mRNA_C-tenellus_contig992.2.2 (mRNA) Choristocarpus tenellus KU2346

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-tenellus_contig992.2.2
Unique NamemRNA_C-tenellus_contig992.2.2
TypemRNA
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Homology
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BLAST of mRNA_C-tenellus_contig992.2.2 vs. uniprot
Match: D8LMG2_ECTSI (Casein kinase II subunit beta n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LMG2_ECTSI)

HSP 1 Score: 352 bits (903), Expect = 9.340e-111
Identity = 170/213 (79.81%), Postives = 189/213 (88.73%), Query Frame = 2 
Query:  608 ESHLEVDEDYIHDDFNMTGLATMVPYYEYALDMILDVEMPVGQTLTEEQQEVVENAAEMLYGLIHARYILTSRGMQGMFEKFHMGTFGRCPRVYCQGQSVLPVGLSDVPRSCTVAVYCPKCQDIFHPKSTRQANIDGAYFGTTFPHLFLLAHPDLIPARQSQTYVSRIYGFKIHSSSVYHKNNKEGGGNSDGTARTSRRRTSVKKEKSRHAAR 1246
            E   EVDEDYI DDFN+TGL+TMVPYYEYALDMILDVEMP GQTLTEEQQEVVE+AAE+LYGLIHARYILTSRGMQGMF+KF +G FGRCPRVYCQGQ+VLP GLSDVPR+CTVAVYCPKCQDIFHPKSTRQANIDGAYFGTTF HLFLLAHP+LIP+R SQ Y SRIYGFKIH +S YH+NNK+      G+ R SRR++S KK+K+RH+ R
Sbjct:  128 EFFCEVDEDYIQDDFNLTGLSTMVPYYEYALDMILDVEMPAGQTLTEEQQEVVESAAEILYGLIHARYILTSRGMQGMFDKFQVGAFGRCPRVYCQGQNVLPAGLSDVPRNCTVAVYCPKCQDIFHPKSTRQANIDGAYFGTTFSHLFLLAHPELIPSRPSQAYCSRIYGFKIHQTSAYHRNNKDPSNGEGGSGRGSRRKSS-KKDKARHSGR 339
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BLAST of mRNA_C-tenellus_contig992.2.2 vs. uniprot
Match: A0A836CD25_9STRA (Casein kinase II subunit beta n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CD25_9STRA)

HSP 1 Score: 305 bits (780), Expect = 1.150e-92
Identity = 150/225 (66.67%), Postives = 176/225 (78.22%), Query Frame = 2 
Query:  608 ESHLEVDEDYIHDDFNMTGLATMVPYYEYALDMILDVEMPVGQT----------------------LTEEQQEVVENAAEMLYGLIHARYILTSRGMQGMFEKFHMGTFGRCPRVYCQGQSVLPVGLSDVPRSCTVAVYCPKCQDIFHPKSTRQANIDGAYFGTTFPHLFLLAHPDLIPARQSQTYVSRIYGFKIHSSSVYHKNNKEGGGNSD---GTARTSRRR 1207
            E   EVDE+YI DDFN+TGL+T+VPYY+YALDMILDVE+P                          LTEEQQEVVE+AAEMLYGLIHAR+ILT+RGMQGM  K+  G FGRCPR+YCQGQ+VLPVGLSDVPRSCTVAVYCP+CQDIFHPKSTRQAN+DGAYFGTTFPHLFLL HPD+IPAR SQ+YV R+YGF+I+++S Y++NN+    + D   G+ART R R
Sbjct:  106 EFFCEVDEEYIQDDFNLTGLSTLVPYYDYALDMILDVEVPTEHXXXXXXXXXXXXXXXXXXXXXXXLTEEQQEVVESAAEMLYGLIHARFILTTRGMQGMLSKYQTGAFGRCPRIYCQGQNVLPVGLSDVPRSCTVAVYCPRCQDIFHPKSTRQANVDGAYFGTTFPHLFLLTHPDVIPARPSQSYVPRVYGFRINAASAYYRNNRRERASEDSQSGSARTRRER 330
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BLAST of mRNA_C-tenellus_contig992.2.2 vs. uniprot
Match: A0A7S2EDQ1_TRICV (Casein kinase II subunit beta n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EDQ1_TRICV)

HSP 1 Score: 293 bits (750), Expect = 7.250e-89
Identity = 137/207 (66.18%), Postives = 170/207 (82.13%), Query Frame = 2 
Query:  587 FCVDACLESHLEVDEDYIHDDFNMTGLATMVPYYEYALDMILDVEMPVGQTLTEEQQEVVENAAEMLYGLIHARYILTSRGMQGMFEKFHMGTFGRCPRVYCQGQSVLPVGLSDVPRSCTVAVYCPKCQDIFHPKSTRQANIDGAYFGTTFPHLFLLAHPDLIPARQSQTYVSRIYGFKIHSSSVYHKNNKEGGGNSDGTARTSRRR 1207
            FC     E   EVDEDYI DDFN+TGL ++VPYY+YALDM+LDVEMP+  +LTEEQQE+VE+AAEMLYGLIHARYI+T+RGM  M+EK+   +FGRCP V+CQGQ VLPVGLSD+PR+ TV V+CP+C  +F PKSTRQANIDGAYFGTTFPHL+L+ HPD+IPA+ +Q YV R+YGF+IH SS+Y++N++E  G+  G  R  RRR
Sbjct:   82 FCSLRGNEFFCEVDEDYIQDDFNLTGLNSLVPYYDYALDMVLDVEMPMEDSLTEEQQEIVESAAEMLYGLIHARYIVTNRGMHAMYEKYRGASFGRCPHVFCQGQPVLPVGLSDLPRNYTVNVFCPRCHGLFFPKSTRQANIDGAYFGTTFPHLYLMTHPDVIPAKPAQQYVPRVYGFRIHRSSLYYRNHEEQHGSGGGNDREHRRR 288
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BLAST of mRNA_C-tenellus_contig992.2.2 vs. uniprot
Match: A0A1E7EUU7_9STRA (Casein kinase II subunit beta n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7EUU7_9STRA)

HSP 1 Score: 290 bits (742), Expect = 1.130e-88
Identity = 131/192 (68.23%), Postives = 162/192 (84.38%), Query Frame = 2 
Query:  587 FCVDACLESHLEVDEDYIHDDFNMTGLATMVPYYEYALDMILDVEMPVGQTLTEEQQEVVENAAEMLYGLIHARYILTSRGMQGMFEKFHMGTFGRCPRVYCQGQSVLPVGLSDVPRSCTVAVYCPKCQDIFHPKSTRQANIDGAYFGTTFPHLFLLAHPDLIPARQSQTYVSRIYGFKIHSSSVYHKNNKE 1162
            FC     E   EVDEDYI DDFN+TGL+++VPYYEYALDM+LDVEMP+  +LTEEQQE+VE+AAEMLYGLIHARYI+T+RGM  M+EK+    FGRCPRV+CQGQ VLPVGLSD+PR+ TV V+CP+C  +F PKSTRQANIDGAYFGTTFPHL+L+ HPD+IP +  QTYV R+YGFK+H +S+++ N++E
Sbjct:   14 FCSLRGNEFFCEVDEDYIQDDFNLTGLSSLVPYYEYALDMVLDVEMPMEDSLTEEQQEIVESAAEMLYGLIHARYIVTNRGMHAMYEKYRAAAFGRCPRVFCQGQPVLPVGLSDLPRNYTVNVFCPRCHGLFFPKSTRQANIDGAYFGTTFPHLYLMTHPDMIPTKPQQTYVPRVYGFKVHKTSLFYINHEE 205
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BLAST of mRNA_C-tenellus_contig992.2.2 vs. uniprot
Match: A0A7S2UQR9_9STRA (Casein kinase II subunit beta n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UQR9_9STRA)

HSP 1 Score: 296 bits (757), Expect = 3.610e-88
Identity = 140/216 (64.81%), Postives = 176/216 (81.48%), Query Frame = 2 
Query:  587 FCVDACLESHLEVDEDYIHDDFNMTGLATMVPYYEYALDMILDVEMPVGQTLTEEQQEVVENAAEMLYGLIHARYILTSRGMQGMFEKFHMGTFGRCPRVYCQGQSVLPVGLSDVPRSCTVAVYCPKCQDIFHPKSTRQANIDGAYFGTTFPHLFLLAHPDLIPARQSQTYVSRIYGFKIHSSSVYHKNNKEGGGNSDGTART--SRRRTSVKKEK 1228
            FC     E   EVDEDYI DDFN+TGL  +VPYY+YALDM+LDVEMP+  TLTEEQQE+VE+AAEMLYGLIHARYI+T+RGM  M+EK+    FGRCP V+CQGQ VLPVGLSD+PR+ TV V+CP+C  +F PKSTRQANIDGAYFGTTFPHL+L+ HP++IPA+ +Q YV R+YGFK+H SS+Y++N++E    S+G +RT  SR++ S ++EK
Sbjct:  206 FCSLRGNEFFCEVDEDYIQDDFNLTGLNGLVPYYDYALDMVLDVEMPMEDTLTEEQQEIVESAAEMLYGLIHARYIVTNRGMHAMYEKYRATGFGRCPHVFCQGQPVLPVGLSDLPRNYTVNVFCPRCHGLFFPKSTRQANIDGAYFGTTFPHLYLMTHPEIIPAKPAQNYVPRVYGFKVHQSSLYYRNHEESPPKSEGGSRTGRSRQQKSTRREK 421
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BLAST of mRNA_C-tenellus_contig992.2.2 vs. uniprot
Match: A0A7S4AB83_9STRA (Casein kinase II subunit beta n=2 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4AB83_9STRA)

HSP 1 Score: 293 bits (751), Expect = 1.990e-87
Identity = 135/193 (69.95%), Postives = 165/193 (85.49%), Query Frame = 2 
Query:  587 FCVDACLESHLEVDEDYIHDDFNMTGLATMVPYYEYALDMILDVEMPVGQTLTEEQQEVVENAAEMLYGLIHARYILTSRGMQGMFEKFHMGTFGRCPRVYCQGQSVLPVGLSDVPRSCTVAVYCPKCQDIFHPKSTRQANIDGAYFGTTFPHLFLLAHPDLIPARQSQTYVSRIYGFKIHSSSVYHKNNKEG 1165
            FC     E   EVDEDYI DDFN+TGL+ +VPYY+YALDMILDVEMP+  +LTEEQQE+VE+AAEMLYGLIHARYI+T+RGM  M+EK+    FGRCPRVYCQGQ VLPVGLSD+PR+ TV V+CP+C  +F PKSTRQANIDGAYFGTTFPHL+L+ HPD+IPA+ SQTYV R+YGFK++ SS+++K+++EG
Sbjct:  199 FCSLRGNEFFCEVDEDYIQDDFNLTGLSILVPYYDYALDMILDVEMPMEDSLTEEQQEIVESAAEMLYGLIHARYIVTNRGMHAMYEKYRTVAFGRCPRVYCQGQPVLPVGLSDLPRNYTVNVFCPRCHGLFFPKSTRQANIDGAYFGTTFPHLYLMTHPDMIPAKPSQTYVPRVYGFKVNESSLFYKHHEEG 391
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BLAST of mRNA_C-tenellus_contig992.2.2 vs. uniprot
Match: A0A7S1GN37_CYCTE (Casein kinase II subunit beta n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1GN37_CYCTE)

HSP 1 Score: 293 bits (751), Expect = 3.220e-87
Identity = 136/206 (66.02%), Postives = 169/206 (82.04%), Query Frame = 2 
Query:  587 FCVDACLESHLEVDEDYIHDDFNMTGLATMVPYYEYALDMILDVEMPVGQTLTEEQQEVVENAAEMLYGLIHARYILTSRGMQGMFEKFHMGTFGRCPRVYCQGQSVLPVGLSDVPRSCTVAVYCPKCQDIFHPKSTRQANIDGAYFGTTFPHLFLLAHPDLIPARQSQTYVSRIYGFKIHSSSVYHKNNKEGGGNSDGTARTSRR 1204
            FC     E   EVDEDYI DDFN+TGL  +VPYY+YALDM+LDVEMP+  +LTEEQQE+VE+AAEMLYGLIHARYI+T+RGM  M+EK+   +FGRCP V+CQGQ VLPVGLSD+PR+ TV V+CP+C  +F PKSTRQANIDGAYFGTTFPHL+L+ HPD++PAR +Q YV R++GFKIH SS+YH+N+ EG    + + R+SR+
Sbjct:  216 FCSLRGNEFFCEVDEDYIQDDFNLTGLNGLVPYYDYALDMVLDVEMPMEDSLTEEQQEIVESAAEMLYGLIHARYIVTNRGMHAMYEKYRSASFGRCPHVFCQGQPVLPVGLSDLPRNYTVNVFCPRCHGLFFPKSTRQANIDGAYFGTTFPHLYLMTHPDMVPARPTQQYVPRVFGFKIHQSSLYHRNHAEGPSQIETSHRSSRK 421
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BLAST of mRNA_C-tenellus_contig992.2.2 vs. uniprot
Match: A0A7S1FN69_9STRA (Casein kinase II subunit beta n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FN69_9STRA)

HSP 1 Score: 290 bits (743), Expect = 3.380e-87
Identity = 133/193 (68.91%), Postives = 163/193 (84.46%), Query Frame = 2 
Query:  587 FCVDACLESHLEVDEDYIHDDFNMTGLATMVPYYEYALDMILDVEMPVGQTLTEEQQEVVENAAEMLYGLIHARYILTSRGMQGMFEKFHMGTFGRCPRVYCQGQSVLPVGLSDVPRSCTVAVYCPKCQDIFHPKSTRQANIDGAYFGTTFPHLFLLAHPDLIPARQSQTYVSRIYGFKIHSSSVYHKNNKEG 1165
            FC     E   EV+EDYI DDFN+TGL ++VPYY+YALDM+LDVEMP+  +LTEEQQE+VE+AAEMLYGLIHARYI+T+RGM  M+EK+    FGRCPRV+CQGQ VLPVGLSD+PR+ TV V+CP+C  +F PKSTRQANIDGAYFGTT PHLFL+ HPD+IPA+ SQ Y+ R+YGFKI+ SSVY++N++EG
Sbjct:  130 FCSLRGNEFFCEVEEDYIQDDFNLTGLNSLVPYYDYALDMVLDVEMPMEDSLTEEQQEIVESAAEMLYGLIHARYIVTNRGMHAMYEKYRSAAFGRCPRVFCQGQPVLPVGLSDLPRNYTVNVFCPRCHGLFFPKSTRQANIDGAYFGTTSPHLFLMTHPDIIPAKPSQNYIPRVYGFKINQSSVYYRNHEEG 322
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BLAST of mRNA_C-tenellus_contig992.2.2 vs. uniprot
Match: A0A7S4IQT0_9STRA (Casein kinase II subunit beta n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4IQT0_9STRA)

HSP 1 Score: 287 bits (734), Expect = 4.130e-87
Identity = 129/192 (67.19%), Postives = 161/192 (83.85%), Query Frame = 2 
Query:  587 FCVDACLESHLEVDEDYIHDDFNMTGLATMVPYYEYALDMILDVEMPVGQTLTEEQQEVVENAAEMLYGLIHARYILTSRGMQGMFEKFHMGTFGRCPRVYCQGQSVLPVGLSDVPRSCTVAVYCPKCQDIFHPKSTRQANIDGAYFGTTFPHLFLLAHPDLIPARQSQTYVSRIYGFKIHSSSVYHKNNKE 1162
            FC     E   EVDEDYI DDFN+TGL  +VPYY+YALDM+LDVEMP+  +LTEEQQE+VE+AAEMLYGLIHARYILT+RGM  M+EK+   +FGRCP V+CQGQ VLPVGLSD+PR+ TV V+CP+C  +F PKSTRQANIDGAYFGTTFPHL+L+ HPD+IP + +Q Y+ R+YGF++H SS+Y++N++E
Sbjct:   33 FCSLRGNEFFCEVDEDYIQDDFNLTGLNGLVPYYDYALDMVLDVEMPMEDSLTEEQQEIVESAAEMLYGLIHARYILTNRGMHAMYEKYRSASFGRCPHVFCQGQPVLPVGLSDLPRNYTVNVFCPRCHGLFFPKSTRQANIDGAYFGTTFPHLYLMTHPDMIPVKPAQRYIPRVYGFRVHRSSLYYRNHEE 224
[Close]
BLAST of mRNA_C-tenellus_contig992.2.2 vs. uniprot
Match: A0A7S2EKE4_9STRA (Casein kinase II subunit beta n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S2EKE4_9STRA)

HSP 1 Score: 288 bits (738), Expect = 2.810e-86
Identity = 132/193 (68.39%), Postives = 161/193 (83.42%), Query Frame = 2 
Query:  587 FCVDACLESHLEVDEDYIHDDFNMTGLATMVPYYEYALDMILDVEMPVGQTLTEEQQEVVENAAEMLYGLIHARYILTSRGMQGMFEKFHMGTFGRCPRVYCQGQSVLPVGLSDVPRSCTVAVYCPKCQDIFHPKSTRQANIDGAYFGTTFPHLFLLAHPDLIPARQSQTYVSRIYGFKIHSSSVYHKNNKEG 1165
            FC     E   EVDEDYI DDFN+TGL  +VPYY+YALDM+LDVEMP+   LTE+QQE+VE+AAEMLYGLIHARYI+T+RGM  M+EK+   +FGRCP V+CQGQ VLPVGLSD+PR+ TV V+CP+C  +F PKSTRQANIDGAYFGTTFPHL+L+ HPD+IPA+ +Q YV R+YGFKIH SS+Y +N++EG
Sbjct:  142 FCSLRGNEFFCEVDEDYIQDDFNLTGLNGLVPYYDYALDMVLDVEMPMEDALTEDQQEIVESAAEMLYGLIHARYIVTNRGMHAMYEKYRSASFGRCPHVFCQGQPVLPVGLSDLPRNYTVNVFCPRCHGLFFPKSTRQANIDGAYFGTTFPHLYLMTHPDMIPAKPTQHYVPRVYGFKIHQSSLYFRNHEEG 334
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig992.2.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LMG2_ECTSI9.340e-11179.81Casein kinase II subunit beta n=2 Tax=Ectocarpus T... [more]
A0A836CD25_9STRA1.150e-9266.67Casein kinase II subunit beta n=1 Tax=Tribonema mi... [more]
A0A7S2EDQ1_TRICV7.250e-8966.18Casein kinase II subunit beta n=1 Tax=Trieres chin... [more]
A0A1E7EUU7_9STRA1.130e-8868.23Casein kinase II subunit beta n=1 Tax=Fragilariops... [more]
A0A7S2UQR9_9STRA3.610e-8864.81Casein kinase II subunit beta n=1 Tax=Attheya sept... [more]
A0A7S4AB83_9STRA1.990e-8769.95Casein kinase II subunit beta n=2 Tax=Pseudo-nitzs... [more]
A0A7S1GN37_CYCTE3.220e-8766.02Casein kinase II subunit beta n=1 Tax=Cyclophora t... [more]
A0A7S1FN69_9STRA3.380e-8768.91Casein kinase II subunit beta n=1 Tax=Corethron hy... [more]
A0A7S4IQT0_9STRA4.130e-8767.19Casein kinase II subunit beta n=1 Tax=Odontella au... [more]
A0A7S2EKE4_9STRA2.810e-8668.39Casein kinase II subunit beta n=1 Tax=Ditylum brig... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig992contigC-tenellus_contig992:4973..9599 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LMG2
PFAMsCK_II_beta
Model size2611
Max annot lvl2759|Eukaryota
KEGG koko:K03115
KEGG Pathwayko03008,ko04064,ko04137,ko04139,ko04310,ko04520,ko04712,ko05162,ko05168,ko05169,map03008,map04064,map04137,map04139,map04310,map04520,map04712,map05162,map05168,map05169
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0001932,GO:0003006,GO:0003674,GO:0003824,GO:0004672,GO:0004674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005829,GO:0005956,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0007275,GO:0007623,GO:0008134,GO:0008150,GO:0008152,GO:0009314,GO:0009416,GO:0009628,GO:0009648,GO:0009791,GO:0009987,GO:0010228,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019207,GO:0019220,GO:0019222,GO:0019538,GO:0019887,GO:0022414,GO:0030234,GO:0031323,GO:0031399,GO:0032268,GO:0032501,GO:0032502,GO:0032991,GO:0036211,GO:0042325,GO:0042752,GO:0042753,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0043549,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0045859,GO:0048511,GO:0048518,GO:0048573,GO:0048608,GO:0048731,GO:0048856,GO:0050789,GO:0050790,GO:0050794,GO:0050896,GO:0051171,GO:0051174,GO:0051246,GO:0051338,GO:0060255,GO:0061458,GO:0065007,GO:0065009,GO:0071704,GO:0071900,GO:0080090,GO:0098772,GO:0140096,GO:1901564
Exons6
Evalue5.64e-119
EggNOG OGsCOG5041@1|root,KOG3092@2759|Eukaryota
Ec32 ortholog descriptionCasein kinase II, regulatory subunit
Ec32 orthologEc-05_002640.1
Descriptionprotein kinase regulator activity
Cds size774
COG categoryDKT
BRITEko00000,ko00001,ko03009
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig992.2.2prot_C-tenellus_contig992.2.2Choristocarpus tenellus KU2346polypeptideC-tenellus_contig992 6054..8237 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680790207.2791615-UTR-C-tenellus_contig992:4972..50531680790207.2791615-UTR-C-tenellus_contig992:4972..5053Choristocarpus tenellus KU2346UTRC-tenellus_contig992 4973..5053 +
1680790207.2947185-UTR-C-tenellus_contig992:5659..60531680790207.2947185-UTR-C-tenellus_contig992:5659..6053Choristocarpus tenellus KU2346UTRC-tenellus_contig992 5660..6053 +
1680790207.3662694-UTR-C-tenellus_contig992:8237..95991680790207.3662694-UTR-C-tenellus_contig992:8237..9599Choristocarpus tenellus KU2346UTRC-tenellus_contig992 8238..9599 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680790207.3072536-CDS-C-tenellus_contig992:6053..63351680790207.3072536-CDS-C-tenellus_contig992:6053..6335Choristocarpus tenellus KU2346CDSC-tenellus_contig992 6054..6335 +
1680790207.3202736-CDS-C-tenellus_contig992:6784..68681680790207.3202736-CDS-C-tenellus_contig992:6784..6868Choristocarpus tenellus KU2346CDSC-tenellus_contig992 6785..6868 +
1680790207.3322744-CDS-C-tenellus_contig992:7091..72231680790207.3322744-CDS-C-tenellus_contig992:7091..7223Choristocarpus tenellus KU2346CDSC-tenellus_contig992 7092..7223 +
1680790207.341437-CDS-C-tenellus_contig992:7614..77341680790207.341437-CDS-C-tenellus_contig992:7614..7734Choristocarpus tenellus KU2346CDSC-tenellus_contig992 7615..7734 +
1680790207.3560138-CDS-C-tenellus_contig992:8081..82371680790207.3560138-CDS-C-tenellus_contig992:8081..8237Choristocarpus tenellus KU2346CDSC-tenellus_contig992 8082..8237 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-tenellus_contig992.2.2

>prot_C-tenellus_contig992.2.2 ID=prot_C-tenellus_contig992.2.2|Name=mRNA_C-tenellus_contig992.2.2|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=258bp
MMFRLLPSVQDSPTITQIFHSNKTILPVLQMCKMKVPFCVDACLESHLEV
DEDYIHDDFNMTGLATMVPYYEYALDMILDVEMPVGQTLTEEQQEVVENA
AEMLYGLIHARYILTSRGMQGMFEKFHMGTFGRCPRVYCQGQSVLPVGLS
DVPRSCTVAVYCPKCQDIFHPKSTRQANIDGAYFGTTFPHLFLLAHPDLI
PARQSQTYVSRIYGFKIHSSSVYHKNNKEGGGNSDGTARTSRRRTSVKKE
KSRHAAR*
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mRNA from alignment at C-tenellus_contig992:4973..9599+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-tenellus_contig992.2.2 ID=mRNA_C-tenellus_contig992.2.2|Name=mRNA_C-tenellus_contig992.2.2|organism=Choristocarpus tenellus KU2346|type=mRNA|length=4627bp|location=Sequence derived from alignment at C-tenellus_contig992:4973..9599+ (Choristocarpus tenellus KU2346)
AGGATCAGGAAATACTCTGGAGGAAGGAGGTGAAAGTGATGAGAGGGAAC
TAACGGCAAGTGCAGACCTGGAGGACAGCAGGTAGGTGCATCAACAAAAA
ACATCAATGACACACCAAGTATATATCAAAACGCCTCTTTGAGTGCGATG
TTCTATGTACTATTTATTATTATTTATTAGCATGTCATGTCTTGTCATTG
AAGTCACCACGCCAAACTCCTATATTGCATTTGGAATGATGTGCTCCTTT
TGGTTCAGTAATTCTCTTATATCACCATTGTGAGCAATTCTTCCTCTGGG
AAAAGAATTATGGCAGTTGGTATTAATAGAGATATTTTTATATTATGCTG
AAAAGATAGGTGTAGTTCGATTGTTTACTTGGAGAGGATCTTACTACTGG
AAGACAGTAGCTCGATAGGTTTTGGTGGCATGTTCCTTACCTACCTCTTG
CCTTGTTTTATTTTTTTTGTAAGTTCCAAGAATGTGCTGCACGTCTGCTG
AATTTTTGTTTTCTTTCTTTGTGATTGTCTCCTTTCACGTTAGTGTTATT
GATCCTATTAATTGGTGACTGTTGCCACTTGTATGTCTATGACTTGAGTG
CCTTACATACTTATGGAGGGTTGTTGATTGTTGATTGTTGCCCTTCCTTA
TGTTGCTCTGTGCTTCTTTCCTCAATCTTATGAGCAGTGAATTATCAGCC
TCAGAGGAAGACAGCTCATGGATTTCATGGTTTGTCACCTTGAGAGGAAA
TGAATTCTTCTGTGAGGTACGTAATTGCATGGGACACTTTCATTACACAC
TTCAGATATCCTTCATATTATAATAGTGCAGATTGAAGTTTGGATGTTGT
ACAGGATAGGAGCAGGTGCTGAATAAAATATGAAATCACTATTGTGTAAG
GATGCAACTTTAAGGAAATGTCATGCACAGGTATTAGTGAGCTTGAAATG
GGATGAGTAATTTTATCAGGGATATTGAAGTGGAGGACAAGTCAGATTGG
AGCTGGTTATAGAGTGTTGGGGGTATATGTATGTAAGGCTTTTTGCAGTG
GTGCAAAACACTTGTATTTTTTGTTTGTTGAATGATGTTCAGGTTGTTGC
CATCAGTTCAAGACTCACCAACAATCACTCAAATCTTTCATAGCAACAAG
ACAATCCTCCCAGTTTTACAAATGTGCAAAATGAAAGTGCCTTTTTGTGT
TGATGCTTGCTTGGAATCACACCTGGAGGTTGATGAGGACTACATTCACG
ATGACTTCAACATGACTGGTCTAGCTACAATGGTGCCTTACTATGAGTAT
GCGTTGGATATGATCCTTGATGTGGAGATGCCTGTGGGACAGACTCTTAC
AGAGGAGCAGCAGGTGAAGCAGCCTTGAAGAAAATAGTATTGGAATCAAA
AATGCAGGGTCAGTACATTTATGCATATGTGTAATGAGTGCGAGTTAATC
GGATATGCTATCGTGGTCACAAGTTAGCTATTTATGCATCTAATTGATGC
AATTGATGTATGGTTGAGACACCCTATCCTCACGTTATGATGTTTTATCA
CTTTGCTTTGAGTATTGCCACCTTGATTTTTAGCAATTTTGATTAAAAGA
TTCCACTACCCACACTCTGGCACATGTGGCATGTGACATGTGATCTTATG
GCGTAGCTGTATGGTGTTAGTCTGATCTTAAAACTCTTTGGGGTGTTGTG
TTGCAATTTTTTTTTCTGTTTTATTCCATGATTGCAGCAAAATTAATCTT
GCTCCCATGTCCAACTCAAACCTTCCTCAAATTATTACATTTTTTGTGTT
AAATGTGCTCAGGAGGTGGTGGAGAATGCTGCAGAAATGTTATATGGGCT
AATACACGCCCGCTATATCCTCACCAGCCGGGGAATGCAAGGGATGGTAA
GAATACCTTAGCTTTCTAACTTTCTATTGTAATTTGTATAATGGCCGTTG
AGTGAATATGTTTCCACCTGTCAAATGGTGGAAAGACATTGTTGGACCTT
TCCATGCCATTTCTAGAGACTGTAAATCAGCTCAAGCATGACATATGAAT
GCCAGATTACATCACTGATGGAATGACACCTGTTCCTCCTCCCCACTCCC
TTCTGTTTGTTGTGTAAAGTTTGAAAAATTCCACATGGGAACCTTTGGGC
GATGCCCTAGAGTTTATTGTCAAGGGCAGAGTGTTTTGCCTGTGGGACTT
TCAGATGTCCCACGTAGCTGCACAGTGGCTGTTTATTGCCCTAAGTGTCA
GGTAAGTGGTCAGGCTACATTGATTGACTTGTGGTGAAGATTTTCTGTTA
TTAATAGGGATCAGTGGGGTTTGAAGCGATGTGGAGGCGGTGTATGGTAG
TATCACTTGCGTAGGTTATGAAGCACTCAATCCTTGACTCATTGATTAGG
TTGATGGATCATTTTCCAGGTGTTTGAGGGTGGATTCTTGGTTTTAGGTA
CAGACTATAGACTACAGCGAGAGCTTGGAGAACCACTGACCCTGTTGTTA
TTTCTTAGATGTAGTGTATGTTTTACTAAATATCAATGAACTTCTGTTTC
TTTGGAGGATGACTCCTCCCTGTATTTTAATTCATTGAACTGTAGCATGC
ACCATGGTAACTTTGATGCACTTGATTGTCTGTTGCTCACAGGACATTTT
CCACCCCAAGAGCACAAGACAGGCCAATATTGATGGTGCATACTTCGGAA
CAACATTTCCACATCTTTTTCTTCTGGCTCATCCAGACCTCATACCTGCC
CGACAGAGTCAGGTATGGCTTTCATTGCGCAATGTATTGCAATATGTAGG
CAGAACTCTATTGTCAAATTAAGTGATCCATGCGTTGAACAATTGGTGCA
CTTTTTGCACTTGAATCTACCTTACTTGGCTAAACAAAGGTTGCAGTCAG
TTAGAGAGAGGTGAGGATTGTAGTGCTCCTTTTTGTTTTGAACAGGCAGT
GTGTTTGTTTTGCTCTGTTGTTTCAGTTGCCCTCAATGGTCATATTTGTA
TTGCGTCAGCATCAAAGCATCAAAGCTATGACTCCTCAAGTCTCTCCACC
ATCTGACCTCACCGCCCTCACTCTCCTAAATCCGATTGTTTGGATTAAAA
AAAACGCAGACTTACGTCTCCAGGATATATGGATTCAAGATCCACTCCTC
CAGTGTTTACCACAAAAATAATAAGGAAGGTGGTGGCAACAGTGATGGTA
CGGCACGTACATCACGACGGCGAACAAGTGTTAAGAAAGAGAAGTCACGC
CATGCTGCTCGCTGACAAGACTGAAATGGTTAGTGAGAAGTGAATCCCTT
ACCTGTGTACAGCCCTTCTGCTACAGCAATGTTATGGCTCATAGATGGCT
GGTGGTCTAGTGATTGTACTGGCCATTGTACTACAATACAGGTTGTAGGC
TTTTACAAGGTATGACTGGAGGTCAGGCCTTTGGCCATGGTGTTGGAAGT
TGTCAGTGGAAGGTCTGCAGGGTGACTTTCACCTTTCTGAAACAACAATT
TTTTGGGAGGGTATTGGGAGTATTGTTGGAGTCCCAACTCTACTATGGTA
ATTGGAAGGTGGAGTATTCCATGGCACAGACAAACTTTGTGAAGTTGTAT
GCATGCATGGCAATTGTAGGGTTGTGAGGTGTGTGGCAGTGTGTCTTACG
TCTGATGGGGTTGTCTTGGTAAGTGCAAGTACCCTGTTGGAAAACTTAGG
TGGGATGTGACGGCGATGTGATAGTCATGTCAGTGCAAGTGGACCTGCGG
CCTTTGTTGTAAATGTTAGTGATGCTTGTGAGCGGTCGTGCCACTAGAAA
GGCTGAAGCCAACTGAGGCTGCTTCCAAGTCTGAGCCAAGTCTAAGAGGG
AGCTTACAAAGCACAAAATAGTTGGATTGTGAACGGTTGTTTATGGACCA
GATAGCCCAGAGAAGCAAAGCGATAGAGAGCCAGCCGCCTTTTGACAACC
TACCTCTACTTCTTGGATTTATGAGGTTCAACAACAGTTTCCGAAAGGCG
CTGTCAAGAACTGACTTGTGTGCTTCTCTTCTCTCAGCTGCACCTCTGCA
GTTGTGATACCCTGCTGACAATATCTTCACTGCTGCATTCAAGAGCAAGA
TACTTGGTTCACATCCATGCCTACAGCTTGATGCTACTGCTATATATGTA
GCTCTTGTGGTGTTCTGTCTTGATCCTCCTCTCACTAAACACTAAACACT
AAACACTGTTCCTGTTCAAACACTTTCGAGGGCTTCAATGTAGATGCGAC
GCTTTTCTGGTTTGAGGTAGTAGTTCTTGATGCCCATCGCCTATTGTGAA
ACAATGCAATGGAGTAACTGTTACTTAGCATGATGTTTGTAGTAGCTCAT
GTGGGTAAGGGTAGGGAGTAAGTTTGGATGATGAAGTGTAAACAATGCAA
GTCAGAGGCTAGGGTTTGTTCTCTCTTGATTGAAATGCTGGAACAGAGGG
TTGGTCATTGAGGTGTCAACACTCTTGGTGGGGAGTACATTCAACTTGTC
ATTTGGCATTTCATTTGTTGAAATTCAGTGTGAAGTTTTTTATGTCACTT
GCTCTCTCTGTGCAATGCAAGAGAAATTCTAGGTATAGGTGGTCATTTTA
AACTTTCTGTCAATTATTTGAGTAGAG
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Coding sequence (CDS) from alignment at C-tenellus_contig992:4973..9599+

>mRNA_C-tenellus_contig992.2.2 ID=mRNA_C-tenellus_contig992.2.2|Name=mRNA_C-tenellus_contig992.2.2|organism=Choristocarpus tenellus KU2346|type=CDS|length=774bp|location=Sequence derived from alignment at C-tenellus_contig992:4973..9599+ (Choristocarpus tenellus KU2346)
ATGATGTTCAGGTTGTTGCCATCAGTTCAAGACTCACCAACAATCACTCA
AATCTTTCATAGCAACAAGACAATCCTCCCAGTTTTACAAATGTGCAAAA
TGAAAGTGCCTTTTTGTGTTGATGCTTGCTTGGAATCACACCTGGAGGTT
GATGAGGACTACATTCACGATGACTTCAACATGACTGGTCTAGCTACAAT
GGTGCCTTACTATGAGTATGCGTTGGATATGATCCTTGATGTGGAGATGC
CTGTGGGACAGACTCTTACAGAGGAGCAGCAGGAGGTGGTGGAGAATGCT
GCAGAAATGTTATATGGGCTAATACACGCCCGCTATATCCTCACCAGCCG
GGGAATGCAAGGGATGTTTGAAAAATTCCACATGGGAACCTTTGGGCGAT
GCCCTAGAGTTTATTGTCAAGGGCAGAGTGTTTTGCCTGTGGGACTTTCA
GATGTCCCACGTAGCTGCACAGTGGCTGTTTATTGCCCTAAGTGTCAGGA
CATTTTCCACCCCAAGAGCACAAGACAGGCCAATATTGATGGTGCATACT
TCGGAACAACATTTCCACATCTTTTTCTTCTGGCTCATCCAGACCTCATA
CCTGCCCGACAGAGTCAGACTTACGTCTCCAGGATATATGGATTCAAGAT
CCACTCCTCCAGTGTTTACCACAAAAATAATAAGGAAGGTGGTGGCAACA
GTGATGGTACGGCACGTACATCACGACGGCGAACAAGTGTTAAGAAAGAG
AAGTCACGCCATGCTGCTCGCTGA
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