mRNA_C-tenellus_contig980.4.2 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig980.4.2 vs. uniprot
Match: A0A6H5J860_9PHAE (SUN domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J860_9PHAE) HSP 1 Score: 149 bits (376), Expect = 6.890e-35 Identity = 67/132 (50.76%), Postives = 92/132 (69.70%), Query Frame = 1 Query: 595 LGPPSSVLSEDTRLSSCWAMKGNSGLVTIRLTADIAVHGVSIEHTSRHVALDMSSAPRQFEVYGLRDADDSHPVTLGVGEYIKEGKAVQFFEFEPVGRKYPMVTFNIRSNWGNSDYTCIYRLRVHGEE*EAS 990 +GP SV+SE + L +CWAM G+ GLVTI+L I V GVS+EH SR V + SAP++ EV+G+R+ D++P LG Y +G+ +Q F EP+G ++ ++ F I SNWGN DYTC+YRLRVHG E E+S Sbjct: 406 VGPVESVISEGSSLGACWAMSGSEGLVTIQLPEKITVDGVSVEHVSRMVTTESGSAPKEIEVWGMRNKKDNNPAKLGSAVYDVDGRPIQTFPIEPLGVQFKLIQFKILSNWGNPDYTCLYRLRVHGRERESS 537
BLAST of mRNA_C-tenellus_contig980.4.2 vs. uniprot
Match: D7FIC3_ECTSI (SUN domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIC3_ECTSI) HSP 1 Score: 141 bits (356), Expect = 4.840e-33 Identity = 63/126 (50.00%), Postives = 84/126 (66.67%), Query Frame = 1 Query: 595 LGPPSSVLSEDTRLSSCWAMKGNSGLVTIRLTADIAVHGVSIEHTSRHVALDMSSAPRQFEVYGLRDADDSHPVTLGVGEYIKEGKAVQFFEFEPVGRKYPMVTFNIRSNWGNSDYTCIYRLRVHG 972 +GP SV+SE + L +CWAM G+ GLVTI+L I V GVS+EH SR V + SAP++ EV+G+++ D P LG Y +G+ +Q F EP G + ++ F I SNWGN DYTC+YRLRVHG Sbjct: 286 VGPVESVISEGSSLGACWAMSGSEGLVTIQLPKKITVDGVSVEHVSRMVTTESGSAPKELEVWGMKNKKDKKPAKLGSAVYDVDGRPIQTFRIEPPGEQIELIQFKILSNWGNPDYTCLYRLRVHG 411
BLAST of mRNA_C-tenellus_contig980.4.2 vs. uniprot
Match: UPI001C2052DC (SUN domain-containing protein 2-like n=1 Tax=Aricia agestis TaxID=91739 RepID=UPI001C2052DC) HSP 1 Score: 123 bits (309), Expect = 1.430e-27 Identity = 64/133 (48.12%), Postives = 81/133 (60.90%), Query Frame = 1 Query: 580 VYRGRLGPPSSVLSEDTRLSSCWAMKGNSGLVTIRLTADIAVHGVSIEHTSRHVAL--DMSSAPRQFEVYGLRDADDSHPVTLGVGEYIKEGKAVQFFEFEPVGRKYPMVTFNIRSNWGNSDYTCIYRLRVHG 972 V RG +G +++L T CWA K SG TIRL A + V GVS+EH H++ D+SSAPRQF V GL+D +D HP G EY K+G Q+FE P + Y +V I SNWG+ YTC+YR RVHG Sbjct: 157 VSRGCVGA-TTMLQPGTLPGECWAFKTGSGEATIRLIATVQVAGVSLEHIPAHISPRGDISSAPRQFVVQGLKDLNDPHPFEFGSFEYDKDGPPNQYFEVRPTTKGYNLVRLKIVSNWGHPVYTCVYRFRVHG 288
BLAST of mRNA_C-tenellus_contig980.4.2 vs. uniprot
Match: UPI001E280234 (SUN domain-containing protein 3-like n=2 Tax=Coliadinae TaxID=42450 RepID=UPI001E280234) HSP 1 Score: 118 bits (295), Expect = 7.900e-26 Identity = 58/126 (46.03%), Postives = 81/126 (64.29%), Query Frame = 1 Query: 607 SSVLSEDTRLSSCWAMKGNSGLVTIRLTADIAVHGVSIEHTSRHVA--LDMSSAPRQFEVYGLRDADDSHPVTLGVGEYIKEGKAVQFFEFE-PVGRKYPMVTFNIRSNWGNSDYTCIYRLRVHGE 975 ++++ T CWA +G+ G VTIRL + V GVS+EH H++ ++SSAPR F++ GL +D +P G EY KEGK +QFFE + P + Y +V I SNWG+S YTC+YR+RVHGE Sbjct: 161 TAIIRPGTLPGECWAFRGSKGEVTIRLLDSVHVTGVSLEHIPPHISPTKEISSAPRLFQLEGLEFRNDPYPHDFGSFEYDKEGKPIQFFEVQAPSAKPYNLVRLRIFSNWGHSVYTCVYRVRVHGE 286
BLAST of mRNA_C-tenellus_contig980.4.2 vs. uniprot
Match: A0A194RHD8_PAPMA (SUN domain-containing protein 3 n=4 Tax=Papilio TaxID=7145 RepID=A0A194RHD8_PAPMA) HSP 1 Score: 117 bits (294), Expect = 1.410e-25 Identity = 57/126 (45.24%), Postives = 79/126 (62.70%), Query Frame = 1 Query: 607 SSVLSEDTRLSSCWAMKGNSGLVTIRLTADIAVHGVSIEHTSRHVA--LDMSSAPRQFEVYGLRDADDSHPVTLGVGEYIKEGKAVQFFEFE-PVGRKYPMVTFNIRSNWGNSDYTCIYRLRVHGE 975 S++L T CWA +G+ G VTIRL + V G+SIEH H++ ++SSAPR F++ GL D HP G EY K+GK +Q+FE + P Y +V + SNWG+S YTC+YR+R+HGE Sbjct: 162 SAILRPGTLPGECWAFRGSRGEVTIRLVGSVHVTGMSIEHIPAHISPTKEISSAPRLFQLEGLSHRGDPHPHDFGSFEYDKDGKPIQYFEVQHPASAAYLVVRLKVFSNWGHSLYTCLYRVRIHGE 287
BLAST of mRNA_C-tenellus_contig980.4.2 vs. uniprot
Match: UPI001E68AE88 (SUN domain-containing protein 1-like n=1 Tax=Maniola jurtina TaxID=191418 RepID=UPI001E68AE88) HSP 1 Score: 116 bits (290), Expect = 5.220e-25 Identity = 55/126 (43.65%), Postives = 79/126 (62.70%), Query Frame = 1 Query: 607 SSVLSEDTRLSSCWAMKGNSGLVTIRLTADIAVHGVSIEHTSRHVA--LDMSSAPRQFEVYGLRDADDSHPVTLGVGEYIKEGKAVQFFE-FEPVGRKYPMVTFNIRSNWGNSDYTCIYRLRVHGE 975 SS++ T CWA +G+ G TIRL + VHGVS+EH H++ ++SSAPR F++ GL D + G+ EY K+GK VQ+FE P + + +V I +NWG+S YTC+YR+R+HGE Sbjct: 163 SSIIRPGTLPGECWAFRGSRGEATIRLLGTVHVHGVSLEHIPPHISPTREISSAPRSFQLEGLEFRGDPYGHDFGIFEYNKDGKPVQYFEVLHPSSKGFSLVRLKIYTNWGHSVYTCVYRVRIHGE 288
BLAST of mRNA_C-tenellus_contig980.4.2 vs. uniprot
Match: H9IUH4_BOMMO (SUN domain-containing protein n=1 Tax=Bombyx mori TaxID=7091 RepID=H9IUH4_BOMMO) HSP 1 Score: 112 bits (281), Expect = 1.580e-24 Identity = 54/126 (42.86%), Postives = 76/126 (60.32%), Query Frame = 1 Query: 607 SSVLSEDTRLSSCWAMKGNSGLVTIRLTADIAVHGVSIEHTSRHVA--LDMSSAPRQFEVYGLRDADDSHPVTLGVGEYIKEGKAVQFFE-FEPVGRKYPMVTFNIRSNWGNSDYTCIYRLRVHGE 975 S+++ T CWA KG+ G IRL + V GVS+EH H++ ++SSAPR F+V GL D +P G EY KEGK +Q+FE P + Y ++ + +NWG+ YTC+YR+RVHGE Sbjct: 90 SAMIRPGTLPGECWAFKGSKGQAMIRLLGTVKVMGVSVEHIPAHISPTREISSAPRLFQVEGLEYRSDPYPHDFGTVEYDKEGKPIQYFEVLYPSTKGYSLIRIRVLTNWGHPVYTCVYRVRVHGE 215
BLAST of mRNA_C-tenellus_contig980.4.2 vs. uniprot
Match: UPI001E270908 (SUN domain-containing protein 3-like n=1 Tax=Melitaea cinxia TaxID=113334 RepID=UPI001E270908) HSP 1 Score: 114 bits (284), Expect = 3.090e-24 Identity = 51/126 (40.48%), Postives = 79/126 (62.70%), Query Frame = 1 Query: 607 SSVLSEDTRLSSCWAMKGNSGLVTIRLTADIAVHGVSIEHTSRHVA--LDMSSAPRQFEVYGLRDADDSHPVTLGVGEYIKEGKAVQFFE-FEPVGRKYPMVTFNIRSNWGNSDYTCIYRLRVHGE 975 +++++ T CWA KG+ G TI+L + V GVS+EH H++ ++SSAPR F++ GL D +P G EY ++GK +Q+F+ P + Y ++ I SNWGNS YTC+YR+R+HG+ Sbjct: 162 NAIITPGTLPGECWAFKGSRGEATIKLLGTVLVTGVSLEHIPPHISPTREISSAPRLFQIEGLEYRSDPYPHDFGTFEYDRDGKPIQYFDVMHPAQKGYDLIRVKIYSNWGNSVYTCVYRVRIHGD 287
BLAST of mRNA_C-tenellus_contig980.4.2 vs. uniprot
Match: UPI00156969CC (SUN domain-containing protein 1-like n=1 Tax=Aphantopus hyperantus TaxID=2795564 RepID=UPI00156969CC) HSP 1 Score: 114 bits (284), Expect = 3.350e-24 Identity = 55/126 (43.65%), Postives = 78/126 (61.90%), Query Frame = 1 Query: 607 SSVLSEDTRLSSCWAMKGNSGLVTIRLTADIAVHGVSIEHTSRHVA--LDMSSAPRQFEVYGLRDADDSHPVTLGVGEYIKEGKAVQFFE-FEPVGRKYPMVTFNIRSNWGNSDYTCIYRLRVHGE 975 SS++ T CWA +G+ G TIRL ++ VHGVS+EH H++ ++SSAPR F++ GL D + G EY +GK +Q+FE P + + MV I +NWG+S YTC+YR+RVHGE Sbjct: 164 SSMIRPGTLPGECWAFRGSRGEATIRLLGNVHVHGVSLEHIPPHISPTREISSAPRSFQLEGLEFRGDPYGHDFGTFEYNMDGKPIQYFEVLNPSSKGFSMVRLKIYTNWGHSVYTCVYRVRVHGE 289
BLAST of mRNA_C-tenellus_contig980.4.2 vs. uniprot
Match: A0A8J9UBB3_9NEOP ((lesser marbled fritillary) hypothetical protein n=1 Tax=Brenthis ino TaxID=405034 RepID=A0A8J9UBB3_9NEOP) HSP 1 Score: 113 bits (283), Expect = 4.120e-24 Identity = 53/125 (42.40%), Postives = 79/125 (63.20%), Query Frame = 1 Query: 610 SVLSEDTRLSSCWAMKGNSGLVTIRLTADIAVHGVSIEHTSRHVA--LDMSSAPRQFEVYGLRDADDSHPVTLGVGEYIKEGKAVQFFEFEPVGRK-YPMVTFNIRSNWGNSDYTCIYRLRVHGE 975 +++ T CWA KG+ G TIRL + + GVS+EH S H++ ++SSAPR F++ GL+ D++P G EY K+GK +Q+FE +K + +V I SNWG+ YTC+YR+R+HGE Sbjct: 163 TIIRPGTLPGECWAFKGSRGEATIRLLGTVHISGVSLEHISPHISPTREISSAPRLFQIEGLKYRRDAYPHDFGTFEYDKDGKPIQYFEVLNTSQKGFNVVRLKIHSNWGHPVYTCVYRIRIHGE 287 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig980.4.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig980.4.2 >prot_C-tenellus_contig980.4.2 ID=prot_C-tenellus_contig980.4.2|Name=mRNA_C-tenellus_contig980.4.2|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=159bp MGECLLPCCLYRATFLFRGIGSCGTVYRGRLGPPSSVLSEDTRLSSCWAMback to top mRNA from alignment at C-tenellus_contig980:9851..15515- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig980.4.2 ID=mRNA_C-tenellus_contig980.4.2|Name=mRNA_C-tenellus_contig980.4.2|organism=Choristocarpus tenellus KU2346|type=mRNA|length=5665bp|location=Sequence derived from alignment at C-tenellus_contig980:9851..15515- (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig980:9851..15515- >mRNA_C-tenellus_contig980.4.2 ID=mRNA_C-tenellus_contig980.4.2|Name=mRNA_C-tenellus_contig980.4.2|organism=Choristocarpus tenellus KU2346|type=CDS|length=477bp|location=Sequence derived from alignment at C-tenellus_contig980:9851..15515- (Choristocarpus tenellus KU2346)back to top |