mRNA_C-tenellus_contig8292.1.1 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig8292.1.1 vs. uniprot
Match: D7FH25_ECTSI (Multicopper oxidase, type 1 is implicated in celullar iron transport n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH25_ECTSI) HSP 1 Score: 113 bits (282), Expect = 7.760e-27 Identity = 67/113 (59.29%), Postives = 77/113 (68.14%), Query Frame = 1 Query: 130 GGCMLLTLARDGVYL-PSPRRQPS---VLMGPGSRADLAVQCKGPGMFHLASS-GGGD--------MAYLGTRTNLFEGTLAFISVDGSALDMDLPKELPGPLNMGRLLQDLR 429 GGC LLTLARDGVYL P PR Q V++ PGSRADLAV+C G++ LASS GGGD +YLG T++FEGTLAF+ V G ALDMDLP+E P RLLQDLR Sbjct: 114 GGCTLLTLARDGVYLRPVPRLQGGGGHVVIAPGSRADLAVRCDEAGVYRLASSKGGGDDEGEEGSIRSYLGQATDVFEGTLAFVDVGGDALDMDLPEESPAAAGSDRLLQDLR 226
BLAST of mRNA_C-tenellus_contig8292.1.1 vs. uniprot
Match: A0A835ZAK4_9STRA (Cupredoxin n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAK4_9STRA) HSP 1 Score: 96.3 bits (238), Expect = 1.730e-20 Identity = 58/130 (44.62%), Postives = 74/130 (56.92%), Query Frame = 1 Query: 31 NGQFQPVLRIAPGEAVRLRLVHAGVNDHFNITLGGCMLLTLARDGVYLPSPRRQPSVLMGPGSRADLAVQCKGPGMFHLASSGGGDMA------YLGTRTNLFEGTLAFISVDGSALD----MDLPKELP 390 NGQFQP++ + GEAVRLR+VHAG + N C L +ARDG Y PR P VLM PGSRADL + C+ G F L S+ D+ YLG ++ + GTLAF++ G + M LP LP Sbjct: 216 NGQFQPLIEVETGEAVRLRVVHAG--EWTNADSAVCALHVIARDGAYHREPRTLPGVLMSPGSRADLVITCRSSGTFRLHSA---DLPNEDVDRYLGGKSRVRVGTLAFVTARGPRVRREEVMPLPPTLP 340
BLAST of mRNA_C-tenellus_contig8292.1.1 vs. uniprot
Match: A0A3M6VS59_9STRA (Uncharacterized protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VS59_9STRA) HSP 1 Score: 87.4 bits (215), Expect = 2.610e-17 Identity = 47/141 (33.33%), Postives = 76/141 (53.90%), Query Frame = 1 Query: 31 NGQFQPVLRIAPGEAVRLRLVHAGVNDHFNITLGGCMLLTLARDGVYLPSPRRQPSVLMGPGSRADLAVQCKGPGMFHLASSGGGDMA-------------YLGTRTNLFEGTLAFISVDGSALDMDL------PKELPGP 396 NGQ+ P +++ P E V LR++HAG + + GC+++ + DG+YLP PRR +V++ PG+R DL + C+ ++ GG +M ++G ++L+ G LAF+ V G +L L P EL GP Sbjct: 372 NGQYLPKIKVRPHENVLLRMLHAGGTASLEVQVPGCVIILASSDGLYLPKPRRMKTVILSPGARVDLILNCE------PSADGGMEMLRPIQSVKNPELYDFMGNHSDLYSGVLAFVHVQGKSLAEPLITAVPPPSELYGP 506
BLAST of mRNA_C-tenellus_contig8292.1.1 vs. uniprot
Match: H3GQ05_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GQ05_PHYRM) HSP 1 Score: 85.5 bits (210), Expect = 1.230e-16 Identity = 44/129 (34.11%), Postives = 71/129 (55.04%), Query Frame = 1 Query: 31 NGQFQPVLRIAPGEAVRLRLVHAGVNDHFNITLGGCMLLTLARDGVYLPSPRRQPSVLMGPGSRADLAVQCK-----GPGMFHLASSGGGDM--AYLGTRTNLFEGTLAFISVDGSALDMDLPKELPGP 396 NGQ+ P +++ P E V LR++HAG + + GC ++ + DG+YLP PR +V++ PG+R DL + C+ GP + S ++G ++L+ G LAF+ V G +LD L +P P Sbjct: 372 NGQYLPKIQVRPHENVLLRMLHAGGTASLEVQVPGCSVMLASSDGLYLPKPRPMETVVLLPGARVDLVLNCEPTADGGPEVLRPIQSVKDPKLHGFMGNHSDLYSGVLAFVHVQGESLDQPLVTAVPPP 500
BLAST of mRNA_C-tenellus_contig8292.1.1 vs. uniprot
Match: A0A6A3R1L3_9STRA (Uncharacterized protein n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6A3R1L3_9STRA) HSP 1 Score: 85.5 bits (210), Expect = 1.240e-16 Identity = 45/129 (34.88%), Postives = 72/129 (55.81%), Query Frame = 1 Query: 31 NGQFQPVLRIAPGEAVRLRLVHAGVNDHFNITLGGCMLLTLARDGVYLPSPRRQPSVLMGPGSRADLAVQCK-----GPGMFHLASSGGGDM--AYLGTRTNLFEGTLAFISVDGSALDMDLPKELPGP 396 NGQ+ P + + P E V LR++HAG + + GC ++ A DG+YLP+PR +V++ PG+R DL + C+ GP + S +++G ++L+ G LAF+ V G +LD L +P P Sbjct: 383 NGQYLPKIEVRPHENVLLRVLHAGGTASLEVQVPGCSVMLAASDGLYLPNPRPMQTVVLLPGARVDLVLNCEPTAEGGPEVLRPIQSVKDPKLHSFMGNHSDLYSGVLAFVHVQGESLDEPLIAAVPPP 511
BLAST of mRNA_C-tenellus_contig8292.1.1 vs. uniprot
Match: A0A225V8P2_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225V8P2_9STRA) HSP 1 Score: 83.2 bits (204), Expect = 7.880e-16 Identity = 43/132 (32.58%), Postives = 71/132 (53.79%), Query Frame = 1 Query: 31 NGQFQPVLRIAPGEAVRLRLVHAGVNDHFNITLGGCMLLTLARDGVYLPSPRRQPSVLMGPGSRADLAVQCK-----GPGMFHLASSGGGDM--AYLGTRTNLFEGTLAFISVDGSALDMDLPKELPGPLNM 405 NG++ P + + P E V LR++HAG I + GC ++ A DG+Y+P PR +V++ PG+R D+ + C GP + S ++G ++L+ G LAF+ V G +LD L +P P ++ Sbjct: 380 NGEYLPKIAVHPHENVLLRMLHAGGTTSLEIQVPGCSIMLAASDGLYMPKPRPLKTVILSPGARIDIVLNCAPAVHGGPEILRPLQSVKDPKLHGFMGNHSDLYSGVLAFVHVQGGSLDEPLITAVPPPSDL 511
BLAST of mRNA_C-tenellus_contig8292.1.1 vs. uniprot
Match: G4YWY6_PHYSP (Uncharacterized protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4YWY6_PHYSP) HSP 1 Score: 82.4 bits (202), Expect = 1.470e-15 Identity = 43/129 (33.33%), Postives = 69/129 (53.49%), Query Frame = 1 Query: 31 NGQFQPVLRIAPGEAVRLRLVHAGVNDHFNITLGGCMLLTLARDGVYLPSPRRQPSVLMGPGSRADLAVQCK-----GPGMFHLASSGGGDM--AYLGTRTNLFEGTLAFISVDGSALDMDLPKELPGP 396 NGQ+ P + + P E V LR++HAG + + GC ++ A DG+Y P PR +V++ PG+R D+ + C+ GP + S ++G ++L+ G LAF+ V G +LD L +P P Sbjct: 391 NGQYLPKIEVRPHENVLLRVLHAGGTASLEVQVPGCSIMLAASDGLYYPKPRPMETVVLLPGARVDVVLNCEPTAEGGPEILRPIQSVKDPKLHGFMGNHSDLYSGVLAFVHVQGESLDEPLITSVPPP 519
BLAST of mRNA_C-tenellus_contig8292.1.1 vs. uniprot
Match: D0NGN8_PHYIT (Uncharacterized protein n=14 Tax=Phytophthora TaxID=4783 RepID=D0NGN8_PHYIT) HSP 1 Score: 80.9 bits (198), Expect = 5.060e-15 Identity = 42/129 (32.56%), Postives = 70/129 (54.26%), Query Frame = 1 Query: 31 NGQFQPVLRIAPGEAVRLRLVHAGVNDHFNITLGGCMLLTLARDGVYLPSPRRQPSVLMGPGSRADLAVQCK-----GPGMFHLASSGGGDM--AYLGTRTNLFEGTLAFISVDGSALDMDLPKELPGP 396 NG++ P +++ P E V LR++HAG + + GC ++ A DG+Y+ PR +V++ PG+R D+ + C+ GP + S ++G ++L+ G LAFI V G +LD L +P P Sbjct: 379 NGEYLPKIQVRPHENVLLRMLHAGGTASLEVQVPGCSIMLAASDGLYMAKPRPMETVILLPGARVDVVLNCEPATEVGPEILRPIQSVKDPKLHGFMGNHSDLYSGVLAFIHVQGESLDEPLVTAVPPP 507
BLAST of mRNA_C-tenellus_contig8292.1.1 vs. uniprot
Match: A0A0P1ADX2_PLAHL (Multicopper oxidase n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1ADX2_PLAHL) HSP 1 Score: 79.3 bits (194), Expect = 1.750e-14 Identity = 43/128 (33.59%), Postives = 70/128 (54.69%), Query Frame = 1 Query: 31 NGQFQPVLRIAPGEAVRLRLVHAGVNDHFNITLGGCMLLTLARDGVYLPSPRRQPSVLMGPGSRADLAVQCKGPGMFH-----LASSGGGDMAY-LGTRTNLFEGTLAFISVDGSALDMDLPKELPGP 396 NG++ P ++I P E V LR++HAG I + GC ++ A DG+YLP PR + +V++ PG+R DL + C H + S D+ + +G ++ + G LAF+ V G + + L +P P Sbjct: 376 NGEYLPKIQIHPDENVLLRILHAGGIASLEIQIPGCSIILAASDGLYLPKPRVRKTVILSPGARVDLVINCARTEDGHEFLRPIQSVKDPDLHFFMGNHSDFYSGVLAFLYVHGESRNESLVTMVPPP 503
BLAST of mRNA_C-tenellus_contig8292.1.1 vs. uniprot
Match: A0A662WKP9_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WKP9_9STRA) HSP 1 Score: 77.4 bits (189), Expect = 8.250e-14 Identity = 50/137 (36.50%), Postives = 73/137 (53.28%), Query Frame = 1 Query: 31 NGQFQPVLRIAPGEAVRLRLVHAGVNDHFNITLGGCMLLTLARDGVYLPSPRRQPSVLMGPGSRADLAVQCK--GPGMFH----LASSGGGDMA-YLGTRTNLFEGTLAFISVDGSALDMDL------PKELPGPLN 402 NGQ+ P + + P E V LR++HAG +++ GC +L A DG+ L PR +VL+ PG+R DL + C+ G F L S D ++G T+++ G LAFI V G +L+ + P EL GP N Sbjct: 405 NGQYLPKIEVRPHENVLLRMLHAGGTAILEMSVPGCSILLAASDGLNLLKPRPLGTVLLSPGARVDLILNCEPNAEGSFEELRPLQSIKDLDYHNFVGNHTDIYSGVLAFIHVQGESLNQPVITAVPPPSELYGPGN 541 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig8292.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 16
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig8292.1.1 >prot_C-tenellus_contig8292.1.1 ID=prot_C-tenellus_contig8292.1.1|Name=mRNA_C-tenellus_contig8292.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=143bp MCTCSSSPQANGQFQPVLRIAPGEAVRLRLVHAGVNDHFNITLGGCMLLTback to top mRNA from alignment at C-tenellus_contig8292:1075..2078- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig8292.1.1 ID=mRNA_C-tenellus_contig8292.1.1|Name=mRNA_C-tenellus_contig8292.1.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=1004bp|location=Sequence derived from alignment at C-tenellus_contig8292:1075..2078- (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig8292:1075..2078- >mRNA_C-tenellus_contig8292.1.1 ID=mRNA_C-tenellus_contig8292.1.1|Name=mRNA_C-tenellus_contig8292.1.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=429bp|location=Sequence derived from alignment at C-tenellus_contig8292:1075..2078- (Choristocarpus tenellus KU2346)back to top |