mRNA_C-tenellus_contig9985.1.1 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig9985.1.1 vs. uniprot
Match: D7G660_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G660_ECTSI) HSP 1 Score: 140 bits (353), Expect = 7.890e-37 Identity = 73/98 (74.49%), Postives = 81/98 (82.65%), Query Frame = 1 Query: 1 TPGRLRVVFASNALATPFAAGVLLFPYPWCFMSLLCAELLGEMWIGVVLTVVMALVPRGVRVTSVALYNFIITNISGLAAALVPMIRAYYETERTFYF 294 T GRL VV SNALA+PFA GVLL PYPWCF+ LL ELLGEMWIGVVL VV+ALVPR VR+TSVALYNFIITNISGL+ LVP+IR Y++E TF F Sbjct: 501 TAGRLWVVIVSNALASPFAVGVLLAPYPWCFLCLLGVELLGEMWIGVVLAVVIALVPRHVRITSVALYNFIITNISGLSTTLVPLIRGRYDSEHTFSF 598
BLAST of mRNA_C-tenellus_contig9985.1.1 vs. uniprot
Match: A0A6H5L2A6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2A6_9PHAE) HSP 1 Score: 139 bits (350), Expect = 3.060e-36 Identity = 72/98 (73.47%), Postives = 81/98 (82.65%), Query Frame = 1 Query: 1 TPGRLRVVFASNALATPFAAGVLLFPYPWCFMSLLCAELLGEMWIGVVLTVVMALVPRGVRVTSVALYNFIITNISGLAAALVPMIRAYYETERTFYF 294 T GRL VV SNALA+PFA GVLL PYPWCF+ LL ELLGEMWIGVVL VV+ALVPR VR+TSVA+YNFIITNISGL+ LVP+IR Y++E TF F Sbjct: 551 TAGRLWVVIVSNALASPFAVGVLLAPYPWCFVCLLGVELLGEMWIGVVLAVVIALVPRQVRITSVAMYNFIITNISGLSTTLVPLIRGRYDSEHTFSF 648
BLAST of mRNA_C-tenellus_contig9985.1.1 vs. uniprot
Match: A0A1S3HS59_LINUN (protein spinster homolog 1 n=1 Tax=Lingula unguis TaxID=7574 RepID=A0A1S3HS59_LINUN) HSP 1 Score: 89.0 bits (219), Expect = 1.380e-18 Identity = 45/88 (51.14%), Postives = 61/88 (69.32%), Query Frame = 1 Query: 10 RLRVVFASNALATPFAAGVLLFPYPWCFMSLLCAELLGEMWIGVVLTVVMALVPRGVRVTSVALYNFIITNISGLAAALVPMIRAYYE 273 R+ V+ AS LA PFAAG L P PW ++SL+ + ++GEMW+GV L VV+ LVP VR ++VA+Y FIITNI G LVP ++ +E Sbjct: 353 RVLVLVASQVLAAPFAAGALFLPAPWAYISLIPSNIIGEMWVGVTLAVVVELVPSKVRTSAVAVYLFIITNIGGNIPLLVPPLQTAFE 440
BLAST of mRNA_C-tenellus_contig9985.1.1 vs. uniprot
Match: W5MAW6_LEPOC (D-galactonate transporter-like n=2 Tax=Lepisosteus oculatus TaxID=7918 RepID=W5MAW6_LEPOC) HSP 1 Score: 87.8 bits (216), Expect = 3.420e-18 Identity = 44/88 (50.00%), Postives = 59/88 (67.05%), Query Frame = 1 Query: 10 RLRVVFASNALATPFAAGVLLFPYPWCFMSLLCAELLGEMWIGVVLTVVMALVPRGVRVTSVALYNFIITNISGLAAALVPMIRAYYE 273 R+ V+ S LA PF GVL+ P P+CF+ L+ A ++GEMW+GV L +++ LVP VR +SVA Y FIITNI G A LVP++ Y Sbjct: 353 RIWVLVVSQILAAPFLIGVLILPPPYCFLLLIPANIIGEMWVGVALAILVELVPSAVRTSSVAFYLFIITNIGGNAPLLVPLLAKLYN 440
BLAST of mRNA_C-tenellus_contig9985.1.1 vs. uniprot
Match: UPI001604F53C (protein spinster homolog 1 isoform X1 n=4 Tax=Folsomia candida TaxID=158441 RepID=UPI001604F53C) HSP 1 Score: 85.1 bits (209), Expect = 3.260e-17 Identity = 43/90 (47.78%), Postives = 62/90 (68.89%), Query Frame = 1 Query: 7 GRLRVVFASNALATPFAAGVLLFPYPWCFMSLLCAELLGEMWIGVVLTVVMALVPRGVRVTSVALYNFIITNISGLAAALVPMIRAYYET 276 GR+ V+ S LA PFAAG L+ P P+ +MSL+ ++GEMW+ V L V++ LVP ++ TSVA+Y FII+NI G LVP++R +E+ Sbjct: 400 GRIWVLIMSQILAAPFAAGALVLPPPYAYMSLIPTYIIGEMWVSVTLAVLVELVPAKIKTTSVAVYFFIISNIGGNMPLLVPVLRPAFES 489
BLAST of mRNA_C-tenellus_contig9985.1.1 vs. uniprot
Match: B3RN70_TRIAD (MFS domain-containing protein (Fragment) n=2 Tax=Trichoplax TaxID=10227 RepID=B3RN70_TRIAD) HSP 1 Score: 84.3 bits (207), Expect = 5.270e-17 Identity = 42/83 (50.60%), Postives = 58/83 (69.88%), Query Frame = 1 Query: 10 RLRVVFASNALATPFAAGVLLFPYPWCFMSLLCAELLGEMWIGVVLTVVMALVPRGVRVTSVALYNFIITNISGLAAALVPMI 258 RL V+ S A+A+PFA LL P PW F++L+ + ++GEMWIGV L V++ +VP +R +VA+Y FIITNI GL L+P I Sbjct: 340 RLWVLIMSQAVASPFALLTLLLPPPWAFIALIPSNIIGEMWIGVTLAVIVEVVPSNIRTVAVAIYLFIITNIGGLMPLLIPPI 422
BLAST of mRNA_C-tenellus_contig9985.1.1 vs. uniprot
Match: UPI000359636C (protein spinster homolog 1 isoform X1 n=2 Tax=Aplysia californica TaxID=6500 RepID=UPI000359636C) HSP 1 Score: 84.3 bits (207), Expect = 6.110e-17 Identity = 45/88 (51.14%), Postives = 58/88 (65.91%), Query Frame = 1 Query: 10 RLRVVFASNALATPFAAGVLLFPYPWCFMSLLCAELLGEMWIGVVLTVVMALVPRGVRVTSVALYNFIITNISGLAAALVPMIRAYYE 273 R+ V+ AS LA PFAAG L PW F SL+ A ++GEMW+GV L V + LVP +R ++VALY FII+NI G LVP I+ +E Sbjct: 452 RVIVLVASQFLAAPFAAGALFLDVPWAFFSLIPANIIGEMWVGVTLAVGVELVPSEIRTSAVALYLFIISNIGGNVPLLVPPIQEAFE 539
BLAST of mRNA_C-tenellus_contig9985.1.1 vs. uniprot
Match: A0A1D2NCK7_ORCCI (Protein spinster 1 n=1 Tax=Orchesella cincta TaxID=48709 RepID=A0A1D2NCK7_ORCCI) HSP 1 Score: 83.6 bits (205), Expect = 1.040e-16 Identity = 42/90 (46.67%), Postives = 62/90 (68.89%), Query Frame = 1 Query: 7 GRLRVVFASNALATPFAAGVLLFPYPWCFMSLLCAELLGEMWIGVVLTVVMALVPRGVRVTSVALYNFIITNISGLAAALVPMIRAYYET 276 GR+ V+ S LA PFAAG LL P P+ ++SL+ ++GEMW+ V L V++ LVP ++ TSVA+Y FII+NI G LVP++R +++ Sbjct: 307 GRIWVLILSQVLAAPFAAGALLLPTPYAYISLIPNYIIGEMWVSVTLAVLVELVPSYIKTTSVAVYFFIISNIGGNMPLLVPVLRPIFQS 396
BLAST of mRNA_C-tenellus_contig9985.1.1 vs. uniprot
Match: A0A8J1U014_OWEFU (Ofus.G082900 protein n=2 Tax=Owenia fusiformis TaxID=6347 RepID=A0A8J1U014_OWEFU) HSP 1 Score: 82.8 bits (203), Expect = 2.020e-16 Identity = 42/88 (47.73%), Postives = 58/88 (65.91%), Query Frame = 1 Query: 10 RLRVVFASNALATPFAAGVLLFPYPWCFMSLLCAELLGEMWIGVVLTVVMALVPRGVRVTSVALYNFIITNISGLAAALVPMIRAYYE 273 R+ V+ S +A PFAAG L PWC++SL+ A ++GEMW+GV L VV+ LVP VR ++A Y FII+NI G LVP I+ ++ Sbjct: 350 RIMVLVISQLVAAPFAAGALFLNPPWCYISLIPANIVGEMWVGVTLAVVIELVPWSVRTGAIAFYLFIISNIGGNVPLLVPPIQKAFQ 437
BLAST of mRNA_C-tenellus_contig9985.1.1 vs. uniprot
Match: A0A3S0ZD38_ELYCH (Uncharacterized protein n=1 Tax=Elysia chlorotica TaxID=188477 RepID=A0A3S0ZD38_ELYCH) HSP 1 Score: 82.4 bits (202), Expect = 2.770e-16 Identity = 44/88 (50.00%), Postives = 59/88 (67.05%), Query Frame = 1 Query: 10 RLRVVFASNALATPFAAGVLLFPYPWCFMSLLCAELLGEMWIGVVLTVVMALVPRGVRVTSVALYNFIITNISGLAAALVPMIRAYYE 273 R+ V+ AS +A PFAAG L PW F+SL+ A ++GEMW+GV L V + LVP VR ++VA+Y FII+NI G LVP I+ +E Sbjct: 352 RIFVLVASQFVAAPFAAGALFLDVPWSFISLIPANIIGEMWVGVTLAVGVELVPAQVRTSAVAVYLFIISNIGGNVPLLVPPIQHSFE 439 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig9985.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig9985.1.1 >prot_C-tenellus_contig9985.1.1 ID=prot_C-tenellus_contig9985.1.1|Name=mRNA_C-tenellus_contig9985.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=98bp TPGRLRVVFASNALATPFAAGVLLFPYPWCFMSLLCAELLGEMWIGVVLTback to top mRNA from alignment at C-tenellus_contig9985:5419..5712- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig9985.1.1 ID=mRNA_C-tenellus_contig9985.1.1|Name=mRNA_C-tenellus_contig9985.1.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=294bp|location=Sequence derived from alignment at C-tenellus_contig9985:5419..5712- (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig9985:5419..5712- >mRNA_C-tenellus_contig9985.1.1 ID=mRNA_C-tenellus_contig9985.1.1|Name=mRNA_C-tenellus_contig9985.1.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=294bp|location=Sequence derived from alignment at C-tenellus_contig9985:5419..5712- (Choristocarpus tenellus KU2346)back to top |