prot_C-tenellus_contig948.1.14 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig948.1.14
Unique Nameprot_C-tenellus_contig948.1.14
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length582
Homology
BLAST of mRNA_C-tenellus_contig948.1.14 vs. uniprot
Match: A0A6H5LCS2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LCS2_9PHAE)

HSP 1 Score: 305 bits (780), Expect = 2.570e-92
Identity = 196/470 (41.70%), Postives = 265/470 (56.38%), Query Frame = 0
Query:  128 KRRKGQKL-GILGVPRGWDERDCDYDDSEDETYTPSD--HTPPRMPSR-------RDRGSTRLRSRGVLIIEENSAVTNGTKSMSPRGILGISNEILSGAIIRPFMDTQSKCSLQRTCRDMKALINDPGVWEKLHLDANLIGSRSTQSGRVSHMSRDPLFFLARSVVRQSRFSRLVSVSLHGLNLGAMGTEPDLLVQLFKNSPLITRLKLWKSYVQDERLPQPESAVEKAIAEHLPGVRHLAIDIYTSNKGLKVLLEGCRQLQSLHITGRMDESYYRFTSDPYPSDQGMRAFADVGCLNLEALSLFYKSKITAVGVRYALE--SCPKLKSLTLVGLNFREYLQFEPIIPVLGCIRSLTVVDCGAKEQICASILTGCPRLCSLTVEECQGYVQPKLPIFLEKVLGYIRGSYPANSDPTTVT-LEDRTKLLMELRKEYSLPNGLIFR----------LSEAVNIHQRIAPFM 574
            KR+  +K+ GI G+P  W+  DCDYDDSEDE+YT       PP + +        + RGST + S         S V  G +      +  +S +++   IIRP++ + SKC+LQRTC  M+ L++ P  WE L L A++IG R+ +SGR S +SR PLFFLARSVV+Q RFS L +V + GLNLGAMG+ PDLLV LF++   IT L LWK+YV+DERLPQP+ +VE  IA+HLPGVRHLA+++  SN+GLKVLLEGC +L+SLHI  R + +    +   YP+D GM+AF  VG   LE L+L  K  I A G+R  L+  +CP+L+ LTLV          + I P +G + SLT+  C         IL  CP L S+ V    G +Q   P     +L Y+    P+      V  L  R  +L  +        GL             L  A  + +RIAPFM
Sbjct:  137 KRKSTRKVPGIFGIPVAWNVEDCDYDDSEDESYTQQSGGSGPPTVGATAFAAKCTKTRGSTSVSS------ATRSRVVRGGRRRGTDWMAELSADVVLHGIIRPYLCSTSKCALQRTCNQMRRLLDSPDAWETLDLRAHIIGRRTMKSGRQSILSRQPLFFLARSVVQQPRFSLLKTVDMQGLNLGAMGSTPDLLVTLFESCRHITTLNLWKTYVEDERLPQPQFSVETVIAQHLPGVRHLALEVDDSNRGLKVLLEGCTRLKSLHIGSRSNRAGDSISM--YPNDLGMKAFTTVGAPYLETLTLVDKFNIGAAGLRCLLDPSACPRLRKLTLVRTGRVNNHCLKAIAPAMGRLTSLTLDQCLVDPSTVQFILDKCPELTSIVVSTQHGLLQQ--PQGGRALLEYLLAQGPSKLSKIEVQRLSARGSVLGNVPHWLVQDPGLCATVLGWNSPRIVLGPAETVDERIAPFM 596          
BLAST of mRNA_C-tenellus_contig948.1.14 vs. uniprot
Match: D7FPP5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPP5_ECTSI)

HSP 1 Score: 274 bits (700), Expect = 3.930e-83
Identity = 167/383 (43.60%), Postives = 225/383 (58.75%), Query Frame = 0
Query:  209 ISNEILSGAIIRPFMDTQSKCSLQRTCRDMKALINDPGVWEKLHLDANLIGSRSTQSGRVSHMSRDPLFFLARSVVRQSRFSRLVSVSLHGLNLGAMGTEPDLLVQLFKNSPLITRLKLWKSYVQDERLPQPESAVEKAIAEHLPGVRHLAIDIYTSNKGLKVLLEGCRQLQSLHITGRMDESYYRFTSDPYPSDQGMRAFADVGCLNLEALSLFYKSKITAVGVRYALE--SCPKLKSLTLVGLNFREYLQFEPIIPVLGCIRSLTVVDCGAKEQICASILTGCPRLCSLTVEECQGYVQPKLPIFLEKVLGYIRGSYPANSDPTTVT-LEDRTKLLMELRKEYSLPNGLIFRLSE----------AVNIHQRIAPFMSVDD 578
            +S E++   IIRP++ + SKC+LQRTC  M  L++ P  WE L L A++IG R+ +SGR S +SR PLFFLARSVV+Q RFS L +V + GLNLGAMG+ PDLLV LF++   IT L LWK+YV+DERLPQP+ +VE  IA+HLPGV HLA+++  SN+GL+VLLEGC +L+SLHI  R +++    +   YP+D GM+AF  VG   LE L+L  K  I A G+R  L   +CP+L++LTLV          + I P +G + SLT+  C  K      IL  CP L S+ V    G +Q   P     +L Y+    P+      V  L  R  +L  +        GL   + E          A    +RIAPFM+  D
Sbjct:    4 LSTEVVLHGIIRPYLCSTSKCALQRTCNQMHRLLDTPDAWETLDLRAHVIGRRTMKSGRQSILSRQPLFFLARSVVQQPRFSLLKTVDMQGLNLGAMGSTPDLLVTLFESCRHITTLNLWKTYVEDERLPQPQFSVETVIAQHLPGVHHLALEVDASNRGLRVLLEGCTRLKSLHIGSRSNQAGDSISM--YPNDLGMKAFTAVGAPYLETLTLVDKVNIGAAGLRCLLNPSACPRLRTLTLVRTGRVNDHCLKAIAPAMGRLTSLTLDQCPVKPSTVQFILDKCPELTSMVVSTQHGLLQQ--PQDGRALLEYLLAQGPSRLSKIEVQRLSARGSVLGNVPYWLVQDPGLCATVLEWISPRIVIGPAETADERIAPFMAGRD 382          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig948.1.14 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5LCS2_9PHAE2.570e-9241.70Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FPP5_ECTSI3.930e-8343.60Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10Ribonuclease Inhibitorcoord: 229..513
e-value: 1.5E-23
score: 84.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 30..90
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 158..180
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 112..130
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 102..181
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 47..64
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 67..90
NoneNo IPR availablePANTHERPTHR38926F-BOX DOMAIN CONTAINING PROTEIN, EXPRESSEDcoord: 231..385
coord: 414..505
NoneNo IPR availableSUPERFAMILY52047RNI-likecoord: 292..502

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig948contigC-tenellus_contig948:847..9449 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig948.1.14mRNA_C-tenellus_contig948.1.14Choristocarpus tenellus KU2346mRNAC-tenellus_contig948 77..9803 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig948.1.14 ID=prot_C-tenellus_contig948.1.14|Name=mRNA_C-tenellus_contig948.1.14|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=582bp
MPNSSSDSDENELIHVARKKRRITPFLVSETSSDDDVPLGILRQRRAVSQ
QKKSTKSVGSESGRWSVIDQKKGKGKSCSHKTEGGENGWECCVKDEGLSG
RLMVGGGSHSSGKRRPKGKGKSKGNGGKRRKGQKLGILGVPRGWDERDCD
YDDSEDETYTPSDHTPPRMPSRRDRGSTRLRSRGVLIIEENSAVTNGTKS
MSPRGILGISNEILSGAIIRPFMDTQSKCSLQRTCRDMKALINDPGVWEK
LHLDANLIGSRSTQSGRVSHMSRDPLFFLARSVVRQSRFSRLVSVSLHGL
NLGAMGTEPDLLVQLFKNSPLITRLKLWKSYVQDERLPQPESAVEKAIAE
HLPGVRHLAIDIYTSNKGLKVLLEGCRQLQSLHITGRMDESYYRFTSDPY
PSDQGMRAFADVGCLNLEALSLFYKSKITAVGVRYALESCPKLKSLTLVG
LNFREYLQFEPIIPVLGCIRSLTVVDCGAKEQICASILTGCPRLCSLTVE
ECQGYVQPKLPIFLEKVLGYIRGSYPANSDPTTVTLEDRTKLLMELRKEY
SLPNGLIFRLSEAVNIHQRIAPFMSVDDSGG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032675LRR_dom_sf