Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 0 |
| Start | 1 |
| Model size | 2593 |
| Hectar predicted targeting category | other localisation |
| Exons | 3 |
| Cds size | 2262 |
Relationships
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1680790203.745824-UTR-C-tenellus_contig9837:1819..1900 | 1680790203.745824-UTR-C-tenellus_contig9837:1819..1900 | Choristocarpus tenellus KU2346 | UTR | C-tenellus_contig9837 1820..1900 + |
| 1680790203.7620022-UTR-C-tenellus_contig9837:2380..2630 | 1680790203.7620022-UTR-C-tenellus_contig9837:2380..2630 | Choristocarpus tenellus KU2346 | UTR | C-tenellus_contig9837 2381..2630 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1680790203.7777488-CDS-C-tenellus_contig9837:2630..4283 | 1680790203.7777488-CDS-C-tenellus_contig9837:2630..4283 | Choristocarpus tenellus KU2346 | CDS | C-tenellus_contig9837 2631..4283 + |
| 1680790203.7935584-CDS-C-tenellus_contig9837:4528..5137 | 1680790203.7935584-CDS-C-tenellus_contig9837:4528..5137 | Choristocarpus tenellus KU2346 | CDS | C-tenellus_contig9837 4529..5137 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig9837.3.1 >prot_C-tenellus_contig9837.3.1 ID=prot_C-tenellus_contig9837.3.1|Name=mRNA_C-tenellus_contig9837.3.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=754bp
MSPPTLHPPSDFGKENRIDVSFNMSRAIKADTIEGTQQGTTSKTSEPLRS
VKNLGAPQRHRVGLAPRSSSRPKTRRPSSPLQQGLSNEARRVPMASLPLK
LNVDELLPRRYDSRTVRSGNGADVAGVGSFSIYDSAALGETNSSAKKTHG
PLSSSPSVVKSQPLAHTAGQTPATKHTHVTTRRKADVLSGTSVRKRQREA
VMGESSLPQQSPRGSPTSSTTRMATTPAQVMETSEISTSLVALSAQTVKG
VSVPSSRGFGEGDSWASLQISGGPRRHRVVSPPRGPTGDISHILSWKPEI
KSKVKPEPTLTKSAGSSTSGHTTTDSSSTSTSSPTFPPKLSSSSLLSWKT
QEQRQGQLQHPQSRIKRDGGVENASEKAEGDLRQQQPSSSGALGSAKNQS
SAMDLSASVASSSLLHTLVAEAGTTSAAIDEVAGTAFGLTASKARYASKV
PTKATATVADKGTRTSMKTRSVQMMPSPKRRMRRLGGPLRVQKRTKNDGD
GESDAMEEEDHDREVLSSMPNPLAAPHLQREGEGESGSGITREEGQEKYN
QDERLPFNTSINGTVSAPPLAAAAAPPVEAQVQGSKRRTELRRRGLPATA
DDIRRRQGWGDGEEEKEKESIMPDASHGIGAHAGEKESDSEDISFTVPAV
PQAWHHRQQGEVPFRRRAGISGDISSDAGEVGAVSPVVDHPPLSLATGVS
LGGYRRVEEGVLPSLPSLSAVVVSGDDGVVPSSSECTVSKKAKVSSEEYF
HNPE back to topmRNA from alignment at C-tenellus_contig9837:1820..5137+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_C-tenellus_contig9837.3.1 ID=mRNA_C-tenellus_contig9837.3.1|Name=mRNA_C-tenellus_contig9837.3.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=3318bp|location=Sequence derived from alignment at C-tenellus_contig9837:1820..5137+ (Choristocarpus tenellus KU2346)
ATACGATCGAGGTATGGCCCACTCTCCAGCCCATCCGCGACCCTAATCCT
CCTTCTCCATATCTCTGCGTCGCCCATGCAACTGCTCGATGGGTGCATAT
CAAGAAATTTTTGATCTGTTGCGTTACTTTGAAATAGGCAGGTTATGTTC
TACCTCCTCACTCCCTACGACCTTGGAAATCGATCTCTACCAACAGTCTA
GAAGTCGGCTGTTGACAGAGCAAGGCAGTCACAGTCGGAGTCCCGTCTAA
AGTTTCGGGAACTCTATGGGATTCCCACGCTGGATGAGTATCTATTTCTA
CGAATTAAATCTTCCATCTCCTCTGGGTAGTTGTCCCTGTCGAGAAGGCA
ACAACATCTCTGCAATAACACCTGTTTTTTTGGGGTGTGTAGTACTTTCA
AAATCAAAAAGGTTTGTGTAGGAATTGAGAGGATTATTTGACGGTTTGAC
AATTTCAATAAATTTAGAGCCATGATACCAGTCCCTCACTACTTTTATAT
ATTGTACTAGTGTTGTTTGAGGTTCCGCCTCTGCCAACCCTTCACCCCGG
TGGCGTTGTACCTGGGTGGTGGCTTTGTACTGTCTAGGGACCGGGTAAGC
GGGAGTTAGTCGTCTGGGTCGTCCGGCATACTCATCTTGCACGTGATAGA
CGAGAGTGAGGGTTCTTGATCAAGGCTTGGTCCTGGTATTGTCTACTGGA
AGAGTTGCTTAATTCGTCGGCAACCCAGGGGAATCTCCCCATCCGACGGC
AAGACCATCCGATTTCGAGCGAGTTTTTTGGGGTCTACTTCATCGAGTGG
GCTTGTGGAACATGTCCCCACCAACCCTCCACCCTCCCAGCGACTTCGGA
AAAGAGAATCGTATCGATGTCTCCTTCAACATGTCTAGAGCAATAAAAGC
CGACACAATCGAGGGAACGCAACAGGGTACTACCTCTAAAACCTCTGAGC
CATTAAGGTCGGTTAAAAATCTAGGGGCACCGCAACGTCACCGCGTAGGT
CTGGCGCCCCGTTCTTCATCCCGACCGAAAACAAGGAGGCCTTCGAGCCC
CCTGCAACAAGGATTATCGAACGAGGCACGACGGGTGCCAATGGCCTCCC
TCCCCCTTAAACTTAATGTAGACGAGCTACTTCCCCGGAGATATGACTCC
CGCACTGTCAGAAGTGGCAATGGTGCTGATGTCGCGGGCGTGGGGAGCTT
CAGTATCTATGACAGCGCTGCCCTTGGGGAGACGAATTCTAGTGCAAAGA
AAACTCATGGACCTCTTTCATCATCTCCTTCTGTCGTAAAATCTCAACCC
TTGGCCCACACTGCCGGGCAAACCCCTGCGACAAAACACACACACGTGAC
CACCCGAAGAAAGGCAGACGTGCTATCTGGTACATCCGTCAGGAAAAGGC
AGCGGGAAGCTGTGATGGGCGAATCGTCACTCCCTCAACAATCCCCCCGT
GGCAGTCCTACTTCCAGCACGACAAGGATGGCAACCACACCTGCACAGGT
GATGGAAACCTCAGAAATATCTACCTCTTTGGTTGCGCTTTCAGCTCAGA
CAGTTAAGGGAGTGTCAGTACCGTCTTCTAGGGGATTTGGTGAGGGCGAC
TCATGGGCTTCACTGCAGATTTCTGGGGGACCCCGTAGGCACCGTGTGGT
ATCTCCTCCTAGAGGCCCAACAGGGGACATCTCTCATATCCTCTCCTGGA
AGCCGGAGATTAAATCCAAGGTCAAGCCTGAGCCGACCTTAACAAAGAGT
GCTGGGTCCAGCACTTCTGGTCATACCACTACTGACTCTAGTAGCACCTC
TACCTCGAGCCCTACTTTCCCTCCCAAACTCTCGTCTTCCTCTCTCCTGA
GTTGGAAGACGCAGGAACAGAGGCAGGGGCAGCTTCAACATCCCCAGTCA
CGAATAAAAAGGGATGGGGGAGTGGAGAATGCATCTGAGAAAGCAGAAGG
AGACCTGCGTCAACAACAACCTTCAAGCTCAGGGGCATTGGGTTCAGCAA
AGAATCAAAGCTCTGCAATGGATCTCTCGGCCTCTGTTGCCTCCTCATCT
TTGCTGCATACACTAGTGGCAGAAGCTGGTACAACCTCTGCAGCCATTGA
TGAGGTTGCTGGTACTGCTTTTGGTTTGACTGCTTCTAAAGCAAGATATG
CTTCCAAAGTGCCAACAAAGGCTACAGCAACAGTGGCAGATAAGGGAACC
AGAACATCAATGAAGACAAGGTCTGTACAAATGATGCCCTCGCCGAAGAG
GCGCATGAGGCGACTGGGGGGCCCGCTTCGTGTCCAGAAAAGGACAAAGA
ATGATGGCGATGGAGAGAGCGATGCGATGGAGGAGGAGGATCATGACAGA
GAGGTGTTGTCCTCTATGCCTAATCCTCTTGCTGCGCCTCACCTTCAAAG
AGAGGGAGAAGGAGAGAGTGGGAGTGGCATTACAAGGGAGGAGGGACAAG
AGAAGTACAATCAGGTAGTGTGCAAGTTGAGAAGCGCACTCAACATCCAT
CTCGTATCCATCTGTTGATATTCTTGTGGGTCTATTTGTGCTTTCCATCT
TTTTTCGGCTATAGGTCTCGACATATCTTTTATCGAAGATTCAAAAACGT
TTAAAACCAATCACTCCTGTATTGTTTGTTTATCCCATAGTTCTATTGAT
GATTGTGTACATCCTTGCACTGTTGCTCCTCCTCCTCCTCCTCCTCCTCT
CCCACAAAGGATGAACGCTTACCATTCAACACAAGCATTAATGGGACTGT
CTCAGCACCCCCCTTGGCAGCAGCTGCTGCACCTCCTGTGGAGGCACAAG
TCCAGGGATCAAAGAGAAGGACTGAACTTAGGAGAAGAGGGCTGCCCGCC
ACTGCAGATGACATACGAAGGCGGCAGGGGTGGGGCGATGGGGAGGAGGA
GAAGGAGAAAGAGTCCATTATGCCTGATGCGTCTCATGGCATTGGAGCCC
ATGCAGGAGAAAAGGAAAGTGACAGTGAAGACATTAGCTTCACGGTCCCA
GCAGTGCCGCAGGCTTGGCATCATCGGCAGCAGGGAGAGGTACCGTTCCG
ACGACGGGCTGGAATTTCCGGGGATATTTCCTCTGATGCTGGAGAAGTGG
GAGCTGTGTCACCGGTGGTGGATCATCCTCCATTATCGTTGGCTACGGGA
GTGTCGTTGGGCGGCTACAGGAGGGTTGAGGAAGGCGTGTTGCCGTCGCT
GCCTTCTCTGTCTGCTGTTGTTGTTTCGGGGGATGATGGTGTTGTTCCTT
CTTCATCAGAGTGTACTGTGAGCAAGAAGGCGAAAGTCTCCTCAGAAGAA
TATTTCCACAACCCCGAG back to topCoding sequence (CDS) from alignment at C-tenellus_contig9837:1820..5137+ >mRNA_C-tenellus_contig9837.3.1 ID=mRNA_C-tenellus_contig9837.3.1|Name=mRNA_C-tenellus_contig9837.3.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=2262bp|location=Sequence derived from alignment at C-tenellus_contig9837:1820..5137+ (Choristocarpus tenellus KU2346)
ATGTCCCCACCAACCCTCCACCCTCCCAGCGACTTCGGAAAAGAGAATCG
TATCGATGTCTCCTTCAACATGTCTAGAGCAATAAAAGCCGACACAATCG
AGGGAACGCAACAGGGTACTACCTCTAAAACCTCTGAGCCATTAAGGTCG
GTTAAAAATCTAGGGGCACCGCAACGTCACCGCGTAGGTCTGGCGCCCCG
TTCTTCATCCCGACCGAAAACAAGGAGGCCTTCGAGCCCCCTGCAACAAG
GATTATCGAACGAGGCACGACGGGTGCCAATGGCCTCCCTCCCCCTTAAA
CTTAATGTAGACGAGCTACTTCCCCGGAGATATGACTCCCGCACTGTCAG
AAGTGGCAATGGTGCTGATGTCGCGGGCGTGGGGAGCTTCAGTATCTATG
ACAGCGCTGCCCTTGGGGAGACGAATTCTAGTGCAAAGAAAACTCATGGA
CCTCTTTCATCATCTCCTTCTGTCGTAAAATCTCAACCCTTGGCCCACAC
TGCCGGGCAAACCCCTGCGACAAAACACACACACGTGACCACCCGAAGAA
AGGCAGACGTGCTATCTGGTACATCCGTCAGGAAAAGGCAGCGGGAAGCT
GTGATGGGCGAATCGTCACTCCCTCAACAATCCCCCCGTGGCAGTCCTAC
TTCCAGCACGACAAGGATGGCAACCACACCTGCACAGGTGATGGAAACCT
CAGAAATATCTACCTCTTTGGTTGCGCTTTCAGCTCAGACAGTTAAGGGA
GTGTCAGTACCGTCTTCTAGGGGATTTGGTGAGGGCGACTCATGGGCTTC
ACTGCAGATTTCTGGGGGACCCCGTAGGCACCGTGTGGTATCTCCTCCTA
GAGGCCCAACAGGGGACATCTCTCATATCCTCTCCTGGAAGCCGGAGATT
AAATCCAAGGTCAAGCCTGAGCCGACCTTAACAAAGAGTGCTGGGTCCAG
CACTTCTGGTCATACCACTACTGACTCTAGTAGCACCTCTACCTCGAGCC
CTACTTTCCCTCCCAAACTCTCGTCTTCCTCTCTCCTGAGTTGGAAGACG
CAGGAACAGAGGCAGGGGCAGCTTCAACATCCCCAGTCACGAATAAAAAG
GGATGGGGGAGTGGAGAATGCATCTGAGAAAGCAGAAGGAGACCTGCGTC
AACAACAACCTTCAAGCTCAGGGGCATTGGGTTCAGCAAAGAATCAAAGC
TCTGCAATGGATCTCTCGGCCTCTGTTGCCTCCTCATCTTTGCTGCATAC
ACTAGTGGCAGAAGCTGGTACAACCTCTGCAGCCATTGATGAGGTTGCTG
GTACTGCTTTTGGTTTGACTGCTTCTAAAGCAAGATATGCTTCCAAAGTG
CCAACAAAGGCTACAGCAACAGTGGCAGATAAGGGAACCAGAACATCAAT
GAAGACAAGGTCTGTACAAATGATGCCCTCGCCGAAGAGGCGCATGAGGC
GACTGGGGGGCCCGCTTCGTGTCCAGAAAAGGACAAAGAATGATGGCGAT
GGAGAGAGCGATGCGATGGAGGAGGAGGATCATGACAGAGAGGTGTTGTC
CTCTATGCCTAATCCTCTTGCTGCGCCTCACCTTCAAAGAGAGGGAGAAG
GAGAGAGTGGGAGTGGCATTACAAGGGAGGAGGGACAAGAGAAGTACAAT
CAGGATGAACGCTTACCATTCAACACAAGCATTAATGGGACTGTCTCAGC
ACCCCCCTTGGCAGCAGCTGCTGCACCTCCTGTGGAGGCACAAGTCCAGG
GATCAAAGAGAAGGACTGAACTTAGGAGAAGAGGGCTGCCCGCCACTGCA
GATGACATACGAAGGCGGCAGGGGTGGGGCGATGGGGAGGAGGAGAAGGA
GAAAGAGTCCATTATGCCTGATGCGTCTCATGGCATTGGAGCCCATGCAG
GAGAAAAGGAAAGTGACAGTGAAGACATTAGCTTCACGGTCCCAGCAGTG
CCGCAGGCTTGGCATCATCGGCAGCAGGGAGAGGTACCGTTCCGACGACG
GGCTGGAATTTCCGGGGATATTTCCTCTGATGCTGGAGAAGTGGGAGCTG
TGTCACCGGTGGTGGATCATCCTCCATTATCGTTGGCTACGGGAGTGTCG
TTGGGCGGCTACAGGAGGGTTGAGGAAGGCGTGTTGCCGTCGCTGCCTTC
TCTGTCTGCTGTTGTTGTTTCGGGGGATGATGGTGTTGTTCCTTCTTCAT
CAGAGTGTACTGTGAGCAAGAAGGCGAAAGTCTCCTCAGAAGAATATTTC
CACAACCCCGAG back to top
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