prot_C-tenellus_contig9351.1.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig9351.1.1
Unique Nameprot_C-tenellus_contig9351.1.1
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length234
Homology
BLAST of mRNA_C-tenellus_contig9351.1.1 vs. uniprot
Match: D7FKS5_ECTSI (WD repeat, SAM and U-box domain containing 1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKS5_ECTSI)

HSP 1 Score: 273 bits (699), Expect = 2.960e-85
Identity = 154/195 (78.97%), Postives = 170/195 (87.18%), Query Frame = 0
Query:    1 MLGGPLLVRGTRLRDEFACPITRELMREPVIAADGHTYDKEAIEMWLRHHDTSPKTGQPMDHLFVVPNHNLKRLIKDLIAEKGEGLYVH--DATEEDDKXXXXXXXXXXXXXXXXXXXXXEGR--YRFALVTEHILVLKCLGPVDSDWNGKSFRVTQRGCIGGRKQPAHLGGADFMQFSDATVSRRHFEIVFNKQ 191
            ML GPLLVRG+ LRDEF+CPITRELMR+PVIAADGHTYD+EAIEMWLR+HDTSPKTGQPM+ L +VPN NL+RLIKDL+AE GEGLYV+  D+ EE   XXXXXXXXXXXXXXXXX    EG   YRFALVTE ILVLKCLGP DSDWN KSFRVT+RGC+GGRKQPA L GADFMQFSDATVSRRHF I+F+K+
Sbjct:    1 MLNGPLLVRGSALRDEFSCPITRELMRDPVIAADGHTYDREAIEMWLRNHDTSPKTGQPMEQLSLVPNLNLRRLIKDLLAEGGEGLYVYRVDSDEEGXXXXXXXXXXXXXXXXXXXGREKEGNREYRFALVTEQILVLKCLGPTDSDWNDKSFRVTERGCVGGRKQPAMLAGADFMQFSDATVSRRHFGIIFDKE 195          
BLAST of mRNA_C-tenellus_contig9351.1.1 vs. uniprot
Match: A0A835Z8M7_9STRA (WD repeat, SAM and U-box domain-containing 1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8M7_9STRA)

HSP 1 Score: 269 bits (687), Expect = 1.010e-84
Identity = 129/190 (67.89%), Postives = 147/190 (77.37%), Query Frame = 0
Query:    1 MLGGPLLVRGTRLRDEFACPITRELMREPVIAADGHTYDKEAIEMWLRHHDTSPKTGQPMDHLFVVPNHNLKRLIKDLIAEKGEGLYVHDATEEDDKXXXXXXXXXXXXXXXXXXXXXEGRYRFALVTEHILVLKCLGPVDSDWNGKSFRVTQRGCIGGRKQPAHLGGADFMQFSDATVSRRHFEIVFNK 190
            M+  P+LV+G RLRDEFACPITRELMR+PVIAADGHTYD+EAIEMWLR HDTSPK GQPMDHLF+VPNHNLKRLIKDLI E GEGLYV +   +                        +  YRFALV EH+L+LKCLGPV+SDWNGK+FRVT+RGC+GGRK PA L GADFM FSDATVSR+HFE+ F+K
Sbjct:    1 MITRPVLVKGHRLRDEFACPITRELMRDPVIAADGHTYDREAIEMWLRTHDTSPKAGQPMDHLFLVPNHNLKRLIKDLIYEGGEGLYVKEEGAD---------------------CGPDAPYRFALVPEHVLILKCLGPVESDWNGKTFRVTERGCVGGRKMPAELHGADFMHFSDATVSRKHFEVFFDK 169          
BLAST of mRNA_C-tenellus_contig9351.1.1 vs. uniprot
Match: A0A7S1XUU4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XUU4_9STRA)

HSP 1 Score: 192 bits (488), Expect = 1.830e-57
Identity = 94/183 (51.37%), Postives = 123/183 (67.21%), Query Frame = 0
Query:    5 PLLVRGTRLRDEFACPITRELMREPVIAADGHTYDKEAIEMWLRHHDTSPKTGQPMDHLFVVPNHNLKRLIKDLIAEKGEGLYVHDATEEDDKXXXXXXXXXXXXXXXXXXXXXEGRYRFALVTEHILVLKCLGPVDSDWNGKSFRVTQRGCIGGRKQPAHLGGADFMQFSDATVSRRHFEIV 187
            P LVRG +LRDEF CPITRELM++PVIAADGHTYD+ AIE WL +H  SPKTG+ M+ + ++ N NL +LI+DL+ E GEGLY+ ++ +  +                       G YR+AL+ + +L  KCLGP +S WNG+SFRV   G +GGR++P+ L   D + FSDATVSRRHFEIV
Sbjct:   41 PTLVRGGQLRDEFVCPITRELMKDPVIAADGHTYDRSAIEQWLLNHRRSPKTGEVMESVGLIRNINLLKLIRDLVNEGGEGLYMAESDKASENKSLP------------------GGYRYALLRQKVLTFKCLGPAESSWNGRSFRVFANGVLGGRRRPSKLTERDHVTFSDATVSRRHFEIV 205          
BLAST of mRNA_C-tenellus_contig9351.1.1 vs. uniprot
Match: D7FNJ7_ECTSI (Armadillo/beta-catenin repeat family protein / U-box domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNJ7_ECTSI)

HSP 1 Score: 201 bits (512), Expect = 9.240e-56
Identity = 105/191 (54.97%), Postives = 127/191 (66.49%), Query Frame = 0
Query:    8 VRGTRLRDEFACPITRELMREPVIAADGHTYDKEAIEMWLRHHDTSPKTGQPMDHLFVVPNHNLKRLIKDLIAEKGEGLYVH----DATEEDDKXXXXXXXXXXXXXXXXXXXXXEGRYR---FALVTEHILVLKCLGPVDSDWNGKSFRVTQRGCIGGRKQPAHLGGADFMQFSDATVSRRHFEIVFNKQ 191
            + G  LRD FACPIT ELMR+PV+  DGHTYD+EAIEMWLR + TSPKTG+P++ L +VPN NL+RLIKD + E GE LYV     D  ++DD                       G +R   FALVTE ILVLKCLG V    N +SFRVT+RGC+GGR QP  L GA+F+Q SDATVS+RHF I F+K+
Sbjct: 1037 MHGFTLRDAFACPITGELMRDPVVVEDGHTYDREAIEMWLRKYGTSPKTGEPIERLLLVPNLNLRRLIKDFLIEGGEELYVGGRDGDGGDQDDGSGEVDRDEGDGGESGWEERSGTGEHRECRFALVTEQILVLKCLGSVYPGGNIESFRVTERGCVGGRNQPNTLAGAEFVQISDATVSKRHFGIAFDKE 1227          
BLAST of mRNA_C-tenellus_contig9351.1.1 vs. uniprot
Match: A0A7R9UA93_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UA93_9STRA)

HSP 1 Score: 180 bits (457), Expect = 5.170e-50
Identity = 92/185 (49.73%), Postives = 117/185 (63.24%), Query Frame = 0
Query:    6 LLVRGTRLRDEFACPITRELMREPVIAADGHTYDKEAIEMWLRHHDTSPKTGQPMDHLFVVPNHNLKRLIKDLIAEKGEGLYVHDATEEDDKXXXXXXXXXXXXXXXXXXXXXEGRYRFALVTEHILVLKCLGPVDSDWNGKSFRVTQRGCIGGRKQPAHLGGADFMQFSDATVSRRHFEIVFNK 190
            +LVRG +LRDE+ CPITREL+R+PV+AADGHTY++ AIE WL  H  SPKT + M+   + PN NL +LI+DL+AE GEGLYV + TE                          G Y+ AL+ + +L LKCLGP DS WN +SFRV   G +GGR+ P      D + F DATVSRRHFEI+ N+
Sbjct:   50 VLVRGRQLRDEYVCPITRELLRDPVMAADGHTYERVAIEKWLVSHRRSPKTQKVMESNTLFPNINLLKLIRDLVAEGGEGLYVLEDTES-----------------MAEDSDMPGGYQNALLWQKVLTLKCLGPADSSWNNRSFRVFPHGVLGGRRTPTRQTDRDHIAFGDATVSRRHFEIIQNE 217          
BLAST of mRNA_C-tenellus_contig9351.1.1 vs. uniprot
Match: A0A482RTF3_9ARCH (FHA domain-containing protein (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RTF3_9ARCH)

HSP 1 Score: 167 bits (422), Expect = 2.640e-48
Identity = 85/190 (44.74%), Postives = 121/190 (63.68%), Query Frame = 0
Query:    7 LVRGTRLRDEFACPITRELMREPVIAADGHTYDKEAIEMWLRHHDTSPKTGQPMDHLFVVPNHNLKRLIKDLIAEKGEGLYVHDATEEDDKXXXXXXXXXXXXXXXXXXXXXEGRYRFALVTEHILVLKCLGPVDSDWNGKSFRVTQRGCIGGRKQ----PAHLGGADFMQFSDATVSRRHFEIVFNKQA 192
            ++RG ++RDEF CPIT ELMREPV+A+DGHTY+K AI+ WL+ + TSP++G+PMD+L  +PN NLK+LI+D+I E G G Y  D + +D                            F +  E +L+L+CLGP +SDWN +SF+V + GC+GGRK      A+L   + + F D TVSRRHFE+ ++K +
Sbjct:   17 VMRGMKIRDEFLCPITYELMREPVVASDGHTYEKNAIDKWLKTNHTSPRSGEPMDNL-CIPNINLKKLIQDIINEGGAGFYTSDISNKD--------------------------RIFEVCPEKVLILECLGPPESDWNLQSFQVNKLGCVGGRKHNPEDSANL--REIVLFKDITVSRRHFEVTYDKNS 177          
BLAST of mRNA_C-tenellus_contig9351.1.1 vs. uniprot
Match: A0A6H5KH40_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KH40_9PHAE)

HSP 1 Score: 169 bits (429), Expect = 2.330e-46
Identity = 104/142 (73.24%), Postives = 117/142 (82.39%), Query Frame = 0
Query:   53 SPKTGQPMDHLFVVPNHNLKRLIKDLIAEKGEGLYVH--DATEEDDKXXXXXXXXXXXXXXXXXXXXXEGR-YRFALVTEHILVLKCLGPVDSDWNGKSFRVTQRGCIGGRKQPAHLGGADFMQFSDATVSRRHFEIVFNKQ 191
            S +TGQPM+ L +VPN NL+RLIKDL+AE GEGLYV+  ++ EE D  XXXXXXXXXXXXXXX       R YRFALVTE ILVLKCLGP DSDWN KSFRVT+RGC+GGRKQPA L GADFMQFSDATVSRRHF I+F+K+
Sbjct:   15 SSQTGQPMEQLSLVPNLNLRRLIKDLLAEGGEGLYVYRVESDEEGDGPXXXXXXXXXXXXXXXGREKEGDREYRFALVTEQILVLKCLGPTDSDWNDKSFRVTERGCVGGRKQPAMLDGADFMQFSDATVSRRHFGIIFDKE 156          
BLAST of mRNA_C-tenellus_contig9351.1.1 vs. uniprot
Match: A0A6S8S2A9_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A6S8S2A9_9STRA)

HSP 1 Score: 166 bits (420), Expect = 2.640e-46
Identity = 89/178 (50.00%), Postives = 110/178 (61.80%), Query Frame = 0
Query:   13 LRDEFACPITRELMREPVIAADGHTYDKEAIEMWLRHHDTSPKTGQPMDHLFVVPNHNLKRLIKDLIAEKGEGLYVHDATEEDDKXXXXXXXXXXXXXXXXXXXXXEGRYRFALVT-EHILVLKCLGPVDSDWNGKSFRVTQRGCIGGRKQPAHLGGAD---FMQFSDATVSRRHFEI 186
            LRDEF CPITR+LMR+PVIA+DGHTYD++AIE WL  HDTSPK+G+ +    +VPNHNLKRL+ DL+ E G GLY                               E   R A +  E +L+LKCLGP +S+W+G++F V   GCIGGR++    G  D   FM F DATVSRRHFEI
Sbjct:   38 LRDEFTCPITRQLMRQPVIASDGHTYDRQAIETWLLTHDTSPKSGEVLSSNALVPNHNLKRLVDDLVREGGAGLYEK---------------------------CEEKIERHACIEKEPVLLLKCLGPAESEWHGRTFEVRSEGCIGGRRR----GDDDTTLFMAFGDATVSRRHFEI 184          
BLAST of mRNA_C-tenellus_contig9351.1.1 vs. uniprot
Match: A0A7S2NWM2_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2NWM2_9STRA)

HSP 1 Score: 171 bits (432), Expect = 3.400e-46
Identity = 103/216 (47.69%), Postives = 133/216 (61.57%), Query Frame = 0
Query:   11 TRLRDEFACPITRELMREPVIAADGHTYDKEAIEMWL------RHHDTSPKTGQPMDHLFVVPNHNLKRLIKDLIAE-KGEGLYVHDA---------TEEDDKXXXXXXXXXXXXXXXXXXXXX------------EGRYRFALVTEHILVLKCLGPVDSDWNGKSFRVTQRGCIGGRKQPA--------HLGGADFMQFSDATVSRRHFEIVFNK 190
            ++LRDEF CPITRE++ EPVIAADGHTYDK AIE W+      R   TSPKTG+ ++HL ++PNHNLKRL++D++ E +G+ LY  DA             DK            XXXXXXXXX              +   ALV E +L LKCLGP +S+WN +SF+VT+ GCIGGR++P          L    F+QF++ATVSRRHFEI ++K
Sbjct:   23 SKLRDEFTCPITREIISEPVIAADGHTYDKSAIEQWIHFMQNKRMKPTSPKTGEELEHLHLIPNHNLKRLLRDMLVEGRGDALYQPDADAMAKQQENASSSDKDAQSYNCDNVSSXXXXXXXXXVQTTVMANASASNSKGGMALVREKVLNLKCLGPNESEWNNRSFKVTESGCIGGRRRPTVTAEKQNDRLKQLHFIQFTEATVSRRHFEICYDK 238          
BLAST of mRNA_C-tenellus_contig9351.1.1 vs. uniprot
Match: A0A7S3MFD7_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3MFD7_9STRA)

HSP 1 Score: 164 bits (416), Expect = 7.100e-44
Identity = 83/182 (45.60%), Postives = 114/182 (62.64%), Query Frame = 0
Query:    8 VRGTRLRDEFACPITRELMREPVIAADGHTYDKEAIEMWLRHHDTSPKTGQPMDHLFVVPNHNLKRLIKDLIAEKGEGLYVHDATEEDDKXXXXXXXXXXXXXXXXXXXXXEGRYRFALVTEHILVLKCLGPVDSDWNGKSFRVTQRGCIGGRKQPAH--LGGADFMQFSDATVSRRHFEIV 187
            ++G ++RDEF CPIT ELMR+PV+A+DGHTY+K AIE WL++H  SP++G+PMD +  +PN N+K+LI+D+I E G G Y+ D + +D                            F +  E ILVL+CLGP +SDWN  SF+V + GCIGGRK   +  +   + + F D TVSRRHFEI 
Sbjct:   34 LKGMKIRDEFICPITYELMRDPVVASDGHTYEKAAIEKWLKNHKISPRSGEPMD-VLTIPNINIKKLIQDIINEGGHGFYMSDISNKD--------------------------RMFEVRPEKILVLECLGPPESDWNSLSFQVNRFGCIGGRKHNPNDNMNNREPILFKDITVSRRHFEIT 188          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig9351.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FKS5_ECTSI2.960e-8578.97WD repeat, SAM and U-box domain containing 1 n=1 T... [more]
A0A835Z8M7_9STRA1.010e-8467.89WD repeat, SAM and U-box domain-containing 1 n=1 T... [more]
A0A7S1XUU4_9STRA1.830e-5751.37Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]
D7FNJ7_ECTSI9.240e-5654.97Armadillo/beta-catenin repeat family protein / U-b... [more]
A0A7R9UA93_9STRA5.170e-5049.73Hypothetical protein (Fragment) n=1 Tax=Pinguiococ... [more]
A0A482RTF3_9ARCH2.640e-4844.74FHA domain-containing protein (Fragment) n=1 Tax=a... [more]
A0A6H5KH40_9PHAE2.330e-4673.24Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6S8S2A9_9STRA2.640e-4650.00Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7S2NWM2_9STRA3.400e-4647.69Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
A0A7S3MFD7_9STRA7.100e-4445.60Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003613U box domainSMARTSM00504Ubox_2coord: 16..78
e-value: 2.9E-25
score: 99.9
IPR003613U box domainPFAMPF04564U-boxcoord: 15..82
e-value: 9.8E-18
score: 64.1
IPR003613U box domainPROSITEPS51698U_BOXcoord: 12..85
score: 29.723
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10Zinc/RING finger domain, C3HC4 (zinc finger)coord: 8..99
e-value: 3.0E-27
score: 96.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 87..114
NoneNo IPR availablePANTHERPTHR46573WD REPEAT, SAM AND U-BOX DOMAIN-CONTAINING PROTEIN 1coord: 15..80
NoneNo IPR availableCDDcd16655RING-Ubox_WDSUB1_likecoord: 17..57
e-value: 6.64297E-23
score: 85.7335
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 13..83

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig9351contigC-tenellus_contig9351:1094..3832 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig9351.1.1mRNA_C-tenellus_contig9351.1.1Choristocarpus tenellus KU2346mRNAC-tenellus_contig9351 529..4273 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig9351.1.1 ID=prot_C-tenellus_contig9351.1.1|Name=mRNA_C-tenellus_contig9351.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=234bp
MLGGPLLVRGTRLRDEFACPITRELMREPVIAADGHTYDKEAIEMWLRHH
DTSPKTGQPMDHLFVVPNHNLKRLIKDLIAEKGEGLYVHDATEEDDKEED
NDELENREDGGRAGGRRGEGRYRFALVTEHILVLKCLGPVDSDWNGKSFR
VTQRGCIGGRKQPAHLGGADFMQFSDATVSRRHFEIVFNKQACPLPSPPL
PSRSFSARAPLQDALLLSVHVIPDPVFMLGLKS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003613Ubox_domain
IPR013083Znf_RING/FYVE/PHD