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Homology
BLAST of mRNA_C-tenellus_contig98.1.3 vs. uniprot
Match: D8LBC7_ECTSI (tRNA Pseudouridine Synthase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LBC7_ECTSI) HSP 1 Score: 283 bits (725), Expect = 7.610e-79 Identity = 181/428 (42.29%), Postives = 256/428 (59.81%), Query Frame = 1
Query: 1426 KIICLRMSYVEGKEKETIAAINRHLPEDIKVVDMRRVPKGFDAKQACSRRRYEYFMPTAMLAATDHVAGLYDEARQW----AQDNESSQPSNMN--ADNAAEEGGGSEVEQREKKIASVAETSRSAVIAPSGSNLPSTSDLSASEPGEGSSGAGICQGTAGVSVASVSEESAEK-----VTVSGLDGAKTITPEEDAS-EDNSG------EGGGDLDVWVSRRPPSV------VAGRVSESLRKYRVTAELLDSLRRVLGCFKGTKNYHNYTSRRKANDPSCSRYIISFVSSDPWTAEDGSEWIRLTVVGQSFLLHQIRKMVATAVDLVRRASSPGDFDMSFSLAKLNLNIAPSEGLYLDRPFFDTYNRILKK-EDKDRVLEWESGPEAEELEEFKRAKIHQHILSQEQSEHNFVAWLDVIGSNPCVY 2634
++I ++++Y+ E+ET+ IN++LP+DI+ VD+RR PK FD++ CS RRYEY MPT +LA +V L++ A +W A +SS ++ AD +A GG +V+ + S + A A SG+ LPS + G+ +G+ + AS+ +A + V + DGA + D +D+ G EG GD R +V V RV+E L+ YR+ + L+ LR L F GTKNYHNYT+ +KA D SC R I SF +SDP+ E G EWIRLTV GQSF++HQIRKMVA+ VD VR S+P DF SF K+NL IAPS+GLYL+RP ++ YN+ +K+ + DR+LEWE+GP AE LE+FK+ KIH IL++EQ++++FVAWLD I PC Y
Sbjct: 258 QVISVKLTYLNDGERETVEKINKYLPDDIRAVDIRRAPKSFDSRTRCSGRRYEYIMPTYVLAPKAYVTDLFETALEWEMAHAGGGDSSAVDDLGETADISAVAGGSIQVDAAQLAAGSPPPEAAQAENASSGAVLPSAGAV-------GTEASGLTDAADAAAAASMETPAAGRRQGHAVGAADDDGASEYSGRSDTEGDDDDGNSQQEYEGSGDEGKEARLRQAAVELSSPAVVQRVAEQLKGYRLKPDRLEDLRETLKGFLGTKNYHNYTNHKKATDASCKRLITSFTASDPFEHE-GMEWIRLTVGGQSFIMHQIRKMVASTVDRVRGQSNPEDFTKSFLPEKINLGIAPSDGLYLERPLYEPYNKDVKRAKAHDRLLEWETGPAAEALEDFKKNKIHAGILAKEQADYDFVAWLDRITRYPCNY 677
BLAST of mRNA_C-tenellus_contig98.1.3 vs. uniprot
Match: A0A7S2MCN9_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2MCN9_9STRA) HSP 1 Score: 180 bits (457), Expect = 2.400e-44 Identity = 154/529 (29.11%), Postives = 222/529 (41.97%), Query Frame = 1
Query: 1129 KRPKKKVAVLLAYCGTKYKGMQM*ERED*CLWMRGWMDEMRKT---RGCINEVTLTKGQWKQSWSVPCTLWAI*VVQTLAICKRLLGLELPVLTRVYMLLHRKIICLRMSYVEGKEKETIAAINRHLPEDIKVVDMRRVPKGFDAKQACSRRRYEYFMPTAMLAATDHVAGLYDEARQWAQDNESSQPSNMNADNAAEEGGGSEVEQREKKIASVAETSRSAVIAPSGSNLPSTSDLSASEPGEGSSGAGICQGTAGVSVASVSEESAEKVTVSGLDGAKTITPEEDASEDNSGEGGGDLDVWVSR-------RPPSVVAGRVSESLRKYRVTAELLDSLRRVLGCFKGTKNYHNYTSRRKANDPSCSRYIISFVSSDPWTAEDGSEWIRLTVVGQSFLLHQIRKMVATAVDLV--RRASSPGDFDMSFSLAKLNLNIAPSEGLYLDRPFFDTYN------RILKKEDKDR-------VLEWESGPEAEELEEFKRAKIHQHILSQEQSEHNFVAWLDVIGSNPCVYKP 2640
K PK+KV +L+ YCG Y GMQ+ +R E+ + G I Q K WS A + ++ +++ L+L V + + T+ IN HLP+ IKV + +V + FDAK +CS+RRY Y MP+ +L + GL D A+ G +P ++S E + +G + + ED + D+ LD V R PP + YRVT LLD R L F+GT ++HNYTS +K +DP R I S DP+ EDG EW+ +T++GQSFLLHQIRKMVATA+DL +R+ + + +F K+ L +APS GL+L RPFF+ YN R L++ D+ LEWE GP A+ + F++A I +HI QE H+F+ WL + Y P
Sbjct: 84 KIPKRKVVLLVGYCGAGYNGMQINPG------VRSIEMELERAIFRAGGIARTNFGNLQ-KVGWSR-----AARTDKGVSSVAQVVSLKLGV------------------PADSSMETTVERINSHLPKGIKVFECIKVARSFDAKNSCSKRRYRYLMPSFLLMPPELRRGLLDRAKM-------------------------------------------------GRGIP--------------------------------DKSVETLQSNGAEECEQAVASEDKTADH-------LDQPVRRAKKEQWSEPPMDSFEAAAPEAAAYRVTPNLLDGFRLALSLFEGTHHFHNYTSSKKFSDPQSQRNIHSVSCGDPFVREDGREWVVVTIMGQSFLLHQIRKMVATAIDLAHKQRSEATAAMETTFGDNKVLLPLAPSLGLFLHRPFFEPYNAHFTGDRPLRRNLDDQQGDIVRPALEWEQGPAADTMAVFEKAVIWEHIFQQENQTHDFLRWLHNLDRTGVEYTP 494
BLAST of mRNA_C-tenellus_contig98.1.3 vs. uniprot
Match: A0A7S4D790_HETAK (tRNA pseudouridine synthase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D790_HETAK) HSP 1 Score: 160 bits (404), Expect = 1.070e-40 Identity = 89/209 (42.58%), Postives = 123/209 (58.85%), Query Frame = 1
Query: 2041 PPSVVAGRV---SESLRKYRVTAELLDSLRRVLGCFKGTKNYHNYTSRRKANDPSCSRYIISFVSSDPWTAEDGSEWIRLTVVGQSFLLHQIRKMVATAVDLVRRASSPGDFDMSFSLAKLNLNIAPSEGLYLDRPFFDTYNRILKKEDKDR-------VLEWESGPEAEELEEFKRAKIHQHILSQEQSEHNFVAWLDVIGSNPCVYK 2637
PP V GRV L YR E L +L L ++GT N+HN+TSRR A D SC RYI+SF + +PW + G+EW+ LTV+GQSFLL+QIRK+VA AV + R A + G + S K L +AP +GLYLD FFD YN+ L K+ +L W+ G EE+++FK +I HI+++E+ F+ WL+ + P K
Sbjct: 9 PPPGVLGRVLGPGGPLHGYRAPPEKLAALASALAGYRGTHNFHNFTSRRAATDKSCHRYIMSFDTGEPWVDDHGTEWVCLTVLGQSFLLNQIRKLVALAVQVARGAQTRGAVRTALSKKKHCLPMAPGDGLYLDSLFFDAYNKNLAKDKNTNKSEGSRVLLLWDQGALLEEIKDFKEKQIANHIIAKEKESRPFLKWLNYLRVYPTKIK 217
BLAST of mRNA_C-tenellus_contig98.1.3 vs. uniprot
Match: A0A835YJ34_9STRA (Pseudouridine synthase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJ34_9STRA) HSP 1 Score: 169 bits (429), Expect = 5.610e-40 Identity = 145/439 (33.03%), Postives = 198/439 (45.10%), Query Frame = 1
Query: 1456 EGKEKETI-AAINRHLPEDIKVVDMRRVPKGFDAKQACSRRRYEYFMPTAMLAATDHVAGLYDEARQWAQDNESSQPSNMNADNAAEEGGGSEVEQREKKIASVAETSRSAVIAPSGS-----------------NLPSTSDLSASEPGEGSSGAGICQGTAGVSVASVSEESAEKVTVSGLDG------------------AKTITPEEDASEDNSGEGGGDLDV----------WVSRRPPSVVAGRVSESLRKYRVTAELLDSLRRVLGCFKGTKNYHNYTSRRKANDPSCSRYIISFVSSDPWTAEDGSEWIRLTVVGQSFLLHQIRKMVATAVDLVRRASSPGDFDMSFSLAKLNLNIAPSEGLYLDRPFFDTYNRILKKEDKDRVLEWESGPEAEELEEFKRAKIHQHILSQEQSEHNFVAWLDVIGSNPCVY 2634
E + E I +N HLP+ I+V+ + RV GF+AK AC+ RRY Y +PT LAA +++ GL EA+ W E+SQP + DN +V + AV+ P+ + + + S ++ PG + +A T A EG G W+S P+V+A RV+E LR +R+T E L LR VL F+GTKNYHNYT RR A DPSCSR + SF + +P+ G EW+ L+V GQSF+LHQIRKMVATAVD+VR +S D S + A + L +APS+GL+LD+ FF Y D L+ G A R +I HI+ E + F AWLD + P Y
Sbjct: 203 EAAQHEAIRTGVNAHLPDAIRVLKVARVTGGFNAKNACTGRRYAYLLPTCTLAAPEYIDGLLAEAKAW----EASQPRSA-GDNV-------DVAAXXXXXXXXXXAAPMAVVEPAENPAXXXXXXXXXXXXXXXXVTAASADQSALPGSSHGNGXXXXXXXXXXXXXXAGTNATAATXXXXXXXXXXXXXXXXXXXXXXXXAPXXXXXXXXXXXXEREGAGXXXXXXXPEGEEKRWLSS--PAVIA-RVAEKLRTFRITPEKLARLREVLALFRGTKNYHNYTIRRAATDPSCSRVMRSFTAGEPFV-RGGVEWVLLSVEGQSFMLHQIRKMVATAVDVVRAQASVEDMQRSLTQAHMILGLAPSKGLFLDKLFFSMYEERYGAADA-TSLKCREGSAAAARVTAMRDRIVSHIVDGEAAHLQFCAWLDYMSKFPKNY 624
BLAST of mRNA_C-tenellus_contig98.1.3 vs. uniprot
Match: A0A6U2S3D4_9STRA (tRNA pseudouridine synthase n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A6U2S3D4_9STRA) HSP 1 Score: 142 bits (357), Expect = 1.060e-34 Identity = 75/185 (40.54%), Postives = 118/185 (63.78%), Query Frame = 1
Query: 2071 ESLRKYRVTAELLDSLRRVLGCFKGTKNYHNYTSRRKANDPSCSRYIISFVSSDPWTAEDGSEWIRLTVVGQSFLLHQIRKMVATAVDLVRRASSPGDFDMSFSLAKLNLNIAPSEGLYLDRPFFDTYNRILKKEDKDRVLEW-----ESGPEAEELEEFKRAKIHQHILSQEQSEHNFVAWLDV 2610
+ L KYRV ++ L+ LR L ++GT +YHNYT+ + ++D S RY++SF++ DP E G+EWI VVGQSFLLHQIRKMV A ++ R A+ F+ +F+ K+ AP++GL+LD +FD YN + + ++ +L W +S A+ +EFK + +H++++E +E NFV +L V
Sbjct: 1 DQLSKYRVPSDRLEKLRAALKRYEGTHSYHNYTNGKTSDDKSAKRYMMSFIALDPVVDEFGTEWIPTQVVGQSFLLHQIRKMVCMATEVARGATDMDAFESTFTNIKIPTATAPAQGLFLDMSYFDAYNNDKRHQIENPIL-WHQTDDKSNLAAQRTQEFKEQVVMKHVMAEEAAEANFVKFLFV 184
BLAST of mRNA_C-tenellus_contig98.1.3 vs. uniprot
Match: UPI00138FA692 (tRNA pseudouridine synthase A isoform X1 n=1 Tax=Nematostella vectensis TaxID=45351 RepID=UPI00138FA692) HSP 1 Score: 143 bits (361), Expect = 1.840e-32 Identity = 76/193 (39.38%), Postives = 116/193 (60.10%), Query Frame = 1
Query: 2044 PSVVAGRVSESLRKYRVTAELLDSLRRVLGCFKGTKNYHNYTSRRKANDPSCSRYIISFVSSDPWTAEDGSEWIRLTVVGQSFLLHQIRKMVATAVDLVRRASSPGDFDMSFSLAKLNLNIAPSEGLYLDRPFFDTYNRILKKEDKDRVLEWESGPEAEELEEFKRAKIHQHILSQEQSEHNFVAWLDVIGSN 2622
P+ + +S YR+TAE ++ + + L +KGTKNYHN+TS +K DPS +RYIISF P+ +G E++ LTV GQSF+LHQIRKM+ + +VR + FD+ ++ K+++ AP+ GL LD FD YN+ + L+W+ E E+ +FK IH+HI+ E EH + WL+ + S+
Sbjct: 183 PTFAFAKDYQSTVGYRITAEKIEEINKALSNYKGTKNYHNFTSGKKFEDPSANRYIISFKCGKPFE-RNGREFVVLTVKGQSFVLHQIRKMIGLVIAVVRGVAPSSTFDLVWAKKKIDIPKAPALGLVLDTVHFDAYNKKFGNDGLHEPLDWQLINE--EVYKFKEDFIHKHIIDTETKEHTMMRWLNTLSSH 372
BLAST of mRNA_C-tenellus_contig98.1.3 vs. uniprot
Match: A0A136JBQ4_9PEZI (Pseudouridine synthase n=1 Tax=Microdochium bolleyi TaxID=196109 RepID=A0A136JBQ4_9PEZI) HSP 1 Score: 141 bits (355), Expect = 2.010e-31 Identity = 143/520 (27.50%), Postives = 234/520 (45.00%), Query Frame = 1
Query: 1093 LQHVRAEVVEMSKRPKKKVAVLLAYCGTKYKGMQM*ERED*CLWMRGWMDEMRKTRGCINEVTLTKGQWKQSWSVPCTLWAI*VVQTLAICKRLLGLELPVLTRVYMLLHRKIICLRMSYVEGKEKETIAAINRHLPEDIKVVDMRRVPKGFDAKQACSRRRYEYFMPTAMLAATDHVAGLYDEARQWAQDNESSQPSNMNADNAAEEGGGSEVEQREKK--IASVAETSRSAVIAP-----------------SGSNLPSTSDLSASEPGEGSSGAGICQGTAGVSVASVSEESAEKVTVSGLDGAKTITPEEDASEDNSGEGGGDLDVWVSRRPPSVVAGRVSESLRKYRVTAELLDSLRRVLGCFKGTKNYHNYTSRRKANDPSCSRYIISFVSSDPWTAEDGSEWIRLTVVGQSFLLHQIRKMVATAVDLVRRASSP-GDFDMSFSLAKLNLNIAPSEGLYLDRPFFDTYNRILKKEDKDRVLEWESGPEAEELEEFKRAKIHQHILSQEQSEHNF 2592
+Q AE+ +RPK+KVAVL+ Y GT Y G+Q+ +E + G + I + ++S V C + + ++ L+L + ++ + +A IN HLP I+V + R F + Q+C R YEY MP+ L + L + Q+A++N + + A G EVE+ + + + S+ +T R AV+A + + P + S+P E +GA +G A V S + + + AK + P +D + R + +A + R+YRV+ E L L+ L + GT+NYHNYT ++ +DPS R I SF + + ++W+ L V GQSF++HQIRKMV AV LV R +P D S+ A++++ AP GL L+RP FD+YN K D + + G E+++FK +I+Q I E+ +++F
Sbjct: 3 IQFSEAEIAAEERRPKRKVAVLIGYAGTGYHGLQINHKEK---TIEGDIFAAFVAAKAIAKTNADDP--RKSSFVRCAR----TDKGVHAAGNMVSLKLII----------------------EDPDIVAKINEHLPPQIRVWGITRTNNAFSSYQSCDSRWYEYLMPSYCLLPPHMHSFLGKKVAQFAKENGYEEELGKRLHDVA--GFWEEVEKNDIQPIMDSLDDTGREAVLAKLHAVREGLVGEDGAEFKAKKDQPVAESVEESKPAE-QTGAVTTEGAA-PEVKSDEDTQMTAAADTTAEPAKVVNP---------------VDAALKRINAAYIAAK-----RRYRVSPERLAQLQSALDSYVGTRNYHNYTVQKNHSDPSAKRLIKSFQLNTTPVQINDTQWLSLKVHGQSFMMHQIRKMVGMAV-LVTRCGTPLSRIDESYGPARISIPKAPGLGLLLERPVFDSYNARAK--DNYNLEPLDFGTYEAEIQKFKEEQIYQRIFELEEQQNSF 464
BLAST of mRNA_C-tenellus_contig98.1.3 vs. uniprot
Match: UPI0018CFA849 (tRNA pseudouridine synthase A n=1 Tax=Teleopsis dalmanni TaxID=139649 RepID=UPI0018CFA849) HSP 1 Score: 139 bits (349), Expect = 2.140e-31 Identity = 72/178 (40.45%), Postives = 107/178 (60.11%), Query Frame = 1
Query: 2080 RKYRVTAELLDSLRRVLGCFKGTKNYHNYTSRRKANDPSCSRYIISFVSSDPWTAEDGSEWIRLTVVGQSFLLHQIRKMVATAVDLVRRASSPGDFDMSFSLAKLNLNIAPSEGLYLDRPFFDTYNRILKKEDKDRVLEWESGPEAEELEEFKRAKIHQHILSQEQSEHNFVAWLDVI 2613
+ YR+ L+ L+ +L ++GTKN+HN+TS++ +DPS RYIISF +P+ + GSE+I+L V GQSF+LHQIRKMV A+ +VR ++ D +F+ KL+L +AP GL LD +D YN K+ L+W+ E+ EF I +I E EH+ + WLD +
Sbjct: 227 KSYRIDLNTLEKLKEILTTYEGTKNFHNFTSKKNYHDPSAKRYIISFTYLEPFLSPHGSEFIKLIVKGQSFMLHQIRKMVGLAIAIVRGNTTVSTLDRAFTQEKLDLPMAPGLGLVLDTVHYDRYNERYGKDGLHEPLDWKKYET--EINEFVEKYIDVNIYETEYKEHSMMEWLDTL 402
BLAST of mRNA_C-tenellus_contig98.1.3 vs. uniprot
Match: A0A485LLG4_9STRA (Aste57867_22670 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LLG4_9STRA) HSP 1 Score: 139 bits (350), Expect = 3.030e-31 Identity = 75/185 (40.54%), Postives = 108/185 (58.38%), Query Frame = 1
Query: 2080 RKYRVTAELLDSLRRVLGCFKGTKNYHNYTSRRKANDPSCSRYIISFVSSDPWTAEDGSEWIRLTVVGQSFLLHQIRKMVATAVDLVRRASSPGDFDMSFSLAKLNLNIAPSEGLYLDRPFFDTYNRILKKEDKDRVLEWESGPEAEELEEFKRAKIHQHILSQEQSEHNFVAWLDVIGSNPCVY 2634
+ YR+ L+ LR L F+GT N+HNYTS+ P C RYI+ F + DP+ + G+EWIRL V+GQSFLLH IRKM+ T +D++R ++ +F K++L APS GLYL + FD YN K E LE+++ + +EEFK I I+ +E++E F WL + + P Y
Sbjct: 234 KAYRIDPARLEKLRETLTIFEGTHNFHNYTSKLPPFSPKCKRYIMQFRADDPFV-KHGTEWIRLRVIGQSFLLHHIRKMIGTTMDVIRGSTDVATISKAFEQTKMDLPKAPSAGLYLAKAHFDVYND--KNESHRPSLEFDTDEQLRRIEEFKEKHIFPEIMEREETEAVFPLWLLQLEAVPFSY 415
BLAST of mRNA_C-tenellus_contig98.1.3 vs. uniprot
Match: A0A6P8IT79_ACTTE (tRNA pseudouridine synthase A-like n=1 Tax=Actinia tenebrosa TaxID=6105 RepID=A0A6P8IT79_ACTTE) HSP 1 Score: 138 bits (348), Expect = 6.450e-31 Identity = 71/193 (36.79%), Postives = 115/193 (59.59%), Query Frame = 1
Query: 2044 PSVVAGRVSESLRKYRVTAELLDSLRRVLGCFKGTKNYHNYTSRRKANDPSCSRYIISFVSSDPWTAEDGSEWIRLTVVGQSFLLHQIRKMVATAVDLVRRASSPGDFDMSFSLAKLNLNIAPSEGLYLDRPFFDTYNRILKKEDKDRVLEWESGPEAEELEEFKRAKIHQHILSQEQSEHNFVAWLDVIGSN 2622
P+ + ++ + YR+T E L + VL + GT+NYHN+TS +K DPS RYI SFV P+ + + E++ LT+ GQSF+LHQIRKM+ A+ ++R + FD+++ K+++ AP+ GL LD+ FD YN+ + LEWE E ++ +FK A IH+H++ E +H + WL+ + +
Sbjct: 221 PTFAFAKDYQTTKNYRLTDEKLAEINEVLSVYVGTRNYHNFTSGKKFEDPSAMRYIKSFVCGKPFMSNN-IEFVVLTIKGQSFVLHQIRKMIGLAIAILRGVAPRSTFDLAWLKRKVDIPKAPALGLALDKVHFDAYNKRFGSDGIHDPLEWEDAEE--DISKFKAAYIHKHMIETEMKDHTMMRWLNTLSGH 410
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 1 |
| Start | 1 |
| Seed ortholog | 157072.XP_008861008.1 |
| Preferred name | PUS1 |
| PFAMs | PseudoU_synth_1 |
| Model size | 3554 |
| Max annot lvl | 2759|Eukaryota |
| KEGG ko | ko:K06173,ko:K20674 |
| KEGG Pathway | ko04624,map04624 |
| Hectar predicted targeting category | other localisation |
| GOs | GO:0000049,GO:0000959,GO:0000963,GO:0001522,GO:0002153,GO:0003674,GO:0003676,GO:0003712,GO:0003713,GO:0003723,GO:0003727,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005667,GO:0005730,GO:0005737,GO:0005739,GO:0005759,GO:0006139,GO:0006355,GO:0006357,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009889,GO:0009891,GO:0009893,GO:0009982,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0016070,GO:0016071,GO:0016556,GO:0016853,GO:0016866,GO:0019219,GO:0019222,GO:0030374,GO:0031119,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031974,GO:0031981,GO:0032991,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043412,GO:0044237,GO:0044238,GO:0044422,GO:0044424,GO:0044428,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0045893,GO:0045935,GO:0045944,GO:0046483,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0060255,GO:0065007,GO:0070013,GO:0070525,GO:0070900,GO:0070902,GO:0071704,GO:0080090,GO:0090304,GO:0090646,GO:0097159,GO:0106029,GO:0140053,GO:0140098,GO:0140101,GO:0140110,GO:1900864,GO:1901360,GO:1901363,GO:1902680,GO:1903506,GO:1903508,GO:1990481,GO:2000112,GO:2001141 |
| Exons | 11 |
| Evalue | 3.07e-32 |
| EggNOG OGs | COG0101@1|root,KOG2553@2759|Eukaryota |
| Ec32 ortholog description | tRNA Pseudouridine Synthase |
| Ec32 ortholog | Ec-27_004410.1 |
| EC | 5.4.99.12 |
| Description | pseudouridine synthase activity |
| Cds size | 1368 |
| COG category | J |
| BRITE | ko00000,ko00001,ko01000,ko01002,ko03016 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1680790201.8095338-UTR-C-tenellus_contig98:3588..4364 | 1680790201.8095338-UTR-C-tenellus_contig98:3588..4364 | Choristocarpus tenellus KU2346 | UTR | C-tenellus_contig98 3589..4364 - |
| 1680790201.9296253-UTR-C-tenellus_contig98:11900..12034 | 1680790201.9296253-UTR-C-tenellus_contig98:11900..12034 | Choristocarpus tenellus KU2346 | UTR | C-tenellus_contig98 11901..12034 - |
| 1680790201.9393559-UTR-C-tenellus_contig98:12586..12754 | 1680790201.9393559-UTR-C-tenellus_contig98:12586..12754 | Choristocarpus tenellus KU2346 | UTR | C-tenellus_contig98 12587..12754 - |
| 1680790201.9510238-UTR-C-tenellus_contig98:14350..15458 | 1680790201.9510238-UTR-C-tenellus_contig98:14350..15458 | Choristocarpus tenellus KU2346 | UTR | C-tenellus_contig98 14351..15458 - |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1680790201.8229296-CDS-C-tenellus_contig98:4364..4394 | 1680790201.8229296-CDS-C-tenellus_contig98:4364..4394 | Choristocarpus tenellus KU2346 | CDS | C-tenellus_contig98 4365..4394 - |
| 1680790201.837462-CDS-C-tenellus_contig98:4644..4821 | 1680790201.837462-CDS-C-tenellus_contig98:4644..4821 | Choristocarpus tenellus KU2346 | CDS | C-tenellus_contig98 4645..4821 - |
| 1680790201.8513334-CDS-C-tenellus_contig98:6331..6440 | 1680790201.8513334-CDS-C-tenellus_contig98:6331..6440 | Choristocarpus tenellus KU2346 | CDS | C-tenellus_contig98 6332..6440 - |
| 1680790201.8615746-CDS-C-tenellus_contig98:7039..7185 | 1680790201.8615746-CDS-C-tenellus_contig98:7039..7185 | Choristocarpus tenellus KU2346 | CDS | C-tenellus_contig98 7040..7185 - |
| 1680790201.872872-CDS-C-tenellus_contig98:7474..7586 | 1680790201.872872-CDS-C-tenellus_contig98:7474..7586 | Choristocarpus tenellus KU2346 | CDS | C-tenellus_contig98 7475..7586 - |
| 1680790201.8830843-CDS-C-tenellus_contig98:8875..9435 | 1680790201.8830843-CDS-C-tenellus_contig98:8875..9435 | Choristocarpus tenellus KU2346 | CDS | C-tenellus_contig98 8876..9435 - |
| 1680790201.8923507-CDS-C-tenellus_contig98:10470..10608 | 1680790201.8923507-CDS-C-tenellus_contig98:10470..10608 | Choristocarpus tenellus KU2346 | CDS | C-tenellus_contig98 10471..10608 - |
| 1680790201.903248-CDS-C-tenellus_contig98:11491..11569 | 1680790201.903248-CDS-C-tenellus_contig98:11491..11569 | Choristocarpus tenellus KU2346 | CDS | C-tenellus_contig98 11492..11569 - |
| 1680790201.9191291-CDS-C-tenellus_contig98:11882..11900 | 1680790201.9191291-CDS-C-tenellus_contig98:11882..11900 | Choristocarpus tenellus KU2346 | CDS | C-tenellus_contig98 11883..11900 - |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig98.1.3 >prot_C-tenellus_contig98.1.3 ID=prot_C-tenellus_contig98.1.3|Name=mRNA_C-tenellus_contig98.1.3|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=456bp
MLLHRKIICLRMSYVEGKEKETIAAINRHLPEDIKVVDMRRVPKGFDAKQ
ACSRRRYEYFMPTAMLAATDHVAGLYDEARQWAQDNESSQPSNMNADNAA
EEGGGSEVEQREKKIASVAETSRSAVIAPSGSNLPSTSDLSASEPGEGSS
GAGICQGTAGVSVASVSEESAEKVTVSGLDGAKTITPEEDASEDNSGEGG
GDLDVWVSRRPPSVVAGRVSESLRKYRVTAELLDSLRRVLGCFKGTKNYH
NYTSRRKANDPSCSRYIISFVSSDPWTAEDGSEWIRLTVVGQSFLLHQIR
KMVATAVDLVRRASSPGDFDMSFSLAKLNLNIAPSEGLYLDRPFFDTYNR
ILKKEDKDRVLEWESGPEAEELEEFKRAKIHQHILSQEQSEHNFVAWLDV
IGSNPCVYKPKTAAPTVAANTTEGTPASESAPTPADSCSADGKTRKKETM
RQVPQ* back to topmRNA from alignment at C-tenellus_contig98:3589..15458- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_C-tenellus_contig98.1.3 ID=mRNA_C-tenellus_contig98.1.3|Name=mRNA_C-tenellus_contig98.1.3|organism=Choristocarpus tenellus KU2346|type=mRNA|length=11870bp|location=Sequence derived from alignment at C-tenellus_contig98:3589..15458- (Choristocarpus tenellus KU2346)
GTCCAGAGAGAGAGAAATGATCTCAAATACGTCATCAGTGTTTGGCGAGA
GAGTGGAATATGTGACCAGAGGAACCCATCCAACCATCTGTTGGACACAC
TTCCTCCTCAGAAGGAATCGTGGGGTCCTTGATCTACACATATTCCTTGC
CCATCTCAGCCATATCGGGGAGTCAACAGCTTTCTGGCATGTTTTTTTTC
ATGACATTTATCCTCTCCTTGAAGTGGACACTTTCCACAACCTGCTGCTG
GACAGCAAAGGTTGAAGGTGGGTTGATGAGGCATTTTATGGTCAATTGTG
ATGTCAAAGAGGATGTGGAAAACAACACCTGTGAATGGCAAAGTGCTCAA
ACCATACGGTAGAAACAATGTGAGTGTAGGCGGAACAAGATGGATTGTAA
GCCCATATTACCAAAATTGGTTGGTTGTTCATCACAGTGAAGCGGCAAAG
AAGAGTGGTCCACTCTGGTGCCTTAGTTGTGAAAGATGAGTCCATACGCC
GCTGACCACCTAACACAGGCTTTTCAATCTTCACTCCTCTTTGCTCCAAC
TCCTGAATTGCTTCCCTGTACCTGGAGGTGATTTCTTGGTTGGATCGTTG
ACTTTGAATCTCTCAACTTGATCTTGGCTTTGGAATACCTGCTGTTCTTG
ACACAGATAAGAGTTGCATTGAGCATTGTCCCCCTCGTGTACATTCAAGA
GAAGTGCCAGATGTCATTCTTCAACCAATGTGGATTTATTTTTTCCATTC
CTTTACATGCTTATCTTTCTGTTGGTCAGTCATCAGCTCAACCAGATTCG
AGTCATGTTCTTTGTCTTTTCTGACCCTTTGCCTTCCTTGTCATCATCCT
CTGCACACCAAAGGGCATATTCAGCAGATGGGTGGGTGTAATACTTATAT
GCTGAAACCTCTACCCCATCTTCAGATTAACTGGGTATACTCATGGTTTA
TGCAGTCCTAGAGGTGTTCATGGTGCATGTTTGTTTGTGTTTCTCTCCCC
TAAACATCGCAGAGAGGGAACAAAACAAGCAATCGGTATGAACATCTTTG
GTTTTTGATCAACTGCAAATGCTGTGATTCACAATACTATTACTTCAACA
CGTGAGAGGTGAGAAAGCAGTGACCAGATTTATGAGACTGAAGATCAAGT
AAAGGTGTAATTGAGTGCAAAGTTGTTTAGAGCCTATGAATGCAAGGTAC
ATGTATGAGAAGTTCATATGCAGATGTGTGTGGTGTTGGCATGAGCACAT
GTGCAAGATGAAGGACAGTACCTCTGACATGAACACCCCAGCCACAAGTT
GGGAACACACAACACACTGGAAAACACCTGATGGGATGAAATAGAGCCTG
CCCAACCTTTGAGTGTCGGGTTTGTGAAGTATTATTTTGTGGTCCGATCT
CAAAACACTGTATACGAAGTAGTTTGTAGTAATTATTTTAGTAGGAGTCA
TTGGTGCACATGCCTGAGCAGAGGTGTGAGACTGAGAGCCGGTACTGATG
AGTGATTGGTCTACACTTGGCACTTGGAATTACACAGTATGCTCATGAGT
GCGGTTGCAATACGATACTTTCAATGATGGGAATTGTGGTAGGGGCTGCT
TCATTGAATGAATAGAATCATTCTATCTCAGAGGTGGGTTATTTAGGCCT
CTTAAATACTATGCCTGACACCTCCATTTCCCAAGCCTGAAATATCACCA
AACCACCTAAGGAGGCTGTGGCTGTGGAATAGAAGACGAAATTTTGTCCA
CACTAGAACAGAATTGTCTTCAAGAATTATATAACAACGTATAGCGGAAG
GAAGTCACAGAGGCTCCAAATACTCAACAACCCTCTCCTCTTAAGATGGG
ATGACTCAAATCATTCTGACCAAATCAAGAATGGCCCACGATAATGCTGT
ATAATAGAAGGAAGAAGATAATATATTGTCCAACATACTGAAGCTTGCTC
CAATCAGAAGGAGTACATCTTCTGATTGGATACATCTGTTGCTGTTGGAC
ACAGCTGATGTTGCACAAAAACATGAACACAATGTGAAAAACTTGAGATG
GTGAAAGAGGATGCAAAAGTACATTTATTGTTGTGATTTTTTTGCATTTC
ATGAGTGAAGTGGCGTGGTGACCATGAAGAACACGGCATACTTAAATTGT
GATTAGGAACAACCCTATTCCAAGATGTGATGTTGGATGAACATCAAGCA
GTGCTTCAAGGCCCCAGCAAGCACTCTCTCTTGTTTTTGTTGCTGTAGTG
TTGGTTTCCACTTTTTAGCGCTACTGAAGGTAGACAACAAACGTGTGCTG
ATGAGTATGTGTAGCTAGAGAGTTGTGGTGAGGGCCTTAGTGCGGGGACA
GACTGTATGACAAAGACATCTCATGCAACCGAAACAGTGAAGTTTTTGCC
CCAGGCAAGAGCAGGCTGTCGATGTAAATGGAAATGAACACATATTATAG
AGCTTTATGTAGTACCAATGTAGAGTACACACTAACGCTTAACAATTAGA
GTGAGTACTTGATCCGTCTGACCCCCTTGCAAAGCATGTAGGACCTGTTT
CCTGCACTCATACTGTAGATATGATCATAGATGCAGAGTATGGACAAAGA
TACACTCAACAGTGGTGCAAACTGTCCCACGTATGTGTGGCTCCTGCCTT
GTAAGTCTTATGTCTGTGAATCAACTCTCCTGTTTTGCTGATTCGATGTC
CCAGCTGAGGTGGTGGAAATGTCGAAGAGGCCAAAGAAGAAGGTTGCGGT
GCTCCTGGCGTACTGTGGCACCAAGTACAAGGGCATGCAGATGTGAGAGA
GAGAGGATTAATGCTTGTGGATGCGTGGATGGATGGATGAAATGAGGAAG
ACAAGAGGGTGTATCAATGAAGGTGTTGATTGTTGCGTGAGCTGCTTGTT
GATTTTGTTTTTGCTCATGTGGTGGGCAGCACCTTCTTGAGTTTCCCTGG
GCGTTGTGGGATGACTTAGTGTTGTATTGGTTGCACAGCACTAGATACAA
ACCAAGCGCATTGCTGGGTGGTCCTTCTACTCGTAACTTTATATTATAGC
GGTTACGGAGCAGGTTATATTCCTGGTGTCTCTTGCTATTTTGTACTTTA
AATCCTTTCATTGCAAGGGGAAAGATCACTGTGCTTTTTTCCTCATTGTG
CACTATGAGGGAGTGCTGGGTACAGAAGCGAAGTGAATAGATTAATAGGA
ATAGGAGCAGTACTTGCACTTTACCCAAACCTGACATTTTTTGTTGTTAC
TAGTATTAATCCAGTGATACTGTTGCAGCACGGCCCCTATTGCTTTGGTT
TTGGTTTAGCCAACACCCAGAGCTCGCCTTCACTGAGTTCTGGATCTGCA
TTCACTCCCACTTCCCACTTCCCACTTCCTTCTCACCTGGCGACACCGTG
TCCCACATGTTCATTGCTCCTAAGTAACCCTAACCAAAGGACAGTGGAAG
CAGAGCTGGAGCGTGCCTTGTACCTTGTGGGCAATATAAGTCGTGCAAAC
TTTGGCAATCTGCAAAAGGTTGCTTGGTCTAGAGCTGCCCGTACTGACAA
GGGTGTACATGCTGCTGCACAGGAAAGTTTATTTTTGTTTTGCAATTGTA
ACTGTTGCTATTTTGAATGTCTGTTTAGGGGGTTTAAAAAGCTGCTGGCA
ATTCACTTTCTTAAGTCTCATTACACCACTACCAACTTTGGGCAAAGTGT
AAAGGCTCTAGGGAGGGGGGGGGGGTATTTTGTTTCATTACTCTTTTTCC
TTTTGTATTGAATGCATGCCTACTTGTGTGGAAAGGAATTTTTGTGTTGG
CTTTGATTTGTTCAGCTGGAGGCTGTTGCGGAGGGGGTGATACCTCTTTT
AACTGTGGTTCTTACTGATCTTTGGGTACCGTCCCGCAGATTATATGCTT
GCGCATGAGCTATGTGGAGGGGAAAGAGAAAGAGACCATTGCAGCAATCA
ACAGGCACCTTCCTGAGGTTAGAAATGTTGGCAGAAGGGGCAGGGAGTGG
AGGAGGGGAAGGGGTTCCCACTTTAGTTGATAGCTCTAGTGTTGGTGTTT
TTTAATGTTTGTGGTACAGCATGCTTAAGACAGATTACGCTTGAAGTGCT
TATCAACCCCTCTACATACCTCCATCTCACTGAAAGAACTATTGATACGC
CTTTGCATGTCTTCCATAAACGATATGATTCTTTGTTGCCTCATACTTAC
CCTCCTAGAAAATCAGGCAGACACAGGAAGTTCCGCATATTTTTGGTTGC
CAGTCGGTTAAACGTTTCCAATTTTTACACCCTGATGTGCATGGATGTAT
ACTCACGTGCATATTACTGCGTTTCTGTTACTGTTCTGAAAACATTCAAT
GGCAGAAGAGAACTCTTTGCTCAGAGAGAACAAGAAGATAAGACTTGCTT
GGTACCTTATTGGCCTGATGTCACTGCTGTATTACAGCAATCTTGGATGG
ACATCCTATTCCCCCTCTCTCCCTTTCGACCCAATGAGAGAGGAGATGTC
ACTCAATTCACTTGCTTATACTTCCCTCTGACGTTTTGTTGATCTTGTGC
CTGTTTGATACTGTTTAAGACAGGGTGTCGTTGAGTTTCAAGGTCCCACA
CAACTACCTTGTGGTTTATGTGTTTTGATCATGGTGGAGATCCCTTTGGG
TTAACAATCTGTTCACAGCTAGTCTTCTCTACATCAGATACACCCTCTTG
AGGGAGGTTGAGTGCGTCTGTGTCATAGGCATAGTGTATACTTCACCTAG
ATTCAAAGGTCCTTGGGACTCAAAAGGGTCAAACAAAATCAAGTCCCCCT
CTTTGATGATCTCACCCCCTTATCCCTCCCATTTTTTCCTTGTACTGCAG
GATATAAAGGTGGTCGATATGCGGCGCGTCCCCAAGGGTTTTGATGCCAA
GCAGGCGTGCAGCAGGCGTCGCTATGAGTACTTCATGCCCACAGCTATGC
TAGCAGCAACAGACCATGTAGCTGGTTTGTACGACGAGGTATATACCCCC
CCTGCTCACACCCCGCCCCAGAACTGAAAGGCCTTGTGCCATTGTCCCCC
TTGTCACTGTTTCATGAAGAGATTTATTGGTCCTTCATATTGTGAAGGGC
TGGTTGATGAGGAGATGTAGGATTTGGTCTGGGATTGGCAGAGTGGGGAT
GAGGGGAGATCATTGGTGACAGATTAGGAAAGGCAAGCTTTGAGGAACTT
GAACGATTTTTCGCCATGGAGAGCGTGCTTGGCAAGAGATGTCAGCATTA
CCATCAGCTGTCATTGTCATTCGTTAGAGGGACACAACCTTTGAAGGAAA
CTATTTGGTTGGTTATTTGTTTGGGGGAATGCAATGTTCAGTTTCATTAT
ATGTGGTGATTTTTGCCATCCCAGGTTCAGCCTCAGATGGCGAGTAGGTA
CTTGAGGTAAAGTTCCTTAACCTGCTGTTCCTGATGCATCAGACCAGCCA
ACTTTGTCCGACTCCTCTGTTTCTGTTTTTGACCTATGTTTGCATATCTG
GCTGATTCACTGCTGTTGAAGGTTAGGGTAGTACTTATGGGTGCATGTGT
GTGTGAGTGTGTGTTTATATAGTGGGGGTTCGGATCAAAGGTCACTTCTG
AGGAAAAGGGTAGAGATCTATGCGTGTCTTTACTGTGGAGCTTAGGGATG
GCATACAAGGTGCGCAACTGATGCTGTTGGCGTTTGTTGGTTTACAATAT
CTGTTAGTGTTGCAGGTCTTTATTGGCAGTATTTGTGACATGTCAATGAA
GTGAGGAATTTAGGGCGCAGCAGTGTAGGAGAGCCCTCTCATCTTGCCAG
AAGCGAAGGATGTGCACCTTGTTTGCAACATTTATGTATTATGTATTATG
TATTATGTTGTGCCCTCACACCCCCCACAATTCGCCTCTTCCCCTCGATC
TTCATTGTAGCTCATAATACCATTTATGATTGTAAACTCTTGCAGTCCAA
GTACTGTGTACTTGATGCCCTGTGTATTACCAATGTTGCCCCCCTCCTCT
CACCTCCCTGCATGATCAAGCAGGCAAGGCAATGGGCACAGGATAATGAA
TCAAGTCAACCCAGTAACATGAATGCTGACAATGCTGCAGAGGAGGGTGG
AGGAAGTGAGGTTGAGCAAAGGGAGAAAAAGATAGCTTCAGTAGCTGAAA
CCTCCAGGTCTGCTGTCATTGCACCCTCTGGTTCCAATTTGCCCAGTACT
AGTGATCTCTCGGCCTCTGAGCCAGGGGAGGGTAGCTCTGGGGCAGGGAT
ATGCCAAGGCACTGCAGGCGTTTCTGTCGCCAGTGTTTCCGAGGAGAGTG
CAGAAAAGGTCACTGTCAGTGGGTTAGATGGTGCAAAGACTATCACACCA
GAGGAGGATGCATCTGAGGACAACAGTGGGGAGGGGGGGGGTGATTTGGA
TGTTTGGGTGAGCAGGAGGCCACCTTCGGTGGTGGCTGGTCGAGTGTCAG
AGAGTTTGAGGAAGTACCGTGTCACAGCAGAGCTTTTGGATTCGCTTAGG
AGGGTCCTTGGTTGCTTTAAGGGCACCAAGAACTACCATAACTACACCAG
CCGTAGGAAGGCTAATGACCCCAGCTGCAGCAGGTTGGATTGTTTTCCTG
TTGTATCATTGTATGTGGGCATTGGTGTTTTCGGTGCCTTTTGCTTGTGC
ATGTTTACATGTTTGTTTTTTGAAAGTTTTTGGCCTTCGTTTTTATCCAT
TTTCAACTCTTTTTATGCGCTTGTTTTGTTATTGATTGGAAAGCTATTGC
CTGTTACCGGAGATGTTACTTCTCTCTGGAGGGACATTCACACTATGAAC
GAAGTAATCTGCACAGGTCCTTCCTCTCTGATCATGATCTCTTGCAGCTT
CTTTTTTGCTTTTGGTACCCACCACGAGCATGTGAAAAGCACACATATAG
GACTGCCCCGCTGTGAGATATAGGTGGCAGTTCATCCCTCCCCAATCTCC
TTTTCAAGCAGCACGAAAAAGCAGAATTCTCTTTGAGGGGGTTTGAAATA
TATCCCCAAGCAGCCAGCACGAGATATGGCCTTGGTATTAAAACGATTTT
TTTATGTTTGTAAGGATAGATGCTGGTGAAGAGGTTGGATTGAAATGAGT
CCCCTGCACAGATTTATTTGGGAATGTTAATATTACATCAGGTGGGTGAC
CTTCCACGCCTTAATTCCAATATTACAAGCAAAGGAGTTGCTATGATCAA
TCATTTTTGTTTTCACTTGTTTAAAGTTTTCTGTGTGTGGACTCTTATTG
AACATGGTCCCAGAGTTGGAAGCTCAAGGGTCAAGCTCCTAGCTCTTTCA
GGGAAAGTGTTTCCACCTCTCTAGGGTGGACAAGTGCAAAGTGTTTTGAT
TACAGCATTCTATATAATGCCCTCCTGGGTGCTTCACTGTGTTTGCTGCC
ACCTGCTTCAAACTTACACAACGTTGTGCCTGACAGTCACTTCTTTCATC
CCACAGTTTCTATCCAGTCCCTATTAATTAGAAGTACACATTTCACTACT
ATGGCACCCTGCAAACACACCAAGACATCAGCAAGCTGGTCATGACTGTG
TTTCTATTCCTGCGTTTTATCTTATTTTATTTTCTTACAATAAGTCACTC
GTGAGTAGAAGGTTAGCCATTTAAAAAAACCTAGATTGTCTATGCCAAAC
ATTGAGGGCTTTGTGCTGCGATACATTATACCCCTCACAACTGTTGTTGT
GCAGTGTAGGGGTGATCTAGTGTCACCCAAGTGCCCCAGGCAGACTTGCC
CATCCCTAACTCTTGAGAGCCTTTCCCTCTCTCTACCATGCCATTGTTTT
GTGTGTGTGTTTTGCTGTAAATGTTCTTTTGGGGGTTACTGTGGTATTTT
TTACTCTGAAACCTACTCTTAGGTACATCATTTCTTTTGTCTCATCTGAC
CCATGGACTGCTGAAGATGGATCGGAATGGATTCGGCTCACTGTGGTTGG
CCAAAGCTTTCTCCTTCACCAGATACGGAAGATGGTTGGTCCTCCCCTTC
TCCTCCACTAGCATTTATGCATACAAGGCGTAATTATTTCTTGTGATAGG
CTATGACTCAAGGCAATTTGTTGTAGCTGCTTTTTTCTTGTCCATATCCC
CCTGTGGGAGTCAGCACTGTCTTCTACCCCAATTATCTACGGTAGTGGTT
TATCTTTTTTTCATGTCAAAAAAAAAAAAAGAGAGCACATTGCAACTGCC
AACCTTTTTGAAAATTGCCCAACAAGCAACCAATCCCTCCTTGTGGAACG
CTGGATATAAAACCATTACTCAGGTGGCAACTGCAGTAGATCTGGTGAGG
CGGGCCTCATCACCCGGGGATTTTGACATGTCGTTCTCACTGGCCAAGCT
CAACCTGAACATAGCACCAAGCGAGGGTTTGTATCTCGACCGCCCGTTCT
TTGACACCTACAACCGAATGTGAGATCCCTTCCCCCCCAGCCGACCTCCT
GGTCAGCCTTTCATGTTTTATTTCCTCCTACGCCCTGTTCACACATTGCT
AGTATGCCCTCAACCTCCCACTTACGGTTTCTTCCTCCCCAGTGCCTGAA
CGACAAATAGGTAGATGGGCCTGGCACATTGATATCAGTCTTTTCGTTAT
TTGTTTCTGTTTTTTTATTTGTTTCTGTTTGTCGCTCCCGCTAAGTCCAG
GTCTTTGTGTGCCAGGTGCCATACAAAATTGACCACAAGTGATTTATTTC
CCCATTGTGGTAGAATCATGCCAAGATTCGTAATATTTGGGAGTGTGATA
GGTGGCAACACTTGTCGGAGTGTTAGAAACATGTTCAGGAAAGCAGCACC
CACCCTGCCAGTCCGCCCGCTTTCCTCTTTTGTTCTGGTGTAACTTCAAC
TTGCTATTAGCGGGGTTATCAGTAGTGTAACTTGCTGCTTACCCCCTTCT
ATTCCAAAGAGCTTTTCTGCAGCTCCTGCCACATAACGTTTGCTTAGCCT
CACATCCTCTGGGAAACTTACACAACATGTACACTCTGGGCATTACTTTT
TTGAACAAAACGAATCAGCCTCAAAAAGGAAGACAAGGACCGTGTCCTTG
AGTGGGAGAGCGGGCCAGAGGCGGAGGAACTTGAGGAGTTTAAGAGAGCC
AAAATCCACCAGCACATCCTGTCACAGGTGATAAGCAAAACTTTTTTTTT
TGACATGGCAACAGAAGCATAGACAGCACACCTCTCTGTCTCGTATTATG
CTGCCACCTTACGGCAGGGAGCAAGGAGTGAAAGTATCTTAGGGGGTACG
AGTTTTTCCCTTTTTGTCCATTTGGGGCTTGGCTTCCCTTGAGTTTTTTT
TATGACCTTTTCCTACTCCAAAATGTTTAGGAGCAGGCAAAATGTGTAAG
TTTTGAAGAGGTATGTCCCGAACAAGGATATTGACGCTTCCTAACAAACA
CAATAGCCAAAATTACATCAAAATTGCAACATTGGATTTTGGCCCCAGAT
GGATGCGGCTCTACCCTCTAAGATACTTTGACTCAAGGGTCCCTAAAACA
AAGACTAGAGCAAGAGTCCTGCTTGAAGTGCTCGTAGAGATAATGTTTGG
CAAAGGTAACTATAGTATATTCAACCTTTTTTGCCTTCAGCATCCCTATT
GTAGCTTTACTTGTCCCTAAAAAACACAACCTACAATTACTTCACCTGGC
AATATTTTTGTCAACCCCTTCTTCTATTTTATAGATAGTTTTTTGGATTT
TGTCCATGTGGCACAGGTTGCAGTATGAGGAACGTACATTCACTCCTTGT
TTGCTTCTTACTGTGGTGCTTTCAACAGTGTAATACCAACATGTCGCTTT
GCCTCTTACCAAGGCTCGTCACAGCAGTGATTACTGCAGTAGTGAGCACA
GTATTGGGACGGTTTTTTACTGTACTGTAGAACTGCCAGAAATAACGTGG
AAAATCTATAAAGTATTTGTATCATGCCATCCACAAACATAACTTGGTGT
ACAAGTCCTGTGCAGAACTTTCCGTATCTGTAACCAAACTTTACTGATAC
ACATACGTATCACCTACGTTGTATGTATTACAATTTTGTTCTTTTTTTCA
TGCTGAATGGACTTCTTGTGACTTGCATCCTCATGGCTCAGTTTTATGGA
ATCTGCACCATACACGAATTTCATGGGTTTTAACCCTGTTGATGCCAGAT
TTGTTTTAATGGAAATCTGGTTCTACTTACTCATAGTCTGCATGGCAAGC
ATGATGGATGGTAGACCTGTACTTATGGCATCACTAAACGCCTTATTGAG
AACAAGGTGGCAAGGATTCTTTAAGGAAATTCTAGCACAGGATTGAAGGG
CACAATGGGAAGAAACCGTGTAGCCACTGTATAATCCACACCATCCAGTA
GTTTTTCAAACAGATCCATGTGTGTACCAAGGTGTGAAATAAGTACCATG
ACGAGCCTTGTCTACATAGGTGCCTATCATCAATCTCTATGCTCTCGGGT
ATGCGTGAGGTTTGTCCATCATTATATTTTTTTCTGGTTGCAATAAAACA
ACTGCAGTAGCTACTGCTTGCATTTAGCCCCTCCGTTAGAAATGATCTGG
AGGGGGAGCTGAGATGGTAACAGTTTTTACTCTTTTTTCGCCTTCCACCA
CCTAATTGCCACTAACCTGCTCCCTCACCCAATCCAGGAGCAATCAGAGC
ATAACTTTGTGGCTTGGCTGGATGTCATTGGGAGTAATCCATGTGTCTAC
AAGCCAAAAACTGCTGCTCCAACAGTTGCTGCAAACACAACAGAGGGTAC
ACCAGCTTCAGAGTCGGCACCAACACCAGCTGACAGCTGTAGTGCAGATG
GGAAGACACGGAAGGCAACACACAGTTCTTGACGTTAGAGGGTTAAAACA
TGTTCTCAGGATGTCATTTTTAAAAAATTACATTATTTGAAGGGATTTTT
TTAATCAAGGAAGAAGTTAGACCAAAATTTGTGTTCAAACATTCTTCGAT
GCTTTTGGTAAATAGACTGGGGACTAGTGCTGTCGCATTAGCTTCTTGTC
TTACCAAGCTGACCAAGCTGTAAACTCCCTCTCATTGACCTCATGATCTG
CACTTAAACTACAGAAAGAAACCATGAGACAAGTACCACAATGATCTTCA
AACCAAGATTCTTACTGGAAAAAGTCAAGGCAGGTTGCAGGCACCTATCC
ACATATGCTGTATTACAGAGATGTAGTGCTGTGTGGTGCTGTCCTTTTGT
AATCAATCGGTGAGGAAGATTACATGTGGATATTTTCCAAGAAAAACCTG
TCTACATGTAAAGCTGCATCTGGCGTCTTATTGTCTGCCGATCACCCCAA
TAGTCACATGACTGTCTGGCATGGTGGAACATTTTTATCTCAATATTTCA
AGGAATCAGGGGTAGAGACCATGGAAGTTGTTAATGCACAGATGGATGTA
GAGTCTTCCTAGGATTGTTTATATGGCGTTTATACTTTATATCACAATGT
CCCGAATATGGGCTCTGTGAATGATATGACAAGACGTGTCTTAGCATAGG
TTTTGAGTATGTACGGATCACTGAAGAAATAAACTAGACTTGTGCCTTTT
ATATTATTTTTTCTTGTTTTTTCCATTTAGAAAACAGAGAGTATTTTATG
TTCCTTGGGGATGTGTCTGTTTCTGGAAGGCATTTCACCGTGTAATATCA
TGGTGAGGTGAATAAGGAGGCGTGAAAATACGTTCAATGGATGACATTGA
GATGCATGTACATCGACTGTATCCCTCTATTTTGGTTTGCGCATATCATG
ACCTCTTTTCGAACTATGCATAACATGAGAGATTGCACCTGTCACATTTT
TACTTAACTTGCCATTTGGACACCAAGAACTGCTTTGGTCCACAAAAACA
TTGCATGCGTGTACTACCAG back to topCoding sequence (CDS) from alignment at C-tenellus_contig98:3589..15458- >mRNA_C-tenellus_contig98.1.3 ID=mRNA_C-tenellus_contig98.1.3|Name=mRNA_C-tenellus_contig98.1.3|organism=Choristocarpus tenellus KU2346|type=CDS|length=1368bp|location=Sequence derived from alignment at C-tenellus_contig98:3589..15458- (Choristocarpus tenellus KU2346)
ATGCTGCTGCACAGGAAAATTATATGCTTGCGCATGAGCTATGTGGAGGG
GAAAGAGAAAGAGACCATTGCAGCAATCAACAGGCACCTTCCTGAGGATA
TAAAGGTGGTCGATATGCGGCGCGTCCCCAAGGGTTTTGATGCCAAGCAG
GCGTGCAGCAGGCGTCGCTATGAGTACTTCATGCCCACAGCTATGCTAGC
AGCAACAGACCATGTAGCTGGTTTGTACGACGAGGCAAGGCAATGGGCAC
AGGATAATGAATCAAGTCAACCCAGTAACATGAATGCTGACAATGCTGCA
GAGGAGGGTGGAGGAAGTGAGGTTGAGCAAAGGGAGAAAAAGATAGCTTC
AGTAGCTGAAACCTCCAGGTCTGCTGTCATTGCACCCTCTGGTTCCAATT
TGCCCAGTACTAGTGATCTCTCGGCCTCTGAGCCAGGGGAGGGTAGCTCT
GGGGCAGGGATATGCCAAGGCACTGCAGGCGTTTCTGTCGCCAGTGTTTC
CGAGGAGAGTGCAGAAAAGGTCACTGTCAGTGGGTTAGATGGTGCAAAGA
CTATCACACCAGAGGAGGATGCATCTGAGGACAACAGTGGGGAGGGGGGG
GGTGATTTGGATGTTTGGGTGAGCAGGAGGCCACCTTCGGTGGTGGCTGG
TCGAGTGTCAGAGAGTTTGAGGAAGTACCGTGTCACAGCAGAGCTTTTGG
ATTCGCTTAGGAGGGTCCTTGGTTGCTTTAAGGGCACCAAGAACTACCAT
AACTACACCAGCCGTAGGAAGGCTAATGACCCCAGCTGCAGCAGGTACAT
CATTTCTTTTGTCTCATCTGACCCATGGACTGCTGAAGATGGATCGGAAT
GGATTCGGCTCACTGTGGTTGGCCAAAGCTTTCTCCTTCACCAGATACGG
AAGATGGTGGCAACTGCAGTAGATCTGGTGAGGCGGGCCTCATCACCCGG
GGATTTTGACATGTCGTTCTCACTGGCCAAGCTCAACCTGAACATAGCAC
CAAGCGAGGGTTTGTATCTCGACCGCCCGTTCTTTGACACCTACAACCGA
ATCCTCAAAAAGGAAGACAAGGACCGTGTCCTTGAGTGGGAGAGCGGGCC
AGAGGCGGAGGAACTTGAGGAGTTTAAGAGAGCCAAAATCCACCAGCACA
TCCTGTCACAGGAGCAATCAGAGCATAACTTTGTGGCTTGGCTGGATGTC
ATTGGGAGTAATCCATGTGTCTACAAGCCAAAAACTGCTGCTCCAACAGT
TGCTGCAAACACAACAGAGGGTACACCAGCTTCAGAGTCGGCACCAACAC
CAGCTGACAGCTGTAGTGCAGATGGGAAGACACGGAAGAAAGAAACCATG
AGACAAGTACCACAATGA back to top
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