prot_C-tenellus_contig980.1.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig980.1.1
Unique Nameprot_C-tenellus_contig980.1.1
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length456
Homology
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BLAST of mRNA_C-tenellus_contig980.1.1 vs. uniprot
Match: D7FID3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FID3_ECTSI)

HSP 1 Score: 77.4 bits (189), Expect = 1.600e-11
Identity = 67/205 (32.68%), Postives = 102/205 (49.76%), Query Frame = 0 
Query:  255 KSPPTPRAVDGLFSPMWVHLPPKSIFTIHHSPRRAPPPSSQTKAKWETDSGCSSTSLRSAGGDVGPSPRPRGVSSAKDSSSVLSSAMNKREQSSSMGLTEEC--PFSFASGTVTEE--IWGKMMQVQAHRDRYLRQVAEMVQDEQRQDSQRNKELRRVSKFPQRCERLRLRQKHERQERRTMINRIRRDIELIMVQETSRLGLIR 455
            + P TPR+     SP WV  P +         +      S   A W        T+   +GGD     +      + +  S  SS + KRE +  +  +E+    FS A+GT  E+  +   M+Q Q  RDRY  Q+ +++ DE  +++ R   L +    P R  RL+L+ + ERQE+RT+IN IR+D ELI+VQ+ + LGLIR
Sbjct:  360 QEPATPRSTKRAMSPFWVPPPQEPPLRCRELAKMT----SALAAGWP-----GGTAENESGGDDRGGGKSGNSCPSLEGGSHKSSPVRKRESNWPIESSEDAMATFSSAAGTAQEDERVRRTMLQAQEMRDRYFSQIRQIIMDECAEEACRAAALEKAGGHPLRSRRLQLQHERERQEKRTLINWIRKDTELIVVQKMAALGLIR 555
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BLAST of mRNA_C-tenellus_contig980.1.1 vs. uniprot
Match: A0A6H5KZ56_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZ56_9PHAE)

HSP 1 Score: 61.2 bits (147), Expect = 2.400e-6
Identity = 72/219 (32.88%), Postives = 106/219 (48.40%), Query Frame = 0 
Query:  239 GQDSSNSVTEFSSDIV-----KSPPTPRAVDGLFSPMWVHLPPKSIFTIHHSPRRAPPPSSQTKAKWETDSGCSSTSLRSAGGDVGPSPRPRGVSSAKDSSSVL------SSAMNKREQSSSMGLTEEC--PFSFASGTVTEE--IWGKMMQVQAHRDRYLRQVAEMVQDEQRQDSQRNKELRRVSKFPQRCERLRLRQKHERQERRTMINRIRRDIEL 442
            G  S  S   F++D++     + PPTPR+   + SP WV             P + PP   +  AK         TS  +AG   G +      S   DSS  L      SS + KRE    +  +++    FS A+GTV E+  +   M+Q Q  RDRY RQ   M++DE  +++ R   L +    P R +RL+L+ + ERQE+RT+IN IR+D E+
Sbjct:  358 GSGSGASSVTFATDMLNHPSHQEPPTPRSTKRVMSPFWV------------PPPQEPPLLCREIAKM--------TSALAAGWPGGTA---ENESRGNDSSLSLGRGRYKSSPIRKREGKWPLESSDDAMATFSSAAGTVQEDERVRRTMLQAQEMRDRYFRQ---MIKDECAEEACRAAALAKAGGHPLRSKRLQLQHERERQEKRTLINWIRKDTEV 550
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig980.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FID3_ECTSI1.600e-1132.68Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KZ56_9PHAE2.400e-632.88Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 288..315
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 282..350
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 327..350

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig980contigC-tenellus_contig980:5811..9583 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig980.1.1mRNA_C-tenellus_contig980.1.1Choristocarpus tenellus KU2346mRNAC-tenellus_contig980 5631..9724 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig980.1.1 ID=prot_C-tenellus_contig980.1.1|Name=mRNA_C-tenellus_contig980.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=456bp
MLYAVTTLSRYVVFLPGLQCHQRNRETYTLARALLVHRISNASRWDTAKT
PTQGRPESCAILSGRNMGHGTTSGILQAVESASNLTLEDTFPPNSGTPAS
SQHYRSTNIHPEAPFEASELRYARGKGGTFSWGRLCDAESGVTLELSRPV
WKCMIVQDPSSQSLANDKETKSWNAEENVLDDSEQCLEQCVMGEGDRREC
GENRFPAIVTHPTTFGDGIGSNSEYFTDGQASKTNFTCGQDSSNSVTEFS
SDIVKSPPTPRAVDGLFSPMWVHLPPKSIFTIHHSPRRAPPPSSQTKAKW
ETDSGCSSTSLRSAGGDVGPSPRPRGVSSAKDSSSVLSSAMNKREQSSSM
GLTEECPFSFASGTVTEEIWGKMMQVQAHRDRYLRQVAEMVQDEQRQDSQ
RNKELRRVSKFPQRCERLRLRQKHERQERRTMINRIRRDIELIMVQETSR
LGLIR*
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