mRNA_C-tenellus_contig9351.1.1 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig9351.1.1 vs. uniprot
Match: D7FKS5_ECTSI (WD repeat, SAM and U-box domain containing 1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKS5_ECTSI) HSP 1 Score: 274 bits (701), Expect = 7.440e-81 Identity = 154/195 (78.97%), Postives = 170/195 (87.18%), Query Frame = 2 Query: 566 MLGGPLLVRGTRLRDEFACPITRELMREPVIAADGHTYDKEAIEMWLRHHDTSPKTGQPMDHLFVVPNHNLKRLIKDLIAEKGEGLYVH--DATEEDDKXXXXXXXXXXXXXXXXXXXXXEGR--YRFALVTEHILVLKCLGPVDSDWNGKSFRVTQRGCIGGRKQPAHLGGADFMQFSDATVSRRHFEIVFNKQ 1138 ML GPLLVRG+ LRDEF+CPITRELMR+PVIAADGHTYD+EAIEMWLR+HDTSPKTGQPM+ L +VPN NL+RLIKDL+AE GEGLYV+ D+ EE XXXXXXXXXXXXXXXXX EG YRFALVTE ILVLKCLGP DSDWN KSFRVT+RGC+GGRKQPA L GADFMQFSDATVSRRHF I+F+K+ Sbjct: 1 MLNGPLLVRGSALRDEFSCPITRELMRDPVIAADGHTYDREAIEMWLRNHDTSPKTGQPMEQLSLVPNLNLRRLIKDLLAEGGEGLYVYRVDSDEEGXXXXXXXXXXXXXXXXXXXGREKEGNREYRFALVTEQILVLKCLGPTDSDWNDKSFRVTERGCVGGRKQPAMLAGADFMQFSDATVSRRHFGIIFDKE 195
BLAST of mRNA_C-tenellus_contig9351.1.1 vs. uniprot
Match: A0A835Z8M7_9STRA (WD repeat, SAM and U-box domain-containing 1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8M7_9STRA) HSP 1 Score: 270 bits (689), Expect = 2.350e-80 Identity = 129/190 (67.89%), Postives = 147/190 (77.37%), Query Frame = 2 Query: 566 MLGGPLLVRGTRLRDEFACPITRELMREPVIAADGHTYDKEAIEMWLRHHDTSPKTGQPMDHLFVVPNHNLKRLIKDLIAEKGEGLYVHDATEEDDKXXXXXXXXXXXXXXXXXXXXXEGRYRFALVTEHILVLKCLGPVDSDWNGKSFRVTQRGCIGGRKQPAHLGGADFMQFSDATVSRRHFEIVFNK 1135 M+ P+LV+G RLRDEFACPITRELMR+PVIAADGHTYD+EAIEMWLR HDTSPK GQPMDHLF+VPNHNLKRLIKDLI E GEGLYV + + + YRFALV EH+L+LKCLGPV+SDWNGK+FRVT+RGC+GGRK PA L GADFM FSDATVSR+HFE+ F+K Sbjct: 1 MITRPVLVKGHRLRDEFACPITRELMRDPVIAADGHTYDREAIEMWLRTHDTSPKAGQPMDHLFLVPNHNLKRLIKDLIYEGGEGLYVKEEGAD---------------------CGPDAPYRFALVPEHVLILKCLGPVESDWNGKTFRVTERGCVGGRKMPAELHGADFMHFSDATVSRKHFEVFFDK 169
BLAST of mRNA_C-tenellus_contig9351.1.1 vs. uniprot
Match: A0A7S1XUU4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XUU4_9STRA) HSP 1 Score: 196 bits (497), Expect = 7.540e-55 Identity = 97/199 (48.74%), Postives = 128/199 (64.32%), Query Frame = 2 Query: 530 GEATGRHQCVEDMLGGPLLVRGTRLRDEFACPITRELMREPVIAADGHTYDKEAIEMWLRHHDTSPKTGQPMDHLFVVPNHNLKRLIKDLIAEKGEGLYVHDATEEDDKXXXXXXXXXXXXXXXXXXXXXEGRYRFALVTEHILVLKCLGPVDSDWNGKSFRVTQRGCIGGRKQPAHLGGADFMQFSDATVSRRHFEIV 1126 G + R + D P LVRG +LRDEF CPITRELM++PVIAADGHTYD+ AIE WL +H SPKTG+ M+ + ++ N NL +LI+DL+ E GEGLY+ ++ + + G YR+AL+ + +L KCLGP +S WNG+SFRV G +GGR++P+ L D + FSDATVSRRHFEIV Sbjct: 25 GLSPRRFPTMADGYASPTLVRGGQLRDEFVCPITRELMKDPVIAADGHTYDRSAIEQWLLNHRRSPKTGEVMESVGLIRNINLLKLIRDLVNEGGEGLYMAESDKASENKSLP------------------GGYRYALLRQKVLTFKCLGPAESSWNGRSFRVFANGVLGGRRRPSKLTERDHVTFSDATVSRRHFEIV 205
BLAST of mRNA_C-tenellus_contig9351.1.1 vs. uniprot
Match: D7FNJ7_ECTSI (Armadillo/beta-catenin repeat family protein / U-box domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNJ7_ECTSI) HSP 1 Score: 204 bits (518), Expect = 2.120e-52 Identity = 108/201 (53.73%), Postives = 132/201 (65.67%), Query Frame = 2 Query: 557 VEDMLGGPLLVRGTRLRDEFACPITRELMREPVIAADGHTYDKEAIEMWLRHHDTSPKTGQPMDHLFVVPNHNLKRLIKDLIAEKGEGLYVH----DATEEDDKXXXXXXXXXXXXXXXXXXXXXEGRYR---FALVTEHILVLKCLGPVDSDWNGKSFRVTQRGCIGGRKQPAHLGGADFMQFSDATVSRRHFEIVFNKQ 1138 + D+LG + G LRD FACPIT ELMR+PV+ DGHTYD+EAIEMWLR + TSPKTG+P++ L +VPN NL+RLIKD + E GE LYV D ++DD G +R FALVTE ILVLKCLG V N +SFRVT+RGC+GGR QP L GA+F+Q SDATVS+RHF I F+K+ Sbjct: 1029 LADLLGKEM--HGFTLRDAFACPITGELMRDPVVVEDGHTYDREAIEMWLRKYGTSPKTGEPIERLLLVPNLNLRRLIKDFLIEGGEELYVGGRDGDGGDQDDGSGEVDRDEGDGGESGWEERSGTGEHRECRFALVTEQILVLKCLGSVYPGGNIESFRVTERGCVGGRNQPNTLAGAEFVQISDATVSKRHFGIAFDKE 1227
BLAST of mRNA_C-tenellus_contig9351.1.1 vs. uniprot
Match: A0A7R9UA93_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UA93_9STRA) HSP 1 Score: 180 bits (457), Expect = 3.010e-46 Identity = 97/208 (46.63%), Postives = 122/208 (58.65%), Query Frame = 2 Query: 530 GEATGRHQCVEDMLGGPL------LVRGTRLRDEFACPITRELMREPVIAADGHTYDKEAIEMWLRHHDTSPKTGQPMDHLFVVPNHNLKRLIKDLIAEKGEGLYVHDATEEDDKXXXXXXXXXXXXXXXXXXXXXEGRYRFALVTEHILVLKCLGPVDSDWNGKSFRVTQRGCIGGRKQPAHLGGADFMQFSDATVSRRHFEIVFNK 1135 GE G GG + LVRG +LRDE+ CPITREL+R+PV+AADGHTY++ AIE WL H SPKT + M+ + PN NL +LI+DL+AE GEGLYV + TE G Y+ AL+ + +L LKCLGP DS WN +SFRV G +GGR+ P D + F DATVSRRHFEI+ N+ Sbjct: 27 GERPGEEGARPARGGGRMAATRAVLVRGRQLRDEYVCPITRELLRDPVMAADGHTYERVAIEKWLVSHRRSPKTQKVMESNTLFPNINLLKLIRDLVAEGGEGLYVLEDTES-----------------MAEDSDMPGGYQNALLWQKVLTLKCLGPADSSWNNRSFRVFPHGVLGGRRTPTRQTDRDHIAFGDATVSRRHFEIIQNE 217
BLAST of mRNA_C-tenellus_contig9351.1.1 vs. uniprot
Match: A0A482RTF3_9ARCH (FHA domain-containing protein (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RTF3_9ARCH) HSP 1 Score: 167 bits (422), Expect = 9.120e-45 Identity = 85/190 (44.74%), Postives = 121/190 (63.68%), Query Frame = 2 Query: 584 LVRGTRLRDEFACPITRELMREPVIAADGHTYDKEAIEMWLRHHDTSPKTGQPMDHLFVVPNHNLKRLIKDLIAEKGEGLYVHDATEEDDKXXXXXXXXXXXXXXXXXXXXXEGRYRFALVTEHILVLKCLGPVDSDWNGKSFRVTQRGCIGGRKQ----PAHLGGADFMQFSDATVSRRHFEIVFNKQA 1141 ++RG ++RDEF CPIT ELMREPV+A+DGHTY+K AI+ WL+ + TSP++G+PMD+L +PN NLK+LI+D+I E G G Y D + +D F + E +L+L+CLGP +SDWN +SF+V + GC+GGRK A+L + + F D TVSRRHFE+ ++K + Sbjct: 17 VMRGMKIRDEFLCPITYELMREPVVASDGHTYEKNAIDKWLKTNHTSPRSGEPMDNL-CIPNINLKKLIQDIINEGGAGFYTSDISNKD--------------------------RIFEVCPEKVLILECLGPPESDWNLQSFQVNKLGCVGGRKHNPEDSANL--REIVLFKDITVSRRHFEVTYDKNS 177
BLAST of mRNA_C-tenellus_contig9351.1.1 vs. uniprot
Match: A0A6S8S2A9_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A6S8S2A9_9STRA) HSP 1 Score: 166 bits (420), Expect = 8.950e-43 Identity = 89/178 (50.00%), Postives = 110/178 (61.80%), Query Frame = 2 Query: 602 LRDEFACPITRELMREPVIAADGHTYDKEAIEMWLRHHDTSPKTGQPMDHLFVVPNHNLKRLIKDLIAEKGEGLYVHDATEEDDKXXXXXXXXXXXXXXXXXXXXXEGRYRFALVT-EHILVLKCLGPVDSDWNGKSFRVTQRGCIGGRKQPAHLGGAD---FMQFSDATVSRRHFEI 1123 LRDEF CPITR+LMR+PVIA+DGHTYD++AIE WL HDTSPK+G+ + +VPNHNLKRL+ DL+ E G GLY E R A + E +L+LKCLGP +S+W+G++F V GCIGGR++ G D FM F DATVSRRHFEI Sbjct: 38 LRDEFTCPITRQLMRQPVIASDGHTYDRQAIETWLLTHDTSPKSGEVLSSNALVPNHNLKRLVDDLVREGGAGLYEK---------------------------CEEKIERHACIEKEPVLLLKCLGPAESEWHGRTFEVRSEGCIGGRRR----GDDDTTLFMAFGDATVSRRHFEI 184
BLAST of mRNA_C-tenellus_contig9351.1.1 vs. uniprot
Match: A0A6H5KH40_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KH40_9PHAE) HSP 1 Score: 169 bits (429), Expect = 9.150e-43 Identity = 104/142 (73.24%), Postives = 117/142 (82.39%), Query Frame = 2 Query: 722 SPKTGQPMDHLFVVPNHNLKRLIKDLIAEKGEGLYVH--DATEEDDKXXXXXXXXXXXXXXXXXXXXXEGR-YRFALVTEHILVLKCLGPVDSDWNGKSFRVTQRGCIGGRKQPAHLGGADFMQFSDATVSRRHFEIVFNKQ 1138 S +TGQPM+ L +VPN NL+RLIKDL+AE GEGLYV+ ++ EE D XXXXXXXXXXXXXXX R YRFALVTE ILVLKCLGP DSDWN KSFRVT+RGC+GGRKQPA L GADFMQFSDATVSRRHF I+F+K+ Sbjct: 15 SSQTGQPMEQLSLVPNLNLRRLIKDLLAEGGEGLYVYRVESDEEGDGPXXXXXXXXXXXXXXXGREKEGDREYRFALVTEQILVLKCLGPTDSDWNDKSFRVTERGCVGGRKQPAMLDGADFMQFSDATVSRRHFGIIFDKE 156
BLAST of mRNA_C-tenellus_contig9351.1.1 vs. uniprot
Match: A0A7S2NWM2_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2NWM2_9STRA) HSP 1 Score: 171 bits (432), Expect = 1.410e-42 Identity = 103/216 (47.69%), Postives = 133/216 (61.57%), Query Frame = 2 Query: 596 TRLRDEFACPITRELMREPVIAADGHTYDKEAIEMWL------RHHDTSPKTGQPMDHLFVVPNHNLKRLIKDLIAE-KGEGLYVHDA---------TEEDDKXXXXXXXXXXXXXXXXXXXXX------------EGRYRFALVTEHILVLKCLGPVDSDWNGKSFRVTQRGCIGGRKQPA--------HLGGADFMQFSDATVSRRHFEIVFNK 1135 ++LRDEF CPITRE++ EPVIAADGHTYDK AIE W+ R TSPKTG+ ++HL ++PNHNLKRL++D++ E +G+ LY DA DK XXXXXXXXX + ALV E +L LKCLGP +S+WN +SF+VT+ GCIGGR++P L F+QF++ATVSRRHFEI ++K Sbjct: 23 SKLRDEFTCPITREIISEPVIAADGHTYDKSAIEQWIHFMQNKRMKPTSPKTGEELEHLHLIPNHNLKRLLRDMLVEGRGDALYQPDADAMAKQQENASSSDKDAQSYNCDNVSSXXXXXXXXXVQTTVMANASASNSKGGMALVREKVLNLKCLGPNESEWNNRSFKVTESGCIGGRRRPTVTAEKQNDRLKQLHFIQFTEATVSRRHFEICYDK 238
BLAST of mRNA_C-tenellus_contig9351.1.1 vs. uniprot
Match: A0A7S3MFD7_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3MFD7_9STRA) HSP 1 Score: 164 bits (416), Expect = 2.330e-40 Identity = 83/182 (45.60%), Postives = 114/182 (62.64%), Query Frame = 2 Query: 587 VRGTRLRDEFACPITRELMREPVIAADGHTYDKEAIEMWLRHHDTSPKTGQPMDHLFVVPNHNLKRLIKDLIAEKGEGLYVHDATEEDDKXXXXXXXXXXXXXXXXXXXXXEGRYRFALVTEHILVLKCLGPVDSDWNGKSFRVTQRGCIGGRKQPAH--LGGADFMQFSDATVSRRHFEIV 1126 ++G ++RDEF CPIT ELMR+PV+A+DGHTY+K AIE WL++H SP++G+PMD + +PN N+K+LI+D+I E G G Y+ D + +D F + E ILVL+CLGP +SDWN SF+V + GCIGGRK + + + + F D TVSRRHFEI Sbjct: 34 LKGMKIRDEFICPITYELMRDPVVASDGHTYEKAAIEKWLKNHKISPRSGEPMD-VLTIPNINIKKLIQDIINEGGHGFYMSDISNKD--------------------------RMFEVRPEKILVLECLGPPESDWNSLSFQVNRFGCIGGRKHNPNDNMNNREPILFKDITVSRRHFEIT 188 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig9351.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig9351.1.1 >prot_C-tenellus_contig9351.1.1 ID=prot_C-tenellus_contig9351.1.1|Name=mRNA_C-tenellus_contig9351.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=234bp MLGGPLLVRGTRLRDEFACPITRELMREPVIAADGHTYDKEAIEMWLRHHback to top mRNA from alignment at C-tenellus_contig9351:529..4273+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig9351.1.1 ID=mRNA_C-tenellus_contig9351.1.1|Name=mRNA_C-tenellus_contig9351.1.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=3745bp|location=Sequence derived from alignment at C-tenellus_contig9351:529..4273+ (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig9351:529..4273+ >mRNA_C-tenellus_contig9351.1.1 ID=mRNA_C-tenellus_contig9351.1.1|Name=mRNA_C-tenellus_contig9351.1.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=702bp|location=Sequence derived from alignment at C-tenellus_contig9351:529..4273+ (Choristocarpus tenellus KU2346)back to top |