mRNA_C-tenellus_contig9792.2.1 (mRNA) Choristocarpus tenellus KU2346

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-tenellus_contig9792.2.1
Unique NamemRNA_C-tenellus_contig9792.2.1
TypemRNA
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Homology
BLAST of mRNA_C-tenellus_contig9792.2.1 vs. uniprot
Match: D8LDX3_ECTSI (Exocyst subunit Exo70 family protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LDX3_ECTSI)

HSP 1 Score: 68.9 bits (167), Expect = 4.130e-12
Identity = 35/60 (58.33%), Postives = 45/60 (75.00%), Query Frame = 1
Query:    7 VDTLRAGLRNFEQASTQMSGIYDNFETRLGKLEKEILPMKNISENLSLARRNITKAIAKV 186
            V+ L AGL +FE ++ QM GI ++FE RLGKLE+E+LPMK IS  LS +RRNI  AI K+
Sbjct:   17 VEILGAGLTSFESSTRQMKGICEDFEGRLGKLEREMLPMKEISAKLSTSRRNIISAIEKM 76          
BLAST of mRNA_C-tenellus_contig9792.2.1 vs. uniprot
Match: UPI001B8628AE (Cullin repeat-like-containing domain protein n=1 Tax=Suillus clintonianus TaxID=1904413 RepID=UPI001B8628AE)

HSP 1 Score: 52.0 bits (123), Expect = 3.880e-6
Identity = 26/64 (40.62%), Postives = 38/64 (59.38%), Query Frame = 1
Query:    1 AAVDTLRAGLRNFEQASTQMSGIYDNFETRLGKLEKEILPMKNISENLSLARRNITKAIAKVGE 192
            A ++ L   L    Q S +M+ I  NF+TRL +LEK ILP+ N ++ L L   NI +A+ K+ E
Sbjct:    6 AEIELLEQNLNKTVQISQRMTSILTNFDTRLARLEKSILPLYNSTQKLKLLAHNIDRALLKIDE 69          
BLAST of mRNA_C-tenellus_contig9792.2.1 vs. uniprot
Match: A0A0D0ALA3_9AGAM (Exocyst complex protein EXO70 n=8 Tax=Suillus TaxID=5379 RepID=A0A0D0ALA3_9AGAM)

HSP 1 Score: 50.4 bits (119), Expect = 1.360e-5
Identity = 26/64 (40.62%), Postives = 37/64 (57.81%), Query Frame = 1
Query:    1 AAVDTLRAGLRNFEQASTQMSGIYDNFETRLGKLEKEILPMKNISENLSLARRNITKAIAKVGE 192
            A ++ L   L    Q S +M+ I  NF+TRL KLEK ILP+ N ++ L     NI +A+ K+ E
Sbjct:    6 AEIELLEQNLNKTHQISQRMTSILTNFDTRLVKLEKSILPLYNSTQKLKQRAHNIDRALLKIDE 69          
BLAST of mRNA_C-tenellus_contig9792.2.1 vs. uniprot
Match: A0A1J8R5N5_9AGAM (Uncharacterized protein (Fragment) n=1 Tax=Rhizopogon vesiculosus TaxID=180088 RepID=A0A1J8R5N5_9AGAM)

HSP 1 Score: 48.5 bits (114), Expect = 2.650e-5
Identity = 24/64 (37.50%), Postives = 37/64 (57.81%), Query Frame = 1
Query:    1 AAVDTLRAGLRNFEQASTQMSGIYDNFETRLGKLEKEILPMKNISENLSLARRNITKAIAKVGE 192
            A ++ L   L    Q S +M+ I  NF+TRL K+E+ ILP+ N ++ L     NI +A+ K+ E
Sbjct:    6 AEIELLEQNLNKTRQISQRMTSILTNFDTRLMKIERSILPLYNSTQKLKQRAHNIDRALLKIDE 69          
BLAST of mRNA_C-tenellus_contig9792.2.1 vs. uniprot
Match: A0A1B7MQL9_9AGAM (Exocyst complex protein EXO70 n=1 Tax=Rhizopogon vinicolor AM-OR11-026 TaxID=1314800 RepID=A0A1B7MQL9_9AGAM)

HSP 1 Score: 48.5 bits (114), Expect = 6.520e-5
Identity = 24/64 (37.50%), Postives = 37/64 (57.81%), Query Frame = 1
Query:    1 AAVDTLRAGLRNFEQASTQMSGIYDNFETRLGKLEKEILPMKNISENLSLARRNITKAIAKVGE 192
            A ++ L   L    Q S +M+ I  NF+TRL K+E+ ILP+ N ++ L     NI +A+ K+ E
Sbjct:    6 AEIELLEQNLNKTRQISQRMTSILTNFDTRLVKIERSILPLYNSTQKLKQRAHNIDRALLKIDE 69          
BLAST of mRNA_C-tenellus_contig9792.2.1 vs. uniprot
Match: A0A0C9V1V2_9AGAM (Exocyst complex protein EXO70 n=1 Tax=Hydnomerulius pinastri MD-312 TaxID=994086 RepID=A0A0C9V1V2_9AGAM)

HSP 1 Score: 48.1 bits (113), Expect = 8.930e-5
Identity = 24/64 (37.50%), Postives = 38/64 (59.38%), Query Frame = 1
Query:    1 AAVDTLRAGLRNFEQASTQMSGIYDNFETRLGKLEKEILPMKNISENLSLARRNITKAIAKVGE 192
            A ++ L   L    Q S +M+ I  NF++RL KLEK ILP+   ++ L+    NI +A++K+ E
Sbjct:    6 AEIELLEQNLNKTHQISQRMTSILTNFDSRLVKLEKSILPLYTATQKLNQRSHNIDRALSKIDE 69          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig9792.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D8LDX3_ECTSI4.130e-1258.33Exocyst subunit Exo70 family protein n=2 Tax=Ectoc... [more]
UPI001B8628AE3.880e-640.63Cullin repeat-like-containing domain protein n=1 T... [more]
A0A0D0ALA3_9AGAM1.360e-540.63Exocyst complex protein EXO70 n=8 Tax=Suillus TaxI... [more]
A0A1J8R5N5_9AGAM2.650e-537.50Uncharacterized protein (Fragment) n=1 Tax=Rhizopo... [more]
A0A1B7MQL9_9AGAM6.520e-537.50Exocyst complex protein EXO70 n=1 Tax=Rhizopogon v... [more]
A0A0C9V1V2_9AGAM8.930e-537.50Exocyst complex protein EXO70 n=1 Tax=Hydnomeruliu... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig9792contigC-tenellus_contig9792:1977..2168 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog221103.XP_007853049.1
Preferred nameEXO70
PFAMsExo70
Model size192
Max annot lvl4751|Fungi
KEGG koko:K07195
KEGG Pathwayko04910,map04910
Hectar predicted targeting categoryother localisation
GOsGO:0000131,GO:0000145,GO:0000920,GO:0001411,GO:0001927,GO:0003674,GO:0005488,GO:0005515,GO:0005543,GO:0005546,GO:0005575,GO:0005622,GO:0005623,GO:0005628,GO:0005737,GO:0005886,GO:0005933,GO:0005934,GO:0005935,GO:0005937,GO:0005938,GO:0006810,GO:0006886,GO:0006887,GO:0006892,GO:0006893,GO:0006903,GO:0006904,GO:0007154,GO:0007165,GO:0007264,GO:0007265,GO:0007266,GO:0008104,GO:0008150,GO:0008289,GO:0009987,GO:0015031,GO:0015833,GO:0016020,GO:0016043,GO:0016192,GO:0017016,GO:0017048,GO:0017049,GO:0019899,GO:0022406,GO:0022607,GO:0023052,GO:0030427,GO:0031267,GO:0031503,GO:0032153,GO:0032940,GO:0032991,GO:0033036,GO:0034613,GO:0034622,GO:0034629,GO:0035091,GO:0035556,GO:0042763,GO:0042764,GO:0042886,GO:0042995,GO:0043167,GO:0043168,GO:0043332,GO:0043933,GO:0044085,GO:0044424,GO:0044444,GO:0044448,GO:0044463,GO:0044464,GO:0045184,GO:0046903,GO:0046907,GO:0048193,GO:0048278,GO:0050789,GO:0050794,GO:0050896,GO:0051020,GO:0051179,GO:0051234,GO:0051285,GO:0051286,GO:0051301,GO:0051601,GO:0051640,GO:0051641,GO:0051648,GO:0051649,GO:0051650,GO:0051656,GO:0051716,GO:0065003,GO:0065007,GO:0070727,GO:0071702,GO:0071705,GO:0071840,GO:0071944,GO:0090522,GO:0098876,GO:0099022,GO:0099023,GO:0099568,GO:0099738,GO:0120025,GO:0120038,GO:0140029,GO:0140056,GO:1901981,GO:1902936
Exons1
Evalue2.23e-06
EggNOG OGsKOG2344@1|root,KOG2344@2759|Eukaryota,38F68@33154|Opisthokonta,3NZNS@4751|Fungi,3UZRK@5204|Basidiomycota,224DV@155619|Agaricomycetes,3W492@5338|Agaricales
DescriptionExo70 exocyst complex subunit
Cds size192
COG categoryU
BRITEko00000,ko00001,ko03036,ko04131
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680790201.5657418-CDS-C-tenellus_contig9792:1976..21681680790201.5657418-CDS-C-tenellus_contig9792:1976..2168Choristocarpus tenellus KU2346CDSC-tenellus_contig9792 1977..2168 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig9792.2.1prot_C-tenellus_contig9792.2.1Choristocarpus tenellus KU2346polypeptideC-tenellus_contig9792 1977..2168 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-tenellus_contig9792.2.1

>prot_C-tenellus_contig9792.2.1 ID=prot_C-tenellus_contig9792.2.1|Name=mRNA_C-tenellus_contig9792.2.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=64bp
AAVDTLRAGLRNFEQASTQMSGIYDNFETRLGKLEKEILPMKNISENLSL
ARRNITKAIAKVGE
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mRNA from alignment at C-tenellus_contig9792:1977..2168-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-tenellus_contig9792.2.1 ID=mRNA_C-tenellus_contig9792.2.1|Name=mRNA_C-tenellus_contig9792.2.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=192bp|location=Sequence derived from alignment at C-tenellus_contig9792:1977..2168- (Choristocarpus tenellus KU2346)
GCGGCAGTTGATACCCTCAGAGCAGGCCTCCGCAACTTCGAACAGGCCTC TACACAGATGTCTGGCATCTACGACAACTTCGAGACTCGTTTAGGAAAGC TGGAGAAAGAAATCCTTCCGATGAAAAATATTAGTGAGAACCTCTCGTTG GCGCGCCGAAATATCACCAAGGCCATAGCCAAGGTCGGTGAA
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Coding sequence (CDS) from alignment at C-tenellus_contig9792:1977..2168-

>mRNA_C-tenellus_contig9792.2.1 ID=mRNA_C-tenellus_contig9792.2.1|Name=mRNA_C-tenellus_contig9792.2.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=192bp|location=Sequence derived from alignment at C-tenellus_contig9792:1977..2168- (Choristocarpus tenellus KU2346)
GCGGCAGTTGATACCCTCAGAGCAGGCCTCCGCAACTTCGAACAGGCCTC
TACACAGATGTCTGGCATCTACGACAACTTCGAGACTCGTTTAGGAAAGC
TGGAGAAAGAAATCCTTCCGATGAAAAATATTAGTGAGAACCTCTCGTTG
GCGCGCCGAAATATCACCAAGGCCATAGCCAAGGTCGGTGAA
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