), Postives = 61/122 (50.00%), Query Frame = 1 Query: 949 LERWVCQVAHALSAMHKEGVVHRNINAGNVYLDERGRAKLGGYQCLKVASQWPGLDCFQGGYGYPACTPPEYHLTGIASPEGDIWSLGCALYMWTTGCKFWYLSCGKVRALDNALQQVPCHF 1314 ++++ + HALS +HKEG++HR+I N+ + G+ KL + C K ++ C G P PE+ + G +P+ DIW+ GC L+ TG W+ R DN +P F Sbjct: 226 IKKFSVDMLHALSFIHKEGIIHRDIKPANILVSAHGQVKLADFGCSKRITELTTTGCI---IGTPVYMAPEF-IRGETTPKCDIWATGCTLFELATGLTPWH----HARVRDN----IPLMF 335
BLAST of mRNA_C-tenellus_contig1023.4.1 vs. uniprot
Match: A0A7W1TAJ5_9BACT (Non-specific serine/threonine protein kinase n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A7W1TAJ5_9BACT) HSP 1 Score: 68.6 bits (166), Expect = 1.030e-8 Identity = 39/93 (41.94%), Postives = 55/93 (59.14%), Query Frame = 1 Query: 973 AHALSAMHKEGVVHRNINAGNVYLDERGRAKLG--GYQCLKVASQWPGLDCFQGGYGYPACTPPEYHLTGIASPE--GDIWSLGCALYMWTTG 1239 A L+A+H+ G+VHR+I N+ LD G AKLG G C + G + + G PA PPE +TG+++P+ GDI+SLG +Y W TG Sbjct: 138 AKGLAAIHRIGLVHRDIKPSNILLDAAGNAKLGDFGLACFREVD---GKEPSRTEVGTPAYMPPE-SITGVSAPDIRGDIYSLGVTMYYWATG 226
BLAST of mRNA_C-tenellus_contig1023.4.1 vs. uniprot
Match: E9FVU5_DAPPU (Protein kinase domain-containing protein n=2 Tax=Daphnia TaxID=6668 RepID=E9FVU5_DAPPU) HSP 1 Score: 63.2 bits (152), Expect = 2.020e-7 Identity = 36/107 (33.64%), Postives = 55/107 (51.40%), Query Frame = 1 Query: 949 LERWVCQVAHALSAMHKEGVVHRNINAGNVYLDERGRA-KLGGYQCL-KVASQWPGLDCFQGGYGYPACTPPEYHLTGIASPEG---DIWSLGCALYMWTTGCKFWY 1254 + R+ Q+ A++ +H+ G+VHR+I N++L + G KLG + C K+ SQ QG G A PE + + G DIWS+GC + TG + WY Sbjct: 104 IRRFTRQLLEAVTVLHENGIVHRDIKGANIFLTDVGNCLKLGDFGCAAKIKSQTTMFGELQGFVGTQAFMAPEVFMHTMTEGHGRAADIWSVGCVVIEMATGKRPWY 210
BLAST of mRNA_C-tenellus_contig1023.4.1 vs. uniprot
Match: UPI000BA81087 (mitogen-activated protein kinase kinase kinase 4-like n=1 Tax=Limulus polyphemus TaxID=6850 RepID=UPI000BA81087) HSP 1 Score: 61.2 bits (147), Expect = 2.740e-7 Identity = 35/108 (32.41%), Postives = 55/108 (50.93%), Query Frame = 1 Query: 949 LERWVCQVAHALSAMHKEGVVHRNINAGNVYLDERGRAKLGGYQC---LKVASQWPGLDCFQGGYGYPACTPPEYHLTGIASPEG---DIWSLGCALYMWTTGCKFWY 1254 + ++ Q+ A+S +H+ G+VHR+I + N++L G KLG + C L + PG C G G PA PE I G DIWS+GC + ++ + W+ Sbjct: 26 VRKYTRQLLEAVSVLHENGIVHRDIKSANIFLSSNGVLKLGDFGCCIKLMNHTTMPGELC--GLVGTPAYMAPEVFTRNITEGHGRAADIWSVGCVVLEMSSARRPWH 131
BLAST of mRNA_C-tenellus_contig1023.4.1 vs. uniprot
Match: UPI001EDDDE86 (mitogen-activated protein kinase kinase kinase 4-like isoform X1 n=4 Tax=Daphnia TaxID=6668 RepID=UPI001EDDDE86) HSP 1 Score: 63.2 bits (152), Expect = 7.610e-7 Identity = 36/107 (33.64%), Postives = 55/107 (51.40%), Query Frame = 1 Query: 949 LERWVCQVAHALSAMHKEGVVHRNINAGNVYLDERGRA-KLGGYQCL-KVASQWPGLDCFQGGYGYPACTPPEYHLTGIASPEG---DIWSLGCALYMWTTGCKFWY 1254 + R+ Q+ A++ +H+ G+VHR+I N++L + G KLG + C K+ SQ QG G A PE + + G DIWS+GC + TG + WY Sbjct: 1387 IRRFTRQLLEAVTVLHENGIVHRDIKGANIFLTDVGNCLKLGDFGCAAKIKSQTTMFGELQGFVGTQAFMAPEVFMHTMTEGHGRAADIWSVGCVVIEMATGKRPWY 1493
BLAST of mRNA_C-tenellus_contig1023.4.1 vs. uniprot
Match: A0A164NK54_9CRUS (Mekk1 n=2 Tax=Daphnia magna TaxID=35525 RepID=A0A164NK54_9CRUS) HSP 1 Score: 63.2 bits (152), Expect = 7.620e-7 Identity = 36/107 (33.64%), Postives = 55/107 (51.40%), Query Frame = 1 Query: 949 LERWVCQVAHALSAMHKEGVVHRNINAGNVYLDERGRA-KLGGYQCL-KVASQWPGLDCFQGGYGYPACTPPEYHLTGIASPEG---DIWSLGCALYMWTTGCKFWY 1254 + R+ Q+ A++ +H+ G+VHR+I N++L + G KLG + C K+ SQ QG G A PE + + G DIWS+GC + TG + WY Sbjct: 1393 IRRFTRQLLEAVTVLHENGIVHRDIKGANIFLTDVGNCLKLGDFGCAAKIKSQTTMFGELQGFVGTQAFMAPEVFMHTMTEGHGRAADIWSVGCVVIEMATGKRPWY 1499 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig1023.4.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig1023.4.1 >prot_C-tenellus_contig1023.4.1 ID=prot_C-tenellus_contig1023.4.1|Name=mRNA_C-tenellus_contig1023.4.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=431bp MMQKYTQPQDGKRKRLFVSFSADVQDSLRWYCSQPSGSLLQNAKRMPSWLback to top mRNA from alignment at C-tenellus_contig1023:9200..14248+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig1023.4.1 ID=mRNA_C-tenellus_contig1023.4.1|Name=mRNA_C-tenellus_contig1023.4.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=5049bp|location=Sequence derived from alignment at C-tenellus_contig1023:9200..14248+ (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig1023:9200..14248+ >mRNA_C-tenellus_contig1023.4.1 ID=mRNA_C-tenellus_contig1023.4.1|Name=mRNA_C-tenellus_contig1023.4.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=1293bp|location=Sequence derived from alignment at C-tenellus_contig1023:9200..14248+ (Choristocarpus tenellus KU2346)back to top |