prot_C-tenellus_contig9790.1.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig9790.1.1
Unique Nameprot_C-tenellus_contig9790.1.1
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length234
Homology
BLAST of mRNA_C-tenellus_contig9790.1.1 vs. uniprot
Match: A0A6H5JLN0_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLN0_9PHAE)

HSP 1 Score: 148 bits (374), Expect = 9.350e-39
Identity = 90/238 (37.82%), Postives = 128/238 (53.78%), Query Frame = 0
Query:    2 AIALSEDMKLRHADVRQAFVQADVKEYIYIEQPEDVTTAPGMVGKLKRS-----QASRNWHLKLAENLKGLGFKQCEPDSCLLRLVEHGVLEVLIATHVDHLLMASHSQEKGRAVAEALNKGFSVKDLGDVKLYMGCCLTRDHKMRTLKIDRQVYVEGLVERSKIIREYDMPESKTRNLSEKDSCAKLAPSTPYREAVRSLLWLVTMIRSDIPNTEISLTRFSGNPGQRHWEAVKQIL 234
            A+A  +++ LRH D++QAFVQ+D+ E +++  PE      GM+ KL +S     QASR WH  LA  L  LGF QC  D+C+ RL+E G + V +  HVD +      +E+       LN    VK+LGD++ Y GC   RD    TLKI +Q Y E L     +    ++P      LSE D   ++  S P+RE + SL+WL T  R DI N   ++ R+  +P + HW A   IL
Sbjct:   26 AMACEQNLSLRHFDIKQAFVQSDLDEDVFMRLPEGCGRLSGMIVKLNKSLYGLKQASRQWHSHLARCLICLGFIQCMADTCVFRLIEEGRVVVTLVVHVDDIFSIGE-EERCDQFGRDLNTMVPVKNLGDLRWYSGCFYERDWDAGTLKISQQTYAEELGMEFGVEYGKEIPLPVGLKLSEFDQDEEVV-SWPFRELIGSLMWLATQTRPDIANAVRAVARYCASPKEIHWRAGLGIL 261          
BLAST of mRNA_C-tenellus_contig9790.1.1 vs. uniprot
Match: A0A6H5KQB8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQB8_9PHAE)

HSP 1 Score: 148 bits (374), Expect = 8.760e-38
Identity = 90/238 (37.82%), Postives = 128/238 (53.78%), Query Frame = 0
Query:    2 AIALSEDMKLRHADVRQAFVQADVKEYIYIEQPEDVTTAPGMVGKLKRS-----QASRNWHLKLAENLKGLGFKQCEPDSCLLRLVEHGVLEVLIATHVDHLLMASHSQEKGRAVAEALNKGFSVKDLGDVKLYMGCCLTRDHKMRTLKIDRQVYVEGLVERSKIIREYDMPESKTRNLSEKDSCAKLAPSTPYREAVRSLLWLVTMIRSDIPNTEISLTRFSGNPGQRHWEAVKQIL 234
            A+A  +++ LRH D++QAFVQ+D+ E +++  PE      GM+ KL +S     QASR WH  LA  L  LGF QC  D+C+ RL+E G + V +  HVD +      +E+       LN    VK+LGD++ Y GC   RD    TLKI +Q Y E L     +    ++P      LSE D   ++  S P+RE + SL+WL T  R DI N   ++ R+  +P + HW A   IL
Sbjct:  200 AMACEQNLSLRHFDIKQAFVQSDLDEDVFMRLPEGCGRLSGMIVKLNKSLYGLKQASRQWHSHLARCLICLGFIQCMADTCVFRLIEEGRVVVTLVVHVDDIFSIGE-EERCDQFGRDLNTMVPVKNLGDLRWYSGCFYERDWDAGTLKISQQTYAEELGMEFGVEYGKEIPLPVGLKLSEFDQDEEVV-SWPFRELIGSLMWLATQTRPDIANAVRAVARYCASPKEIHWRAGLGIL 435          
BLAST of mRNA_C-tenellus_contig9790.1.1 vs. uniprot
Match: A0A6H5K2R1_9PHAE (Integrase catalytic domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2R1_9PHAE)

HSP 1 Score: 148 bits (374), Expect = 2.770e-37
Identity = 90/238 (37.82%), Postives = 128/238 (53.78%), Query Frame = 0
Query:    2 AIALSEDMKLRHADVRQAFVQADVKEYIYIEQPEDVTTAPGMVGKLKRS-----QASRNWHLKLAENLKGLGFKQCEPDSCLLRLVEHGVLEVLIATHVDHLLMASHSQEKGRAVAEALNKGFSVKDLGDVKLYMGCCLTRDHKMRTLKIDRQVYVEGLVERSKIIREYDMPESKTRNLSEKDSCAKLAPSTPYREAVRSLLWLVTMIRSDIPNTEISLTRFSGNPGQRHWEAVKQIL 234
            A+A  +++ LRH D++QAFVQ+D+ E +++  PE      GM+ KL +S     QASR WH  LA  L  LGF QC  D+C+ RL+E G + V +  HVD +      +E+       LN    VK+LGD++ Y GC   RD    TLKI +Q Y E L     +    ++P      LSE D   ++  S P+RE + SL+WL T  R DI N   ++ R+  +P + HW A   IL
Sbjct:  721 AMACEQNLSLRHFDIKQAFVQSDLDEDVFMRLPEGCGRLSGMIVKLNKSLYGLKQASRQWHSHLARCLICLGFIQCMADTCVFRLIEEGRVVVTLVVHVDDIFSIGE-EERCDQFGRDLNTMVPVKNLGDLRWYSGCFYERDWDAGTLKISQQTYAEELGMEFGVEYGKEIPLPVGLKLSEFDQDEEVV-SWPFRELIGSLMWLATQTRPDIANAVRAVARYCASPKEIHWRAGLGIL 956          
BLAST of mRNA_C-tenellus_contig9790.1.1 vs. uniprot
Match: A0A6H5KKG5_9PHAE (Integrase catalytic domain-containing protein n=6 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKG5_9PHAE)

HSP 1 Score: 145 bits (367), Expect = 2.380e-36
Identity = 89/238 (37.39%), Postives = 127/238 (53.36%), Query Frame = 0
Query:    2 AIALSEDMKLRHADVRQAFVQADVKEYIYIEQPEDVTTAPGMVGKLKRS-----QASRNWHLKLAENLKGLGFKQCEPDSCLLRLVEHGVLEVLIATHVDHLLMASHSQEKGRAVAEALNKGFSVKDLGDVKLYMGCCLTRDHKMRTLKIDRQVYVEGLVERSKIIREYDMPESKTRNLSEKDSCAKLAPSTPYREAVRSLLWLVTMIRSDIPNTEISLTRFSGNPGQRHWEAVKQIL 234
            A+A  +++ LRH D++QAFVQ+D+ E +++  PE      GM+ KL +S     QASR WH  LA  L  LGF QC  D+C+ RL+E G + V +  HVD +      +E+       LN    VK+LGD++ Y GC   RD    TLKI +Q Y E L     +    ++P      LSE D   ++  S P+R  + SL+WL T  R DI N   ++ R+  +P + HW A   IL
Sbjct:  751 AMACEQNLSLRHFDIKQAFVQSDLDEDVFMRLPEGCGRLSGMIVKLNKSLYGLKQASRQWHSHLARCLICLGFIQCMADTCVFRLIEEGRVVVTLVVHVDFIFSIGE-EERCDQFGRDLNTMVPVKNLGDLRWYSGCLYERDWDAGTLKISQQTYAEELGMEFGVEYGKEIPLPVGLKLSEFDQDEEVV-SWPFRGLIGSLMWLATQTRPDIANAVRAVERYCASPKEIHWRAGLGIL 986          
BLAST of mRNA_C-tenellus_contig9790.1.1 vs. uniprot
Match: A0A6H5KSN7_9PHAE (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSN7_9PHAE)

HSP 1 Score: 140 bits (354), Expect = 1.420e-34
Identity = 86/238 (36.13%), Postives = 127/238 (53.36%), Query Frame = 0
Query:    2 AIALSEDMKLRHADVRQAFVQADVKEYIYIEQPEDVTTAPGMVGKLKRS-----QASRNWHLKLAENLKGLGFKQCEPDSCLLRLVEHGVLEVLIATHVDHLLMASHSQEKGRAVAEALNKGFSVKDLGDVKLYMGCCLTRDHKMRTLKIDRQVYVEGLVERSKIIREYDMPESKTRNLSEKDSCAKLAPSTPYREAVRSLLWLVTMIRSDIPNTEISLTRFSGNPGQRHWEAVKQIL 234
            A+A  + + +RH D++QAFVQ+++ E +++  PE      GM+ KL +S     Q SR WH  LA  L  LGF QC  D+C+ RL+E G +   +  HVD +L     +E+       LN    VK+ GD++ Y GC   RD    TLKI +Q Y E L  +  +    ++P      LSE D   ++  S P+RE + SL+WL T +R DI N   ++ R+  +P + HW A   IL
Sbjct: 1287 AMACEQKLSVRHFDIKQAFVQSNLDEDVFMCLPEGCGRLSGMIVKLNKSLYGLKQVSRQWHSHLARCLICLGFIQCLADTCVFRLIEEGRVVATLVVHVDDILSIGE-EERCDQFGRDLNTMVPVKNRGDLRWYSGCLYERDWDAGTLKISQQTYAEELGMKFGVEYGKEIPLPVGLKLSEFDQDEEVV-SWPFRELIGSLMWLATQMRPDIANAVKAVARYCASPKEIHWRAGLGIL 1522          
BLAST of mRNA_C-tenellus_contig9790.1.1 vs. uniprot
Match: A0A6H5JHJ3_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHJ3_9PHAE)

HSP 1 Score: 137 bits (345), Expect = 2.050e-33
Identity = 76/233 (32.62%), Postives = 123/233 (52.79%), Query Frame = 0
Query:    2 AIALSEDMKLRHADVRQAFVQADVKEYIYIEQPEDVTTAPGMVGKLKRSQASRNWHLKLAENLKGLGFKQCEPDSCLLRLVEHGVLEVLIATHVDHLLMASHSQEKGRAVAEALNKGFSVKDLGDVKLYMGCCLTRDHKMRTLKIDRQVYVEGLVERSKIIREYDMPESKTRNLSEKDSCAKLAPSTPYREAVRSLLWLVTMIRSDIPNTEISLTRFSGNPGQRHWEAVKQIL 234
            A+A   ++ L H D+ Q FV+++++E + I  P+      GM+ KL + QA R WH  L   L  LGF+QC  D+C+ RL+E G + +++  HVD +      +   +  A+ LNK   VK+LG+++ Y GC   R+ +   L I +Q + + L     ++    +P S    LS+ D+  ++A   P+RE V S +WL    R DI N   ++ R+  +P   HW A   IL
Sbjct:  537 ALACELNLDLCHFDIAQIFVRSELEEDVCIRLPQGCGALSGMIAKLGKRQACRQWHAMLKRCLVALGFEQCMADACVFRLIEDGCVVLILVVHVDDIFAVGERERCDKFGAD-LNKSVPVKNLGELRWYSGCFYERNKETGRLTISQQTFTDELAAEYGVVGGRSVPMSSGVKLSDFDA-DEVATDFPFRELVGSWIWLAIQTRPDIANAVRAVARYCASPKLVHWNAAMDIL 767          
BLAST of mRNA_C-tenellus_contig9790.1.1 vs. uniprot
Match: A0A6H5K9I1_9PHAE (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9I1_9PHAE)

HSP 1 Score: 137 bits (344), Expect = 2.740e-33
Identity = 90/254 (35.43%), Postives = 128/254 (50.39%), Query Frame = 0
Query:    2 AIALSEDMKLRHADVRQAFVQADVKEYIYIEQPEDVTTAPGMVGKLKRS-----QASRNWHLKLAENLKGLGFKQCEPDSCLLRLVEHGVLEVLIATHVDHLLMASHSQEKGRAVAEALNKGFSVKDLGDVK----------------LYMGCCLTRDHKMRTLKIDRQVYVEGLVERSKIIREYDMPESKTRNLSEKDSCAKLAPSTPYREAVRSLLWLVTMIRSDIPNTEISLTRFSGNPGQRHWEAVKQIL 234
            A+A  +++ LRH D++QAFVQ+D+ E +++  PE      GM+ KL +S     QASR WH  LA  L  LGF QC  D+C+ RL+E G + V +  HVD +      +E+       LN    VK+LGD++                 Y GC   RD    TLKI +Q Y E L     +    ++P      LSE D   ++  S P+RE + SL+WL T  R DI N   ++ R+  +P + HW A   IL
Sbjct:  556 AMACEQNLSLRHFDIKQAFVQSDLDEDVFMRLPEGCGRLSGMIVKLNKSLYGLKQASRQWHSHLARCLICLGFIQCMADTCVFRLIEEGRVVVTLVVHVDDIFSIGE-EERCDQFGRDLNTLVPVKNLGDLRWXXXXXXXXXXXXXXXXYSGCFYERDWDAGTLKISQQTYAEELGMEFGVEYGKEIPLPVGLKLSEFDQDEEVV-SWPFRELIGSLMWLATQTRPDIANAVRAVARYCASPIEIHWRAGIGIL 807          
BLAST of mRNA_C-tenellus_contig9790.1.1 vs. uniprot
Match: A0A6H5JH88_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JH88_9PHAE)

HSP 1 Score: 131 bits (329), Expect = 4.050e-33
Identity = 81/213 (38.03%), Postives = 114/213 (53.52%), Query Frame = 0
Query:    3 IALSEDMKLRHADVRQAFVQADVKEYIYIEQPEDVTTAPGMVGKLKRS-----QASRNWHLKLAENLKGLGFKQCEPDSCLLRLVEHGVLEVLIATHVDHLLMASHSQEKGRAVAEALNKGFSVKDLGDVKLYMGCCLTRDHKMRTLKIDRQVYVEGLVERSKIIREYDMPESKTRNLSEKDSCAKLAPSTPYREAVRSLLWLVTMIRSDIPN 210
            +A  +   LRH D++QAFVQ+D+ E++++  PE      GM+ KL +S     QASR WH  L   L  LGF QC  D+C+ RL+E G + V +A HVD +      +E+       LN    VK+LGD++ Y GC   RD    +LKI +Q Y E L     +    ++P      LSE D   ++  S P+RE + SL+WL T  R DI N
Sbjct:    1 MACEQYFSLRHFDIKQAFVQSDLDEFVFMRLPEGCGRLSGMIVKLNKSLYGLKQASRQWHSHLVRCLICLGFIQCLADTCVFRLIEEGRVVVTLAVHVDDIFSIGE-EERCDQFGRDLNTMVPVKNLGDLRWYSGCFYERDWDAGSLKISQQTYAEELGMEFGVEYGKEIPLPVGLKLSEFDQDEEVV-SWPFRELIGSLMWLATQTRPDIAN 211          
BLAST of mRNA_C-tenellus_contig9790.1.1 vs. uniprot
Match: A0A6H5JCD8_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCD8_9PHAE)

HSP 1 Score: 135 bits (341), Expect = 7.140e-33
Identity = 78/241 (32.37%), Postives = 126/241 (52.28%), Query Frame = 0
Query:    2 AIALSEDMKLRHADVRQAFVQADVKEYIYIEQPEDVTTAPGMVGKLKRS-----QASRNWHLKLAENLKGLGFKQCEPDSCLLRLVEHGVLEVLIATHVDHLLMA---SHSQEKGRAVAEALNKGFSVKDLGDVKLYMGCCLTRDHKMRTLKIDRQVYVEGLVERSKIIREYDMPESKTRNLSEKDSCAKLAPSTPYREAVRSLLWLVTMIRSDIPNTEISLTRFSGNPGQRHWEAVKQIL 234
            A+A    + L H D  QAFVQ+++ E +Y+  P+      G + +L+RS     QASR WH  L   +K LGF+QC  D+C++RL+E GV+ +++  HVD +      S  ++ GR     LN+   + +LG+++LY G   +RD    T+ + +Q Y   +V +  + R  + P +    L E D+C       P+R  V  L+WL    R DI N   ++ R+S  P   HW+A   ++
Sbjct:  702 ALACELGLDLCHFDAEQAFVQSELVECVYLRLPQGCGALSGKIVRLRRSLYGLKQASRTWHKHLVRGMKCLGFEQCAADACVMRLIEEGVVAMVVVVHVDDIFSIGKKSRCEQFGRD----LNEYVPITNLGELRLYAGIRFSRDFAQGTITLSQQTYATNMVAKFGVTRNKETPMAVGVKLEEFDACEPDVEE-PFRSLVGHLMWLANQTRPDILNAVRAVARYSYAPKSVHWKAALHMV 937          
BLAST of mRNA_C-tenellus_contig9790.1.1 vs. uniprot
Match: A0A6H5KDF0_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDF0_9PHAE)

HSP 1 Score: 135 bits (340), Expect = 9.230e-33
Identity = 85/238 (35.71%), Postives = 126/238 (52.94%), Query Frame = 0
Query:    2 AIALSEDMKLRHADVRQAFVQADVKEYIYIEQPEDVTTAPGMVGKLKRS-----QASRNWHLKLAENLKGLGFKQCEPDSCLLRLVEHGVLEVLIATHVDHLLMASHSQEKGRAVAEALNKGFSVKDLGDVKLYMGCCLTRDHKMRTLKIDRQVYVEGLVERSKIIREYDMPESKTRNLSEKDSCAKLAPSTPYREAVRSLLWLVTMIRSDIPNTEISLTRFSGNPGQRHWEAVKQIL 234
            A+A  +++ LRH D++QAFVQ+++ E I++  PE      GM+ KL +S     Q SR WH   A  L  LGF QC  D+ +LRL+  G + V +  HVD +   S  +E+        +    +K+LGD++ Y GC   RD   RTLKI +Q Y E L     +    ++P      LSE D   ++  S  +RE + SL+WL T  R DI N   ++ R+  +P + HW AV  I+
Sbjct:  531 AMACEQNLSLRHFDIKQAFVQSELDEDIFMRLPEGCGRLSGMIVKLNKSLYGLKQVSRQWHSHSARCLICLGFIQCLADTIVLRLIAEGRVVVTLVVHVDDIF--SIGEERCDQFGRDRDTMIPLKNLGDLRWYSGCFYERDWDARTLKISQQTYAEELGMEFGVEYGKEIPLPAGLKLSEFDQDEEVV-SWSFRELIGSLMWLATQTRPDIANAVRAVARYFASPKEIHWRAVLGIV 765          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig9790.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JLN0_9PHAE9.350e-3937.82Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KQB8_9PHAE8.760e-3837.82Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5K2R1_9PHAE2.770e-3737.82Integrase catalytic domain-containing protein n=3 ... [more]
A0A6H5KKG5_9PHAE2.380e-3637.39Integrase catalytic domain-containing protein n=6 ... [more]
A0A6H5KSN7_9PHAE1.420e-3436.13Integrase catalytic domain-containing protein (Fra... [more]
A0A6H5JHJ3_9PHAE2.050e-3332.62Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5K9I1_9PHAE2.740e-3335.43Integrase catalytic domain-containing protein (Fra... [more]
A0A6H5JH88_9PHAE4.050e-3338.03Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JCD8_9PHAE7.140e-3332.37Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5KDF0_9PHAE9.230e-3335.71Integrase catalytic domain-containing protein n=1 ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 1..162
e-value: 1.6E-17
score: 64.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig9790contigC-tenellus_contig9790:2951..3652 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig9790.1.1mRNA_C-tenellus_contig9790.1.1Choristocarpus tenellus KU2346mRNAC-tenellus_contig9790 2951..3667 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig9790.1.1 ID=prot_C-tenellus_contig9790.1.1|Name=mRNA_C-tenellus_contig9790.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=234bp
MAIALSEDMKLRHADVRQAFVQADVKEYIYIEQPEDVTTAPGMVGKLKRS
QASRNWHLKLAENLKGLGFKQCEPDSCLLRLVEHGVLEVLIATHVDHLLM
ASHSQEKGRAVAEALNKGFSVKDLGDVKLYMGCCLTRDHKMRTLKIDRQV
YVEGLVERSKIIREYDMPESKTRNLSEKDSCAKLAPSTPYREAVRSLLWL
VTMIRSDIPNTEISLTRFSGNPGQRHWEAVKQIL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2