mRNA_C-tenellus_contig9365.2.1 (mRNA) Choristocarpus tenellus KU2346

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-tenellus_contig9365.2.1
Unique NamemRNA_C-tenellus_contig9365.2.1
TypemRNA
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Homology
BLAST of mRNA_C-tenellus_contig9365.2.1 vs. uniprot
Match: A0A6H5KPV7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPV7_9PHAE)

HSP 1 Score: 341 bits (875), Expect = 3.390e-109
Identity = 185/319 (57.99%), Postives = 225/319 (70.53%), Query Frame = 1
Query:    1 ELCCQEDTPELTTWWAQYLESIGDHKKATIFYERAGDYLSLVRLCCQAGDLAK-----ASEIVEESGSAPATYHLARHLEAMGETAEAVGYYARSSRYNHAIRLARDHGMDSELMGFALKSRPSIMVSVAAHFESRGQLERAVQLYQKGGDVPRALDVCFRAGSGG---------------RPGMFDVLKTITEDLSGDTSPQVLGRCADFFIEHDQFEKAVALSIRGKQYVQAIRLCMDHKVTISEDMAEELSPPKDGEGVGSSGSARAVREGKRESKGIAKGGGXXGEGREQVLRELAKACKHQGNFHLACKKYTQV 897
            E   Q +  +L  WW+QYLES G+ +KA   Y RA DYLSLVRL CQ G + +     A EIV ESGSAPA YHLARHLEA+G TAEAV +YARS+R+NHAIRLA+DHGMDSELMGFALKSRPS+MVSVA + + +G+LE+AVQLYQK G+V +ALD+CFR+G+ G                P MF+ LK++ +DL    SPQVL RC +FF+ + QF+KAV L I  ++++QAI LC+ HKV ISEDMAEEL+P KDG G  S+        G+    G +KGG   G  RE VLRELAKACK QGNFHLACKKYTQ 
Sbjct:  136 EYITQGNNVQLLKWWSQYLESRGEFEKARKTYTRAQDYLSLVRLACQGGQVERVRHRQAIEIVNESGSAPAAYHLARHLEAVGRTAEAVSFYARSNRFNHAIRLAKDHGMDSELMGFALKSRPSLMVSVADYLQDKGELEKAVQLYQKAGEVTKALDLCFRSGAAGGEADQKHGGEGEGEKSPAMFEALKSMMDDLGSHASPQVLSRCVEFFVANGQFDKAVGLCITNRKHLQAIELCVAHKVPISEDMAEELTPKKDG-GESSNSGGXXXXXGRM---GKSKGGMAEGT-REDVLRELAKACKRQGNFHLACKKYTQA 449          
BLAST of mRNA_C-tenellus_contig9365.2.1 vs. uniprot
Match: D8LH96_ECTSI (Intraflagellar transport protein 140 puative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH96_ECTSI)

HSP 1 Score: 338 bits (866), Expect = 2.290e-102
Identity = 184/319 (57.68%), Postives = 222/319 (69.59%), Query Frame = 1
Query:    1 ELCCQEDTPELTTWWAQYLESIGDHKKATIFYERAGDYLSLVRLCCQAGDLAK-----ASEIVEESGSAPATYHLARHLEAMGETAEAVGYYARSSRYNHAIRLARDHGMDSELMGFALKSRPSIMVSVAAHFESRGQLERAVQLYQKGGDVPRALDVCFRAGS---------GGR------PGMFDVLKTITEDLSGDTSPQVLGRCADFFIEHDQFEKAVALSIRGKQYVQAIRLCMDHKVTISEDMAEELSPPKDGEGVGSSGSARAVREGKRESKGIAKGGGXXGEGREQVLRELAKACKHQGNFHLACKKYTQV 897
            E   Q +  +L  WW+QYLES G+ +KA   Y RA DYLSLVRL CQ G + +     A  IV ESGSAPA YHLARHLEA+G TAEAV +YARS+R+NHAIRLA+DHGMDSELMGFALKSRPS+MVSVA + + +G+LE+AVQLYQK G+V +ALD+CFR+G+         GG       P MF+ LK++ +DL    SPQVL RC +FF+ + QF+KAV L I  ++++QAI LC+ HKV ISEDMAEEL+P KDG   G+S           ESK     GG     RE VLRELAKACK QGNFHLACKKYTQ 
Sbjct: 1085 EYITQGNNVQLLKWWSQYLESRGEFEKARKTYTRAQDYLSLVRLACQGGQVERVRHRQAIGIVNESGSAPAAYHLARHLEAVGRTAEAVSFYARSNRFNHAIRLAKDHGMDSELMGFALKSRPSLMVSVADYLQDKGELEKAVQLYQKAGEVTKALDLCFRSGAASGEADQKHGGEGEGERSPAMFEALKSMMDDLGSHASPQVLSRCVEFFVANGQFDKAVGLCITNRKHLQAIELCVAHKVPISEDMAEELTPKKDGGESGNSXXXXXXXXXMGESK-----GGMAEGTREDVLRELAKACKRQGNFHLACKKYTQA 1398          
BLAST of mRNA_C-tenellus_contig9365.2.1 vs. uniprot
Match: A0A7S2CPX6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CPX6_9STRA)

HSP 1 Score: 320 bits (820), Expect = 1.290e-99
Identity = 163/299 (54.52%), Postives = 205/299 (68.56%), Query Frame = 1
Query:    1 ELCCQEDTPELTTWWAQYLESIGDHKKATIFYERAGDYLSLVRLCCQAGDLAKASEIVEESGSAPATYHLARHLEAMGETAEAVGYYARSSRYNHAIRLARDHGMDSELMGFALKSRPSIMVSVAAHFESRGQLERAVQLYQKGGDVPRALDVCFRAGSGGRPGMFDVLKTITEDLSGDTSPQVLGRCADFFIEHDQFEKAVALSIRGKQYVQAIRLCMDHKVTISEDMAEELSPPKDGEGVGSSGSARAVREGKRESKGIAKGGGXXGEGREQVLRELAKACKHQGNFHLACKKYTQV 897
            E       PEL  WWA Y ESIG + KA  FY RA +Y SLVR+ C   ++ +A  IVEE+ +A A Y+LAR+LE M E  EA+ YYA+S  YNHAIRLA++ G+DSELM +A+KSRPS+MV  A +FES+G+ E+AVQLYQKGGD+P+ALD+CF+AGS GR  MF+VLK I  DL   TSPQ + RCA+FFIEH QFEKAV L + GK+YV+AI LCM HKV ++++M E L+PPK+    G+S +  A  E                E R + LR LAKACK QG F LACKK+TQ 
Sbjct:  394 EYIAHSSDPELIKWWAGYCESIGQYDKARHFYHRAQNYFSLVRIACFNREIPRAKNIVEETNNAAAAYYLARYLEGMTEVQEAINYYAQSGCYNHAIRLAKNFGLDSELMSYAIKSRPSLMVECAVYFESKGEFEKAVQLYQKGGDIPKALDLCFKAGSQGRTSMFEVLKNIANDLDDQTSPQTVARCAEFFIEHGQFEKAVQLFMTGKRYVRAIDLCMQHKVKLTDEMVEGLTPPKETPPEGTSAADAAAME----------------EERLETLRALAKACKKQGAFQLACKKFTQA 676          
BLAST of mRNA_C-tenellus_contig9365.2.1 vs. uniprot
Match: A0A7S3Y5S0_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y5S0_HETAK)

HSP 1 Score: 306 bits (783), Expect = 5.360e-96
Identity = 160/295 (54.24%), Postives = 197/295 (66.78%), Query Frame = 1
Query:   13 QEDTPELTTWWAQYLESIGDHKKATIFYERAGDYLSLVRLCCQAGDLAKASEIVEESGSAPATYHLARHLEAMGETAEAVGYYARSSRYNHAIRLARDHGMDSELMGFALKSRPSIMVSVAAHFESRGQLERAVQLYQKGGDVPRALDVCFRAGSGGRPGMFDVLKTITEDLSGDTSPQVLGRCADFFIEHDQFEKAVALSIRGKQYVQAIRLCMDHKVTISEDMAEELSPPKDGEGVGSSGSARAVREGKRESKGIAKGGGXXGEGREQVLRELAKACKHQGNFHLACKKYTQV 897
            Q   P+L  WWA YLES G   KA  FY  A D+L+LVRL C   D  +A  +VE+SGS  A YHLAR  EA GE  EAVG YA S RYNHAIRLA+ +GMD EL+GFALKS P+  V VA +FE +G+ E+AV+LYQKGGD P+ALD+CF+AG+ GR G+FD L+ I E L  +TSPQVL RCA+FF+EH QFEKAVAL  +G++Y+QA+ LC+ HK+ I+E+MAEEL+P KD  G                              R++VL  LA+ACK QG  HLACKKYTQ 
Sbjct:  136 QGKDPKLLKWWAGYLESKGALDKARRFYAGAEDHLALVRLACYNQDFEEARRLVEKSGSRAAAYHLARQHEARGEVQEAVGQYAASGRYNHAIRLAKAYGMDLELVGFALKSDPAQTVDVARYFELKGEYEKAVELYQKGGDAPKALDLCFKAGAEGRKGVFDALRQIAEGLGEETSPQVLARCAEFFLEHQQFEKAVALYRKGRRYLQAVELCVQHKLKITEEMAEELTPDKDDPG------------------------------RKEVLCALARACKRQGGHHLACKKYTQA 400          
BLAST of mRNA_C-tenellus_contig9365.2.1 vs. uniprot
Match: A0A835YKN9_9STRA (Putative intraflagellar transport protein 140 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKN9_9STRA)

HSP 1 Score: 311 bits (797), Expect = 3.790e-93
Identity = 161/294 (54.76%), Postives = 202/294 (68.71%), Query Frame = 1
Query:   25 PELTTWWAQYLESIGDHKKATIFYERAGDYLSLVRLCCQAGDLAKASEIVEESGSAPATYHLARHLEAMGETAEAVGYYARSSRYNHAIRLARDHGMDSELMGFALKSRPSIMVSVAAHFESRGQLERAVQLYQKGGDVPRALDVCFRAGSGGRPGMFDVLKTITEDL---SGDTSPQVLGRCADFFIEHDQFEKAVALSIRGKQYVQAIRLCMDHKVTISEDMAEELSPPKDGEGVGSSGSARAVREGKRESKGIAKGGGXXGEGREQVLRELAKACKHQGNFHLACKKYTQV 897
            PEL  WWA+Y ESIGDH  A +FY RA D+LSLVRL C AGD+ KA+ IV ++GS  A YHLAR  E  GE  EAV  YARS  YNHA+RLA+ HGMD+ELM FA++SRPS+MV  A +FE +G+L++AVQLY KGGDV  AL++CF+AG+ G+ GMF++L+ ITE+L   SG T+PQVL +CA FF+EH Q EKAV+L I  KQY QA+ LC   KV I+E+MAE ++P KD           AV                    R Q+L+ELA+ CK QG++HLACKKYTQ 
Sbjct:  971 PELVKWWAKYCESIGDHAAARLFYARAADHLSLVRLACYAGDMNKAAAIVRDTGSVAAAYHLARQHEGRGEWQEAVALYARSRCYNHAMRLAKSHGMDAELMSFAMQSRPSLMVDAAQYFEDKGELDKAVQLYHKGGDVAHALEICFKAGADGQTGMFELLRAITEELGQASGSTNPQVLVQCAQFFLEHGQAEKAVSLYISSKQYRQALDLCATAKVKITEEMAESITPSKD-----------AVD-------------------RTQLLQELAQCCKRQGSYHLACKKYTQA 1234          
BLAST of mRNA_C-tenellus_contig9365.2.1 vs. uniprot
Match: A0A7S2RUZ9_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RUZ9_9STRA)

HSP 1 Score: 308 bits (789), Expect = 1.880e-92
Identity = 155/299 (51.84%), Postives = 205/299 (68.56%), Query Frame = 1
Query:    1 ELCCQEDTPELTTWWAQYLESIGDHKKATIFYERAGDYLSLVRLCCQAGDLAKASEIVEESGSAPATYHLARHLEAMGETAEAVGYYARSSRYNHAIRLARDHGMDSELMGFALKSRPSIMVSVAAHFESRGQLERAVQLYQKGGDVPRALDVCFRAGSGGRPGMFDVLKTITEDLSGDTSPQVLGRCADFFIEHDQFEKAVALSIRGKQYVQAIRLCMDHKVTISEDMAEELSPPKDGEGVGSSGSARAVREGKRESKGIAKGGGXXGEGREQVLRELAKACKHQGNFHLACKKYTQV 897
            E   +   PEL  WWA Y E+ G   KA  FY RA D+ SL+R+ C  G+ A+A +I+EESG A A Y LAR+LE   E  EA+ YYA S  YNHAIRLAR+ G+D ELM FALK+   +M+  A HFES+G LE+AVQLYQKGGD+P+ALD+CFRAG  GR  MFDVL+TI  +L  +T+PQ + RCA+FF+EH QFEKAV L + GK+Y++AI L + HKV I+++MAE ++PPK+ +      ++  + E K +   +       G+ R +VLR LA+ACK QG+F LACKK+TQ 
Sbjct:  785 EYIARSSDPELLKWWAGYCEAHGQFDKARHFYYRAQDHFSLIRIACVNGETARAKQIIEESGDASAAYFLARYLEGHNEIQEAINYYAVSKCYNHAIRLARNFGLDGELMSFALKASEPLMIDCAQHFESKGDLEKAVQLYQKGGDIPKALDLCFRAGGQGRSSMFDVLQTIAGELDENTNPQTVARCAEFFMEHGQFEKAVQLFVTGKRYIRAIDLAVQHKVKITDEMAEGMTPPKNAKAPSGQAASLHLGESKSDMDEV------PGDFRVEVLRALARACKKQGSFQLACKKFTQA 1077          
BLAST of mRNA_C-tenellus_contig9365.2.1 vs. uniprot
Match: A0A7S1UFU4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UFU4_9STRA)

HSP 1 Score: 281 bits (720), Expect = 1.130e-88
Identity = 134/227 (59.03%), Postives = 174/227 (76.65%), Query Frame = 1
Query:   28 ELTTWWAQYLESIGDHKKATIFYERAGDYLSLVRLCCQAGDLAKASEIVEESGSAPATYHLARHLEAMGETAEAVGYYARSSRYNHAIRLARDHGMDSELMGFALKSRPSIMVSVAAHFESRGQLERAVQLYQKGGDVPRALDVCFRAGSGGRPGMFDVLKTITEDLSGDTSPQVLGRCADFFIEHDQFEKAVALSIRGKQYVQAIRLCMDHKVTISEDMAEELSPP 708
            EL  WWA Y ES+ D  KA  +Y+RAGD LS VRL C   DL +A++I+ ++ SA A YH+ARHLE + E  EA+ YY +S  YNHAIRLA+ HG+D+ELM FALKSRPS+MV  AA+FE +G++E+AVQLYQKGGD+P+ALD+CFRAG+ GR  MFDVL+ IT++L   TSPQVL R A+F I+H+Q+EKAV L I G +  QAI LC+ H V I+++MAE+L+PP
Sbjct:  242 ELQRWWAAYCESVSDFDKARAYYKRAGDNLSRVRLACYNRDLERAADIINDTKSASAAYHMARHLEGINEIREAIVYYTKSGCYNHAIRLAKAHGLDAELMSFALKSRPSLMVDCAAYFEKKGEIEKAVQLYQKGGDIPKALDLCFRAGAEGRRSMFDVLRNITDELGATTSPQVLARSAEFLIQHEQYEKAVGLYITGNRRRQAIELCLMHNVRITDEMAEQLAPP 468          
BLAST of mRNA_C-tenellus_contig9365.2.1 vs. uniprot
Match: A0A7S2BSR4_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BSR4_9STRA)

HSP 1 Score: 281 bits (718), Expect = 3.300e-86
Identity = 142/293 (48.46%), Postives = 190/293 (64.85%), Query Frame = 1
Query:   19 DTPELTTWWAQYLESIGDHKKATIFYERAGDYLSLVRLCCQAGDLAKASEIVEESGSAPATYHLARHLEAMGETAEAVGYYARSSRYNHAIRLARDHGMDSELMGFALKSRPSIMVSVAAHFESRGQLERAVQLYQKGGDVPRALDVCFRAGSGGRPGMFDVLKTITEDLSGDTSPQVLGRCADFFIEHDQFEKAVALSIRGKQYVQAIRLCMDHKVTISEDMAEELSPPKDGEGVGSSGSARAVREGKRESKGIAKGGGXXGEGREQVLRELAKACKHQGNFHLACKKYTQV 897
            D   L  WWA Y ESIG   KA  FY RA  + +LV++     D+  A  IVEE+    ATY+LAR+LE   E  +A+ YYA+S  YNHAIRLA+++G+D  LM + +KSRP++MV  AAH E++G+ E+AVQLYQKGGD+P+ALD+CF+AGS GR  MFD LK +  +L   TSPQ + RCA+FFIEH QF KAV L I GK+Y +AI LC+ +KV ++E++A+ L+PPK+G                              E R++VLR LA+ACK QG+F LA KK+T+ 
Sbjct:  174 DDVALFKWWANYSESIGQMNKAQHFYSRASAHFNLVKVAIFMRDMQMARNIVEETNDTAATYYLARYLEGTSEIQDAIDYYAKSGCYNHAIRLAQNYGLDQALMSYGIKSRPALMVKCAAHLEAKGEYEKAVQLYQKGGDIPKALDLCFKAGSQGRTTMFDALKNMANELDEHTSPQTIARCAEFFIEHGQFNKAVQLLITGKKYNRAIDLCLTNKVKLTEELAKSLTPPKEGLAT---------------------------EERQEVLRSLARACKKQGSFQLAAKKFTEA 439          
BLAST of mRNA_C-tenellus_contig9365.2.1 vs. uniprot
Match: F0YHE0_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YHE0_AURAN)

HSP 1 Score: 278 bits (712), Expect = 1.160e-81
Identity = 143/290 (49.31%), Postives = 196/290 (67.59%), Query Frame = 1
Query:   28 ELTTWWAQYLESIGDHKKATIFYERAGDYLSLVRLCCQAGDLAKASEIVEESGSAPATYHLARHLEAMGETAEAVGYYARSSRYNHAIRLARDHGMDSELMGFALKSRPSIMVSVAAHFESRGQLERAVQLYQKGGDVPRALDVCFRAGSGGRPGMFDVLKTITEDLSGDTSPQVLGRCADFFIEHDQFEKAVALSIRGKQYVQAIRLCMDHKVTISEDMAEELSPPKDGEGVGSSGSARAVREGKRESKGIAKGGGXXGEGREQVLRELAKACKHQGNFHLACKKYTQV 897
            EL  WWA Y ES+G    A   YE AGD+ SLVR+ C + +  +A+EIV ES S    YHLARHLE  G+  EA+ Y+A+S  YNHAIRLAR + +D++L+ F++K+RPS+ V  A +FE +G+ E+AVQLYQKGG++ +ALD+CF+ G  GR  MF+VL  I+++L    SP V+ RCA+FF+EH Q+EKAV L I G +Y QAI LC +  V I++++AE ++PPK  E    S +  A R   + ++ IAK      E R +VL ELA+ACK Q +F LACKK+TQ 
Sbjct:  949 ELLKWWAGYCESLGHLDSAQHCYESAGDHYSLVRVACFSNETNRAAEIVHESRSTAGAYHLARHLEGRGDINEAIQYFAKSGCYNHAIRLARQYQLDTDLLQFSIKARPSLQVDCANYFEQKGEFEKAVQLYQKGGELAKALDLCFKVGGAGRAQMFEVLSNISKELDDTASPAVVARCAEFFVEHGQYEKAVKLYITGGRYAQAIALCSERHVAITDELAEAMTPPKHEEATSESNAFYAQR---KSTQHIAKR--LSAEERVEVLLELARACKKQNSFQLACKKFTQA 1233          
BLAST of mRNA_C-tenellus_contig9365.2.1 vs. uniprot
Match: F0Y713_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y713_AURAN)

HSP 1 Score: 275 bits (703), Expect = 2.660e-80
Identity = 143/290 (49.31%), Postives = 194/290 (66.90%), Query Frame = 1
Query:   28 ELTTWWAQYLESIGDHKKATIFYERAGDYLSLVRLCCQAGDLAKASEIVEESGSAPATYHLARHLEAMGETAEAVGYYARSSRYNHAIRLARDHGMDSELMGFALKSRPSIMVSVAAHFESRGQLERAVQLYQKGGDVPRALDVCFRAGSGGRPGMFDVLKTITEDLSGDTSPQVLGRCADFFIEHDQFEKAVALSIRGKQYVQAIRLCMDHKVTISEDMAEELSPPKDGEGVGSSGSARAVREGKRESKGIAKGGGXXGEGREQVLRELAKACKHQGNFHLACKKYTQV 897
            EL  WWA Y ES+G    A   YE AGD+ SLVR+ C + +  +ASEIV ES S    YHLARHLE  G+  EA+ Y+A+S  YNHAIRLAR + +D++L+ F++K+RPS+ V  A +FE +G+ E+AVQLYQKGG++ +ALD+CF+ G  GR  MF+VL  I+++L    SP V+ RCA+FF+EH Q+EKAV L I G +Y QAI LC +  V I++++AE ++PPK  E VG S +       +R  + I        E R +VL ELA+ACK Q +F LACKK+TQ 
Sbjct: 1378 ELLKWWAGYCESLGHLDSAQHCYESAGDHYSLVRVACFSNETNRASEIVHESRSTAGAYHLARHLEGRGDINEAIQYFAKSGCYNHAIRLARQYQLDTDLLQFSIKARPSLQVDCANYFEQKGEFEKAVQLYQKGGELAKALDLCFKVGGAGRAQMFEVLSNISKELDDTASPAVVARCAEFFVEHGQYEKAVKLYITGGRYAQAIALCSERHVAITDELAEAMTPPKH-ENVGESTTPTQRSLTRRAPRKITC------EERTEVLLELARACKKQNSFQLACKKFTQA 1660          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig9365.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KPV7_9PHAE3.390e-10957.99Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LH96_ECTSI2.290e-10257.68Intraflagellar transport protein 140 puative n=1 T... [more]
A0A7S2CPX6_9STRA1.290e-9954.52Hypothetical protein (Fragment) n=1 Tax=Florenciel... [more]
A0A7S3Y5S0_HETAK5.360e-9654.24Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A835YKN9_9STRA3.790e-9354.76Putative intraflagellar transport protein 140 n=1 ... [more]
A0A7S2RUZ9_9STRA1.880e-9251.84Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S1UFU4_9STRA1.130e-8859.03Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]
A0A7S2BSR4_9STRA3.300e-8648.46Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
F0YHE0_AURAN1.160e-8149.31Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
F0Y713_AURAN2.660e-8049.31Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig9365contigC-tenellus_contig9365:430..5204 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog2880.D8LH96
Preferred nameIFT140
PFAMsANAPC4_WD40,TPR_7
Model size906
Max annot lvl2759|Eukaryota
KEGG koko:K19672
Hectar predicted targeting categoryother localisation
GOsGO:0001501,GO:0001654,GO:0001655,GO:0001750,GO:0002119,GO:0002164,GO:0003002,GO:0003008,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005813,GO:0005815,GO:0005856,GO:0005929,GO:0005930,GO:0006810,GO:0006928,GO:0006950,GO:0006970,GO:0006972,GO:0006979,GO:0006996,GO:0007017,GO:0007018,GO:0007275,GO:0007368,GO:0007389,GO:0007399,GO:0007423,GO:0007507,GO:0007568,GO:0007600,GO:0007605,GO:0008104,GO:0008150,GO:0008340,GO:0008589,GO:0009266,GO:0009408,GO:0009628,GO:0009653,GO:0009790,GO:0009791,GO:0009792,GO:0009799,GO:0009855,GO:0009887,GO:0009888,GO:0009966,GO:0009987,GO:0010259,GO:0010638,GO:0010646,GO:0010970,GO:0015630,GO:0016043,GO:0021532,GO:0021915,GO:0022008,GO:0022607,GO:0022611,GO:0023051,GO:0030030,GO:0030031,GO:0030154,GO:0030182,GO:0030326,GO:0030705,GO:0030990,GO:0030991,GO:0031076,GO:0031344,GO:0031346,GO:0031503,GO:0032386,GO:0032388,GO:0032391,GO:0032501,GO:0032502,GO:0032838,GO:0032879,GO:0032886,GO:0032991,GO:0033036,GO:0033043,GO:0033365,GO:0034613,GO:0035107,GO:0035108,GO:0035113,GO:0035295,GO:0035721,GO:0035735,GO:0035845,GO:0035869,GO:0036064,GO:0040024,GO:0042073,GO:0042461,GO:0042733,GO:0042995,GO:0043005,GO:0043009,GO:0043010,GO:0043053,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044085,GO:0044087,GO:0044422,GO:0044424,GO:0044430,GO:0044441,GO:0044444,GO:0044446,GO:0044463,GO:0044464,GO:0044782,GO:0046530,GO:0046907,GO:0048468,GO:0048513,GO:0048518,GO:0048522,GO:0048562,GO:0048568,GO:0048583,GO:0048598,GO:0048666,GO:0048699,GO:0048701,GO:0048704,GO:0048705,GO:0048706,GO:0048731,GO:0048736,GO:0048856,GO:0048869,GO:0050789,GO:0050794,GO:0050877,GO:0050896,GO:0050954,GO:0051049,GO:0051050,GO:0051128,GO:0051130,GO:0051179,GO:0051234,GO:0051270,GO:0051272,GO:0051641,GO:0051649,GO:0055115,GO:0060041,GO:0060173,GO:0060271,GO:0060341,GO:0060429,GO:0060491,GO:0060632,GO:0061512,GO:0065007,GO:0070727,GO:0070925,GO:0071840,GO:0072001,GO:0072359,GO:0097014,GO:0097458,GO:0097542,GO:0097730,GO:0097731,GO:0097733,GO:0099111,GO:0099568,GO:0120025,GO:0120031,GO:0120032,GO:0120035,GO:0120036,GO:0120038,GO:1902017,GO:1902115,GO:1904888,GO:1905515,GO:1905796,GO:1905798,GO:1905799,GO:1905801,GO:1990403
Exons5
Evalue3.75e-103
EggNOG OGsKOG3617@1|root,KOG3617@2759|Eukaryota
Descriptionintraciliary retrograde transport
Cds size906
COG categoryT
BRITEko00000,ko03036
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680790172.6337726-CDS-C-tenellus_contig9365:429..6691680790172.6337726-CDS-C-tenellus_contig9365:429..669Choristocarpus tenellus KU2346CDSC-tenellus_contig9365 430..669 -
1680790172.6466222-CDS-C-tenellus_contig9365:1164..12811680790172.6466222-CDS-C-tenellus_contig9365:1164..1281Choristocarpus tenellus KU2346CDSC-tenellus_contig9365 1165..1281 -
1680790172.6575263-CDS-C-tenellus_contig9365:2197..24221680790172.6575263-CDS-C-tenellus_contig9365:2197..2422Choristocarpus tenellus KU2346CDSC-tenellus_contig9365 2198..2422 -
1680790172.6726265-CDS-C-tenellus_contig9365:2940..31051680790172.6726265-CDS-C-tenellus_contig9365:2940..3105Choristocarpus tenellus KU2346CDSC-tenellus_contig9365 2941..3105 -
1680790172.6822612-CDS-C-tenellus_contig9365:5045..52041680790172.6822612-CDS-C-tenellus_contig9365:5045..5204Choristocarpus tenellus KU2346CDSC-tenellus_contig9365 5046..5204 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig9365.2.1prot_C-tenellus_contig9365.2.1Choristocarpus tenellus KU2346polypeptideC-tenellus_contig9365 430..5204 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-tenellus_contig9365.2.1

>prot_C-tenellus_contig9365.2.1 ID=prot_C-tenellus_contig9365.2.1|Name=mRNA_C-tenellus_contig9365.2.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=302bp
ELCCQEDTPELTTWWAQYLESIGDHKKATIFYERAGDYLSLVRLCCQAGD
LAKASEIVEESGSAPATYHLARHLEAMGETAEAVGYYARSSRYNHAIRLA
RDHGMDSELMGFALKSRPSIMVSVAAHFESRGQLERAVQLYQKGGDVPRA
LDVCFRAGSGGRPGMFDVLKTITEDLSGDTSPQVLGRCADFFIEHDQFEK
AVALSIRGKQYVQAIRLCMDHKVTISEDMAEELSPPKDGEGVGSSGSARA
VREGKRESKGIAKGGGGGGEGREQVLRELAKACKHQGNFHLACKKYTQVE
G*
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mRNA from alignment at C-tenellus_contig9365:430..5204-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-tenellus_contig9365.2.1 ID=mRNA_C-tenellus_contig9365.2.1|Name=mRNA_C-tenellus_contig9365.2.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=4775bp|location=Sequence derived from alignment at C-tenellus_contig9365:430..5204- (Choristocarpus tenellus KU2346)
GAACTGTGCTGCCAGGAGGATACGCCGGAGCTAACAACTTGGTGGGCACA GTACCTGGAGTCAATTGGGGACCACAAGAAGGCAACCATTTTCTATGAAC GGGCTGGCGACTACCTGTCCCTTGTTAGACTGTGTTGCCAGGCGGGGGAT CTAGCCAAGGTAAGATCATATACTCACACAAGAAAAAATGCACCACACAA ACACACATAAACACACATAAACACACATAAACACACGCTTCCATTAATAC ACAGAAAGAAGCTGGTAGTGCTCCCTGGCACTTACTTCGGTCCGCAGTAT ACACCTCAAACTCTTTTCCTTGCCACCAAACCCCTCACACTTTGAACCTG AGAACCCAAGAGCTGCGTCACCCAGAGCAAGAATGCTGTCATCAATTCTT TCAAAGTCACAACTCTGAGTGCCTTTGAGTCCTGAAAAACGTGACCTGAA ACCAACAATAACTTCGCGCATACACTACTAGTTGATTTTATAACTGTGTA ACCATAATGTTGAAATGTTAGGAGTTTTGAGGGGAAGTCCCTCAAGCTGA CAATTCAAGGTTTAAAGAGCCCACGGCTCGTTGACAAGCCCTCCGATGCA TAATCTAAAACCAACATATGTGGCGTTTGCCCCCTGACCTACTCCCTGCC TGTATCATGTAGGTGCTTGGCTTGAGACTCAATTGTAGAAAAAAACAGAC AAGGCGTATGAATGAACTGAGGGAAGCACAGGGGAAGATTAAAAAAAAAA GCACTAAAACAACAAACTTTATGATTGGCCAATCACTAAACCCTTGAATA TTTGAGGAAGGGTGTTTGAAAAAGGAACTGGAAAGGCGTTCAAGCAAATG ACTGGTTTATCTCTGAAAAAAACAAGAAATGCTTTTGTCATTTGTCAAAT AAGAAAACTTTGGTGGGTTGCCGTGAGAAAATGGCGGTGGTATTCCGGAG CATTCCAGTACACACTTATCTTGCGCAAGCATTTTGATTGCCCATGTCCA GATGCTACACATTGCTAGAAGAGCTGGGTTGATTCCTGGCATCAAACACA CTTTGAAGTAGAATGTCACCAAATGTTCATGTCATAGTTAGTGCCTTCAG GTCATTGTCTACGTCGCACTAGCTGGGGTGTGCGGCATTACTTATCAGTT GTTTCCCAACACATTTCCAACTTGGACTTTCTTTCCTGGATGTTGGAGGT AAAGATGGGGGTTTTTGTGTCAGTTCAATCCTGTACTACCAAGTTCTGTT GCCCAAAAGGTAGATTTGTGAATGGAAGTAGTGCAACATCATCACACGTT GATGTTTATGAACATGAGCGATACTCCAGTAGCAATCTCCCGTGAAGAAA CAGCCTGAGCAAATCCTCATTAAGCACTCGAACACCCTCTCAGACAATGC CCAAAGGCTGTGCCATGTGCCAGACCATGAGAGTCCTAGTGGCTTGATTG TCTAGGAACAGGGGCAGTGTACCACGAATGTGTTAGATGATAATATCCTA GTATGCTAAGGGCCTTTATACGGCAATGTCATAGTCAAAACGTTCAAGAG TCCACAGTCATCCAAGAACCCATGAACAGCACACAGTAAGTGCAATCAGA CCATAAGGTTTTGTATTCAATGGATCAATAAATTGATAGGTCGTCCTATT AGAAACACTATGATAGTCCCAAATACTAACAATCAGTGGACGTATTTCAT TCAAATACTATTTAAGTGTCTTTTGTACATTCTGTACATACAATCCTTTC AGTAGAGCGACAAAATATTGTTTATTTTTTAGTGAAGCCCTAACACTATA ACACTCTAATAGTTTACTTCTATTACAAAATATTTGTACTGACTCTCAAG AATGTTTCAAACTGGGTCGAGATCACATGCTTACAGTACCACCCCAGGTG CACACAACCAACATGAAACTTCCAGTAAGATAAGAGGAAGTATACAATGC AATAGAAGCTGAAAAAATCCTATGAAGACAAAGATACCACCCTACATACG CCACTTACCTCCACGTTACACTCATGCTTCCTCCTCCTCCTCCTCCTCCT CCACCACCACCATCATCACCACCATCACCTGGTGGCGGCCTATCCATAGG CATCTGAAATTGTGGAGGAATCAGGATCGGCACCAGCCACATACCACCTC GCGCGTCACTTAGAGGCTATGGGTGAAACTGCAGAGGCCGTTGGGTATTA TGCAAGAAGTTCCCGATACAATCACGCAATACGTCTCGCAAGGGACCATG GAATGGATTCCGAGGTATGTTGAGTATTATATTGAACAGAGGAACACATT GGCTACACAGGACTTCACTACAACGTCCTTTTCGAGTCCAACTAGTTTTA GCTGTTTGTCCAGTTCATTTTTGCTTAGTGGCTTGCCTTTATTGCTTGGA AGGAAACATGGTGGAAATTGATAGCGAGGGGTGTAAGTGTATACATAGGG AAAGTGTTGCTAGGGTAGTGCAGTATGATAGCTGCAGCCTGTAGGTTTAA ATTGACACCATGAGACATGAGAGGAGGTGGTATATAATGAAGAAGACCGG GGGGTAGGGGATACGGTATGTCTGTCAATTCAACCTAATAGTACAACAGT ATATCTGTCACTTTAGGTCAACAGAATCTCATGCATGTCATGTCATGTCA TGTCATGTCAAGCCAATATTATTCGTTCACCATACGACTTCCTCCTCCCA CCCCTCCCTCAAGTGTTATCATCACTCACCAAGTACCTTCACTCGGATCC CTCAACCAATACATCCTTCACAATGATAATAGCTCATGGGGTTTGCACTC AAGAGCCGACCAAGTATCATGGTGTCAGTAGCTGCACATTTTGAGAGTAG AGGTCAGCTTGAGCGAGCTGTCCAGCTGTATCAAAAGGGTGGGGATGTGC CTCGGGCATTAGATGTTTGCTTCCGCGCTGGTTCGGGGGGCCGCCCTGGC ATGTTTGATGTCCTCAAGACAATCACTGAGGACTTGAGTGGCGACACTTC CCCCCAGGTATGACTTTCCTATGACTCAGTTTTACCTTTCCTAGCCAATC TTGTGTATGTATGAATAGTACATCTTTTCCATTTATTTTCCTTTACTCCA ACTGCCGTCTCACGTGTACATAATGTACAGTCTACTATAAATAGCCCTAA CCCTTCTATTGATGCAGGATAATACTGCAATGAACTCTCCCTGATGGAGA CAGAGTTAGAGGTTGGTTGTTGCAGTATGTATGTACTCTATGTAGTTGCT TGCTGAGTGTGTTGTCAAGCGACATGTACATCTATTCAATATGTACAGGA GGAGCATGGAAGGTAGGAGCAGGCATGTTTTGACTAGTTGGTTTAATTGC TGATGTTCCTACCAATGCAATTCATGTATTTCTTTTTTTTTACCTAACTG TCTTCAACAATCTATGAGCATGTATGTATATCTGTATTGGATTTATGACC CTGAACGGATGCAGCCCTACCCTCTTAAATGCTTTGGAGTTGTTTTTTTT CTGCTTTGAATGCATGTGTCTGTGTGTGTTGTGTTTGTGTTGTGTTGTGT TGTGTTGTGTTGTGTTGTGTTGTGCGTGTGTTGTGTGCGACCACATATGT GAATGTACATGTCATACCAAGCACTTTTTTTTGTCACAGTCATCATCTGC GAGGAAGGCGTTACTATAACAAATACTACATAGAACAAAATGTAGATGTG TTGACGATAACTTTCTGAGAAAAGAAATCTACATTTGCAACATTTTTCTG GTCCAATGGGCCACAAAGAAATAATAATAAAAGTGAACTCAAGCCGTACA ATACGAAGATGCACCCTACCTCAAAGTGCGTTTAGAAACCTACTTTGAAG TATACTACTCCGTATATACAATACCTGAGTGTAACCCTAACCCTAAGACT GCCTGTTGTATATCGTGAATCAGGTACTGGGGCGTTGTGCTGATTTCTTC ATTGAGCACGACCAGTTTGAGAAGGCAGTTGCCCTTTCCATTCGTGGAAA GCAATATGTGCAAGCAATCCGCCTTTGCATGGATCACAAGGTGGGTGGGG GGAATGACAAGATTGTCGTAGGTGTGAGTAGCCGCCGCCGCCAGTAGGCT ATCTTCAGGGAAAAGGAAGATCAGGCGTTGGCTCAGTGAGTCAGTCTGCA GGGGTCAAGAGCATTGATCGCAATATCCAACTTGACTAGTTCCTCCATTT TTTGCCCAAGCACGTGTTAGCATCCTCAGAGCAGATGCTCTATGACTCTC AACATTTACCCAATGTCTAGTGGGGAAACATTTCATTCCCATAGTATCCA GGAAGGACTAGGCAAGTGACCACGTGCTCCTTCCCGAGGAGGTTCATCAA CAGGGTTAGGGCTAGGGTTAGGGTTAGGGTTAGAAGTACTGAACAAAGTT GTACTCAAGAGAGGACAGCCTGCTTGTCTAAAGGCTTTCTCCACCTAAAC AATATCCTGAGACTGTACCTCGATTTTGTCACAGCTACTGATCCGAAAAA GAAATGTCATTTGTCACAACTTAAAACTGCATTAGGTCACGATAAGCGAG GATATGGCTGAGGAGTTGTCCCCTCCGAAAGATGGGGAAGGGGTTGGAAG CAGTGGGAGTGCACGCGCTGTAAGAGAAGGTAAAAGAGAAAGTAAAGGGA TTGCAAAGGGAGGAGGAGGAGGAGGAGAGGGGAGAGAACAAGTCCTCAGG GAACTCGCCAAAGCTTGCAAGCATCAAGGAAACTTCCACCTGGCGTGCAA GAAGTATACTCAGGTAGAGGGTTAG
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Coding sequence (CDS) from alignment at C-tenellus_contig9365:430..5204-

>mRNA_C-tenellus_contig9365.2.1 ID=mRNA_C-tenellus_contig9365.2.1|Name=mRNA_C-tenellus_contig9365.2.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=906bp|location=Sequence derived from alignment at C-tenellus_contig9365:430..5204- (Choristocarpus tenellus KU2346)
GAACTGTGCTGCCAGGAGGATACGCCGGAGCTAACAACTTGGTGGGCACA
GTACCTGGAGTCAATTGGGGACCACAAGAAGGCAACCATTTTCTATGAAC
GGGCTGGCGACTACCTGTCCCTTGTTAGACTGTGTTGCCAGGCGGGGGAT
CTAGCCAAGGCATCTGAAATTGTGGAGGAATCAGGATCGGCACCAGCCAC
ATACCACCTCGCGCGTCACTTAGAGGCTATGGGTGAAACTGCAGAGGCCG
TTGGGTATTATGCAAGAAGTTCCCGATACAATCACGCAATACGTCTCGCA
AGGGACCATGGAATGGATTCCGAGCTCATGGGGTTTGCACTCAAGAGCCG
ACCAAGTATCATGGTGTCAGTAGCTGCACATTTTGAGAGTAGAGGTCAGC
TTGAGCGAGCTGTCCAGCTGTATCAAAAGGGTGGGGATGTGCCTCGGGCA
TTAGATGTTTGCTTCCGCGCTGGTTCGGGGGGCCGCCCTGGCATGTTTGA
TGTCCTCAAGACAATCACTGAGGACTTGAGTGGCGACACTTCCCCCCAGG
TACTGGGGCGTTGTGCTGATTTCTTCATTGAGCACGACCAGTTTGAGAAG
GCAGTTGCCCTTTCCATTCGTGGAAAGCAATATGTGCAAGCAATCCGCCT
TTGCATGGATCACAAGGTCACGATAAGCGAGGATATGGCTGAGGAGTTGT
CCCCTCCGAAAGATGGGGAAGGGGTTGGAAGCAGTGGGAGTGCACGCGCT
GTAAGAGAAGGTAAAAGAGAAAGTAAAGGGATTGCAAAGGGAGGAGGAGG
AGGAGGAGAGGGGAGAGAACAAGTCCTCAGGGAACTCGCCAAAGCTTGCA
AGCATCAAGGAAACTTCCACCTGGCGTGCAAGAAGTATACTCAGGTAGAG
GGTTAG
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