prot_C-tenellus_contig9728.1.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig9728.1.1
Unique Nameprot_C-tenellus_contig9728.1.1
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length80
Homology
BLAST of mRNA_C-tenellus_contig9728.1.1 vs. uniprot
Match: A9SLN8_PHYPA (AP-1 complex subunit gamma n=1 Tax=Physcomitrium patens TaxID=3218 RepID=A9SLN8_PHYPA)

HSP 1 Score: 69.7 bits (169), Expect = 4.270e-12
Identity = 35/75 (46.67%), Postives = 49/75 (65.33%), Query Frame = 0
Query:    2 TKLMFQVAVPKAFTMRMEPASGHVLPPGSVAAVTQVIRVTSSLQSSTKPLMMKLKITYQQGGRTVTEVAQVAQFP 76
            T  +FQ AVPK  T+R++PASG  LP  S   +TQ++ VT+SL    KPL+M++KI Y+  G+ V E  +V  FP
Sbjct:  682 TDFLFQAAVPKFMTLRLDPASGSSLPQNSSGVITQILTVTNSLHGQ-KPLVMRVKIAYKADGQPVLEQGEVNNFP 755          
BLAST of mRNA_C-tenellus_contig9728.1.1 vs. uniprot
Match: A0A2K1JQ28_PHYPA (AP-1 complex subunit gamma n=2 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1JQ28_PHYPA)

HSP 1 Score: 69.7 bits (169), Expect = 4.310e-12
Identity = 35/75 (46.67%), Postives = 49/75 (65.33%), Query Frame = 0
Query:    2 TKLMFQVAVPKAFTMRMEPASGHVLPPGSVAAVTQVIRVTSSLQSSTKPLMMKLKITYQQGGRTVTEVAQVAQFP 76
            T  +FQ AVPK  T+R++PASG  LP  S   +TQ++ VT+SL    KPL+M++KI Y+  G+ V E  +V  FP
Sbjct:  984 TDFLFQAAVPKFMTLRLDPASGSSLPQNSSGVITQILTVTNSLHGQ-KPLVMRVKIAYKADGQPVLEQGEVNNFP 1057          
BLAST of mRNA_C-tenellus_contig9728.1.1 vs. uniprot
Match: A0A0A9VM58_ARUDO (AP-1 complex subunit gamma-2, putative n=1 Tax=Arundo donax TaxID=35708 RepID=A0A0A9VM58_ARUDO)

HSP 1 Score: 64.3 bits (155), Expect = 2.980e-11
Identity = 32/78 (41.03%), Postives = 50/78 (64.10%), Query Frame = 0
Query:    2 TKLMFQVAVPKAFTMRMEPASGHVLPPGSVAAVTQVIRVTSSLQSSTKPLMMKLKITYQQGGRTVTEVAQVAQFPPGF 79
            T  +FQ AVPK   +R++PASG+++P    +AVTQ + VT++ Q   KPL M+++++Y+  G    E  QV+ FP G 
Sbjct:   63 TDFIFQAAVPKFIQLRLDPASGNIVPASGNSAVTQGLNVTNN-QHGQKPLAMRIRMSYKVNGEDRLEQGQVSNFPSGL 139          
BLAST of mRNA_C-tenellus_contig9728.1.1 vs. uniprot
Match: D8TSS4_VOLCA (AP-1 complex subunit gamma n=1 Tax=Volvox carteri f. nagariensis TaxID=3068 RepID=D8TSS4_VOLCA)

HSP 1 Score: 67.0 bits (162), Expect = 3.800e-11
Identity = 39/79 (49.37%), Postives = 50/79 (63.29%), Query Frame = 0
Query:    2 TKLMFQVAVPKAFTMRMEPASGHVLPPGSVAAVTQVIRVTSSLQSSTKPLMMKLKITYQQ-GGRTVTEVAQVAQFPPGF 79
            T    QVAVPK   +++EPASG VLPP     V+Q I V +S Q   K L+M+L+IT+   GG    E+A+VA FPPGF
Sbjct:  724 TDYTLQVAVPKFMQIKLEPASGTVLPPRGGGGVSQKIYVNNS-QHGVKQLVMRLRITFTSAGGHAHEELAEVANFPPGF 801          
BLAST of mRNA_C-tenellus_contig9728.1.1 vs. uniprot
Match: A0A453PYS8_AEGTS (GAE domain-containing protein n=1 Tax=Aegilops tauschii subsp. strangulata TaxID=200361 RepID=A0A453PYS8_AEGTS)

HSP 1 Score: 64.7 bits (156), Expect = 4.750e-11
Identity = 32/77 (41.56%), Postives = 49/77 (63.64%), Query Frame = 0
Query:    2 TKLMFQVAVPKAFTMRMEPASGHVLPPGSVAAVTQVIRVTSSLQSSTKPLMMKLKITYQQGGRTVTEVAQVAQFPPG 78
            T  +FQ AVPK   +R++PASG+++P     +VTQ   VT++ Q   KPL M+++++Y+  G    E  QV+ FPPG
Sbjct:  105 TDFIFQAAVPKFIQLRLDPASGNIVPANGKGSVTQGFSVTNN-QHGQKPLAMRIRMSYKVNGEDRLEQGQVSNFPPG 180          
BLAST of mRNA_C-tenellus_contig9728.1.1 vs. uniprot
Match: F0YJH9_AURAN (AP-1 complex subunit gamma n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YJH9_AURAN)

HSP 1 Score: 66.2 bits (160), Expect = 7.100e-11
Identity = 34/77 (44.16%), Postives = 50/77 (64.94%), Query Frame = 0
Query:    3 KLMFQVAVPKAFTMRMEPASGHVLPPGSVAAVTQVIRVTSSLQSSTKPLMMKLKITYQQGGRTVTEVAQVAQFPPGF 79
            + +FQ AVPK   M M+PA+   +   S   V+Q++++ ++  S +KPLMM+LKI Y  GGR + E AQV+ FP GF
Sbjct:  757 RFVFQAAVPKYVNMEMKPATAGSVSANSRGDVSQIVKLKNT--SPSKPLMMRLKIQYNVGGRQIVEQAQVSSFPAGF 831          
BLAST of mRNA_C-tenellus_contig9728.1.1 vs. uniprot
Match: A0A7S1F0P5_NOCSC (AP-1 complex subunit gamma n=1 Tax=Noctiluca scintillans TaxID=2966 RepID=A0A7S1F0P5_NOCSC)

HSP 1 Score: 66.2 bits (160), Expect = 7.100e-11
Identity = 36/79 (45.57%), Postives = 51/79 (64.56%), Query Frame = 0
Query:    1 MTKLMFQVAVPKAFTMRMEPASGHVLPPGSVAAVTQVIRVTSSLQSSTKPLMMKLKITYQQGGRTVTEVAQVAQFPPGF 79
            +T  +F+ AVPK  T++M+PASG  L P S  +VTQV++V ++     KPL+MKL+I Y   G+   E+ QV  FP GF
Sbjct:  760 LTNFVFEAAVPKYITLKMQPASGTWLAPQS-ESVTQVMQVANTTNGE-KPLLMKLRIAYSLNGQDQQELGQVGNFPAGF 836          
BLAST of mRNA_C-tenellus_contig9728.1.1 vs. uniprot
Match: A0A2K2D540_BRADI (AP-1 complex subunit gamma n=2 Tax=Brachypodium distachyon TaxID=15368 RepID=A0A2K2D540_BRADI)

HSP 1 Score: 65.9 bits (159), Expect = 9.660e-11
Identity = 32/78 (41.03%), Postives = 50/78 (64.10%), Query Frame = 0
Query:    2 TKLMFQVAVPKAFTMRMEPASGHVLPPGSVAAVTQVIRVTSSLQSSTKPLMMKLKITYQQGGRTVTEVAQVAQFPPGF 79
            T+ +FQ AVPK   +R++PASG+++P     +VTQ   VT++ Q   KPL M+++++Y+  G    E  QV+ FPPG 
Sbjct:  661 TEFIFQAAVPKFIQLRLDPASGNIVPANGKGSVTQGFSVTNN-QHGQKPLAMRIRMSYKVNGEDRLEQGQVSNFPPGL 737          
BLAST of mRNA_C-tenellus_contig9728.1.1 vs. uniprot
Match: A0A453PZ92_AEGTS (GAE domain-containing protein n=1 Tax=Aegilops tauschii subsp. strangulata TaxID=200361 RepID=A0A453PZ92_AEGTS)

HSP 1 Score: 64.7 bits (156), Expect = 1.970e-10
Identity = 32/77 (41.56%), Postives = 49/77 (63.64%), Query Frame = 0
Query:    2 TKLMFQVAVPKAFTMRMEPASGHVLPPGSVAAVTQVIRVTSSLQSSTKPLMMKLKITYQQGGRTVTEVAQVAQFPPG 78
            T  +FQ AVPK   +R++PASG+++P     +VTQ   VT++ Q   KPL M+++++Y+  G    E  QV+ FPPG
Sbjct:  248 TDFIFQAAVPKFIQLRLDPASGNIVPANGKGSVTQGFSVTNN-QHGQKPLAMRIRMSYKVNGEDRLEQGQVSNFPPG 323          
BLAST of mRNA_C-tenellus_contig9728.1.1 vs. uniprot
Match: A0A446VT17_TRITD (GAE domain-containing protein n=5 Tax=Triticinae TaxID=1648030 RepID=A0A446VT17_TRITD)

HSP 1 Score: 64.7 bits (156), Expect = 2.400e-10
Identity = 32/77 (41.56%), Postives = 49/77 (63.64%), Query Frame = 0
Query:    2 TKLMFQVAVPKAFTMRMEPASGHVLPPGSVAAVTQVIRVTSSLQSSTKPLMMKLKITYQQGGRTVTEVAQVAQFPPG 78
            T  +FQ AVPK   +R++PASG+++P     +VTQ   VT++ Q   KPL M+++++Y+  G    E  QV+ FPPG
Sbjct:  399 TDFIFQAAVPKFIQLRLDPASGNIVPANGKGSVTQGFSVTNN-QHGQKPLAMRIRMSYKVNGEDRLEQGQVSNFPPG 474          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig9728.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A9SLN8_PHYPA4.270e-1246.67AP-1 complex subunit gamma n=1 Tax=Physcomitrium p... [more]
A0A2K1JQ28_PHYPA4.310e-1246.67AP-1 complex subunit gamma n=2 Tax=Physcomitrium p... [more]
A0A0A9VM58_ARUDO2.980e-1141.03AP-1 complex subunit gamma-2, putative n=1 Tax=Aru... [more]
D8TSS4_VOLCA3.800e-1149.37AP-1 complex subunit gamma n=1 Tax=Volvox carteri ... [more]
A0A453PYS8_AEGTS4.750e-1141.56GAE domain-containing protein n=1 Tax=Aegilops tau... [more]
F0YJH9_AURAN7.100e-1144.16AP-1 complex subunit gamma n=1 Tax=Aureococcus ano... [more]
A0A7S1F0P5_NOCSC7.100e-1145.57AP-1 complex subunit gamma n=1 Tax=Noctiluca scint... [more]
A0A2K2D540_BRADI9.660e-1141.03AP-1 complex subunit gamma n=2 Tax=Brachypodium di... [more]
A0A453PZ92_AEGTS1.970e-1041.56GAE domain-containing protein n=1 Tax=Aegilops tau... [more]
A0A446VT17_TRITD2.400e-1041.56GAE domain-containing protein n=5 Tax=Triticinae T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008152Clathrin adaptor, alpha/beta/gamma-adaptin, appendage, Ig-like subdomainPFAMPF02883Alpha_adaptinC2coord: 1..76
e-value: 2.1E-17
score: 63.4
NoneNo IPR availableGENE3D2.60.40.1230coord: 1..78
e-value: 9.0E-24
score: 85.9
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..33
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 16..33
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 34..79
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..15
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
IPR008153Gamma-adaptin ear (GAE) domainPROSITEPS50180GAEcoord: 1..76
score: 29.806
IPR013041Clathrin adaptor, appendage, Ig-like subdomain superfamilySUPERFAMILY49348Clathrin adaptor appendage domaincoord: 1..78

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig9728contigC-tenellus_contig9728:2702..3540 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig9728.1.1mRNA_C-tenellus_contig9728.1.1Choristocarpus tenellus KU2346mRNAC-tenellus_contig9728 2198..4962 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig9728.1.1 ID=prot_C-tenellus_contig9728.1.1|Name=mRNA_C-tenellus_contig9728.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=80bp
MTKLMFQVAVPKAFTMRMEPASGHVLPPGSVAAVTQVIRVTSSLQSSTKP
LMMKLKITYQQGGRTVTEVAQVAQFPPGF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008152Clathrin_a/b/g-adaptin_app_Ig
IPR008153GAE_dom
IPR013041Clathrin_app_Ig-like_sf