mRNA_C-tenellus_contig9350.2.2 (mRNA) Choristocarpus tenellus KU2346

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-tenellus_contig9350.2.2
Unique NamemRNA_C-tenellus_contig9350.2.2
TypemRNA
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Homology
BLAST of mRNA_C-tenellus_contig9350.2.2 vs. uniprot
Match: D8LLG8_ECTSI (Short-chain dehydrogenase/reductase SDR n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LLG8_ECTSI)

HSP 1 Score: 211 bits (536), Expect = 7.830e-59
Identity = 155/382 (40.58%), Postives = 191/382 (50.00%), Query Frame = 2
Query:  302 GSDDGVL-TAIITGANRGLGFALAERMSLLG-HRVVLTCRGEDEGRAALNLLRERSLGDR------------LSFYPLDVANEKSVRDFRHVCVEGYLGGRVDVIFNNAGVCL-----------EGCTSAVLLTTLAVNFYGALRVMDACLPS----------------------------MCQMGKGSVVWVTSGDGELCNLGSYPRNLLEGAKSRQVSVSPAVDVEAAIEKIISRYCHANDCE-------------EEIAFGPTPAYSLSKAAANAVVRTEGDALMTTS------------------GVLLAAVCPGDVLTRMCSVPLGEERQGLQSQGESGAQVISPAVAAQAVVKVALQQ-DVYPGGHFYRDGIRIPW 1192
            G D G+L   I+TGANRGLGFA+A+RM  LG +RVVL CR E EGR AL  LR +    R             SF+PLDV   +SV  FR  CV G+LGGRVD++FNNAGVC                + +L  TLAVNF+GAL V++AC+P+                            M  +   +VVW++SGDGELC LGS  R LL  A+S +   SP  D+ A     I+     N                EE+AFGPTPAYSLSKAA NA VRT    +   +                  GV L AVCPGDVLTRM S    EE     ++G++    +SP  AA  VV +AL   +  P G FYR G  I W
Sbjct:   47 GDDGGILRNVIVTGANRGLGFAIADRMLKLGSYRVVLACRNEQEGRDALERLRGKQQQRRQRQYGTIATNFLASFFPLDVTCPRSVEVFREDCVNGHLGGRVDILFNNAGVCFPEQDGNGPQNNRAAAAGILRETLAVNFFGALEVVEACVPALQAAAPMVARKEKKKAALMLEDNGATSTMTSLKPPTVVWISSGDGELCFLGSKWRGLLAEAQSLEDVKSPLSDLLATATDTITTTSKQNSTAPAGSQQEGEQGQVEEMAFGPTPAYSLSKAAVNAAVRTWAPCIQAPTVPAEAPENTKSRTGVRGGGVRLVAVCPGDVLTRMTSK---EE----MARGDA----VSPEEAAVEVVDLALSSANDIPAGRFYRHGEEIGW 417          
BLAST of mRNA_C-tenellus_contig9350.2.2 vs. uniprot
Match: A0A835YS44_9STRA (Short-chain dehydrogenase/reductase SDR n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YS44_9STRA)

HSP 1 Score: 160 bits (404), Expect = 1.010e-40
Identity = 126/313 (40.26%), Postives = 162/313 (51.76%), Query Frame = 2
Query:  323 TAIITGANRGLGFALAERMSLLGHRVVLTCRGEDEGRAALNLLRERSLGD-RLSFYPLDVANEKSVRDFRHVCVEGYLGGRVDVIFNNAGVCLEGCTSAVLLTTLAVNFYGALRVMDACLPSMCQMGKGSVVWVTSGDGELCNLGSYPRNLLEGAKSRQVSVSPAVDVEAAIEKIISRYCHANDCEEEIAFGPTPAYSLSKAAANAVVR-----------TEGDAL-----------MTTSGVLLAAVCPGDVLTRMCSVPLGEERQGLQSQGESGAQVISPAVAAQAVVKVALQQDVYPGGHFYRDGIRIPW 1192
            TA++TGA+RGLG A+A  +    + V+LT R E +G  A + L     G   ++F  LDV++  S++ F   C+     G +  +FNNAGVCL G   A L  +L VNFYG LRVM+ACLP M +  +G VV V+SGDGEL  L S     L  A++ Q       DV AA + I+ R   A D   E+AFG TPAYS+SKA  NA VR            EG AL            T     + AVCPGDV T M S       +  Q +G     V+S   AA  VV +A  ++   GG FYR G  IPW
Sbjct:   48 TALVTGASRGLGLAVATLLVQQDYHVILTARSEADGLKAASDLSAHCQGTGEITFRQLDVSSPDSIKHFATQCLPTLPSGSLTAVFNNAGVCLPGADIATLQYSLGVNFYGPLRVMEACLPFMDE--EGVVVNVSSGDGELLWLNSDIAEALRQAQTVQ-------DVRAAADDILQRA--ALDPGAELAFGATPAYSVSKALLNAAVRCRHGIPYAPDPAEG-ALNAGRASSRGGGSTAQRPAVIAVCPGDVRTLMAS------EEEAQREG-----VLSALEAAAHVVGLATWRERTAGGLFYRYGAVIPW 337          
BLAST of mRNA_C-tenellus_contig9350.2.2 vs. uniprot
Match: R1DJ38_EMIHU (Uncharacterized protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1DJ38_EMIHU)

HSP 1 Score: 135 bits (341), Expect = 2.060e-30
Identity = 104/294 (35.37%), Postives = 137/294 (46.60%), Query Frame = 2
Query:  323 TAIITGANRGLGFALAERMSLLGHRVVLTCRGEDEGRAALNLLRERSLGDRLSFYPLDVANEKSVRDFRHVCVEGYLGGRVDVIFNNAGVCLEGCTSAVLLTTLAVNFYGALRVMDACLPSMCQMGKGSVVWVTSGDGELCNLGSYPRNLLEGAKSRQVSVSPAVDVEAAIEKIISRYCHANDC----EEEIAFGPTPAYSLSKAAANAVVRTEGDALMTTSGVLLAAVCPGDVLTRMCSVPLGEERQGLQSQGESGAQVISPAVAAQAVVKVALQQDVYPGGHFYRDGIRIPW 1192
            TA++TGANRG+G A A R++ LG  VVL CR E   R A   L  R L         D    +S       C       RVD++ NNA VC  G    V L +   N      +  A LP M +  +G+V+ V+SGDGEL  L S     L GA S           E  + ++++R     D     +   A GPTPAYS+SKAA N   R  GDAL    GV + A CPGDV TRMCS    E     +S  +  A++ + A+        A + +    G F+R G  IP+
Sbjct:  295 TALVTGANRGIGLATAGRLAELGASVVLACRDESACREAAAALSVRGLAAEPYAASFDAECPRSTSALAAACASL----RVDLLVNNAAVCEPGWGRDVALRSFRTNVLAPATLTRAVLPGMLRRRRGAVLHVSSGDGELVFLSSDLAPRLAGAAS-----------ERELLRLLARLSRGRDGFRFPDRPPAHGPTPAYSVSKAALNRHTRLVGDALPRDGGVWVGAACPGDVRTRMCSCERHEGVASPESAADDLARLAAGALGGXXXEAAARRLE---SGRFWRAGRTIPF 570          
BLAST of mRNA_C-tenellus_contig9350.2.2 vs. uniprot
Match: A0A7S1GWA1_HEMAN (Hypothetical protein n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1GWA1_HEMAN)

HSP 1 Score: 125 bits (314), Expect = 6.450e-29
Identity = 103/291 (35.40%), Postives = 145/291 (49.83%), Query Frame = 2
Query:  335 TGANRGLGFALAERMSLLGHRVVLTCRGEDEGRAALNLLRERSLGDRLSFYPLDVANEKSVRDFRHVCVEGYLGGRVDVIFNNAGVCLEGCTSAVLLTTLAVNFYGALRVMDACLPSMCQMGKGSVVWVTSGDGELCNLGSYPRNLLEGAKSRQVSVSPAVDVEAAIEKIISRYCHANDCEEEIAFGPTPAYSLSKAAANAVVR-----TEGDALMTTSGVLLAAVCPGDVLTRMCSVPLGEERQGLQSQGESGAQVISPAVAAQAVVKVALQQDVYPGGHFYRDGIRIPW 1192
            TG NRGLG ALA  ++  G +V +  R                    +    LDV  + SV      C++G L    D++ +NAGVCLEG   ++    + VNF+GALR++ A  P+M + G G VV ++SG+GEL  L S  + LL           P+++    + +++       +  EE+AFGPTP+YS+SKA  NA+ R     T G     T GV   AVCPGDV T MC++   +E+ G          V+SP  AA  VV VAL  +    G F+R    IPW
Sbjct:    1 TGGNRGLGRALAWELAREGLQVWVAARNXXXXXXXXXXXXXXXXD--VESVQLDVGCDASVGGVAEQCLDGRLPVP-DLLISNAGVCLEGSDRSIFDHAMQVNFFGALRMIRALAPAMRRKG-GCVVNISSGEGELVYLCSRLQELL-----------PSIESVDELCRVMEACIDDAEGGEELAFGPTPSYSVSKAGLNALTRILACSTRGSPHDHTLGV--RAVCPGDVDTAMCTL---DEKDG----------VLSPEQAAIDVVWVALHPEECANGGFFRHRDSIPW 261          
BLAST of mRNA_C-tenellus_contig9350.2.2 vs. uniprot
Match: R1EIL5_EMIHU (DNA ligase (ATP) n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1EIL5_EMIHU)

HSP 1 Score: 130 bits (328), Expect = 3.890e-28
Identity = 96/252 (38.10%), Postives = 121/252 (48.02%), Query Frame = 2
Query:  323 TAIITGANRGLGFALAERMSLLGHRVVLTCRGEDEGRAALNLLRERSLGDRLSFYPLDVANEKSVRDFRHVCVEGYLGGRVDVIFNNAGVCLEGCTSAVLLTTLAVNFYGALRVMDACLPSMCQMGKGSVVWVTSGDGELCNLGSYPRNLLEGAKSRQVSVSPAVDVEAAIEKIISRYCHANDC----EEEIAFGPTPAYSLSKAAANAVVRTEGDALMTTSGVLLAAVCPGDVLTRMCSVPLGEERQGLQS 1066
            TA++TGANRG+G A A R++ LG  VVL CR E   R A   L  R L         D    +S       C       RVD++ NNA VC  G    V L +   N      +  A LP M +  +G+V+ V+SGDGEL  L S     L GA S           E  + ++++R     D     +   A GPTPAYS+SKAA N   R  GDAL    GV + A CPGDV TRMCS    E  +G+ S
Sbjct:    6 TALVTGANRGIGLATAGRLAELGASVVLACRDESACREAAAALSVRGLAAEPYAASFDAECPRSTSALAAACASL----RVDLLVNNAAVCEPGWGRDVALRSFRTNVLAPATLTRAVLPGMLRRRRGAVLHVSSGDGELVFLSSDLAPRLAGAAS-----------ERELLRLLARLSRGRDGFRFPDRPPAHGPTPAYSVSKAALNRHTRLVGDALPRDGGVWVGAACPGDVRTRMCSC---ERHEGVAS 239          
BLAST of mRNA_C-tenellus_contig9350.2.2 vs. uniprot
Match: A0A7S2ZT12_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZT12_9RHOD)

HSP 1 Score: 119 bits (298), Expect = 1.090e-26
Identity = 95/290 (32.76%), Postives = 139/290 (47.93%), Query Frame = 2
Query:  326 AIITGANRGLGFALAERMSLLGHRVVLTCRGEDEGRAALNLLRERSLGDRLSFYPLDVANEKSVRDFRHVCVEGYLGGRVDVIFNNAGVCLEGCTSAVLLTTLAVNFYGALRVMDACLPSMCQMGKGSVVWVTSGDGELCNLGSYPRNLLEGAKSRQVSVSPAVDVEAAIEKIISRYCHANDCEEEIAFGPTPAYSLSKAAANAVVRTEGDALMTTSGVLLAAVCPGDVLTRMCSVPLGEERQGLQSQGESGAQVISPAVAAQAVVKVALQ-QDVYPGGHFYRDGIRIPW 1192
            A++TGA RGLG A+ E ++ L H V+LT R  ++G       + +    R  F  LDV +E+S  +   V  + Y  G +DVI NNA VCLE  +S+ L   L VNF+GA+R + ACL  +       ++ V+SGDGE     +  R   EG +S    +    D     + +           EE+  G  P Y +SK A N   R   + L   SG+ + +VCPGDV TRM                 S ++  SP+ AA+A+ ++ +     Y  G F+RD   I W
Sbjct:    8 ALVTGATRGLGLAIVEELAGLNHHVLLTGRDVEKGYVEAGSFQRKGFDVR--FLELDVCDERSAENLALVVRDQY--GALDVIVNNAAVCLEEWSSSALTNCLEVNFFGAVRTV-ACLGQLLAK-DACILNVSSGDGESVWFSTAVRERFEGVQSTNALLDALRDFAEKADAVPP---------EEVVHGEQPTYKVSKFALNCYTRLLHNDL-NESGIRVLSVCPGDVRTRM---------------NPSASR--SPSDAAKAIAELVVGGPSTYQSGSFFRDREVISW 264          
BLAST of mRNA_C-tenellus_contig9350.2.2 vs. uniprot
Match: A0A7S0BP00_9RHOD (Hypothetical protein n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0BP00_9RHOD)

HSP 1 Score: 117 bits (293), Expect = 5.260e-26
Identity = 96/291 (32.99%), Postives = 144/291 (49.48%), Query Frame = 2
Query:  326 AIITGANRGLGFALAERMSLLGHRVVLTCRGEDEGRAALNLLRERSLGDRLSFYPLDVANEKSVRDFRHVCVEGYLGGRVDVIFNNAGVCLEGCTSAVLLTTLAVNFYGALRVMDACLPSMCQMGKGS-VVWVTSGDGELCNLGSYPRNLLEGAKSRQVSVSPAVDVEAAIEKIISRYCHANDCEEEIAFGPTPAYSLSKAAANAVVRTEGDALMTTSGVLLAAVCPGDVLTRMCSVPLGEERQGLQSQGESGAQVISPAVAAQAVVKVALQ-QDVYPGGHFYRDGIRIPW 1192
            A++TGA RGLG A+ E ++ L H V+LT R  ++G A     + +    R  F  LDV +E+S  +   V  + Y  G +DVI NNA VCLE  +S+ L+  L VN +GA+R +  CL  +  +G+ + +V V+SGDGE   L +  R   E  +S +V +    ++    + + S         +E+  G  P Y +SK A N   R   + L   SG+ + AVCPGDV            R G+            P+ AA+A+V++ +     Y  G FYRD   I W
Sbjct:    8 ALVTGATRGLGLAIVEVLAGLDHHVLLTGRDVEKGCAEAGSFQRKGFDVR--FLELDVCHERSAENLALVVRDQY--GALDVIVNNAAVCLEDWSSSALMDCLEVNLFGAVRTVS-CLGQL--LGEDACIVNVSSGDGESVWLSTAVRERFEKVQSTKVLLDVLRELAEKADSLPS---------QEVVHGEQPTYKVSKFALNCYTRLLHNDL-NESGIRVLAVCPGDV------------RTGMNPSASR-----CPSDAAKAIVELVVGGPSTYQSGGFYRDCEIISW 264          
BLAST of mRNA_C-tenellus_contig9350.2.2 vs. uniprot
Match: A0A7S2XFG2_9EUKA (Hypothetical protein n=1 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2XFG2_9EUKA)

HSP 1 Score: 117 bits (294), Expect = 9.310e-26
Identity = 98/307 (31.92%), Postives = 147/307 (47.88%), Query Frame = 2
Query:  323 TAIITGANRGLGFALAERMSLLGHRVVLTCRGEDEGR-AALNLLRE---RSLGDRLSFYPLDVANEKSVRDFRHVCVEGYLGGRVDVIFNNAGVCLEGCTSAVLLTTLAVNFYGALRVMDACLPSMCQMGKGS--------VVWVTSGDGELCNLGSYPRNLLEGAKSRQVSVSPAVDVEAAIEKIISRYCHANDCEEEIAFGPTPAYSLSKAAANAVVRTEGDALMTTSGVLLAAVCPGDVLTRMCSVPLGEERQGLQSQGESGAQVISPAVAAQAVVKVALQQD-----VYPGGHFYRDGIRIPW 1192
            T I+TG  RGLG+A+AERM+  G+ VV+  R E+ G  AA N+ R    R +G  +S+  LD+ N +S+ +FR  C     GG VDV+FNNA VCLEG    V  ++  +N  G L +++  +       +          V+ V+S +GEL          L  + +  +  + A D   A+ +++    +  D   E AFGPTP YS+SKAA  A+ +             + AVCPGDV T M +              E  +  +SPA A++ VV +AL            G F+R   ++ W
Sbjct:   22 TCIVTGGTRGLGYAIAERMARRGYDVVIAGRDENIGNEAATNIQRSISTRGVGT-VSYRKLDLENAESINNFRQWCRRNVEGG-VDVLFNNAAVCLEGSNVEVARSSFQINVIGPLALVEGLMEQQKMDDRRERRKSTQRCVINVSSSEGEL--------GYLHSSLAEALLTASASDDPQAVIRVLESIQNDFDPLLEYAFGPTPFYSVSKAALIALTQVLARRDPDGRSFAVHAVCPGDVSTSMMTP-------------EQESHAVSPAEASEDVVWLALAHPRRADGKLDHGKFWRYREQVEW 305          
BLAST of mRNA_C-tenellus_contig9350.2.2 vs. uniprot
Match: A0A2V8VPQ4_9BACT (Short-chain dehydrogenase n=2 Tax=unclassified Acidobacteria TaxID=305072 RepID=A0A2V8VPQ4_9BACT)

HSP 1 Score: 114 bits (286), Expect = 2.710e-25
Identity = 95/302 (31.46%), Postives = 133/302 (44.04%), Query Frame = 2
Query:  326 AIITGANRGLGFALAERMSLLGHRVVLTCRGEDEGRAALNLLRERSLGDRLSFYPLDVANEKSVRDFRHVCVEGYLGGRVDVIFNNAGVCLEGCTSA-------------VLLTTLAVNFYGALRVMDACLPSMCQMGKGSVVWVTSGDGELCNLGSYPRNLLEGAKSRQVSVSPAVDVEAAIEKIISRYCHANDCEEEIAFGPTPAYSLSKAAANAVVRTEGDALMTTSGVLLAAVCPGDVLTRMCSVPLGEERQGLQSQGESGAQVISPAVAAQAVVKVALQQDVYPGGHFYRDGIRIPW 1192
            A++TGANRG+GF    +++  G +VVL  R E +GRAA   LR+  L   + F PLDV+++ SVRDF     + +  GRVDV+ NNAG+ ++G                  L  T+ VN YGALRV  A LP M + G   ++ V+SG G+L  +                                               G  P Y +SK + NA+ R   D L  T G+ + A+CPG V T M                       +P   A  VV +A +++V P G F+RD   IPW
Sbjct:    8 AVVTGANRGIGFETCRQLAKHGMKVVLAARDEAKGRAAAERLRDEDLD--VDFAPLDVSDDGSVRDFARYIKKSF--GRVDVLVNNAGIMIDGNEEVGSGASGVMQAKIETLRRTMEVNVYGALRVTQALLPLMPKEGA-RIINVSSGMGQLAEMN----------------------------------------------GGWPGYRISKTSLNALTRIFADELKET-GIRVNAICPGWVKTDMGGAKAPR----------------TPPQGADTVVWLATEREV-PTGGFFRDRKPIPW 240          
BLAST of mRNA_C-tenellus_contig9350.2.2 vs. uniprot
Match: A0A7C2UBP4_9PROT (SDR family oxidoreductase n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A7C2UBP4_9PROT)

HSP 1 Score: 111 bits (277), Expect = 4.150e-24
Identity = 98/296 (33.11%), Postives = 132/296 (44.59%), Query Frame = 2
Query:  326 AIITGANRGLGFALAERMSLLGHRVVLTCRGEDEGRAALNLLRERSLGDRLSFYPLDVANEKSVRDFRHVCVEGYLGGRVDVIFNNAGVCLEGCTSAVL-------LTTLAVNFYGALRVMDACLPSMCQMGKGSVVWVTSGDGELCNLGSYPRNLLEGAKSRQVSVSPAVDVEAAIEKIISRYCHANDCEEEIAFGPTPAYSLSKAAANAVVRTEGDALMTTSGVLLAAVCPGDVLTRMCSVPLGEERQGLQSQGESGAQVISPAVAAQAVVKVALQQDVYPGGHFYRDGIRIPW 1192
            A++TGANRG+G  +A +++  G +VVLT R   +GRAAL  L E  +G  + ++ LDV +  S+R       E +  GRVDV+ NNAGV L+   S VL         TL  N  G L++M A +P M Q   G VV ++SG G+L  +G                                                TPAY +SK A NA+ RT    L  T GVL+ A+CPG V T M               G +  + +    AA   V +A   D  P G F+RD   IPW
Sbjct:    8 AVVTGANRGIGLEIARQLAKHGLKVVLTSRSAAKGRAALKSLGE--IGTHVQYHLLDVTSPVSIRALAAHVSERF--GRVDVLVNNAGVMLDPRGSRVLDARVKTFRDTLETNLLGPLQLMQALVPMMQQQRYGRVVNLSSGQGQLAEMGVG----------------------------------------------TPAYRVSKTALNALTRTAAAELNGT-GVLVNAMCPGWVRTDM--------------GGPNAPRTVEQ--AADTAVWLATLPDDGPTGGFFRDRQAIPW 236          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig9350.2.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LLG8_ECTSI7.830e-5940.58Short-chain dehydrogenase/reductase SDR n=2 Tax=Ec... [more]
A0A835YS44_9STRA1.010e-4040.26Short-chain dehydrogenase/reductase SDR n=1 Tax=Tr... [more]
R1DJ38_EMIHU2.060e-3035.37Uncharacterized protein n=1 Tax=Emiliania huxleyi ... [more]
A0A7S1GWA1_HEMAN6.450e-2935.40Hypothetical protein n=2 Tax=Hemiselmis andersenii... [more]
R1EIL5_EMIHU3.890e-2838.10DNA ligase (ATP) n=1 Tax=Emiliania huxleyi TaxID=2... [more]
A0A7S2ZT12_9RHOD1.090e-2632.76Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
A0A7S0BP00_9RHOD5.260e-2632.99Hypothetical protein n=2 Tax=Rhodosorus marinus Ta... [more]
A0A7S2XFG2_9EUKA9.310e-2631.92Hypothetical protein n=1 Tax=Lotharella oceanica T... [more]
A0A2V8VPQ4_9BACT2.710e-2531.46Short-chain dehydrogenase n=2 Tax=unclassified Aci... [more]
A0A7C2UBP4_9PROT4.150e-2433.11SDR family oxidoreductase n=1 Tax=Betaproteobacter... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig9350contigC-tenellus_contig9350:2165..4227 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LLG8
PFAMsadh_short
Model size1682
Max annot lvl2759|Eukaryota
KEGG rclassRC00005,RC00049,RC00397,RC00709
KEGG koko:K07192,ko:K13646
KEGG ReactionR03376,R03380,R04491
KEGG Pathwayko00310,ko00514,ko04910,map00310,map00514,map04910
Hectar predicted targeting categorysignal peptide
Exons3
Evalue6.08e-62
EggNOG OGsCOG1028@1|root,KOG1208@2759|Eukaryota
EC1.14.11.4,2.4.1.50,2.4.1.66
Descriptionoxidation-reduction process
Cds size1065
COG categoryIQ
BRITEko00000,ko00001,ko01000,ko01003,ko03036,ko04131,ko04147
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680790171.8559742-UTR-C-tenellus_contig9350:2164..22941680790171.8559742-UTR-C-tenellus_contig9350:2164..2294Choristocarpus tenellus KU2346UTRC-tenellus_contig9350 2165..2294 +
1680790171.905544-UTR-C-tenellus_contig9350:3740..42271680790171.905544-UTR-C-tenellus_contig9350:3740..4227Choristocarpus tenellus KU2346UTRC-tenellus_contig9350 3741..4227 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680790171.8716483-CDS-C-tenellus_contig9350:2294..25911680790171.8716483-CDS-C-tenellus_contig9350:2294..2591Choristocarpus tenellus KU2346CDSC-tenellus_contig9350 2295..2591 +
1680790171.8828242-CDS-C-tenellus_contig9350:2820..32101680790171.8828242-CDS-C-tenellus_contig9350:2820..3210Choristocarpus tenellus KU2346CDSC-tenellus_contig9350 2821..3210 +
1680790171.8931751-CDS-C-tenellus_contig9350:3362..37401680790171.8931751-CDS-C-tenellus_contig9350:3362..3740Choristocarpus tenellus KU2346CDSC-tenellus_contig9350 3363..3740 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig9350.2.2prot_C-tenellus_contig9350.2.2Choristocarpus tenellus KU2346polypeptideC-tenellus_contig9350 2295..3740 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-tenellus_contig9350.2.2

>prot_C-tenellus_contig9350.2.2 ID=prot_C-tenellus_contig9350.2.2|Name=mRNA_C-tenellus_contig9350.2.2|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=355bp
MYFGLSWVTQHLVFLLALHAYLTAVFSLVGLSTYAGRTPSKRALPLQAPA
RACHQRAGSDDGVLTAIITGANRGLGFALAERMSLLGHRVVLTCRGEDEG
RAALNLLRERSLGDRLSFYPLDVANEKSVRDFRHVCVEGYLGGRVDVIFN
NAGVCLEGCTSAVLLTTLAVNFYGALRVMDACLPSMCQMGKGSVVWVTSG
DGELCNLGSYPRNLLEGAKSRQVSVSPAVDVEAAIEKIISRYCHANDCEE
EIAFGPTPAYSLSKAAANAVVRTEGDALMTTSGVLLAAVCPGDVLTRMCS
VPLGEERQGLQSQGESGAQVISPAVAAQAVVKVALQQDVYPGGHFYRDGI
RIPW*
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mRNA from alignment at C-tenellus_contig9350:2165..4227+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-tenellus_contig9350.2.2 ID=mRNA_C-tenellus_contig9350.2.2|Name=mRNA_C-tenellus_contig9350.2.2|organism=Choristocarpus tenellus KU2346|type=mRNA|length=2063bp|location=Sequence derived from alignment at C-tenellus_contig9350:2165..4227+ (Choristocarpus tenellus KU2346)
GGGTGTTGGAACGAGGTCCTCGGTCTACATCAATCACTTTGAAAAGCATG TAGAATGTAACGCTCTTTTTCGCCACAGAGTGTTCGCCACAGAACATCAT TATCAAACACAAAGGATATTCTGATAGGACATGTACTTTGGGTTGAGTTG GGTGACCCAACACCTCGTATTCTTGCTAGCTTTACATGCCTACCTCACTG CAGTTTTTTCCCTGGTGGGTCTGTCCACATATGCTGGAAGAACTCCGTCG AAAAGGGCGCTGCCACTCCAAGCACCGGCTCGAGCATGTCACCAACGTGC AGGTTCGGATGATGGCGTCCTCACTGCAATAATCACCGGAGCTAATAGGG GACTAGGTTTTGCTCTCGCAGAGAGGATGTCTTTATTGGGGCACAGGGTC GTGCTTACATGCAGGGGAGAGGATGAGGTACGGAAAATAGTGCGTTGGCC ATGGGTTGCCTTCTCCACAAGTGACGACCTTCCCCGTCTCCAAAACTCCA CGTGTCATCCTCATTCCTTCTTGTTGGCATGTTCTGCCCCAATGACTCTA TACCTAATTAGGGGTTAAACCTAAATGTTTGTTACTTCCTCTTCCAACAT TTTTTCCTCGAACTCTCTCTTCCTTCCTCAATGACAACGGCGATGTCAAC CCCTAGGGAAGAGCTGCGCTGAACCTCCTCCGTGAGCGAAGTCTGGGGGA TCGTCTTTCGTTCTACCCTCTAGATGTAGCTAATGAGAAGAGCGTGCGCG ATTTTCGACACGTGTGCGTGGAGGGCTATCTTGGGGGGCGAGTGGACGTC ATCTTCAACAATGCCGGGGTATGCCTGGAAGGTTGTACAAGTGCAGTATT GTTGACTACGCTGGCGGTGAACTTTTATGGGGCGCTTCGGGTGATGGATG CATGCCTTCCGTCCATGTGCCAGATGGGGAAGGGGTCTGTGGTGTGGGTG ACCAGTGGGGACGGAGAGCTGTGCAACCTTGGCTCGTACCCTAGGAACCT TCTGGAGGGAGCTAAGTCCCGACAGGTGAGTGTTTCCCCAGCTGTTGTCA CTCGCGTGTTGTACCAACATGCCCCCTTCTTGCAGCACTTGATGAAAACT ATGGGGTATATGTATGAGGTATCAGCACTTTACCTTTTCTCAATCCCAAT GGTCATACCCCCAACCCGATTGAGTACCCCCCAACTCCCGTTTGGTAGGA TGTGGAGGCGGCAATAGAGAAAATTATCTCCAGGTATTGCCATGCCAATG ATTGCGAGGAAGAAATTGCCTTCGGGCCTACCCCTGCCTACAGCCTATCC AAGGCTGCCGCCAATGCTGTGGTTCGCACAGAAGGGGATGCCCTCATGAC TACTTCAGGTGTTCTTCTTGCTGCTGTCTGTCCTGGAGATGTTCTTACAC GGATGTGTTCTGTTCCGTTGGGGGAAGAGAGACAGGGACTACAAAGTCAG GGGGAGTCAGGGGCTCAGGTGATCAGCCCTGCTGTGGCAGCACAGGCAGT AGTGAAGGTGGCCTTGCAACAGGATGTCTACCCTGGTGGGCATTTCTATC GGGATGGCATTAGAATTCCATGGTAGAAGCTCTTCCTGAAGAAGACCAGA GTTTACCTTGTTGTTGGGTGAGGTGAAAAACGGCTGCACTCTTGCCTTGC AGAAGGTAAGTGAAGGGAGCAGGGAGGTTTATTTATTTACTTAACTCGTT CAGTTTTCCTATCCTTTTTTGGCCATATATAGACTTCAATGGTCTTCACC TGTATGTCAAGTGTGGTTGGAGATGTCTATATTAATATATATATATATAT GTATTTTTGTTGAACCAGGCATGACCTCTTATGCTCATATACCACTCAAC AAACAATCATACACGTTGTTTAATACGAGCTTCCCCTGCGATAGTCTCCC TTACACCTCAACCCATGTGTCAGAGTTATCTAAGTTCCTTCAACACTGAT ATTGTTGCTGCTTGCGCGAGCTCAGTCAACTGCATGGCTGCACAACCAAT CACCATCACTTTTGGGGTAGATTATTTACACACCAAGAAATCAAGTGAAA AACTGTAATCATG
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Coding sequence (CDS) from alignment at C-tenellus_contig9350:2165..4227+

>mRNA_C-tenellus_contig9350.2.2 ID=mRNA_C-tenellus_contig9350.2.2|Name=mRNA_C-tenellus_contig9350.2.2|organism=Choristocarpus tenellus KU2346|type=CDS|length=1065bp|location=Sequence derived from alignment at C-tenellus_contig9350:2165..4227+ (Choristocarpus tenellus KU2346)
ATGTACTTTGGGTTGAGTTGGGTGACCCAACACCTCGTATTCTTGCTAGC
TTTACATGCCTACCTCACTGCAGTTTTTTCCCTGGTGGGTCTGTCCACAT
ATGCTGGAAGAACTCCGTCGAAAAGGGCGCTGCCACTCCAAGCACCGGCT
CGAGCATGTCACCAACGTGCAGGTTCGGATGATGGCGTCCTCACTGCAAT
AATCACCGGAGCTAATAGGGGACTAGGTTTTGCTCTCGCAGAGAGGATGT
CTTTATTGGGGCACAGGGTCGTGCTTACATGCAGGGGAGAGGATGAGGGA
AGAGCTGCGCTGAACCTCCTCCGTGAGCGAAGTCTGGGGGATCGTCTTTC
GTTCTACCCTCTAGATGTAGCTAATGAGAAGAGCGTGCGCGATTTTCGAC
ACGTGTGCGTGGAGGGCTATCTTGGGGGGCGAGTGGACGTCATCTTCAAC
AATGCCGGGGTATGCCTGGAAGGTTGTACAAGTGCAGTATTGTTGACTAC
GCTGGCGGTGAACTTTTATGGGGCGCTTCGGGTGATGGATGCATGCCTTC
CGTCCATGTGCCAGATGGGGAAGGGGTCTGTGGTGTGGGTGACCAGTGGG
GACGGAGAGCTGTGCAACCTTGGCTCGTACCCTAGGAACCTTCTGGAGGG
AGCTAAGTCCCGACAGGTGAGTGTTTCCCCAGCTGTTGATGTGGAGGCGG
CAATAGAGAAAATTATCTCCAGGTATTGCCATGCCAATGATTGCGAGGAA
GAAATTGCCTTCGGGCCTACCCCTGCCTACAGCCTATCCAAGGCTGCCGC
CAATGCTGTGGTTCGCACAGAAGGGGATGCCCTCATGACTACTTCAGGTG
TTCTTCTTGCTGCTGTCTGTCCTGGAGATGTTCTTACACGGATGTGTTCT
GTTCCGTTGGGGGAAGAGAGACAGGGACTACAAAGTCAGGGGGAGTCAGG
GGCTCAGGTGATCAGCCCTGCTGTGGCAGCACAGGCAGTAGTGAAGGTGG
CCTTGCAACAGGATGTCTACCCTGGTGGGCATTTCTATCGGGATGGCATT
AGAATTCCATGGTAG
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