mRNA_C-tenellus_contig10228.1.2 (mRNA) Choristocarpus tenellus KU2346

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-tenellus_contig10228.1.2
Unique NamemRNA_C-tenellus_contig10228.1.2
TypemRNA
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Homology
BLAST of mRNA_C-tenellus_contig10228.1.2 vs. uniprot
Match: D8LCI4_ECTSI (Rhodanese domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCI4_ECTSI)

HSP 1 Score: 238 bits (608), Expect = 5.970e-73
Identity = 118/180 (65.56%), Postives = 144/180 (80.00%), Query Frame = 3
Query:  312 QVKTGMTVDKLKFVTTRQHLRRRDESYFRLTPGQLYELFAEYELNSREDVQDFCDHRDPDSHGPRIVVHDSEAEPEYERPYLILDLRTPAEFEANHIMQARGFEAKLLNQDRMTSELYRYKNKEGGLIILYGEEERVACQAATTLIHRGFDNIFVLSGGLTGFAR-AFPAFVEGKIKLSP 848
            +V+TGMTVDK+ FVTTRQHLRRR+E YFRLTP QL EL +EYE + +E VQDF DH DPD HGP++V ++ +A+P Y+RPYL+LD+R+P EF+   I+QAR FEAKLLNQDRMT ELY YKN+EGGL+ILY  ++  A  AA TLIHRGFDNIFVLSGGL  FAR  F +FVEG ++  P
Sbjct:   33 KVQTGMTVDKVTFVTTRQHLRRREEPYFRLTPSQLNELLSEYEQDQQEGVQDFRDHIDPDHHGPKVVEYEPDAKPSYDRPYLVLDVRSPEEFKRCRIVQARSFEAKLLNQDRMTPELYMYKNREGGLVILYSNDDADAGHAARTLIHRGFDNIFVLSGGLVAFAREGFQSFVEGDVEALP 212          
BLAST of mRNA_C-tenellus_contig10228.1.2 vs. uniprot
Match: A0A6H5JFI4_9PHAE (Rhodanese domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFI4_9PHAE)

HSP 1 Score: 236 bits (603), Expect = 1.330e-70
Identity = 116/175 (66.29%), Postives = 139/175 (79.43%), Query Frame = 3
Query:  327 MTVDKLKFVTTRQHLRRRDESYFRLTPGQLYELFAEYELNSREDVQDFCDHRDPDSHGPRIVVHDSEAEPEYERPYLILDLRTPAEFEANHIMQARGFEAKLLNQDRMTSELYRYKNKEGGLIILYGEEERVACQAATTLIHRGFDNIFVLSGGLTGFAR-AFPAFVEGKIKLSP 848
            MTVDK+ FVTTRQHLRRR+E YFRLTP QL EL +EYE + +E V DF DH DPD HGP++V ++ +A+P Y+RPYL+LD+RTP EF+   I+QAR FEAKLLNQDRMT ELY YKN+EGGL+ILY  ++  AC AA TLIHRGFDNIFVLSGGL  FAR  F +FVEG ++  P
Sbjct:    1 MTVDKVTFVTTRQHLRRREEPYFRLTPSQLNELLSEYEQDQQEGVHDFRDHIDPDHHGPKVVEYEPDAKPSYDRPYLVLDVRTPEEFKRCRIVQARSFEAKLLNQDRMTPELYMYKNREGGLVILYSNDDADACHAARTLIHRGFDNIFVLSGGLVAFAREGFQSFVEGNVEALP 175          
BLAST of mRNA_C-tenellus_contig10228.1.2 vs. uniprot
Match: A0A835ZB11_9STRA (Rhodanese-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZB11_9STRA)

HSP 1 Score: 223 bits (568), Expect = 2.260e-66
Identity = 107/186 (57.53%), Postives = 142/186 (76.34%), Query Frame = 3
Query:  321 TGMTVDKLKFVTTRQHLRRRDESYFRLTPGQLYELFAEYELNSREDVQDFCDHRDPDSHGPRIVVHDSEAEPEYERPYLILDLRTPAEFEANHIMQARGFEAKLLNQDRMTSELYRYKNKEGGLIILYGEEERVACQAATTLIHRGFDNIFVLSGGLTGFARAFPAFVEGK--IKLSPRGSQDRSS 872
            TG+TVDK+K+VT ++ LRRRDE Y+R+TPGQL++L +EYE + +E VQD    +DPDSHGP +V +  EAE  Y+RPYLILDLRTP E+  + + QAR F   +LNQDRMT+EL+++KN+EG LI+LY +EER+ACQAA TL+HRGFDN++VLSGGL  F    P F+EG   +  S +G+  RSS
Sbjct:   20 TGLTVDKVKYVTAKEFLRRRDEPYYRVTPGQLFDLLSEYEQDLQEGVQDMASKQDPDSHGPVVVTYTEEAEAAYDRPYLILDLRTPEEYTVHRVAQARSFPIVMLNQDRMTAELFKFKNREGTLIVLYEDEERLACQAAQTLLHRGFDNVYVLSGGLQAFTHLHPDFIEGTPPVPKSQKGTARRSS 205          
BLAST of mRNA_C-tenellus_contig10228.1.2 vs. uniprot
Match: A0A7S2V7G5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V7G5_9STRA)

HSP 1 Score: 185 bits (470), Expect = 9.280e-53
Identity = 94/189 (49.74%), Postives = 135/189 (71.43%), Query Frame = 3
Query:  312 QVKTGMTVDKLKFVTTRQHLRRRDESYFRLTPGQLYELFAEYELNSREDVQDFCDHRDPDSHGPRIVVHDSEAEPEYERPYLILDLRTPAEFEANHIMQARGFEAKLLNQDRMTSELYRYKNKEGGLIILYGEEERVACQAATTLIHRGFDNIFVLSGGLTGFARAFPAFVEGKIKLSPRGSQDRSSNR 878
            ++ TGMTVDK+K+++T ++L+RR+E +FRL+  QL+ LFAEYE +  EDV++   ++     GPR+V  +++ +P Y+RPYL+LDLRT  E+   HIMQAR F  ++LNQD+M ++LY+YKNKEG LI+LY + E ++ QA  TL+ RGFDNIF+L+GGL  F+   P +VEG     PR    R SNR
Sbjct:   28 RIDTGMTVDKVKYISTSEYLKRRNELFFRLSSNQLHALFAEYEAD-HEDVEE---NKGGGFDGPRVVTIEADEKPSYQRPYLLLDLRTQQEYTQCHIMQARSFPMQMLNQDKMIADLYQYKNKEGQLIVLYCDNEAISSQAGHTLVTRGFDNIFLLTGGLFTFSELHPLYVEGTPPERPRNDNSRGSNR 212          
BLAST of mRNA_C-tenellus_contig10228.1.2 vs. uniprot
Match: A0A482S3N9_9ARCH (Rhodanese-like domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482S3N9_9ARCH)

HSP 1 Score: 154 bits (389), Expect = 4.570e-40
Identity = 79/172 (45.93%), Postives = 118/172 (68.60%), Query Frame = 3
Query:  321 TGMTVDKLKFVTTRQHLRRRDESYFRLTPGQLYELFAEYELNSREDVQDFCDHRDPDSHGPRIVVHDSEAEPEYERPYLILDLRTPAEFEANHIMQARGFEAKLLNQDRMTSELYRYKNKEGGLIILYGEEERVACQAATTLIHRGFDNIFVLSGGLTGFARAFPAFVEGKI 836
            TG+TV+K+K VT R++ +RRDE +FR+T  QLYEL++EYE +  E + +       DS  PR+V +  E +P Y +PYLILD+R   ++   H++QAR F   LL +D+   E+YR++NKE  LIILY  +E+++ +AA  ++ RG DNI++LSGGL  FA  + AFVEG++
Sbjct:   20 TGVTVNKVKHVTAREYAKRRDEIFFRITRHQLYELYSEYEQDEYETISET---HAVDSK-PRVVTYHEEDKPVYTKPYLILDMRDTNDYNTCHLLQARSFPDTLLRRDQYHPEIYRFRNKEEHLIILYCNDEKISQEAAAVMVTRGIDNIYLLSGGLAQFAADYSAFVEGEV 187          
BLAST of mRNA_C-tenellus_contig10228.1.2 vs. uniprot
Match: A0A7S3HNL5_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HNL5_9STRA)

HSP 1 Score: 146 bits (369), Expect = 1.260e-36
Identity = 71/177 (40.11%), Postives = 118/177 (66.67%), Query Frame = 3
Query:  321 TGMTVDKLKFVTTRQHLRRRDESYFRLTPGQLYELFAEYELNSREDVQDFCDHRDPDSHGPRIVVHDSEAEPEYERPYLILDLRTPAEFEANHIMQARGFEAKLLNQDRMTSELYRYKNKEGGLIILYGEEERVACQAATTLIHRGFDNIFVLSGGLTGFARAFPAFVEGKIKLSPR 851
            TG+TV+K+KF+T R++ +RRDE ++R+   QL+EL  EYE++  E + +        ++  +IV +   A P YE+PYLILD+R    F   HI+QAR F  ++L +D+M SE+YR+KNK   LII+  ++E+++ ++A  ++ RG DN+++L+GG+  FA  +P F+EG+    P+
Sbjct:   32 TGLTVEKVKFITAREYSKRRDEIFYRINKNQLFELLNEYEVDEYESIAETT------NNSLKIVSYSETAGPVYEKPYLILDVRELDYFNEYHILQARSFPYQMLRRDQMHSEVYRFKNKPETLIIICCDDEKISHESAKVMVDRGVDNVYLLTGGIHEFAYEYPQFIEGRPPAPPK 202          
BLAST of mRNA_C-tenellus_contig10228.1.2 vs. uniprot
Match: K3WIU3_GLOUD (Rhodanese domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WIU3_GLOUD)

HSP 1 Score: 140 bits (353), Expect = 9.340e-35
Identity = 81/194 (41.75%), Postives = 118/194 (60.82%), Query Frame = 3
Query:  312 QVKTGMTVDKLKFVTTRQHLRRRDESYFRLTPGQLYELFAEYELNS---------------REDVQDFCDHRDP------DSHGPRIVVHDSEAEPEYERPYLILDLRTPAEFEANHIMQARGFEAKLLNQDRMTSELYRYKNKEGGLIILYGEEERVACQAATTLIHRGFDNIFVLSGGLTGFARAFPAFVEG 830
            ++ TG TV+K++ ++T++ L+RRDE++ R+T   L ELF EYE                  ++D   F   R P       + GPRIV +++E + EY+ PYLILD RT  EF AN I +A+ F A  L +D +  E++R+KN+E  LIILY  +E+   Q A TL+ RGFDNI+VL+GGL  +A A+P  +EG
Sbjct:   29 KIDTGATVNKVRLISTKEFLKRRDETFRRVTCACLAELFNEYEDGGGDSAGGQPEMVARMVKKDDGKFVMERVPAEDNQSSAGGPRIVSYNAEEQEEYDPPYLILDTRTKEEFAANRIHRAKSFPASYLCRDMLLPEMHRFKNQESKLIILYDLDEKTVPQTAHTLVQRGFDNIYVLTGGLIDYADAYPDHIEG 222          
BLAST of mRNA_C-tenellus_contig10228.1.2 vs. uniprot
Match: A0A2D4CAV7_PYTIN (Rhodanese domain-containing protein n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CAV7_PYTIN)

HSP 1 Score: 139 bits (351), Expect = 1.850e-34
Identity = 84/212 (39.62%), Postives = 123/212 (58.02%), Query Frame = 3
Query:  270 MARKYVVQPLPSMKQVK--TGMTVDKLKFVTTRQHLRRRDESYFRLTPGQLYELFAEYELNS-----------------REDVQ------DFCDHRDPDSHGPRIVVHDSEAEPEYERPYLILDLRTPAEFEANHIMQARGFEAKLLNQDRMTSELYRYKNKEGGLIILYGEEERVACQAATTLIHRGFDNIFVLSGGLTGFARAFPAFVEG 830
            M +K  V P  +  Q K  +G TV+K++ ++ ++ L+RRDE++ R+T   L  L AEYE N                  +ED +         D++  ++ GPR+V +D+E   EY+ PYLILD R   EF  N I +A+ F A  LN+D +  E+Y++KN+E  LIILY ++E+   Q A TL+ RGFDNI+VL+GGL  FA  FP  +EG
Sbjct:   13 MEKKIPVNPKYANTQSKIDSGTTVNKVRLISHKEFLKRRDETFRRVTVKCLEALLAEYEDNGGCGXGCEEPEMVARMVKKEDGKFELQRVPADDNQSHNASGPRVVSYDAEEREEYDPPYLILDTRPKEEFAVNRITRAKSFPAAFLNRDTLLPEMYKFKNQESKLIILYDQDEKTVTQTAHTLVQRGFDNIYVLTGGLVDFADEFPDRIEG 224          
BLAST of mRNA_C-tenellus_contig10228.1.2 vs. uniprot
Match: A0A7S3XJW4_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XJW4_HETAK)

HSP 1 Score: 132 bits (331), Expect = 2.390e-33
Identity = 67/148 (45.27%), Postives = 97/148 (65.54%), Query Frame = 3
Query:  423 LFAEYELNSREDVQDFCDHRDPDSHGPRIVVHDSEAEPEYERPYLILDLRTPAEFEANHIMQARGFEAKLLNQDRMTSELYRYKNKEGGLIILYGEEERVACQAATTLIHRGFDNIFVLSGGLTGFARAFPAFVEGKIKLSPRGSQDR 866
            LFAEYE++  E+V +     D    GPR+V  +++ +P+Y+RPY+I DLR   E+   HI+QAR    +LLNQD+M++E+Y++KNK+G LIILY  +  +  QAA  +  RGFDNI++LSGGL  F+   P +VEG   + P   Q R
Sbjct:    2 LFAEYEVDGHEEVHENTGGWD----GPRMVTIEADEKPQYQRPYIIFDLREIDEYRQCHILQARNHPFRLLNQDKMSAEMYQFKNKDGHLIILYDNDTSIVQQAAHVMCTRGFDNIYILSGGLYAFSERHPQYVEGVPPVRPASQQAR 145          
BLAST of mRNA_C-tenellus_contig10228.1.2 vs. uniprot
Match: A0A662Y6U1_9STRA (Rhodanese domain-containing protein (Fragment) n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662Y6U1_9STRA)

HSP 1 Score: 137 bits (345), Expect = 2.520e-33
Identity = 76/193 (39.38%), Postives = 117/193 (60.62%), Query Frame = 3
Query:  312 QVKTGMTVDKLKFVTTRQHLRRRDESYFRLTPGQLYELFAEYELN--------------------SREDVQDFCDHRDPDSHGPRIVVHDSEAEPEYERPYLILDLRTPAEFEANHIMQARGFEAKLLNQDRMTSELYRYKNKEGGLIILYGEEERVACQAATTLIHRGFDNIFVLSGGLTGFARAFPAFVEG 830
            +V +G TV+K++ ++ ++ L+RRDE++ R+T   L ELF EYE                      + E V    D+   +S GPRIV +D+E + +Y+ PYL+LD RT  E+ AN I +A+ F A  LN+D +  E++++KN E  LII+Y ++++ A Q A  L+ RGFDN++VLSGGL  +A  FP  +EG
Sbjct:   57 KVDSGSTVNKVRLISHKEFLKRRDETFRRVTCRCLAELFNEYEDTGSASRPEMVARMVKGANGEFTMERVPASEDNNSEESCGPRIVSYDAEEKEDYDPPYLVLDTRTKEEYAANRIHRAKSFPASYLNRDVLLPEMHQFKNNEAKLIIIYDQDDKTAGQTAHILVQRGFDNVYVLSGGLVDYADEFPDHIEG 249          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig10228.1.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LCI4_ECTSI5.970e-7365.56Rhodanese domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5JFI4_9PHAE1.330e-7066.29Rhodanese domain-containing protein n=1 Tax=Ectoca... [more]
A0A835ZB11_9STRA2.260e-6657.53Rhodanese-like domain-containing protein n=1 Tax=T... [more]
A0A7S2V7G5_9STRA9.280e-5349.74Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
A0A482S3N9_9ARCH4.570e-4045.93Rhodanese-like domain-containing protein n=1 Tax=a... [more]
A0A7S3HNL5_9STRA1.260e-3640.11Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
K3WIU3_GLOUD9.340e-3541.75Rhodanese domain-containing protein n=1 Tax=Globis... [more]
A0A2D4CAV7_PYTIN1.850e-3439.62Rhodanese domain-containing protein n=2 Tax=Pythiu... [more]
A0A7S3XJW4_HETAK2.390e-3345.27Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A662Y6U1_9STRA2.520e-3339.38Rhodanese domain-containing protein (Fragment) n=2... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig10228contigC-tenellus_contig10228:27..1861 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog2880.D8LCI4
Preferred nameCEP41
PFAMsRhodanese
Model size1300
Max annot lvl2759|Eukaryota
KEGG koko:K16455
Hectar predicted targeting categoryother localisation
GOsGO:0000086,GO:0000226,GO:0000278,GO:0001578,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005813,GO:0005814,GO:0005815,GO:0005829,GO:0005856,GO:0005929,GO:0006464,GO:0006807,GO:0006996,GO:0007010,GO:0007017,GO:0007049,GO:0007346,GO:0008150,GO:0008152,GO:0009987,GO:0010389,GO:0010564,GO:0015630,GO:0016043,GO:0016874,GO:0016879,GO:0016881,GO:0018095,GO:0018193,GO:0018200,GO:0019538,GO:0022402,GO:0022406,GO:0022607,GO:0030030,GO:0030031,GO:0035082,GO:0036064,GO:0036211,GO:0042995,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043412,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044430,GO:0044441,GO:0044444,GO:0044446,GO:0044450,GO:0044463,GO:0044464,GO:0044770,GO:0044772,GO:0044782,GO:0044839,GO:0050789,GO:0050794,GO:0051179,GO:0051640,GO:0051641,GO:0051726,GO:0060271,GO:0065007,GO:0070739,GO:0070740,GO:0070925,GO:0071704,GO:0071840,GO:0097711,GO:0120025,GO:0120031,GO:0120036,GO:0120038,GO:0140056,GO:0140096,GO:1901564,GO:1901987,GO:1901990,GO:1902749,GO:1903047
Exons3
Evalue6.24e-75
EggNOG OGs28IWM@1|root,2QR8A@2759|Eukaryota
Ec32 ortholog descriptionRhodanese-like domain
Ec32 orthologEc-26_005150.1
Descriptionprotein polyglutamylation
Cds size1029
COG categoryS
BRITEko00000,ko03036
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789122.0692194-CDS-C-tenellus_contig10228:26..5931680789122.0692194-CDS-C-tenellus_contig10228:26..593Choristocarpus tenellus KU2346CDSC-tenellus_contig10228 27..593 -
1680789122.0798569-CDS-C-tenellus_contig10228:926..12141680789122.0798569-CDS-C-tenellus_contig10228:926..1214Choristocarpus tenellus KU2346CDSC-tenellus_contig10228 927..1214 -
1680789122.0893018-CDS-C-tenellus_contig10228:1418..15921680789122.0893018-CDS-C-tenellus_contig10228:1418..1592Choristocarpus tenellus KU2346CDSC-tenellus_contig10228 1419..1592 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789122.1059847-UTR-C-tenellus_contig10228:1592..18611680789122.1059847-UTR-C-tenellus_contig10228:1592..1861Choristocarpus tenellus KU2346UTRC-tenellus_contig10228 1593..1861 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig10228.1.2prot_C-tenellus_contig10228.1.2Choristocarpus tenellus KU2346polypeptideC-tenellus_contig10228 27..1592 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-tenellus_contig10228.1.2

>prot_C-tenellus_contig10228.1.2 ID=prot_C-tenellus_contig10228.1.2|Name=mRNA_C-tenellus_contig10228.1.2|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=343bp
MARKYVVQPLPSMKQVKTGMTVDKLKFVTTRQHLRRRDESYFRLTPGQLY
ELFAEYELNSREDVQDFCDHRDPDSHGPRIVVHDSEAEPEYERPYLILDL
RTPAEFEANHIMQARGFEAKLLNQDRMTSELYRYKNKEGGLIILYGEEER
VACQAATTLIHRGFDNIFVLSGGLTGFARAFPAFVEGKIKLSPRGSQDRS
SNRGDGDRHHEARTQGSVPGTKVHLREHIQSRPGDCLPGMTSSFNLPTHR
SSNRSRTSPASSRGGDSSRYGATGDGHPYHGDMGSSGGGRVSQLAGERTS
TSQSVTGSRSMRGRIVNVGDHVKERALVPSVASARWRIRGDGG
back to top

mRNA from alignment at C-tenellus_contig10228:27..1861-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-tenellus_contig10228.1.2 ID=mRNA_C-tenellus_contig10228.1.2|Name=mRNA_C-tenellus_contig10228.1.2|organism=Choristocarpus tenellus KU2346|type=mRNA|length=1835bp|location=Sequence derived from alignment at C-tenellus_contig10228:27..1861- (Choristocarpus tenellus KU2346)
GCAAGCCTTATCCACACGAAACAGTCCCTTGGAGAAAAGAGTACCCCTGA ACCCCCGCTATGCCGGCATTCAGAGCAAGGTGAACATATACGACTGGAGC CAACTACCCCAGACATCCAAGTCGAAAATAGTCTTCTGAAAGCGCATCTT TGACGCGTGTAGCTGTTCTTAAAAAGTGGATTCTCTGTTAAATATGCACT CTGTCGTTTTCCATTGCTGCGAAAGCTCCTCGTCTTGCTAGCAACAAAGT TCTCTCACTATCTTACAAAATGGCTAGGAAATATGTAGTCCAACCTCTCC CCTCCATGAAACAGGTGAAAACAGGAATGACAGTGGACAAGCTCAAGTTT GTTACCACAAGGCAACACCTACGACGGAGGGATGAATCATACTTCAGATT GACCCCTGGACAGCTATACGAACTGTTCGCTGAGTACGAGCTGGTGAGTC AATGGGTGATTGTTGTCAATAACATTACTCTTGATTTTTCCTTGTCAACC GATATCGAGTGAAGGCAAACGAATTCTCCAATTTCAATTCTCCAATTTCC ATCGCCTTTTCCTAACTGGTCACCTCCATCCAAGCCCTTCCTCGGGCCCT AGCGGTATTCGGCCCGAGCTTCCTGATTTCACCCTTGGCCTCTACAGAAC TCACGAGAAGACGTTCAGGATTTCTGTGACCATCGCGACCCCGACAGCCA CGGCCCTCGCATTGTAGTCCACGATTCCGAAGCGGAGCCAGAGTATGAAA GGCCATACCTCATCCTCGACTTGCGGACACCTGCTGAGTTCGAGGCTAAT CACATCATGCAAGCACGGGGATTCGAGGCTAAGCTCCTGAATCAGGACCG TATGACCTCTGAGCTATACAGATACAAGAACAAGGAAGGGGGTCTCATTA TTCTCTATGGTGAAGAAGAGAGGGTTGCTTGCCAGGCAAGTCACATGCCA ATAGGACCACACAGTTGCAGACCCTGCCGTTGTGGGGAATAGGAGGTATA TTTCTTCACATCTTGTTCCCCTTGACCTCTACTGTGTGGTGGAATGAATC GATTCAATGGACACCTATACAAAAAATGGCCTCGTGAAGGATGATCCGGA CAAGCAGATCGAAATCATCCAACCCTGATATATTTGCACACTAAAAAACT TGCCTTACGCTCCATTGTCTCATGCTTCCCAAGACATCTCACGGCTATGT TCACGCTCTTTCCCTGACCTGCTTCCATACCTTTCCTCTCATTCTTCCCC CTGTCCCCTTGCAAGCAGGCGGCAACAACTCTCATTCACCGAGGATTTGA CAACATTTTTGTGTTATCAGGTGGCCTTACAGGTTTTGCAAGAGCATTCC CTGCGTTTGTTGAGGGGAAAATCAAACTGTCTCCCAGAGGGTCCCAGGAT CGCAGCAGCAACCGTGGTGATGGCGACAGACATCATGAGGCAAGAACACA AGGATCAGTGCCAGGGACTAAGGTACATTTGAGGGAACATATCCAGAGCC GTCCTGGCGACTGTCTTCCAGGGATGACATCATCATTCAACCTTCCCACT CACCGCTCATCTAATAGAAGTAGGACATCACCAGCATCTAGCCGAGGTGG GGACAGCAGCAGGTATGGTGCTACAGGAGATGGGCACCCATACCACGGAG ACATGGGCAGCAGTGGTGGAGGGAGAGTCAGCCAATTGGCTGGGGAAAGA ACGTCAACCAGTCAGAGTGTAACGGGTTCGAGGAGCATGAGAGGGAGGAT AGTCAATGTCGGCGACCACGTAAAGGAGCGTGCTCTAGTTCCATCTGTAG CATCTGCTCGCTGGCGAATTCGTGGTGATGGTGGG
back to top

Coding sequence (CDS) from alignment at C-tenellus_contig10228:27..1861-

>mRNA_C-tenellus_contig10228.1.2 ID=mRNA_C-tenellus_contig10228.1.2|Name=mRNA_C-tenellus_contig10228.1.2|organism=Choristocarpus tenellus KU2346|type=CDS|length=1029bp|location=Sequence derived from alignment at C-tenellus_contig10228:27..1861- (Choristocarpus tenellus KU2346)
ATGGCTAGGAAATATGTAGTCCAACCTCTCCCCTCCATGAAACAGGTGAA
AACAGGAATGACAGTGGACAAGCTCAAGTTTGTTACCACAAGGCAACACC
TACGACGGAGGGATGAATCATACTTCAGATTGACCCCTGGACAGCTATAC
GAACTGTTCGCTGAGTACGAGCTGAACTCACGAGAAGACGTTCAGGATTT
CTGTGACCATCGCGACCCCGACAGCCACGGCCCTCGCATTGTAGTCCACG
ATTCCGAAGCGGAGCCAGAGTATGAAAGGCCATACCTCATCCTCGACTTG
CGGACACCTGCTGAGTTCGAGGCTAATCACATCATGCAAGCACGGGGATT
CGAGGCTAAGCTCCTGAATCAGGACCGTATGACCTCTGAGCTATACAGAT
ACAAGAACAAGGAAGGGGGTCTCATTATTCTCTATGGTGAAGAAGAGAGG
GTTGCTTGCCAGGCGGCAACAACTCTCATTCACCGAGGATTTGACAACAT
TTTTGTGTTATCAGGTGGCCTTACAGGTTTTGCAAGAGCATTCCCTGCGT
TTGTTGAGGGGAAAATCAAACTGTCTCCCAGAGGGTCCCAGGATCGCAGC
AGCAACCGTGGTGATGGCGACAGACATCATGAGGCAAGAACACAAGGATC
AGTGCCAGGGACTAAGGTACATTTGAGGGAACATATCCAGAGCCGTCCTG
GCGACTGTCTTCCAGGGATGACATCATCATTCAACCTTCCCACTCACCGC
TCATCTAATAGAAGTAGGACATCACCAGCATCTAGCCGAGGTGGGGACAG
CAGCAGGTATGGTGCTACAGGAGATGGGCACCCATACCACGGAGACATGG
GCAGCAGTGGTGGAGGGAGAGTCAGCCAATTGGCTGGGGAAAGAACGTCA
ACCAGTCAGAGTGTAACGGGTTCGAGGAGCATGAGAGGGAGGATAGTCAA
TGTCGGCGACCACGTAAAGGAGCGTGCTCTAGTTCCATCTGTAGCATCTG
CTCGCTGGCGAATTCGTGGTGATGGTGGG
back to top