prot_C-tenellus_contig9832.1.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig9832.1.1
Unique Nameprot_C-tenellus_contig9832.1.1
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length126
Homology
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BLAST of mRNA_C-tenellus_contig9832.1.1 vs. uniprot
Match: D8LKP7_ECTSI (Wu:fa96e12 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKP7_ECTSI)

HSP 1 Score: 101 bits (251), Expect = 2.200e-22
Identity = 59/119 (49.58%), Postives = 76/119 (63.87%), Query Frame = 0 
Query:    6 AGGNSKATTLKKHALPAMEAILREVARYTASVGESERSTLDHFLRLWLGTLEGNHPSKEDTVVALTGLASFSCAAMVLCSRDEAANIMHRLCVCLDSTLGRLQGLGITPDEEEEEEEGS 124
            AGG S    LKKHALPA+EA LREVARYTAS   + + TLD     +L  LEG  PS E+  VAL GLA+ S AA  L S  +AA++  RL VCLD+  G+L  +G   ++ +EE+ G+
Sbjct:  331 AGGRSSRLKLKKHALPAIEATLREVARYTAS-RPANKDTLDKLEGTFLKLLEGAKPSAEEVTVALAGLAALSPAATALSSYQDAADVADRLLVCLDAARGQLDEVGFAGEDSDEEDGGN 448
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig9832.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LKP7_ECTSI2.200e-2249.58Wu:fa96e12 n=1 Tax=Ectocarpus siliculosus TaxID=28... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig9832contigC-tenellus_contig9832:789..3874 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig9832.1.1mRNA_C-tenellus_contig9832.1.1Choristocarpus tenellus KU2346mRNAC-tenellus_contig9832 789..3875 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig9832.1.1 ID=prot_C-tenellus_contig9832.1.1|Name=mRNA_C-tenellus_contig9832.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=126bp
VLKCVAGGNSKATTLKKHALPAMEAILREVARYTASVGESERSTLDHFLR
LWLGTLEGNHPSKEDTVVALTGLASFSCAAMVLCSRDEAANIMHRLCVCL
DSTLGRLQGLGITPDEEEEEEEGSYG
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