prot_C-tenellus_contig9823.1.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig9823.1.1
Unique Nameprot_C-tenellus_contig9823.1.1
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length90
Homology
BLAST of mRNA_C-tenellus_contig9823.1.1 vs. uniprot
Match: D8LTL2_ECTSI (EF-hand domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTL2_ECTSI)

HSP 1 Score: 119 bits (297), Expect = 3.250e-29
Identity = 56/88 (63.64%), Postives = 65/88 (73.86%), Query Frame = 0
Query:    1 MTVSCRRVTIWDGKYGHAKATFHANDLFGLPESDITSCCLDQQGHKLVVGSDTGMIRLCFSHNGSLIRNLDPHTGLVNWLSFSSHKTD 88
            +TVS RRVTIWD K G A  T  +  L G  ++DIT+   D QGHKLVVG+DTG IR CFSH+GS+IR LDPH G VNWLSF+S KTD
Sbjct:  479 VTVSARRVTIWDAKSGEALTTLTSERLLGNDQADITAFSSDHQGHKLVVGADTGEIRACFSHSGSVIRQLDPHNGPVNWLSFASRKTD 566          
BLAST of mRNA_C-tenellus_contig9823.1.1 vs. uniprot
Match: A0A2P6NPU2_9EUKA (EF-hand domain-containing protein n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6NPU2_9EUKA)

HSP 1 Score: 63.9 bits (154), Expect = 6.890e-10
Identity = 33/87 (37.93%), Postives = 50/87 (57.47%), Query Frame = 0
Query:    1 MTVSCRRVTIWDGKYGHAKATFHANDLFGLPESDITSCCLDQQGHKLVVGSDTGMIRLCFSHNGSLIRNLDPHTGLVNWLSFSSHKT 87
            +T S R + IWD K G    TF +     + +  +TS CLDQ+  K++VG+  G I++    NGSL+R LDPHT  V+ +    ++T
Sbjct:  553 LTASGREIKIWDAKNGTVLQTFPS-----ISDHKMTSVCLDQRQRKIIVGTTKGDIKMFNYSNGSLLRELDPHTSEVSAVLCGPNRT 634          
BLAST of mRNA_C-tenellus_contig9823.1.1 vs. uniprot
Match: G4YZI3_PHYSP (EF-hand domain-containing protein n=6 Tax=Phytophthora TaxID=4783 RepID=G4YZI3_PHYSP)

HSP 1 Score: 51.2 bits (121), Expect = 2.060e-5
Identity = 28/87 (32.18%), Postives = 47/87 (54.02%), Query Frame = 0
Query:    7 RVTIWDGKYGHAKATFHANDLFGL-----PESD------ITSCCLDQQGHKLVVGSDTGMIRLCFSHNGSLIRNLDPHTGLVNWLSF 82
            ++ +W G  G    T+    + G      PES       IT+ C+D +  K++VG DTG I++  + NG++++ LDPHT  V  +S+
Sbjct:  505 KLLLWRGDTGALWKTYEYAAILGSTQTADPESREAHARAITAVCVDDRERKIIVGDDTGSIKVVNAVNGNVMKELDPHTECVVSVSY 591          
BLAST of mRNA_C-tenellus_contig9823.1.1 vs. uniprot
Match: H3HBA9_PHYRM (EF-hand domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3HBA9_PHYRM)

HSP 1 Score: 49.7 bits (117), Expect = 7.140e-5
Identity = 20/48 (41.67%), Postives = 34/48 (70.83%), Query Frame = 0
Query:   35 ITSCCLDQQGHKLVVGSDTGMIRLCFSHNGSLIRNLDPHTGLVNWLSF 82
            IT+ C+D +  K++VG DTG I++  + NG++++ LDPHT  V  +S+
Sbjct:  867 ITAVCVDDRERKVIVGDDTGSIKVLNAVNGNVMKELDPHTNCVVGVSY 914          
BLAST of mRNA_C-tenellus_contig9823.1.1 vs. uniprot
Match: A0A0W8DTG1_PHYNI (EF-hand domain-containing protein n=1 Tax=Phytophthora nicotianae TaxID=4790 RepID=A0A0W8DTG1_PHYNI)

HSP 1 Score: 49.3 bits (116), Expect = 9.680e-5
Identity = 20/48 (41.67%), Postives = 34/48 (70.83%), Query Frame = 0
Query:   35 ITSCCLDQQGHKLVVGSDTGMIRLCFSHNGSLIRNLDPHTGLVNWLSF 82
            IT+ C+D +  K++VG DTG I++  + NG++++ LDPHT  V  +S+
Sbjct:  561 ITAVCVDDRERKIIVGDDTGSIKVVNAVNGNVMKELDPHTNCVVDVSY 608          
BLAST of mRNA_C-tenellus_contig9823.1.1 vs. uniprot
Match: W2Q8H9_PHYPN (EF-hand domain-containing protein n=8 Tax=Phytophthora TaxID=4783 RepID=W2Q8H9_PHYPN)

HSP 1 Score: 49.3 bits (116), Expect = 9.850e-5
Identity = 20/48 (41.67%), Postives = 34/48 (70.83%), Query Frame = 0
Query:   35 ITSCCLDQQGHKLVVGSDTGMIRLCFSHNGSLIRNLDPHTGLVNWLSF 82
            IT+ C+D +  K++VG DTG I++  + NG++++ LDPHT  V  +S+
Sbjct:  561 ITAVCVDDRERKIIVGDDTGSIKVVNAVNGNVMKELDPHTNCVVDVSY 608          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig9823.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D8LTL2_ECTSI3.250e-2963.64EF-hand domain-containing protein n=1 Tax=Ectocarp... [more]
A0A2P6NPU2_9EUKA6.890e-1037.93EF-hand domain-containing protein n=1 Tax=Planopro... [more]
G4YZI3_PHYSP2.060e-532.18EF-hand domain-containing protein n=6 Tax=Phytopht... [more]
H3HBA9_PHYRM7.140e-541.67EF-hand domain-containing protein n=1 Tax=Phytopht... [more]
A0A0W8DTG1_PHYNI9.680e-541.67EF-hand domain-containing protein n=1 Tax=Phytopht... [more]
W2Q8H9_PHYPN9.850e-541.67EF-hand domain-containing protein n=8 Tax=Phytopht... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 2..89
e-value: 1.7E-9
score: 39.1
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 5..84

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig9823contigC-tenellus_contig9823:3958..5218 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig9823.1.1mRNA_C-tenellus_contig9823.1.1Choristocarpus tenellus KU2346mRNAC-tenellus_contig9823 3946..5218 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig9823.1.1 ID=prot_C-tenellus_contig9823.1.1|Name=mRNA_C-tenellus_contig9823.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=90bp
MTVSCRRVTIWDGKYGHAKATFHANDLFGLPESDITSCCLDQQGHKLVVG
SDTGMIRLCFSHNGSLIRNLDPHTGLVNWLSFSSHKTDK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR036322WD40_repeat_dom_sf