mRNA_C-tenellus_contig10223.1.2 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig10223.1.2 vs. uniprot
Match: A0A7S2V4J2_9STRA (KRR-R motif-containing protein 1 (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V4J2_9STRA) HSP 1 Score: 174 bits (440), Expect = 2.530e-53 Identity = 85/109 (77.98%), Postives = 91/109 (83.49%), Query Frame = 1 Query: 1 KNHNKYRRDKPWDNANIDHWAISSWKDDDMKVSRFQDSSLLEESSFATLFPKYREKYLREVWPIVTKALEKRGLACELDLIEGSMTVRTTRKTRDPYAIIKARDLIKLL 327 KNHNKYRRDKPWDN NIDHW + W +DMK +LLEESSFATLFPKYREKYLREVWPIVTKAL+ G+ CEL+LIEGSMTVRTTRKT DPY IIKARDLIKLL Sbjct: 27 KNHNKYRRDKPWDNENIDHWKVEQWNKEDMK------GALLEESSFATLFPKYREKYLREVWPIVTKALQAVGIGCELNLIEGSMTVRTTRKTSDPYIIIKARDLIKLL 129
BLAST of mRNA_C-tenellus_contig10223.1.2 vs. uniprot
Match: A0A836CN64_9STRA (KRR1 small subunit processome component n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CN64_9STRA) HSP 1 Score: 174 bits (440), Expect = 4.400e-51 Identity = 82/109 (75.23%), Postives = 94/109 (86.24%), Query Frame = 1 Query: 1 KNHNKYRRDKPWDNANIDHWAISSWKDDDMKVSRFQDSSLLEESSFATLFPKYREKYLREVWPIVTKALEKRGLACELDLIEGSMTVRTTRKTRDPYAIIKARDLIKLL 327 KN+ KYRRDKPWDN +IDHWA WKD+DM LLEESSFATLFPKYREKYLREVWP+VTKALEKRG+ CELDL+EGSMTVRT+R+TRDPYA++KARD++KLL Sbjct: 17 KNNRKYRRDKPWDNESIDHWAQPEWKDEDMP------GPLLEESSFATLFPKYREKYLREVWPMVTKALEKRGIGCELDLVEGSMTVRTSRRTRDPYAVVKARDVVKLL 119
BLAST of mRNA_C-tenellus_contig10223.1.2 vs. uniprot
Match: A0A812WNJ2_SYMMI (KRR-R motif-containing protein 1 n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812WNJ2_SYMMI) HSP 1 Score: 167 bits (422), Expect = 1.920e-50 Identity = 79/109 (72.48%), Postives = 92/109 (84.40%), Query Frame = 1 Query: 1 KNHNKYRRDKPWDNANIDHWAISSWKDDDMKVSRFQDSSLLEESSFATLFPKYREKYLREVWPIVTKALEKRGLACELDLIEGSMTVRTTRKTRDPYAIIKARDLIKLL 327 KNH KYR+DKPWD+ ++DHW + W + +K SSLLEESSFATLFPKYREKYLREVWPIVTKALE G++CEL+L+EGSMTVRTTRKT+DPY I+KARDLIKLL Sbjct: 4 KNHKKYRKDKPWDDKDVDHWKVEEWNPEHLK------SSLLEESSFATLFPKYREKYLREVWPIVTKALEGHGVSCELNLVEGSMTVRTTRKTKDPYVIMKARDLIKLL 106
BLAST of mRNA_C-tenellus_contig10223.1.2 vs. uniprot
Match: A0A7S2DCQ6_9STRA (KRR-R motif-containing protein 1 n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DCQ6_9STRA) HSP 1 Score: 169 bits (427), Expect = 7.280e-49 Identity = 81/109 (74.31%), Postives = 90/109 (82.57%), Query Frame = 1 Query: 1 KNHNKYRRDKPWDNANIDHWAISSWKDDDMKVSRFQDSSLLEESSFATLFPKYREKYLREVWPIVTKALEKRGLACELDLIEGSMTVRTTRKTRDPYAIIKARDLIKLL 327 KNHNKYRRDKPWDN IDHW + W + DM SLLEESSFATLFPKYREKYLREVWP+VT+ L+K+ +ACELDLIEGSMTV+TTRKT DPY I+KARDLIKLL Sbjct: 4 KNHNKYRRDKPWDNDEIDHWKLEDWNEGDMH------GSLLEESSFATLFPKYREKYLREVWPLVTRTLDKQKIACELDLIEGSMTVKTTRKTNDPYIILKARDLIKLL 106
BLAST of mRNA_C-tenellus_contig10223.1.2 vs. uniprot
Match: A0A7S2KVF1_9STRA (KRR1 small subunit processome component n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2KVF1_9STRA) HSP 1 Score: 167 bits (423), Expect = 3.950e-48 Identity = 79/109 (72.48%), Postives = 91/109 (83.49%), Query Frame = 1 Query: 1 KNHNKYRRDKPWDNANIDHWAISSWKDDDMKVSRFQDSSLLEESSFATLFPKYREKYLREVWPIVTKALEKRGLACELDLIEGSMTVRTTRKTRDPYAIIKARDLIKLL 327 KNHNKYRRDKPWDN +IDHW++S W DD LLEESSFATLFPKYREKYLREVWP++T++L+K +ACEL+L+EGSMTVRTTRKT DPY I+KARDLIKLL Sbjct: 14 KNHNKYRRDKPWDNPDIDHWSVSPW--DDTAGDNLPGGRLLEESSFATLFPKYREKYLREVWPLITRSLDKVKIACELNLVEGSMTVRTTRKTSDPYVILKARDLIKLL 120
BLAST of mRNA_C-tenellus_contig10223.1.2 vs. uniprot
Match: B8C0X8_THAPS (KRR1 small subunit processome component n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C0X8_THAPS) HSP 1 Score: 167 bits (422), Expect = 5.110e-48 Identity = 80/109 (73.39%), Postives = 92/109 (84.40%), Query Frame = 1 Query: 1 KNHNKYRRDKPWDNANIDHWAISSWKDDDMKVSRFQDSSLLEESSFATLFPKYREKYLREVWPIVTKALEKRGLACELDLIEGSMTVRTTRKTRDPYAIIKARDLIKLL 327 KNHNKYRRDKPWDN +IDHWAI+ W D++ LLEESSFATLFPKYREKYLREVWP+VTK+L+K +ACEL+L+EGSMTVRTT+KT DPY I+KARDLIKLL Sbjct: 22 KNHNKYRRDKPWDNPSIDHWAITPW-DEETNNDSLPGGRLLEESSFATLFPKYREKYLREVWPLVTKSLDKYKVACELNLVEGSMTVRTTKKTSDPYIILKARDLIKLL 129
BLAST of mRNA_C-tenellus_contig10223.1.2 vs. uniprot
Match: A0A196SI70_BLAHN (KRR1 small subunit processome component n=1 Tax=Blastocystis sp. subtype 1 (strain ATCC 50177 / NandII) TaxID=478820 RepID=A0A196SI70_BLAHN) HSP 1 Score: 161 bits (408), Expect = 8.720e-47 Identity = 76/104 (73.08%), Postives = 87/104 (83.65%), Query Frame = 1 Query: 16 YRRDKPWDNANIDHWAISSWKDDDMKVSRFQDSSLLEESSFATLFPKYREKYLREVWPIVTKALEKRGLACELDLIEGSMTVRTTRKTRDPYAIIKARDLIKLL 327 YR+DKPWD +IDHW I WKDDDMK LLEESSFAT+FP+YRE+YLREVWP+VTK L+K G+ACELD IEG+MTVRTTRKT+DPY I+KARDLIKLL Sbjct: 24 YRKDKPWDGDHIDHWKIEEWKDDDMKAP------LLEESSFATMFPRYREQYLREVWPLVTKELDKVGIACELDCIEGTMTVRTTRKTKDPYIIVKARDLIKLL 121
BLAST of mRNA_C-tenellus_contig10223.1.2 vs. uniprot
Match: A0A5A8CHK8_CAFRO (KRR1 small subunit processome component n=5 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8CHK8_CAFRO) HSP 1 Score: 163 bits (412), Expect = 1.190e-46 Identity = 79/109 (72.48%), Postives = 91/109 (83.49%), Query Frame = 1 Query: 1 KNHNKYRRDKPWDNANIDHWAISSWKDDDMKVSRFQDSSLLEESSFATLFPKYREKYLREVWPIVTKALEKRGLACELDLIEGSMTVRTTRKTRDPYAIIKARDLIKLL 327 KNHNKYRRDKPWD+ IDHWAI W MK SL+EESSFATLFP+YREKYLRE+WP VTKALE +G+ACEL+L+EGSMTV+TTRKTRDP+ I+KARDLI+LL Sbjct: 31 KNHNKYRRDKPWDHDGIDHWAIPEWDPAMMK------HSLVEESSFATLFPQYREKYLREIWPAVTKALEAQGIACELNLVEGSMTVKTTRKTRDPFIILKARDLIRLL 133
BLAST of mRNA_C-tenellus_contig10223.1.2 vs. uniprot
Match: K0TB32_THAOC (KRR-R motif-containing protein 1 n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TB32_THAOC) HSP 1 Score: 163 bits (412), Expect = 1.840e-46 Identity = 79/109 (72.48%), Postives = 89/109 (81.65%), Query Frame = 1 Query: 1 KNHNKYRRDKPWDNANIDHWAISSWKDDDMKVSRFQDSSLLEESSFATLFPKYREKYLREVWPIVTKALEKRGLACELDLIEGSMTVRTTRKTRDPYAIIKARDLIKLL 327 KNHNKYRRDKPWDNA+IDHW + W D+ LLEESSFATLFPKYREKYLREVWP+VT+ L+K +ACEL+L+EGSMTVRTTRKT DPY I+KARDLIKLL Sbjct: 26 KNHNKYRRDKPWDNADIDHWENNPW--DESTGDTLPGGRLLEESSFATLFPKYREKYLREVWPLVTRTLDKYKIACELNLVEGSMTVRTTRKTSDPYIILKARDLIKLL 132
BLAST of mRNA_C-tenellus_contig10223.1.2 vs. uniprot
Match: B7FXP7_PHATC (KRR1 small subunit processome component n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FXP7_PHATC) HSP 1 Score: 161 bits (408), Expect = 3.020e-46 Identity = 74/109 (67.89%), Postives = 91/109 (83.49%), Query Frame = 1 Query: 1 KNHNKYRRDKPWDNANIDHWAISSWKDDDMKVSRFQDSSLLEESSFATLFPKYREKYLREVWPIVTKALEKRGLACELDLIEGSMTVRTTRKTRDPYAIIKARDLIKLL 327 KNHNKYRRDKPWDN +IDHW ++SW DD LLEESSFATLFPKYRE YLR++WP+VT+ L++ G+ACEL+L+EGSMTVRTT++T+DPY I+KARDL+KLL Sbjct: 14 KNHNKYRRDKPWDNDDIDHWKLASWNADD-GGDTLPGGRLLEESSFATLFPKYREAYLRQIWPVVTRHLDQHGVACELNLVEGSMTVRTTKRTKDPYVILKARDLLKLL 121 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig10223.1.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig10223.1.2 >prot_C-tenellus_contig10223.1.2 ID=prot_C-tenellus_contig10223.1.2|Name=mRNA_C-tenellus_contig10223.1.2|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=109bp KNHNKYRRDKPWDNANIDHWAISSWKDDDMKVSRFQDSSLLEESSFATLFback to top mRNA from alignment at C-tenellus_contig10223:2976..4392+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig10223.1.2 ID=mRNA_C-tenellus_contig10223.1.2|Name=mRNA_C-tenellus_contig10223.1.2|organism=Choristocarpus tenellus KU2346|type=mRNA|length=1417bp|location=Sequence derived from alignment at C-tenellus_contig10223:2976..4392+ (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig10223:2976..4392+ >mRNA_C-tenellus_contig10223.1.2 ID=mRNA_C-tenellus_contig10223.1.2|Name=mRNA_C-tenellus_contig10223.1.2|organism=Choristocarpus tenellus KU2346|type=CDS|length=327bp|location=Sequence derived from alignment at C-tenellus_contig10223:2976..4392+ (Choristocarpus tenellus KU2346)back to top |