mRNA_C-tenellus_contig10219.1.1 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig10219.1.1 vs. uniprot
Match: D7G7T8_ECTSI (CRAL-TRIO domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7T8_ECTSI) HSP 1 Score: 190 bits (482), Expect = 1.730e-55 Identity = 106/202 (52.48%), Postives = 136/202 (67.33%), Query Frame = 1 Query: 4 SSFRQLCMEVSVFVFCMLIAALGSGLAVASHSFAPSVRTMLTGR-EPSG---YNPRLKRCNASGMLSTASE-KGLVNAAAAMDRAAAAPLEREDKVPPRFLRAFCGNLNKASERWKTTLAWRRENDVDTILNEPQPYFSIIKEHFPSFMCVYGRSRQGHVVVYDKLAGVDMHAMAEQ-GVTVPVLLRHWIFCAEYMWRVVHP 591 SS +C+ VF FC++++AL S + VA+ ++R L EPS +NPRL +AS L SE ++ AA AMDRAAAAPL E K+P R++RAFCGN A ERWK TL WR+EN++D ILNEPQ +F I+ +FPS M GRSR GH+VVYDKL GVDM + + GVTVP+LLRHWIF +EYM+RV+ P Sbjct: 37 SSQNMVCLPPHVFAFCIVMSALVSAIVVANQRIYGAIREYLRQLLEPSASRVHNPRLLHRSASHQLDKDSEGANVIEAAEAMDRAAAAPLALEHKIPARYVRAFCGNEKHALERWKATLKWRKENEIDAILNEPQQFFHDIRRYFPSHMS--GRSRGGHIVVYDKLGGVDMRTLRRKLGVTVPMLLRHWIFVSEYMYRVLQP 236
BLAST of mRNA_C-tenellus_contig10219.1.1 vs. uniprot
Match: A0A6H5LAB2_9PHAE (CRAL-TRIO domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LAB2_9PHAE) HSP 1 Score: 186 bits (471), Expect = 6.220e-52 Identity = 104/202 (51.49%), Postives = 135/202 (66.83%), Query Frame = 1 Query: 4 SSFRQLCMEVSVFVFCMLIAALGSGLAVASHSFAPSVRTMLTGR-EPSG---YNPRLKRCNASGMLSTASEKG-LVNAAAAMDRAAAAPLEREDKVPPRFLRAFCGNLNKASERWKTTLAWRRENDVDTILNEPQPYFSIIKEHFPSFMCVYGRSRQGHVVVYDKLAGVDMHAMAEQ-GVTVPVLLRHWIFCAEYMWRVVHP 591 SS +C+ VF FC++++AL S + VA+ ++R L EPS +NPRL +AS L SE ++ AA AMDRAAAAPL E K+P R++RAFCGN A ERWK TL WR+EN++D ILNEPQ +F I+ +FPS M GRSR GH+VVY+KL VDM + + GVTVP+LLRHWIF +EYM+RV+ P Sbjct: 35 SSQNMVCLPPHVFAFCIVMSALVSAIVVANQRIYGAIREYLRQLLEPSASRVHNPRLLHRSASHQLDKDSEGAHVIEAAEAMDRAAAAPLALEHKIPARYVRAFCGNEKHALERWKATLKWRKENEIDAILNEPQQFFHDIRRYFPSHMS--GRSRGGHIVVYEKLGAVDMRTLRRKLGVTVPMLLRHWIFVSEYMYRVLQP 234
BLAST of mRNA_C-tenellus_contig10219.1.1 vs. uniprot
Match: A0A7S4DBX9_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DBX9_HETAK) HSP 1 Score: 112 bits (281), Expect = 7.870e-26 Identity = 49/119 (41.18%), Postives = 77/119 (64.71%), Query Frame = 1 Query: 235 DRAAAAPLEREDKVPPRFLRAFCGNLNKASERWKTTLAWRRENDVDTILNEPQPYFSIIKEHFPSFMCVYGRSRQGHVVVYDKLAGVDMHAMAEQGVTVPVLLRHWIFCAEYMWRVVHP 591 D A AP VP +F+ ++ +A RW T WR + +DTIL+EPQP+F +IK+H+P FMC GR++ G++V Y++L +D+ A+A G+TV +RH++F EY+WR++ P Sbjct: 117 DGEAMAPASALPPVPRKFVDGCFQDMVEAKRRWAMTHRWRVKEKIDTILDEPQPHFKVIKQHYPHFMC--GRAKSGNIVYYERLGEIDLGAIAASGITVDQCVRHYVFITEYLWRILSP 233
BLAST of mRNA_C-tenellus_contig10219.1.1 vs. uniprot
Match: A0A485K5A0_9STRA (Aste57867_436 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485K5A0_9STRA) HSP 1 Score: 108 bits (270), Expect = 1.570e-25 Identity = 46/113 (40.71%), Postives = 74/113 (65.49%), Query Frame = 1 Query: 253 PLEREDKVPPRFLRAFCGNLNKASERWKTTLAWRRENDVDTILNEPQPYFSIIKEHFPSFMCVYGRSRQGHVVVYDKLAGVDMHAMAEQGVTVPVLLRHWIFCAEYMWRVVHP 591 P+ E PRF+ A G+ K RW+ T WRREN++D +L+EPQP+F IIK+++P + +G+S+ GH V Y++L VD + + G+ + LLRH++F E++W+V+ P Sbjct: 21 PVIEEIPFSPRFIAAEKGDEEKGRHRWEATRQWRRENNIDGLLHEPQPHFDIIKKNYPQYF--HGKSKNGHCVYYERLGYVDFKTLKKSGLNMDQLLRHYMFITEFLWKVLEP 131
BLAST of mRNA_C-tenellus_contig10219.1.1 vs. uniprot
Match: A0A3R6Z8R0_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A3R6Z8R0_9STRA) HSP 1 Score: 112 bits (279), Expect = 2.840e-25 Identity = 47/104 (45.19%), Postives = 74/104 (71.15%), Query Frame = 1 Query: 280 PRFLRAFCGNLNKASERWKTTLAWRRENDVDTILNEPQPYFSIIKEHFPSFMCVYGRSRQGHVVVYDKLAGVDMHAMAEQGVTVPVLLRHWIFCAEYMWRVVHP 591 PRF+ A GN+ K R+++TL WRREN+VD +L EPQP+F +IK+++P + +G+S +GH V Y+K+ +D+ AM G+T+ LLRH+++ EYMW ++ P Sbjct: 320 PRFIAAEKGNVEKGRARYESTLQWRRENNVDGMLQEPQPHFHLIKKYYPQYF--HGKSIKGHCVYYEKVGKIDLKAMKAAGLTIDQLLRHYVYLTEYMWTILEP 421
BLAST of mRNA_C-tenellus_contig10219.1.1 vs. uniprot
Match: A0A024UU13_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UU13_9STRA) HSP 1 Score: 112 bits (279), Expect = 3.910e-25 Identity = 47/104 (45.19%), Postives = 74/104 (71.15%), Query Frame = 1 Query: 280 PRFLRAFCGNLNKASERWKTTLAWRRENDVDTILNEPQPYFSIIKEHFPSFMCVYGRSRQGHVVVYDKLAGVDMHAMAEQGVTVPVLLRHWIFCAEYMWRVVHP 591 PRF+ A GN+ K R+++TL WRREN+VD +L EPQP+F +IK+++P + +G+S +GH V Y+K+ +D+ AM G+T+ LLRH+++ EYMW ++ P Sbjct: 476 PRFIAAEKGNVEKGRARYESTLQWRRENNVDGMLQEPQPHFHLIKKYYPQYF--HGKSIKGHCVYYEKVGKIDLKAMKAAGLTIDQLLRHYVYLTEYMWTILEP 577
BLAST of mRNA_C-tenellus_contig10219.1.1 vs. uniprot
Match: A0A7S3Y7R1_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y7R1_HETAK) HSP 1 Score: 111 bits (278), Expect = 4.020e-25 Identity = 51/113 (45.13%), Postives = 74/113 (65.49%), Query Frame = 1 Query: 241 AAAAPLEREDKVPPRFLRAFCGNLNKASERWKTTLAWRRENDVDTILNEPQPYFSIIKEHFPSFMCVYGRSRQGHVVVYDKLAGVDMHAMAEQGVTVPVLLRHWIFCAEYMWR 579 AAA P +P R++R G+L +A RW TL WRRE +VD IL+EPQPYF +IK+++P F Y R R G V Y+++ D+ AM +GVT+ L+RH++F +E++WR Sbjct: 149 AAAGPTAGGAALPDRYIRGCDGDLEEARRRWALTLRWRREQNVDGILDEPQPYFFVIKKYYPHF--TYKRGRNGCVTYYEQVGRADIEAMRARGVTIAALVRHYVFVSEFLWR 259
BLAST of mRNA_C-tenellus_contig10219.1.1 vs. uniprot
Match: A0A024USX5_9STRA (CRAL-TRIO domain-containing protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024USX5_9STRA) HSP 1 Score: 106 bits (265), Expect = 8.210e-25 Identity = 43/104 (41.35%), Postives = 76/104 (73.08%), Query Frame = 1 Query: 280 PRFLRAFCGNLNKASERWKTTLAWRRENDVDTILNEPQPYFSIIKEHFPSFMCVYGRSRQGHVVVYDKLAGVDMHAMAEQGVTVPVLLRHWIFCAEYMWRVVHP 591 PRF+ A GN K +R+++TL+WRR+N +DT+++EPQ +F +IK+++P + +G+S+ GH V Y+KL V+ A+ + G+++ LLRH+++ EY+W+V+ P Sbjct: 27 PRFIAAEKGNAEKGRQRYESTLSWRRDNRIDTLIDEPQVHFHLIKKNYPQYF--HGKSKNGHRVYYEKLGSVNFKALKKSGLSMDQLLRHYMYITEYLWKVLDP 128
BLAST of mRNA_C-tenellus_contig10219.1.1 vs. uniprot
Match: A0A7S1UKD6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UKD6_9STRA) HSP 1 Score: 108 bits (271), Expect = 3.790e-24 Identity = 44/109 (40.37%), Postives = 75/109 (68.81%), Query Frame = 1 Query: 265 EDKVPPRFLRAFCGNLNKASERWKTTLAWRRENDVDTILNEPQPYFSIIKEHFPSFMCVYGRSRQGHVVVYDKLAGVDMHAMAEQGVTVPVLLRHWIFCAEYMWRVVHP 591 E +P +F+ C L +AS RW T WR++ +D +L+EPQP+F+ IK ++P F C GR+R G VV Y+++ +D+ A+ ++G+++ +L+RH++F E+MWR+ HP Sbjct: 236 EQAIPVQFIEG-CPPLTEASRRWDITAKWRKQEGIDDMLDEPQPHFNNIKRYYPHFCC--GRTRDGDVVYYEQVGNIDLAALRDRGLSIDLLVRHYLFTTEFMWRMTHP 341
BLAST of mRNA_C-tenellus_contig10219.1.1 vs. uniprot
Match: A0A7S2RPQ3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RPQ3_9STRA) HSP 1 Score: 99.4 bits (246), Expect = 8.310e-23 Identity = 43/102 (42.16%), Postives = 68/102 (66.67%), Query Frame = 1 Query: 274 VPPRFLRAFCGNLNKASERWKTTLAWRRENDVDTILNEPQPYFSIIKEHFPSFMCVYGRSRQGHVVVYDKLAGVDMHAMAEQGVTVPVLLRHWIFCAEYMWR 579 VP R LR G+ +A RW T WRRE +VD++L+EPQP F +IK +P F+ +G++R G + +++ +D+ A+ GVTVPVL+RH++F +E++W Sbjct: 74 VPGRVLRGCDGDPVEAKRRWALTCIWRREYNVDSVLSEPQPCFHVIKRCYPHFL--HGKARGGQAIYIEQVGRIDVQALLRHGVTVPVLMRHYVFNSEFLWN 173 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig10219.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig10219.1.1 >prot_C-tenellus_contig10219.1.1 ID=prot_C-tenellus_contig10219.1.1|Name=mRNA_C-tenellus_contig10219.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=197bp MSSFRQLCMEVSVFVFCMLIAALGSGLAVASHSFAPSVRTMLTGREPSGYback to top mRNA from alignment at C-tenellus_contig10219:5..2024- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig10219.1.1 ID=mRNA_C-tenellus_contig10219.1.1|Name=mRNA_C-tenellus_contig10219.1.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=2020bp|location=Sequence derived from alignment at C-tenellus_contig10219:5..2024- (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig10219:5..2024- >mRNA_C-tenellus_contig10219.1.1 ID=mRNA_C-tenellus_contig10219.1.1|Name=mRNA_C-tenellus_contig10219.1.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=591bp|location=Sequence derived from alignment at C-tenellus_contig10219:5..2024- (Choristocarpus tenellus KU2346)back to top |