mRNA_C-tenellus_contig9359.1.1 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig9359.1.1 vs. uniprot
Match: A0A6H5KHD0_9PHAE (BING4CT domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KHD0_9PHAE) HSP 1 Score: 123 bits (308), Expect = 5.970e-28 Identity = 66/93 (70.97%), Postives = 76/93 (81.72%), Query Frame = 2 Query: 590 YSTMVVPGAGEPNFDSYEANPFETSKQRREAEVHSLLDKLAPETISLDPSFVGRVDKDPMVLLKEQQELAEAANPR-KTTPREKNKTRGRSKV 865 YS+MVVPGAGEPNFD++EANPF+TSKQRRE+EV SLL+KL PETI LDPSFVGRVD DP+ L EQ+ + EAAN R +EK K RGRSKV Sbjct: 484 YSSMVVPGAGEPNFDTFEANPFQTSKQRRESEVVSLLEKLTPETIGLDPSFVGRVDADPVALQAEQRAIMEAANTRGPKVVKEKKKMRGRSKV 576
BLAST of mRNA_C-tenellus_contig9359.1.1 vs. uniprot
Match: A0A835ZC99_9STRA (U3 snoRNP-associated protein Utp7 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZC99_9STRA) HSP 1 Score: 112 bits (280), Expect = 1.820e-24 Identity = 60/94 (63.83%), Postives = 71/94 (75.53%), Query Frame = 2 Query: 590 YSTMVVPGAGEPNFDSYEANPFETSKQRREAEVHSLLDKLAPETISLDPSFVGRVDKDPMVLLKEQQELAEAANPR-KTTPREKNKTRGRSKVG 868 Y+T++VPGAGEPNFD++ ANPFET KQRRE EV +LLDKL PETI LDP+ V VD DP L E + L EAA+ R K PR KNK RGR+K+G Sbjct: 343 YATLLVPGAGEPNFDTFAANPFETRKQRREGEVKALLDKLGPETIMLDPAAVATVDADPEALRGELRALQEAADARPKAAPRAKNKMRGRNKIG 436
BLAST of mRNA_C-tenellus_contig9359.1.1 vs. uniprot
Match: A0A7S2RBW9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RBW9_9STRA) HSP 1 Score: 102 bits (255), Expect = 1.820e-23 Identity = 58/109 (53.21%), Postives = 74/109 (67.89%), Query Frame = 2 Query: 548 PFYPCLTIQLLETRYSTMVVPGAGEPNFDSYEANPFETSKQRREAEVHSLLDKLAPETISLDPSFVGRVDKDPMVLLKEQQELAEAANP--RKTTPREKNKTRGRSKVG 868 PF L I L + ++VVPGAGEPN+D+ EANPFE+ K+RREAEVH LLDKL PETI+LD F+G +D D L ++ EL +AA + R KNK +GRSK+G Sbjct: 20 PFEDALGIGKLRG-FESIVVPGAGEPNYDALEANPFESKKERREAEVHKLLDKLGPETIALDSEFIGAIDGDAASLERDMVELRQAARAGHEEKPKRMKNKMKGRSKIG 127
BLAST of mRNA_C-tenellus_contig9359.1.1 vs. uniprot
Match: W7TI68_9STRA (U3 snornp-associated protein utp7 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TI68_9STRA) HSP 1 Score: 103 bits (256), Expect = 4.530e-21 Identity = 55/87 (63.22%), Postives = 66/87 (75.86%), Query Frame = 2 Query: 536 LFFSPFYPCLTIQLLETRYSTMVVPGAGEPNFDSYEANPFETSKQRREAEVHSLLDKLAPETISLDPSFVGRVDKDPMVLLKEQQEL 796 L F PF L I + Y +MVVPGAGEPNFDS EANPF++ KQRREAEVH LLDKLAPETI+LDP +G VD+ P L+KEQ+++ Sbjct: 404 LRFRPFEDVLGIGH-KGGYVSMVVPGAGEPNFDSLEANPFQSRKQRREAEVHGLLDKLAPETITLDPRSIGAVDRQPDELMKEQRDM 489
BLAST of mRNA_C-tenellus_contig9359.1.1 vs. uniprot
Match: A0A4D9D172_9STRA (BING4CT domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D172_9STRA) HSP 1 Score: 103 bits (256), Expect = 6.880e-21 Identity = 55/87 (63.22%), Postives = 66/87 (75.86%), Query Frame = 2 Query: 536 LFFSPFYPCLTIQLLETRYSTMVVPGAGEPNFDSYEANPFETSKQRREAEVHSLLDKLAPETISLDPSFVGRVDKDPMVLLKEQQEL 796 L F PF L I + Y +MVVPGAGEPNFDS EANPF++ KQRREAEVH LLDKLAPETI+LDP +G VD+ P L+KEQ+++ Sbjct: 1618 LRFRPFEDVLGIGH-KGGYVSMVVPGAGEPNFDSLEANPFQSRKQRREAEVHGLLDKLAPETITLDPRSIGAVDRQPDELMKEQRDM 1703
BLAST of mRNA_C-tenellus_contig9359.1.1 vs. uniprot
Match: A0A7S3UTF9_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UTF9_HETAK) HSP 1 Score: 100 bits (249), Expect = 7.240e-21 Identity = 55/109 (50.46%), Postives = 80/109 (73.39%), Query Frame = 2 Query: 542 FSPFYPCLTIQLLETRYSTMVVPGAGEPNFDSYEANPFETSKQRREAEVHSLLDKLAPETISLDPSFVGRVDKDPMVLLKEQQELAEAANPRKTTPRE-KNKTRGRSKV 865 F P+ L + E ++++VVPGAGE NFDS+ ANPF+T+KQ+REAEV +LLDKL P+ I LDP +G VD++ + L KEQ+++AE+A+ R ++ +NK RGRSK+ Sbjct: 175 FRPYEDALGVGHSEG-FTSVVVPGAGEANFDSFAANPFQTTKQKREAEVQALLDKLQPDMIGLDPDVIGTVDRNHIELAKEQKQIAESADRRPEKEKKLRNKMRGRSKM 282
BLAST of mRNA_C-tenellus_contig9359.1.1 vs. uniprot
Match: L1J1L4_GUITC (BING4CT domain-containing protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1J1L4_GUITC) HSP 1 Score: 97.8 bits (242), Expect = 1.220e-19 Identity = 53/113 (46.90%), Postives = 76/113 (67.26%), Query Frame = 2 Query: 536 LFFSPFYPCLTIQLLETRYSTMVVPGAGEPNFDSYEANPFETSKQRREAEVHSLLDKLAPETISLDPSFVGRVDKDPMVLLKEQQELAEAAN--PRKTTPREKNKTRGRSKVG 868 ++F PF L I +S+++VPG+GEPNFDS+EANPF+ KQRREAE+H+LL+KL P+ ISL+P+F+G VD ++ E++ LA N R+ +EK RGR + G Sbjct: 224 VYFRPFEDVLGISHSHG-FSSILVPGSGEPNFDSFEANPFQNKKQRREAEIHALLEKLDPDMISLNPNFIGNVDTYDKDVIAEERRLAREENLTERQRQKKEKRHARGRDRAG 335
BLAST of mRNA_C-tenellus_contig9359.1.1 vs. uniprot
Match: A0A1Y3NKN8_PIRSE (BING4CT domain-containing protein n=1 Tax=Piromyces sp. (strain E2) TaxID=73868 RepID=A0A1Y3NKN8_PIRSE) HSP 1 Score: 97.8 bits (242), Expect = 1.310e-19 Identity = 57/108 (52.78%), Postives = 79/108 (73.15%), Query Frame = 2 Query: 542 FSPFYPCLTIQLLETRYSTMVVPGAGEPNFDSYEANPFETSKQRREAEVHSLLDKLAPETISLDPSFVGRVDKDPMVLLKEQQELA-EAANPR-KTTPREKNKTRGRS 859 F PF L I + +S++V+PG+GEPNFDS EANP+ET KQRRE EVH LL+KL PETI+L+P+F+G VD+ ++ E+++L EAA+P K PR++ TRG+S Sbjct: 264 FCPFEDILGISH-DKGFSSIVIPGSGEPNFDSLEANPYETVKQRREKEVHDLLEKLQPETIALNPNFIGSVDRASKDIINEEKKLEWEAAHPNEKFEPRKR--TRGKS 368
BLAST of mRNA_C-tenellus_contig9359.1.1 vs. uniprot
Match: A0A2R5FZI2_9STRA (WD repeat-containing protein 46 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5FZI2_9STRA) HSP 1 Score: 98.2 bits (243), Expect = 2.400e-19 Identity = 56/93 (60.22%), Postives = 71/93 (76.34%), Query Frame = 2 Query: 596 TMVVPGAGEPNFDSYEANPFETSKQRREAEVHSLLDKLAPETISLDPSFVGRVDK-DPMVLLKE-QQELAEAANPRKTTPREKNKTRGRSKVG 868 TMVVPGAG N+D++EANP+E++KQRRE EV LLDKL PE I LDP+ +G VD D ++ KE +QELAEAA K P+E+NK +GRSK+G Sbjct: 422 TMVVPGAGAANYDAFEANPYESTKQRREGEVQRLLDKLQPEMIVLDPNAIGGVDTADKTIIAKEREQELAEAAAA-KGGPKERNKMKGRSKIG 513
BLAST of mRNA_C-tenellus_contig9359.1.1 vs. uniprot
Match: A0A2V3IYI2_9FLOR (U3 small nucleolar RNA-associated protein 7 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IYI2_9FLOR) HSP 1 Score: 97.8 bits (242), Expect = 3.100e-19 Identity = 73/188 (38.83%), Postives = 95/188 (50.53%), Query Frame = 2 Query: 365 DVKMVRKVLRKLGKKYSTW--CSPSLGCSQRRPYSPLHISAYTHTYKS---------TKHRSLP*MQLLF---------FSPFYPCLTIQLLETRYSTMVVPGAGEPNFDSYEANPFETSKQRREAEVHSLLDKLAPETISLDPSFVGRVDKDPMVLLKEQQELAEAANPRKTTPRE-KNKTRGRSKV 865 D ++ LR K + T SPS C +R L A + T+ RS P M+ + F PF L + ET M+VPGAGEP FD+ NP+ET KQRR+ EV +L+DKL P TI LDPS VG VDKDP+ ++E +E+ AN K R K K +GRSK+ Sbjct: 291 DARLCFWDLRTFRKLFETNLPASPSALCVSQRQLVALSFGATVQIWSPFSKSYGLSVTQQRSQPYMRQTYSGNRITSLQFCPFEDVLAV-CHETGVRNMIVPGAGEPTFDTRAPNPYETRKQRRQNEVRTLIDKLPPATIMLDPSNVGTVDKDPVQRVREIREIQNRANLDKIQRRALKKKQKGRSKI 477 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig9359.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig9359.1.1 >prot_C-tenellus_contig9359.1.1 ID=prot_C-tenellus_contig9359.1.1|Name=mRNA_C-tenellus_contig9359.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=114bp MQLLFFSPFYPCLTIQLLETRYSTMVVPGAGEPNFDSYEANPFETSKQRRback to top mRNA from alignment at C-tenellus_contig9359:84..1449+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig9359.1.1 ID=mRNA_C-tenellus_contig9359.1.1|Name=mRNA_C-tenellus_contig9359.1.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=1366bp|location=Sequence derived from alignment at C-tenellus_contig9359:84..1449+ (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig9359:84..1449+ >mRNA_C-tenellus_contig9359.1.1 ID=mRNA_C-tenellus_contig9359.1.1|Name=mRNA_C-tenellus_contig9359.1.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=342bp|location=Sequence derived from alignment at C-tenellus_contig9359:84..1449+ (Choristocarpus tenellus KU2346)back to top |