prot_C-tenellus_contig9350.1.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig9350.1.1
Unique Nameprot_C-tenellus_contig9350.1.1
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length88
Homology
[Close]
BLAST of mRNA_C-tenellus_contig9350.1.1 vs. uniprot
Match: D8LLG7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LLG7_ECTSI)

HSP 1 Score: 53.5 bits (127), Expect = 2.730e-6
Identity = 32/67 (47.76%), Postives = 43/67 (64.18%), Query Frame = 0 
Query:    2 NIRNEWLILETYQQLQTEDKQAEEKKKAR-------------EVILRCKEDLDRQIAQNQERAKRER 55
            NIRNEWLILETYQQ+  ++KQAEE ++A+             E + RCK+ LD QI Q   R+++ER
Sbjct:    6 NIRNEWLILETYQQILADEKQAEEDRRAQTVTFTCGRLSRSPEALQRCKQGLDEQIQQKLARSEKER 72
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig9350.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LLG7_ECTSI2.730e-647.76Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 37..57
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 44..88

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig9350contigC-tenellus_contig9350:444..1451 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig9350.1.1mRNA_C-tenellus_contig9350.1.1Choristocarpus tenellus KU2346mRNAC-tenellus_contig9350 444..1460 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig9350.1.1 ID=prot_C-tenellus_contig9350.1.1|Name=mRNA_C-tenellus_contig9350.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=88bp
MNIRNEWLILETYQQLQTEDKQAEEKKKAREVILRCKEDLDRQIAQNQER
AKREREKDAAYDKEQALQHEKYKQEQEEARKVAHQKVL
back to top