mRNA_C-tenellus_contig8235.1.1 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig8235.1.1 vs. uniprot
Match: A0A6H5K307_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K307_9PHAE) HSP 1 Score: 219 bits (559), Expect = 2.650e-61 Identity = 138/388 (35.57%), Postives = 212/388 (54.64%), Query Frame = 1 Query: 31 LGTKMVFTRKVDANGEVERCKARLIIQGFRQRKGEDYFDLFSLTPTHVSLRMLLALKGKMNYVLINSDGKKAFTQADLEETMYVELPEGKAKFGGAVRFLKKCLYGIVQASQNWNFLLVEALLELRLEQSEANPCLFRMIVDGEAVIIIIVHVDDMMVA--EEPVAGYAVCIIEGFNEKFPVVNLGEVTKFMGCRIRRNRKTGTLVVDQSLYIGELVERHGT--GTNYELPSITKRVK---QEGPVPDDYRSMIGGIQWAAIMTRPDTCFAVRELTSSVENPNY-DWDL-LGTKGHRITFGDFGLY---GNGPRDQLIGYTDADYANCKDSRLNISDGVVMFGRGWVDWWSRKQKTVTLSTAEAEYVALCELGEKVMFLKQEYMFMQP 1158 + +K++F KVDA G + KARL+ +G Q++ D+ DL++ T S+RML AL +++ L + D +AF +A L E +++ +PEG G + L K LYG+ QAS+ W LL + LL L EQ A+ CLFR + GE V++++VHVDD+ +E + + E PV +LGE+ + GC +R+ G + + Q Y EL ER+G G LP+ K E V +R+++G + W A++TRPD +VR + P W L G+ + FG+ G LI + ADYA+ R + S GVVM G + W+S+ QK VTLST +AEYVA+ ++G++++FL+Q + FM P Sbjct: 151 IKSKLLFDWKVDAFGFPTKAKARLVARGDMQKEYIDFGDLYAPTVASSSVRMLAALACELDLELCHFDIDQAFVRAPLNENIFMRMPEGCGALSGKIVQLNKSLYGLRQASREWYALLKKCLLALGFEQCMADSCLFRFVEGGEVVLLLVVHVDDIFAVGTKERCDQFG----KDLGEYVPVKSLGELKWYSGCYYEGDREAGRMTISQQTYTEELGERYGVEWGGGIPLPTTWKLWDFDADEPSVEHPFRALVGSLLWIALLTRPDIANSVRAVARYSGAPKLIHWKAALSFLGYAVRTSSFGISFQRGTVSGFSLITFVYADYASRAADRRSESGGVVMCAGGAIAWFSKTQKCVTLSTTQAEYVAMADMGKEILFLRQVWRFMLP 534
BLAST of mRNA_C-tenellus_contig8235.1.1 vs. uniprot
Match: A0A182GC29_AEDAL (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Aedes albopictus TaxID=7160 RepID=A0A182GC29_AEDAL) HSP 1 Score: 204 bits (520), Expect = 8.940e-57 Identity = 135/394 (34.26%), Postives = 213/394 (54.06%), Query Frame = 1 Query: 10 PTDGHKVLGTKMVFTRKVDANGEVERCKARLIIQGFRQRKGEDYFDLFSLTPTHVSLRMLLALKGKMNYVLINSDGKKAFTQADLEETMYVELPEGKAKFG--GAVRFLKKCLYGIVQASQNWNFLLVEALLELRLEQSEANPCLFRMIVDGEAVIIIIVHVDDMMVAEEPVAGYAVCIIEGFNEKFPVVNLGEVTKFMGCRIR-RNRKTGTLVVDQSLYIGELVERHGT--GTNYELPSITKRVKQEGPVP-----DDYRSMIGGIQWAAIMTRPDTCFAVRELTSSVENPNY-DWD--------LLGTKGHRITFGDFGLYGNGPRDQLIGYTDADYANCKDSRLNISDGVVMFGRGWVDWWSRKQKTVTLSTAEAEYVALCELGEKVMFLK 1134 P +G KV+G + V+ K +A GE+ + KARL+ QG+ Q+ G DY ++F+ +H +LR+LLA+ K L + D K A+ DL+E +++ P G A G G V LKK +YG+ Q+++ WN L L+E+ EQS +PCL+ +V G+ V ++ V+VDD+M+ E A + E F V NLGE + F+G +I ++RK V YI + +R G + P E P ++YRS++G + + ++ RPD +V L V +P DW L TK ++++GD G QL+GY+DAD+A +R + + V + G V W SR+Q VTLS+ E+EYVAL E +++++L+ Sbjct: 19 PPEGRKVVGCRWVYKLKRNAAGEITKYKARLVAQGYSQKYGVDYDEVFAPVTSHTTLRVLLAVASKRRMTLKHFDVKTAYLYGDLDEEIFMRQPPGFAVKGREGMVCRLKKSIYGLKQSARCWNQRLHSVLVEMGFEQSATDPCLYTKVVSGKRVYLL-VYVDDIMIDCEDEAQID-SVYEQLKRYFEVTNLGEPSDFLGLKIECKDRKYSVSVGG---YIDRVADRFGLREAKKAKTPMEEGFASSEDKSPKLSDDNEYRSLVGALLYISVCARPDVAASVAILGRKVSSPTEADWVAAKRVVRYLKATKEWKLSYGDAG-------GQLVGYSDADWAGDAGTRKSTTGFVFNYAGGAVSWVSRRQSCVTLSSMESEYVALSEASQELIWLR 400
BLAST of mRNA_C-tenellus_contig8235.1.1 vs. uniprot
Match: A0A6H5JFG2_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFG2_9PHAE) HSP 1 Score: 202 bits (514), Expect = 3.560e-56 Identity = 130/359 (36.21%), Postives = 191/359 (53.20%), Query Frame = 1 Query: 121 QRKGEDYFDLFSLTPTHVSLRMLLALKGKMNYVLINSDGKKAFTQADLEETMYVELPEGKAKFGGAVRFLKKCLYGIVQASQNWNFLLVEALLELRLEQSEANPCLFRMIVDGEAVIIIIVHVDDMMVAEEPVAGYAVCIIEG--FNEKFPVVNLGEVTKFMGCRIRRNRKTGTLVVDQSLYIGELVERHGTGTNYELPSITKRVKQEGPVPDD------YRSMIGGIQWAAIMTRPDTCFAVRELTSSVENP-----NYDWDLLGTKGHRITFGDFGLYGNGPRDQLIGYTDADYANCKDSRLNISDGVVMFGRGWVDWWSRKQKTVTLSTAEAEYVALCELGEKVMFLKQEYMFMQP 1158 QR+ + + TP +ML AL ++N L + D ++AF +++LEE +Y+ LP+G G + L K LYG+ QAS+ W+ +L L+ L EQ A+ C+FR+I DG V+I++VHVDD+ E C G N+ PV NLGE+ + GC RN++TG L + Q + EL +G +P ++ VK D+ +R ++G + W A TRPD AVR + +P N D+LG FG G L GY DAD+A+ R ++S G+V G G V W+SR QK VTLST EAEYVAL ++ ++++FL+Q + FM P Sbjct: 30 QREFYGLLEAGTFTPA----KMLAALACELNLDLCHFDVEQAFVRSELEEDVYMRLPQGCGALSGMIVKLGKSLYGLRQASRQWHAMLKRCLVALGFEQCMADACVFRLIEDGCVVLILVVHVDDIFAVGERER----CDKFGADLNKSVPVKNLGELRWYSGCFYERNKETGRLTISQQTFTDELAAEYGVVGGRSVP-MSSGVKLSDFDADEVATEFPFRELVGSLMWLATQTRPDIANAVRAVARYCASPKLVHWNAAMDILGYARRTSHFGISFQRGTVEGFSLQGYADADFASKAADRRSVSGGIVTCGGGAVSWFSRTQKCVTLSTTEAEYVALGDVVKEILFLRQIWRFMLP 379
BLAST of mRNA_C-tenellus_contig8235.1.1 vs. uniprot
Match: A0A6H5J594_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J594_9PHAE) HSP 1 Score: 209 bits (531), Expect = 1.450e-55 Identity = 132/402 (32.84%), Postives = 212/402 (52.74%), Query Frame = 1 Query: 16 DGHKVLGTKMVFTRKVDANGEVERCKARLIIQGFRQRKGEDYFDLFSLTPTHVSLRMLLALKGKMNYVLINSDGKKAFTQADLEETMYVELPEGKAKFGGAVRFLKKCLYGIVQASQNWNFLLVEALLELRLEQSEANPCLFRMIVDGEAVIIIIVHVDDMMVAEEPVAGYAVCIIEGFNEKFPVVNLGEVTKFMGCRIRRNRKTGTLVVDQSLYIGELVERHGTGTNYELPSI----TKRVKQE---GPVPDDYRSMIGGIQWAAIMTRPDTCFAVRELTSSVENPNY-DWDL-------------LGTKGHRITFGDFGLYGNGPRDQLIGYTDADYANCKDSRLNISDGVVMFGRGWVDWWSRKQKTVTLSTAEAEYVALCELGEKVMFLKQEYMFMQP 1158 +G V+ + VF K D G++ + KARL+ +GF+Q+ G DY + FS T S+R+++AL K N L++ D ++AF Q+ L+ ++++LP G G + L K LYG+ QAS+ + LV LL + EQS ++PC+ R ++ E + II +HVDD++ A A I+E + P NLGEV F+GC R+R+ GT+ + Q YI ++ER +P+ ++ V ++ G VP +R ++G + W A TRP+T AVR + P DW L K + T D G + Y DAD+A+ R ++S +V+ V W+S QK V+LST+EAEY+A+ + ++ +F+ F++P Sbjct: 522 EGCNVIDARWVFKWKADETGKIVKAKARLVAKGFKQKHGVDYLETFSPTANAASIRLVVALACKYNLELLHLDIEQAFVQSKLDHEVFMKLPPGCDSMSGKIVRLNKSLYGLKQASRTFYKRLVSDLLRIGFEQSLSDPCVLRFMMGDEVMGIIAIHVDDILYAGTK--RLAEVIVEALGDSLPTKNLGEVRFFLGCAFSRDREAGTIEISQESYIRSVLERFNICRTSSIPASPANDSRSVMEDEEAGDVP--FREVVGCLMWIANNTRPETSNAVRTVARHSHEPKKSDWKAAQKILSYLKETAHLTLKYKQDTTVDVGT---------LVYVDADFASKATDRRSVSGALVLVAGCLVSWFSWTQKCVSLSTSEAEYIAMGDGVKEALFVNGMLQFLRP 910
BLAST of mRNA_C-tenellus_contig8235.1.1 vs. uniprot
Match: A0A6H5JV80_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV80_9PHAE) HSP 1 Score: 204 bits (519), Expect = 6.360e-55 Identity = 131/402 (32.59%), Postives = 210/402 (52.24%), Query Frame = 1 Query: 16 DGHKVLGTKMVFTRKVDANGEVERCKARLIIQGFRQRKGEDYFDLFSLTPTHVSLRMLLALKGKMNYVLINSDGKKAFTQADLEETMYVELPEGKAKFGGAVRFLKKCLYGIVQASQNWNFLLVEALLELRLEQSEANPCLFRMIVDGEAVIIIIVHVDDMMVAEEPVAGYAVCIIEGFNEKFPVVNLGEVTKFMGCRIRRNRKTGTLVVDQSLYIGELVERHGTGTNYELPSI----TKRVKQE---GPVPDDYRSMIGGIQWAAIMTRPDTCFAVRELTSSVENPNY-DWDL-------------LGTKGHRITFGDFGLYGNGPRDQLIGYTDADYANCKDSRLNISDGVVMFGRGWVDWWSRKQKTVTLSTAEAEYVALCELGEKVMFLKQEYMFMQP 1158 +G V+ + VF K D G++ + KARL+ +GF+Q+ G DY + FS T S+R+++AL K N L++ D ++AF Q+ L+ + ++LP G G + L K LYG+ QAS+ + LV LL + EQS ++PC+ R ++ E + II +HVDD++ A A I+E + P NLGEV F+GC R+R+ GT+ + Q YI ++ER +P+ ++ V ++ G VP +R ++G + W A TRP+T AVR + P DW L K + T D G + Y DAD+A+ R ++S +V+ V W+S QK V+LST+EAEY+A+ + ++ +F+ ++P Sbjct: 253 EGCNVIDARWVFKWKADETGKIVKAKARLVAKGFKQKHGVDYLETFSPTANAASIRLVVALACKYNLELLHLDIEQAFFQSKLDHEVLMKLPPGCDSMSGKIVRLNKSLYGLKQASRTFYKRLVSDLLRIGFEQSLSDPCVLRFMMGDEVMGIIAIHVDDILYAGTK--RLAEVIVEALGDSLPTKNLGEVRFFLGCAFSRDREAGTIEISQESYIRSVLERFNICRTSSIPASPANDSRSVMEDEEAGDVP--FREVVGCLMWIANNTRPETSNAVRTVARHSHEPKKSDWKAAQKILSYLKETAHLTLKYKQDTTVDVGT---------LVYVDADFASKATDRRSVSGALVLVAGCLVSWFSWTQKCVSLSTSEAEYIAMGDGVKEALFVNGMLQLLRP 641
BLAST of mRNA_C-tenellus_contig8235.1.1 vs. uniprot
Match: A0A6H5JWG1_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWG1_9PHAE) HSP 1 Score: 201 bits (511), Expect = 1.010e-54 Identity = 125/381 (32.81%), Postives = 205/381 (53.81%), Query Frame = 1 Query: 64 DANGEVERCKARLIIQGFRQRKGEDYFDLFSLTPTHVSLRMLLALKGKMNYVLINSDGKKAFTQADLEETMYVELPEGKAKFGGAVRFLKKCLYGIVQASQNWNFLLVEALLELRLEQSEANPCLFRMIVDGEAVIIIIVHVDDMMVAEEPVAGYAVCIIEG--FNEKFPVVNLGEVTKFMGCRIRRNRKTGTLVVDQSLYIGELVERHGTGTNYELPSITK-RVKQ----EGPVPDDYRSMIGGIQWAAIMTRPDTCFAVRELTSSVENPN-YDWD--------LLGTKGHRITFGDFGLYGNGPRDQLIGYTDADYANCKDSRLNISDGVVMFGRGWVDWWSRKQKTVTLSTAEAEYVALCELGEKVMFLKQEYMFMQP 1158 D G R KARL+ +GF QR+G D+F+ FS P+ S+R+L A+ +++ L + D ++AF Q++L+E +++ LP G G V L++ LYG+ QAS+ W+ L+ + L E A+ C+ R+I G +++++HVDD+ + + C G N P+ NLGE+ + GCR R+ GT+ + Q ++V + G T+ E P + +++Q E V + +RS++G + W A TRPD AVR + P W+ + T G+ ITF G G D + + D+D+AN R ++S +VMF V + R QK+VTLS+ EAEYVA+ + ++ +FL+ + F+ P Sbjct: 121 DEFGYAVRAKARLVARGFAQREGVDFFETFSPYPSITSIRLLAAIACVLDWDLCHFDAEQAFVQSELDEVVFIRLPPGCGALSGKVVRLRRSLYGLKQASRTWHHHLMRGMKSLGFEPCAADACVMRLIESGVVTMVVVIHVDDIF----SIGLKSRCDQFGVDLNRYVPISNLGELRWYAGCRFSRDTVLGTVTISQQAVAEKIVAKFGVTTDKETPMVVGLKLEQYDADEPDVDEPFRSLVGHLMWLANQTRPDILNAVRAVARYSHAPKRLHWEAALHVLMYVRFTSGYGITF-QRGTVGG---DHMELFVDSDFANKATDRRSVSGALVMFAGACVMYLCRTQKSVTLSSTEAEYVAMSDGMKEAIFLRYLWKFIFP 493
BLAST of mRNA_C-tenellus_contig8235.1.1 vs. uniprot
Match: A0A6H5JLN0_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLN0_9PHAE) HSP 1 Score: 196 bits (499), Expect = 3.140e-54 Identity = 127/359 (35.38%), Postives = 190/359 (52.92%), Query Frame = 1 Query: 121 QRKGEDYFDLFSLTPTHVSLRMLLALKGKMNYVLINSDGKKAFTQADLEETMYVELPEGKAKFGGAVRFLKKCLYGIVQASQNWNFLLVEALLELRLEQSEANPCLFRMIVDGEAVIIIIVHVDDMM-VAEEPVAGYAVCIIEGFNEKFPVVNLGEVTKFMGCRIRRNRKTGTLVVDQSLYIGELVERHGTGTNYELP-----SITKRVKQEGPVPDDYRSMIGGIQWAAIMTRPDTCFAVRELTSSVENPN-YDWDL-LGTKGHRITFGDFGLYGNGPRDQLIG-----YTDADYANCKDSRLNISDGVVMFGRGWVDWWSRKQKTVTLSTAEAEYVALCELGEKVMFLKQEYMFMQP 1158 QR D + ++ T S+R+L A+ + N L + D K+AF Q+DL+E +++ LPEG + G + L K LYG+ QAS+ W+ L L+ L Q A+ C+FR+I +G V+ ++VHVDD+ + EE N PV NLG++ + GC R+ GTL + Q Y EL G E+P +++ + E V +R +IG + W A TRPD AVR + +P W LG G+ + D G+ R + G + DADYA+ R ++S G+VM G G + W+SR QK VTLST EAEYV+L ++ ++V+FL+Q + FM P Sbjct: 2 QRVHVDCGETYAPTVAVSSVRLLAAMACEQNLSLRHFDIKQAFVQSDLDEDVFMRLPEGCGRLSGMIVKLNKSLYGLKQASRQWHSHLARCLICLGFIQCMADTCVFRLIEEGRVVVTLVVHVDDIFSIGEEERCDQ---FGRDLNTMVPVKNLGDLRWYSGCFYERDWDAGTLKISQQTYAEELGMEFGVEYGKEIPLPVGLKLSEFDQDEEVVSWPFRELIGSLMWLATQTRPDIANAVRAVARYCASPKEIHWRAGLGILGYVVRTSDLGITFR--RGSVAGLSMEVFVDADYASKAADRRSVSGGLVMCGGGCISWFSRTQKCVTLSTTEAEYVSLADVMKEVLFLRQVWRFMLP 355
BLAST of mRNA_C-tenellus_contig8235.1.1 vs. uniprot
Match: A0A6H5KN43_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KN43_9PHAE) HSP 1 Score: 201 bits (511), Expect = 4.270e-54 Identity = 126/381 (33.07%), Postives = 202/381 (53.02%), Query Frame = 1 Query: 58 KVDANGEVERCKARLIIQGFRQRKGEDYFDLFSLTPTHVSLRMLLALKGKMNYVLINSDGKKAFTQADLEETMYVELPEGKAKFGGAVRFLKKCLYGIVQASQNWNFLLVEALLELRLEQSEANPCLFRMIVDGEAVIIIIVHVDDMMVAEEPVAGYAVCIIEGFNEKFPVVNLGEVTKFMGCRIRRNRKTGTLVVDQSLYIGELVERHGTGTNYELP-SITKR----VKQEGPVPDDYRSMIGGIQWAAIMTRPDTCFAVRELTSSVENPNYDWDLLGTKGHRITFGDFGLYGNGPRDQLIG-----YTDADYANCKDSRLNISDGVVMFGRGWVDWWSRKQKTVTLSTAEAEYVALCELGEKVMFLKQEYMFMQPL*RI 1170 +V + G++ + KARL+ +GF+Q+ G DY + FS T S+R+L+AL K + ++ D ++AF Q++L+ ++++LP G G V L K LYG+ QAS+ ++ LV L + EQS ++PC+ ++ E + +I +HVDD++ A + A ++E + P NLGEV F+GC R+R+ GT+ + Q YI ++ER +P S+T ++ EG +R ++G + W A TRPD AVR + PN K L +D ++ Y DAD+A+ R + S +V+ V W SR QK VTLST EAEYVA+ + ++ +F+K F++P RI Sbjct: 203 RVSSKGKIVKAKARLVAKGFKQKHGVDYLETFSPTANAASIRLLVALACKYDLEFLHFDIEQAFVQSELDHEVFMKLPPGCESMTGKVVRLDKSLYGLRQASRTFHKRLVSDLKRIGFEQSLSDPCVLHFMMGDEVLGMIAIHVDDILYAG--IERLAEMVVEALGDSLPTKNLGEVRFFLGCAFARDREAGTIEMSQESYIRSVLERFNVCRTSSIPASLTNDYRSVIEDEGAGDVPFRDVVGSLMWIANQTRPDISNAVRAVARHSHEPNKSHWKAAQKILNYLLETAHLTLKYKQDTMVDVGTLVYVDADFASEATDRRSDSGALVLVADCLVAWISRTQKCVTLSTTEAEYVAMGDGVKEALFVKGMLEFLRPSDRI 581
BLAST of mRNA_C-tenellus_contig8235.1.1 vs. uniprot
Match: A0A182GIT5_AEDAL (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Aedes albopictus TaxID=7160 RepID=A0A182GIT5_AEDAL) HSP 1 Score: 197 bits (501), Expect = 8.470e-54 Identity = 131/388 (33.76%), Postives = 217/388 (55.93%), Query Frame = 1 Query: 19 GHKVLGTKMVFTRKVDANGEVERCKARLIIQGFRQRKGEDYFDLFSLTPTHVSLRMLLALKGKMNYVLINSDGKKAFTQADLEETMYVELPEG-KAKFGGAVRFLKKCLYGIVQASQNWNFLLVEALLELRLEQSEANPCLFRMIVDGEAVIIIIVHVDDMMVAEEPVAGYAVCIIEGFNEKFPVVNLGEVTKFMGCRIRRNRKTGTLVVDQSLYIGELVERHGTG----TNYEL-PSITKRVKQEGPVPDD--YRSMIGGIQWAAIMTRPDTCFAVRELTSSVENPNY-DWD--------LLGTKGHRITFGDFGLYGNGPRDQLIGYTDADYANCKDSRLNISDGVVMFGRGWVDWWSRKQKTVTLSTAEAEYVALCELGEKVMFL 1131 G K +G K +F RK+D +G V R KARL+ QGF Q+ G DY ++F+ V+ R+LL + + V+ ++D K A+ +LEE++++ P G + + AV L+K LYG+ QA WN + L ++ +QS+ +PCL+ + +G+ ++++VDDM++A Y II+ N F V +LG+++ F+G +I RN K +L Q YI +++E+ G + Y L P ++ +++ +P++ Y S+IG + + A+ TRPD +V L SV P DW+ L T H + + G G R+ + Y DAD+AN SR + S + +FG G + W SRKQ V LS+ EAE+VAL ++++++ Sbjct: 34 GRKAVGCKWIFKRKLDEDGNVVRYKARLVAQGFTQKFGTDYDEVFAPVVRQVTFRVLLTVASQRGMVVKHADVKTAYLNGELEESIFMRQPPGYEDENRDAVCSLQKSLYGLKQAGYVWNKKFDQVLKRMKFQQSKNDPCLY-VRRNGKGYTYLVIYVDDMVIACNDDEEYEE-IIKTLNRHFKVTSLGDISHFLGIKINRNEKGFSL--SQQTYIKQILEQFGMNQAKPSKYPLDPGHIQQKEEQVMLPNNHQYASLIGSLLYVAVNTRPDIAVSVSILGRSVSAPTQADWNEAKRILRYLKLTMDHEL------VLGQGERNLEV-YVDADWANDVKSRKSNSGYLFLFGGGPICWGSRKQTCVALSSTEAEFVALAASCQELLWI 410
BLAST of mRNA_C-tenellus_contig8235.1.1 vs. uniprot
Match: A0A4Y2K0U2_ARAVE (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=8 Tax=Araneus ventricosus TaxID=182803 RepID=A0A4Y2K0U2_ARAVE) HSP 1 Score: 199 bits (506), Expect = 1.180e-53 Identity = 131/390 (33.59%), Postives = 207/390 (53.08%), Query Frame = 1 Query: 10 PTDGHKVLGTKMVFTRKVDANGEVERCKARLIIQGFRQRKGEDYFDLFSLTPTHVSLRMLLALKGKMNYVLINSDGKKAFTQADLEETMYVELPEGKAKFGGAVRFLK--KCLYGIVQASQNWNFLLVEALLELRLEQSEANPCLFRMIVDGEAVIIIIVHVDDMMVA--EEPVAGYAVCIIEGFNEKFPVVNLGEVTKFMGCRIRRNRKTGTLVVDQSLYIGELVER----HGTGTNYELPSITKRVKQEG-----PVPDDYRSMIGGIQWAAIMTRPDTCFAVRELTSSVENPNY-DWDLLGTKGHRI-TFGDFGLYGNGPRDQLI-GYTDADYANCKDSRLNISDGVVMFGRGWVDWWSRKQKTVTLSTAEAEYVALCELGEKVMFL 1131 P G KV+G + F K D+ G +ER KARL+ QGF Q+ G DY + F+ T+ ++R LA N + + D K AF +LE+ +Y+ PEG + G + K K +YG+ QA++ W+ + E+L++ EQS+A+PCLF+ + +G + II V+VDD+++A EE + II+ E++ + NLGEV ++G I R K G ++Q I E+VE+ TN +P +KQEG P YR +G + + A ++RPD AV L+ E P DW+ + + T + L N ++ ++ + D D+AN K R + S V G + W S++Q V LS+ EAEYV+ + V++L Sbjct: 144 PPSGKKVIGCRWTFKAKYDSKGNIERYKARLVAQGFSQKFGTDYDETFAPVVTYTTIRTFLAAAAHKNLNVTHVDIKTAFLHGNLEDEVYMSQPEGYIETGQEQKVCKLNKAIYGLKQAARAWHLKIGESLIKYGFEQSKADPCLFKFVNNGNPMYII-VYVDDLLIAGKEEDIRK----IIKELEEEYELKNLGEVNYYLGINIERT-KEGNFALNQKNKIEEIVEKFNLKEAKPTN--IPMDPNYLKQEGEDDILPNNTQYRKAVGALLYIATVSRPDIAVAVNILSRRNEKPRERDWNAVKRIIRYLKTTAELKLIINMDKEPILTAFCDTDWANDKSDRKSTSGSVFKLGNCTIQWMSKRQNCVALSSTEAEYVSAANTAQVVVWL 525 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig8235.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig8235.1.1 >prot_C-tenellus_contig8235.1.1 ID=prot_C-tenellus_contig8235.1.1|Name=mRNA_C-tenellus_contig8235.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=374bp MVFTRKVDANGEVERCKARLIIQGFRQRKGEDYFDLFSLTPTHVSLRMLLback to top mRNA from alignment at C-tenellus_contig8235:258..1665- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig8235.1.1 ID=mRNA_C-tenellus_contig8235.1.1|Name=mRNA_C-tenellus_contig8235.1.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=1408bp|location=Sequence derived from alignment at C-tenellus_contig8235:258..1665- (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig8235:258..1665- >mRNA_C-tenellus_contig8235.1.1 ID=mRNA_C-tenellus_contig8235.1.1|Name=mRNA_C-tenellus_contig8235.1.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=1122bp|location=Sequence derived from alignment at C-tenellus_contig8235:258..1665- (Choristocarpus tenellus KU2346)back to top |