prot_C-tenellus_contig9616.1.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig9616.1.1
Unique Nameprot_C-tenellus_contig9616.1.1
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length70
Homology
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BLAST of mRNA_C-tenellus_contig9616.1.1 vs. uniprot
Match: D7FUH1_ECTSI (Putative methyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUH1_ECTSI)

HSP 1 Score: 88.6 bits (218), Expect = 6.650e-19
Identity = 39/64 (60.94%), Postives = 48/64 (75.00%), Query Frame = 0 
Query:    6 SPKNVVVQNNLGAALMSLGEHTEGLGYLEKALSMDPDNIDVMVNLGVHWQEEGDLPRARDYYIR 69
            SPKN V  NNLG AL++LG+  EGL  LEK+  +DP   DV+VNLG+HWQE+GDL RAR +Y R
Sbjct:  399 SPKNCVALNNLGVALLALGQQDEGLSMLEKSFELDPFEPDVLVNLGIHWQEDGDLDRARSFYTR 462
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig9616.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FUH1_ECTSI6.650e-1960.94Putative methyltransferase n=1 Tax=Ectocarpus sili... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019734Tetratricopeptide repeatSMARTSM00028tpr_5coord: 10..43
e-value: 2.9E-4
score: 30.2
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 10..43
score: 10.355
IPR001440Tetratricopeptide repeat 1PFAMPF00515TPR_1coord: 12..43
e-value: 1.2E-6
score: 28.0
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 3..70
e-value: 8.2E-14
score: 53.5
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 6..69
IPR013026Tetratricopeptide repeat-containing domainPROSITEPS50293TPR_REGIONcoord: 1..70
score: 16.334

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig9616contigC-tenellus_contig9616:2590..2799 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig9616.1.1mRNA_C-tenellus_contig9616.1.1Choristocarpus tenellus KU2346mRNAC-tenellus_contig9616 2590..2799 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig9616.1.1 ID=prot_C-tenellus_contig9616.1.1|Name=mRNA_C-tenellus_contig9616.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=70bp
DLSSWSPKNVVVQNNLGAALMSLGEHTEGLGYLEKALSMDPDNIDVMVNL
GVHWQEEGDLPRARDYYIRY
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019734TPR_repeat
IPR001440TPR_1
IPR011990TPR-like_helical_dom_sf
IPR013026TPR-contain_dom