prot_C-tenellus_contig9839.1.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig9839.1.1
Unique Nameprot_C-tenellus_contig9839.1.1
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length42
Homology
BLAST of mRNA_C-tenellus_contig9839.1.1 vs. uniprot
Match: A0A6H5JRL3_9PHAE (C2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRL3_9PHAE)

HSP 1 Score: 72.8 bits (177), Expect = 6.920e-14
Identity = 33/42 (78.57%), Postives = 36/42 (85.71%), Query Frame = 0
Query:    1 RYLSHGQEWSEKYQLKDRTRSIKYTLSPKWDEEFTLPVRRYG 42
            RYLSHGQEWSE+ +LKDRTR IK TL+P WDEEF LPVRR G
Sbjct:   20 RYLSHGQEWSERLRLKDRTRIIKTTLNPVWDEEFCLPVRRAG 61          
BLAST of mRNA_C-tenellus_contig9839.1.1 vs. uniprot
Match: D7FQN3_ECTSI (C2 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQN3_ECTSI)

HSP 1 Score: 65.9 bits (159), Expect = 8.600e-12
Identity = 27/42 (64.29%), Postives = 37/42 (88.10%), Query Frame = 0
Query:    1 RYLSHGQEWSEKYQLKDRTRSIKYTLSPKWDEEFTLPVRRYG 42
            RYLSHGQEWSE  +++++TR IK++L+P W+EEF+LPVRR G
Sbjct:  113 RYLSHGQEWSEPLRVREKTRVIKFSLNPVWNEEFSLPVRRAG 154          
BLAST of mRNA_C-tenellus_contig9839.1.1 vs. uniprot
Match: D7G4V0_ECTSI (Protein kinase C, beta 1, like n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4V0_ECTSI)

HSP 1 Score: 66.2 bits (160), Expect = 1.400e-11
Identity = 29/42 (69.05%), Postives = 36/42 (85.71%), Query Frame = 0
Query:    1 RYLSHGQEWSEKYQLKDRTRSIKYTLSPKWDEEFTLPVRRYG 42
            RYLS GQEWSE+ ++ DRTR+IKYTL+P W+E F+LPVRR G
Sbjct:  101 RYLSTGQEWSERLRICDRTRTIKYTLNPVWNETFSLPVRRAG 142          
BLAST of mRNA_C-tenellus_contig9839.1.1 vs. uniprot
Match: A0A6H5JW30_9PHAE (C2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JW30_9PHAE)

HSP 1 Score: 65.9 bits (159), Expect = 1.910e-11
Identity = 28/42 (66.67%), Postives = 36/42 (85.71%), Query Frame = 0
Query:    1 RYLSHGQEWSEKYQLKDRTRSIKYTLSPKWDEEFTLPVRRYG 42
            RYLS GQEWSE+ ++ DRTR+IKYTL+P W+E F+LP+RR G
Sbjct:  101 RYLSTGQEWSERLRICDRTRTIKYTLNPVWNETFSLPIRRAG 142          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig9839.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5JRL3_9PHAE6.920e-1478.57C2 domain-containing protein n=1 Tax=Ectocarpus sp... [more]
D7FQN3_ECTSI8.600e-1264.29C2 domain-containing protein n=1 Tax=Ectocarpus si... [more]
D7G4V0_ECTSI1.400e-1169.05Protein kinase C, beta 1, like n=1 Tax=Ectocarpus ... [more]
A0A6H5JW30_9PHAE1.910e-1166.67C2 domain-containing protein n=1 Tax=Ectocarpus sp... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR035892C2 domain superfamilyGENE3D2.60.40.150C2 domaincoord: 3..41
e-value: 5.1E-5
score: 25.2
IPR035892C2 domain superfamilySUPERFAMILY49562C2 domain (Calcium/lipid-binding domain, CaLB)coord: 12..40
NoneNo IPR availableCDDcd00030C2coord: 18..38
e-value: 5.24938E-5
score: 34.7351

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig9839contigC-tenellus_contig9839:592..717 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig9839.1.1mRNA_C-tenellus_contig9839.1.1Choristocarpus tenellus KU2346mRNAC-tenellus_contig9839 592..717 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig9839.1.1 ID=prot_C-tenellus_contig9839.1.1|Name=mRNA_C-tenellus_contig9839.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=42bp
RYLSHGQEWSEKYQLKDRTRSIKYTLSPKWDEEFTLPVRRYG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR035892C2_domain_sf