mRNA_C-tenellus_contig9603.2.1 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig9603.2.1 vs. uniprot
Match: A0A8J1TYG1_OWEFU (Ofus.G073334 protein n=1 Tax=Owenia fusiformis TaxID=6347 RepID=A0A8J1TYG1_OWEFU) HSP 1 Score: 158 bits (399), Expect = 3.280e-42 Identity = 96/269 (35.69%), Postives = 153/269 (56.88%), Query Frame = 1 Query: 16 GIMSVSYYVFTSVLAYLNRLRVDRLS-KYGGEVSKEDPWKPSVTVHVVGYKEDPVYFLNCLLSVKDLQYSNIGAIILVIDGNEDDDWYMVDIANQVFGTE-AQSIRLEDNPRLTEVGYEQLEDVMRESQLLRLLCDYILMDRGNLNWSSKPIA----IQVYIIAQPHQGKREALYTAYKISQFVGTEFFLNTDSDTVLHPHCLDEMMVVTRDHPEIAGVAGMLTIFNVSNW-LSLLSASRYFMAFHVERAAQSFSGVVGCISGPLGLYR 801 G++++++Y+F + A +N+ ++D+L K GE V + +VGY+EDP YF NC++S +D Y I + +V+DGNE+ D YM + +VFG E I L+D ++D ++++++ + +Y L D +P +V I Q H+GKR A++ A ++ +G ++ + TDSDT L P+ L M+ + I V G + IFN + +S LSA RY+ AF++ERAAQS GVV C+SGPLGLYR Sbjct: 116 GVVTLTHYIFEMLFALVNKYKMDKLGRKVQGEQRASFKSNGKVALQIVGYREDPDYFRNCIISARDC-YGPIFVLCVVVDGNEEQDAYMAETITEVFGHENTMHIILDDIAA-------NIDDGKWKNEVVKPISEY-LGDGSEYTGKIRPYGGKHGFKVLTIRQLHEGKRSAMHCAMRLLIDLGIDYIMMTDSDTRLGPNSLAHMINLLESDNNIGAVTGNVDIFNANKSPVSFLSAVRYWFAFNMERAAQSLFGVVSCVSGPLGLYR 375
BLAST of mRNA_C-tenellus_contig9603.2.1 vs. uniprot
Match: A0A8J1TXF6_OWEFU (Ofus.G073338 protein (Fragment) n=1 Tax=Owenia fusiformis TaxID=6347 RepID=A0A8J1TXF6_OWEFU) HSP 1 Score: 154 bits (388), Expect = 2.880e-40 Identity = 96/265 (36.23%), Postives = 149/265 (56.23%), Query Frame = 1 Query: 16 GIMSVSYYVFTSVLAYLNRLRVDRLS-KYGGEVSKEDPWKPSVTVHVVGYKEDPVYFLNCLLSVKDLQYSNIGAIILVIDGNEDDDWYMVDIANQVFGTE-AQSIRLEDNPRLTEVGYEQLEDVMRESQLLRLLCDYILMDRGNLNWSSKPIAIQVYIIAQPHQGKREALYTAYKISQFVGTEFFLNTDSDTVLHPHCLDEMMVVTRDHPEIAGVAGMLTIFNVSNW-LSLLSASRYFMAFHVERAAQSFSGVVGCISGPLGLYR 801 G++++++Y+F + A +N+ ++D+L K G+ V + +VGY+EDP YF NC++S +D Y I + +V+DG+E+ D YM + +VFG E I L+D + G + E V S+ L +Y G + +V I Q H+GKR A++ A ++ +G ++ + TDSDT L P+ L M+ + I V G + IFN + +S LSA RY+ AF++ERAAQS GVV C+SGPLGLYR Sbjct: 129 GVVTLTHYIFEMLFALVNKYKMDKLGRKVLGKQRASFRCNGKVALQIVGYREDPDYFRNCIISARDC-YGPIYVLCVVVDGHEEQDAYMAETITEVFGHENTMHIILDDIAANIDDGKWKKEVVKPVSEYLGDGSEYT----GKIRPYGGKQGFKVLTIRQLHEGKRSAMHCAMRLLIDLGIDYIMMTDSDTRLGPNSLAHMINLLESDNNIGAVTGDIEIFNANKSPVSFLSAVRYWFAFNMERAAQSLFGVVWCVSGPLGLYR 388
BLAST of mRNA_C-tenellus_contig9603.2.1 vs. uniprot
Match: A0A8J1UZH8_OWEFU (Ofus.G26457 protein n=1 Tax=Owenia fusiformis TaxID=6347 RepID=A0A8J1UZH8_OWEFU) HSP 1 Score: 157 bits (397), Expect = 6.390e-40 Identity = 96/269 (35.69%), Postives = 153/269 (56.88%), Query Frame = 1 Query: 16 GIMSVSYYVFTSVLAYLNRLRVDRLS-KYGGEVSKEDPWKPSVTVHVVGYKEDPVYFLNCLLSVKDLQYSNIGAIILVIDGNEDDDWYMVDIANQVFGTE-AQSIRLEDNPRLTEVGYEQLEDVMRESQLLRLLCDYILMDRGNLNWSSKPIA----IQVYIIAQPHQGKREALYTAYKISQFVGTEFFLNTDSDTVLHPHCLDEMMVVTRDHPEIAGVAGMLTIFNVSNW-LSLLSASRYFMAFHVERAAQSFSGVVGCISGPLGLYR 801 G++++++Y+F + A +N+ ++D+L K GE V + +VGY+EDP YF NC++S +D Y I + +V+DGNE+ D YM + +VFG E I L+D ++D ++++++ + +Y L D +P +V I Q H+GKR A++ A ++ +G ++ + TDSDT L P+ L M+ + I V G + IFN + +S LSA RY+ AF++ERAAQS GVV C+SGPLGLYR Sbjct: 105 GVVTLTHYIFEMLFALVNKYKMDKLGRKVQGEQRASLRSNGKVALQIVGYREDPDYFRNCIISARDC-YGPIYVLCVVVDGNEEQDAYMAETITEVFGHENTMHIILDDIAA-------NIDDGKWKNEVVKPISEY-LGDGSEYTGKIRPYGGKHGFKVLTIRQLHEGKRSAMHCAMRLLIDLGIDYIMMTDSDTRLGPNSLAHMINLLESDNNIGAVTGNVDIFNANKSPVSFLSAVRYWFAFNMERAAQSLFGVVSCVSGPLGLYR 364
BLAST of mRNA_C-tenellus_contig9603.2.1 vs. uniprot
Match: A0A8J1V1A2_OWEFU (Ofus.G26461 protein n=1 Tax=Owenia fusiformis TaxID=6347 RepID=A0A8J1V1A2_OWEFU) HSP 1 Score: 155 bits (391), Expect = 4.310e-39 Identity = 96/266 (36.09%), Postives = 150/266 (56.39%), Query Frame = 1 Query: 16 GIMSVSYYVFTSVLAYLNRLRVDRLS-KYGGEVSKEDPWKPSVTVHVVGYKEDPVYFLNCLLSVKDLQYSNIGAIILVIDGNEDDDWYMVDIANQVFGTE-AQSIRLED-NPRLTEVGYEQLEDVMRESQLLRLLCDYILMDRGNLNWSSKPIAIQVYIIAQPHQGKREALYTAYKISQFVGTEFFLNTDSDTVLHPHCLDEMMVVTRDHPEIAGVAGMLTIFNVSNW-LSLLSASRYFMAFHVERAAQSFSGVVGCISGPLGLYR 801 G++++ +Y+ S A N++++ RL K GE K V + +VGY+EDP YF NC++S +D Y I + +V+DG+E+ D YM + +VFG E I L+D + E +++L V ++ L +Y G + +V I Q H+GKR ++ A ++ VG ++ + TDSDT+L P+CL + + E+ V G + IFN + +S LSA +Y+ AF++ERAAQS GVV C+SGPLGLYR Sbjct: 735 GVVTMGHYISESFFAVANKIKMTRLGLKVQGEQRASYRCKGKVALQIVGYREDPDYFRNCIISARDC-YGPIYVLCVVVDGHEEQDAYMAETITEVFGHENTMQIVLDDLAANIEEEAWKELV-VNPVAEFLGDGSEYT----GAIREEGCEHNFKVLTIRQFHEGKRSVMHCAMRLLIDVGIDYIMMTDSDTLLEPNCLAHLTNLLESDDELGAVTGNVGIFNANESPISFLSAVKYWYAFNIERAAQSLFGVVSCVSGPLGLYR 994
BLAST of mRNA_C-tenellus_contig9603.2.1 vs. uniprot
Match: A0A8J1UZN2_OWEFU (Ofus.G24518 protein n=2 Tax=Owenia fusiformis TaxID=6347 RepID=A0A8J1UZN2_OWEFU) HSP 1 Score: 152 bits (383), Expect = 4.860e-38 Identity = 93/266 (34.96%), Postives = 150/266 (56.39%), Query Frame = 1 Query: 16 GIMSVSYYVFTSVLAYLNRLRVDRLS-KYGGEVSKEDPWKPSVTVHVVGYKEDPVYFLNCLLSVKDLQYSNIGAIILVIDGNEDDDWYMVDIANQVFGTEA--QSIRLEDNPRLTEVGYEQLEDVMRESQLLRLLCDYILMDRGNLNWSSKPIAIQVYIIAQPHQGKREALYTAYKISQFVGTEFFLNTDSDTVLHPHCLDEMMVVTRDHPEIAGVAGMLTIFNVSNW-LSLLSASRYFMAFHVERAAQSFSGVVGCISGPLGLYR 801 G++++S+Y+ S A +N+ ++ RL K G + V + +VGY+EDP YF NC+L+ +D I +I+V+DG+E+ D YM +I +VFG + Q I E + E ++ L V ++ L +Y G + + I +V I Q H+GKR A++ A ++ +G ++ + TDSDT+L P C+ + + + V G + IFN + +S LSA +Y+ AF++ER+AQS GVV C+SGPLGLYR Sbjct: 558 GLVTMSHYISESFFAIINKYKMSRLGRKVQGLKRANFRCEGKVALQIVGYREDPAYFRNCILTARDCA-GPIYVVIVVVDGHEERDAYMAEIVTEVFGPDVTMQIILDELAANIDEDAWQDLV-VKPVAEYLGDGSEYT----GAIREEDEEITYKVLAIRQLHEGKRSAMHCAMRLLIDLGLDYIMMTDSDTLLDPDCIAHLSNLIESDSSLGAVTGNVGIFNANESPISYLSAVKYWYAFNIERSAQSLFGVVSCVSGPLGLYR 817
BLAST of mRNA_C-tenellus_contig9603.2.1 vs. uniprot
Match: A0A6I9ITI1_CHRAS (Hyaluronan synthase 2 n=2 Tax=Afrotheria TaxID=311790 RepID=A0A6I9ITI1_CHRAS) HSP 1 Score: 143 bits (361), Expect = 1.930e-37 Identity = 100/270 (37.04%), Postives = 143/270 (52.96%), Query Frame = 1 Query: 1 SAGEDGIMSVSYYVFTSVLAYLNRLRVDRLSKYGGEVSKEDPWKPSVTVH--VVGYKEDPVYFLNCLLSVKDLQYSNIGAIILVIDGNEDDDWYMVDIANQVFGTEAQSIRLEDNPRLTEVGYEQLEDVMRESQLLRLLCDYILMDRGNLNWSSKPIAIQVYIIAQPHQGKREALYTAYKISQFVGTEFFLNTDSDTVLHPHCLDEMMVVTRDHPEIAGVAGMLTIFN-VSNWLSLLSASRYFMAFHVERAAQSFSGVVGCISGPLGLYR 801 S G G S+ + S+ A+L ++ R S E P K + TV + Y+EDP Y CL SVK + Y I +++VIDGN DDD YM+DI ++V G + + + N E G + E +ES + Y+ L S+K I I Q GKRE +YTA++ + ++ DSDT+L P EM+ V + P + GV G + I N +W+S LS+ RY+MAF++ERA QS+ G V CISGPLG+YR Sbjct: 45 SFGLYGAFLASHLIIQSLFAFLEHRKMKR--------SLETPIKLNKTVALCIAAYQEDPTYLRKCLQSVKRITYPGI-KVVMVIDGNSDDDLYMMDIFSEVMGRDKSTTYIWKN-NFHEKGPGETEQSHKESSI------YVTQ----LVLSNKSICIM-----QKWGGKREVMYTAFR-ALGRSVDYVQVCDSDTMLDPASSVEMVKVLEEDPMVGGVGGDVQILNKYDSWISFLSSVRYWMAFNIERACQSYFGCVQCISGPLGMYR 288
BLAST of mRNA_C-tenellus_contig9603.2.1 vs. uniprot
Match: UPI001863B8A8 (hyaluronan synthase 3 n=1 Tax=Megalops cyprinoides TaxID=118141 RepID=UPI001863B8A8) HSP 1 Score: 145 bits (366), Expect = 2.020e-36 Identity = 98/270 (36.30%), Postives = 136/270 (50.37%), Query Frame = 1 Query: 1 SAGEDGIMSVSYYVFTSVLAYLNRLRVDRLSKYGGEVSKEDPWKPSVTVHVVGYKEDPVYFLNCLLSVKDLQYSNIGAIILVIDGNEDDDWYMVDIANQVFG--TEAQSIRLEDNPRLTEVGYEQLEDVMRESQLLRLLCDYILMDRGNLNWSSKPIAIQVYIIAQPHQGKREALYTAYKISQFVGTEFFLNTDSDTVLHPHCLDEMMVVTRDHPEIAGVAGMLTIFN-VSNWLSLLSASRYFMAFHVERAAQSFSGVVGCISGPLGLYR 801 S G G + V + AYL R+ R + G ++ P +PSV + + Y+EDP Y CL S + + + + ++LV+DGN +D YMVDI +VFG EA E N E E V R + R C +AQ GKRE +YTA+K + ++ DSDTVL P C EM+ + + PE+ GV G + I N +W+S LS+ RY+ AF+VERA QS+ G V CISGPLG+YR Sbjct: 55 SFGLYGAALGLHLVLQGLFAYLEHRRMRRPAA-GPGAARGPPRRPSVALCIAAYQEDPAYLRKCLRSARRVSFPGL-KVVLVVDGNRAEDGYMVDIFREVFGGGEEAGVAAWEGNYHARGAPAEDGERVARLVRSRRYSC-----------------------VAQRWGGKREVMYTAFK-ALGDSVDYVQVCDSDTVLDPACTVEMLKILEEDPEVGGVGGDVQILNKYDSWISFLSSVRYWTAFNVERACQSYFGCVQCISGPLGMYR 298
BLAST of mRNA_C-tenellus_contig9603.2.1 vs. uniprot
Match: A0A835NTE1_9PASS (Hyaluronan synthase 2 n=179 Tax=Amniota TaxID=32524 RepID=A0A835NTE1_9PASS) HSP 1 Score: 146 bits (368), Expect = 2.090e-36 Identity = 100/270 (37.04%), Postives = 145/270 (53.70%), Query Frame = 1 Query: 1 SAGEDGIMSVSYYVFTSVLAYLNRLRVDRLSKYGGEVSKEDPWKPSVTVH--VVGYKEDPVYFLNCLLSVKDLQYSNIGAIILVIDGNEDDDWYMVDIANQVFGTEAQSIRLEDNPRLTEVGYEQLEDVMRESQLLRLLCDYILMDRGNLNWSSKPIAIQVYIIAQPHQGKREALYTAYKISQFVGTEFFLNTDSDTVLHPHCLDEMMVVTRDHPEIAGVAGMLTIFN-VSNWLSLLSASRYFMAFHVERAAQSFSGVVGCISGPLGLYR 801 S G G + +S+ + S+ AYL ++ R S E P K + TV + Y+EDP Y CLLSVK L Y I +++VIDGN +DD YM+DI ++ G ++ + + N + G + E+ RES + L S+K + I Q GKRE +YTA+K + ++ DSDT+L P EM+ V + P + GV G + I N +W+S LS+ RY+MAF++ERA QS+ G V CISGPLG+YR Sbjct: 132 SFGLYGAILLSHLIIQSLFAYLEHRKMKR--------SLETPIKLNKTVALCIAAYQEDPDYLRKCLLSVKRLTYPGI-KVVMVIDGNSEDDVYMMDIFTEIMGRDSCATYIWSN-NFHDKGPGETEESHRES----------MQHVSQLVLSNKSVCIM-----QKWGGKREVMYTAFK-ALGRSVDYVQVCDSDTMLDPASSVEMVKVLEEDPMVGGVGGDVQILNKYDSWISFLSSVRYWMAFNIERACQSYFGCVQCISGPLGMYR 375
BLAST of mRNA_C-tenellus_contig9603.2.1 vs. uniprot
Match: W5UAQ7_ICTPU (Hyaluronan synthase 2 n=5 Tax=Otophysi TaxID=186626 RepID=W5UAQ7_ICTPU) HSP 1 Score: 144 bits (364), Expect = 3.820e-36 Identity = 101/270 (37.41%), Postives = 141/270 (52.22%), Query Frame = 1 Query: 1 SAGEDGIMSVSYYVFTSVLAYLNRLRVDRLSKYGGEVSKEDPWK--PSVTVHVVGYKEDPVYFLNCLLSVKDLQYSNIGAIILVIDGNEDDDWYMVDIANQVFGTEAQSIRLEDNPRLTEVGYEQLEDVMRESQLLRLLCDYILMDRGNLNWSSKPIAIQVYIIAQPHQGKREALYTAYKISQFVGTEFFLNTDSDTVLHPHCLDEMMVVTRDHPEIAGVAGMLTIFN-VSNWLSLLSASRYFMAFHVERAAQSFSGVVGCISGPLGLYR 801 S G G + V + + S+ A L + R S E P K S+ + + Y+EDP Y CL+SVK L Y NI +I+VIDGN +DD YM+DI + G E + + N +G ++ E+ ES L L S+K + I Q GKRE +YTA+K + ++ DSDT+L P C EM V + P + GV G + I N +W+S LS+ RY+MAF++ERA QS+ G V CISGPLG+YR Sbjct: 54 SFGLYGAILVIHLIIQSLFALLEHRNMRR--------SMETPIKLNKSLALCIAAYQEDPNYLRKCLISVKRLTYPNI-KVIMVIDGNNEDDCYMMDIFRDIMGREKAATYVWKN-NYHHLGPDENEESYTES----------LQHVAQLVLSNKCVCIM-----QKWGGKREVMYTAFK-ALGKSVDYVQVCDSDTMLDPACSVEMAKVLEEDPMVGGVGGDVQILNKYESWVSFLSSVRYWMAFNIERACQSYFGCVQCISGPLGMYR 297
BLAST of mRNA_C-tenellus_contig9603.2.1 vs. uniprot
Match: A0A1Y1XFA1_9FUNG (Uncharacterized protein n=2 Tax=Neocallimastigaceae TaxID=29007 RepID=A0A1Y1XFA1_9FUNG) HSP 1 Score: 144 bits (364), Expect = 1.040e-35 Identity = 92/265 (34.72%), Postives = 143/265 (53.96%), Query Frame = 1 Query: 7 GEDGIMSVSYYVFTSVLAYLNRLRVDRLSKYGGEVSKEDPWKPSVTVHVVGYKEDPVYFLNCLLSVKDLQYSNIGAIILVIDGNEDDDWYMVDIANQVFGTEAQSIRLEDNPRLTEVGYEQLEDVMRESQLLRLLCDYILMDRGNLNWSSKPIAIQVYIIAQPHQGKREALYTAYKISQFVGTEFFLNTDSDTVLHPHCLDEMMVVTRDHPEIAGVAGMLTIFNVSNWLSLLSASRYFMAFHVERAAQSFSGVVGCISGPLGLYR 801 G G++ V +Y+ ++ AYLN +V + ++D S + VVGY+EDP F CL S+ L+Y+ II+V+DGNE++D YM DI ++VF R + T+ + +E M E + ++L+ + P+ I QPH GKR A+YT +++ E + TDSDT+L HC+ E+ + D+ + G + I+N LS LS+ RY+ AF++ER+AQSF V C+SGPLG+YR Sbjct: 172 GFYGLVIVIHYIIQAIFAYLNYRKVTKKKNR----RRKDWTGLSTGLLVVGYREDPELFRGCLKSITYLRYAKNERIIVVVDGNEEEDRYMGDIFSKVFS------RWDHRVITTDFRLQDIE--MFEQRAIKLV--------EEVKKCMGPVCIM-----QPHFGKRAAMYTGFQVLLQCQVEAVVVTDSDTILDTHCIKELAFMLDDN-FVGAATGDVRIWNTGTMLSFLSSLRYWFAFNMERSAQSFQNCVTCVSGPLGIYR 410 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig9603.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig9603.2.1 >prot_C-tenellus_contig9603.2.1 ID=prot_C-tenellus_contig9603.2.1|Name=mRNA_C-tenellus_contig9603.2.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=260bp MSVSYYVFTSVLAYLNRLRVDRLSKYGGEVSKEDPWKPSVTVHVVGYKEDback to top mRNA from alignment at C-tenellus_contig9603:4140..5841+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig9603.2.1 ID=mRNA_C-tenellus_contig9603.2.1|Name=mRNA_C-tenellus_contig9603.2.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=1702bp|location=Sequence derived from alignment at C-tenellus_contig9603:4140..5841+ (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig9603:4140..5841+ >mRNA_C-tenellus_contig9603.2.1 ID=mRNA_C-tenellus_contig9603.2.1|Name=mRNA_C-tenellus_contig9603.2.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=780bp|location=Sequence derived from alignment at C-tenellus_contig9603:4140..5841+ (Choristocarpus tenellus KU2346)back to top |