mRNA_C-tenellus_contig8235.1.1 (mRNA) Choristocarpus tenellus KU2346

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-tenellus_contig8235.1.1
Unique NamemRNA_C-tenellus_contig8235.1.1
TypemRNA
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Homology
BLAST of mRNA_C-tenellus_contig8235.1.1 vs. uniprot
Match: A0A6H5K307_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K307_9PHAE)

HSP 1 Score: 219 bits (559), Expect = 2.650e-61
Identity = 138/388 (35.57%), Postives = 212/388 (54.64%), Query Frame = 1
Query:   31 LGTKMVFTRKVDANGEVERCKARLIIQGFRQRKGEDYFDLFSLTPTHVSLRMLLALKGKMNYVLINSDGKKAFTQADLEETMYVELPEGKAKFGGAVRFLKKCLYGIVQASQNWNFLLVEALLELRLEQSEANPCLFRMIVDGEAVIIIIVHVDDMMVA--EEPVAGYAVCIIEGFNEKFPVVNLGEVTKFMGCRIRRNRKTGTLVVDQSLYIGELVERHGT--GTNYELPSITKRVK---QEGPVPDDYRSMIGGIQWAAIMTRPDTCFAVRELTSSVENPNY-DWDL-LGTKGHRITFGDFGLY---GNGPRDQLIGYTDADYANCKDSRLNISDGVVMFGRGWVDWWSRKQKTVTLSTAEAEYVALCELGEKVMFLKQEYMFMQP 1158
            + +K++F  KVDA G   + KARL+ +G  Q++  D+ DL++ T    S+RML AL  +++  L + D  +AF +A L E +++ +PEG     G +  L K LYG+ QAS+ W  LL + LL L  EQ  A+ CLFR +  GE V++++VHVDD+     +E    +     +   E  PV +LGE+  + GC    +R+ G + + Q  Y  EL ER+G   G    LP+  K       E  V   +R+++G + W A++TRPD   +VR +      P    W   L   G+ +    FG+    G      LI +  ADYA+    R + S GVVM   G + W+S+ QK VTLST +AEYVA+ ++G++++FL+Q + FM P
Sbjct:  151 IKSKLLFDWKVDAFGFPTKAKARLVARGDMQKEYIDFGDLYAPTVASSSVRMLAALACELDLELCHFDIDQAFVRAPLNENIFMRMPEGCGALSGKIVQLNKSLYGLRQASREWYALLKKCLLALGFEQCMADSCLFRFVEGGEVVLLLVVHVDDIFAVGTKERCDQFG----KDLGEYVPVKSLGELKWYSGCYYEGDREAGRMTISQQTYTEELGERYGVEWGGGIPLPTTWKLWDFDADEPSVEHPFRALVGSLLWIALLTRPDIANSVRAVARYSGAPKLIHWKAALSFLGYAVRTSSFGISFQRGTVSGFSLITFVYADYASRAADRRSESGGVVMCAGGAIAWFSKTQKCVTLSTTQAEYVAMADMGKEILFLRQVWRFMLP 534          
BLAST of mRNA_C-tenellus_contig8235.1.1 vs. uniprot
Match: A0A182GC29_AEDAL (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Aedes albopictus TaxID=7160 RepID=A0A182GC29_AEDAL)

HSP 1 Score: 204 bits (520), Expect = 8.940e-57
Identity = 135/394 (34.26%), Postives = 213/394 (54.06%), Query Frame = 1
Query:   10 PTDGHKVLGTKMVFTRKVDANGEVERCKARLIIQGFRQRKGEDYFDLFSLTPTHVSLRMLLALKGKMNYVLINSDGKKAFTQADLEETMYVELPEGKAKFG--GAVRFLKKCLYGIVQASQNWNFLLVEALLELRLEQSEANPCLFRMIVDGEAVIIIIVHVDDMMVAEEPVAGYAVCIIEGFNEKFPVVNLGEVTKFMGCRIR-RNRKTGTLVVDQSLYIGELVERHGT--GTNYELPSITKRVKQEGPVP-----DDYRSMIGGIQWAAIMTRPDTCFAVRELTSSVENPNY-DWD--------LLGTKGHRITFGDFGLYGNGPRDQLIGYTDADYANCKDSRLNISDGVVMFGRGWVDWWSRKQKTVTLSTAEAEYVALCELGEKVMFLK 1134
            P +G KV+G + V+  K +A GE+ + KARL+ QG+ Q+ G DY ++F+   +H +LR+LLA+  K    L + D K A+   DL+E +++  P G A  G  G V  LKK +YG+ Q+++ WN  L   L+E+  EQS  +PCL+  +V G+ V ++ V+VDD+M+  E  A     + E     F V NLGE + F+G +I  ++RK    V     YI  + +R G       + P        E   P     ++YRS++G + + ++  RPD   +V  L   V +P   DW         L  TK  ++++GD G        QL+GY+DAD+A    +R + +  V  +  G V W SR+Q  VTLS+ E+EYVAL E  +++++L+
Sbjct:   19 PPEGRKVVGCRWVYKLKRNAAGEITKYKARLVAQGYSQKYGVDYDEVFAPVTSHTTLRVLLAVASKRRMTLKHFDVKTAYLYGDLDEEIFMRQPPGFAVKGREGMVCRLKKSIYGLKQSARCWNQRLHSVLVEMGFEQSATDPCLYTKVVSGKRVYLL-VYVDDIMIDCEDEAQID-SVYEQLKRYFEVTNLGEPSDFLGLKIECKDRKYSVSVGG---YIDRVADRFGLREAKKAKTPMEEGFASSEDKSPKLSDDNEYRSLVGALLYISVCARPDVAASVAILGRKVSSPTEADWVAAKRVVRYLKATKEWKLSYGDAG-------GQLVGYSDADWAGDAGTRKSTTGFVFNYAGGAVSWVSRRQSCVTLSSMESEYVALSEASQELIWLR 400          
BLAST of mRNA_C-tenellus_contig8235.1.1 vs. uniprot
Match: A0A6H5JFG2_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFG2_9PHAE)

HSP 1 Score: 202 bits (514), Expect = 3.560e-56
Identity = 130/359 (36.21%), Postives = 191/359 (53.20%), Query Frame = 1
Query:  121 QRKGEDYFDLFSLTPTHVSLRMLLALKGKMNYVLINSDGKKAFTQADLEETMYVELPEGKAKFGGAVRFLKKCLYGIVQASQNWNFLLVEALLELRLEQSEANPCLFRMIVDGEAVIIIIVHVDDMMVAEEPVAGYAVCIIEG--FNEKFPVVNLGEVTKFMGCRIRRNRKTGTLVVDQSLYIGELVERHGTGTNYELPSITKRVKQEGPVPDD------YRSMIGGIQWAAIMTRPDTCFAVRELTSSVENP-----NYDWDLLGTKGHRITFGDFGLYGNGPRDQLIGYTDADYANCKDSRLNISDGVVMFGRGWVDWWSRKQKTVTLSTAEAEYVALCELGEKVMFLKQEYMFMQP 1158
            QR+     +  + TP     +ML AL  ++N  L + D ++AF +++LEE +Y+ LP+G     G +  L K LYG+ QAS+ W+ +L   L+ L  EQ  A+ C+FR+I DG  V+I++VHVDD+    E       C   G   N+  PV NLGE+  + GC   RN++TG L + Q  +  EL   +G      +P ++  VK      D+      +R ++G + W A  TRPD   AVR +     +P     N   D+LG       FG     G      L GY DAD+A+    R ++S G+V  G G V W+SR QK VTLST EAEYVAL ++ ++++FL+Q + FM P
Sbjct:   30 QREFYGLLEAGTFTPA----KMLAALACELNLDLCHFDVEQAFVRSELEEDVYMRLPQGCGALSGMIVKLGKSLYGLRQASRQWHAMLKRCLVALGFEQCMADACVFRLIEDGCVVLILVVHVDDIFAVGERER----CDKFGADLNKSVPVKNLGELRWYSGCFYERNKETGRLTISQQTFTDELAAEYGVVGGRSVP-MSSGVKLSDFDADEVATEFPFRELVGSLMWLATQTRPDIANAVRAVARYCASPKLVHWNAAMDILGYARRTSHFGISFQRGTVEGFSLQGYADADFASKAADRRSVSGGIVTCGGGAVSWFSRTQKCVTLSTTEAEYVALGDVVKEILFLRQIWRFMLP 379          
BLAST of mRNA_C-tenellus_contig8235.1.1 vs. uniprot
Match: A0A6H5J594_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J594_9PHAE)

HSP 1 Score: 209 bits (531), Expect = 1.450e-55
Identity = 132/402 (32.84%), Postives = 212/402 (52.74%), Query Frame = 1
Query:   16 DGHKVLGTKMVFTRKVDANGEVERCKARLIIQGFRQRKGEDYFDLFSLTPTHVSLRMLLALKGKMNYVLINSDGKKAFTQADLEETMYVELPEGKAKFGGAVRFLKKCLYGIVQASQNWNFLLVEALLELRLEQSEANPCLFRMIVDGEAVIIIIVHVDDMMVAEEPVAGYAVCIIEGFNEKFPVVNLGEVTKFMGCRIRRNRKTGTLVVDQSLYIGELVERHGTGTNYELPSI----TKRVKQE---GPVPDDYRSMIGGIQWAAIMTRPDTCFAVRELTSSVENPNY-DWDL-------------LGTKGHRITFGDFGLYGNGPRDQLIGYTDADYANCKDSRLNISDGVVMFGRGWVDWWSRKQKTVTLSTAEAEYVALCELGEKVMFLKQEYMFMQP 1158
            +G  V+  + VF  K D  G++ + KARL+ +GF+Q+ G DY + FS T    S+R+++AL  K N  L++ D ++AF Q+ L+  ++++LP G     G +  L K LYG+ QAS+ +   LV  LL +  EQS ++PC+ R ++  E + II +HVDD++ A       A  I+E   +  P  NLGEV  F+GC   R+R+ GT+ + Q  YI  ++ER        +P+     ++ V ++   G VP  +R ++G + W A  TRP+T  AVR +      P   DW               L  K  + T  D G          + Y DAD+A+    R ++S  +V+     V W+S  QK V+LST+EAEY+A+ +  ++ +F+     F++P
Sbjct:  522 EGCNVIDARWVFKWKADETGKIVKAKARLVAKGFKQKHGVDYLETFSPTANAASIRLVVALACKYNLELLHLDIEQAFVQSKLDHEVFMKLPPGCDSMSGKIVRLNKSLYGLKQASRTFYKRLVSDLLRIGFEQSLSDPCVLRFMMGDEVMGIIAIHVDDILYAGTK--RLAEVIVEALGDSLPTKNLGEVRFFLGCAFSRDREAGTIEISQESYIRSVLERFNICRTSSIPASPANDSRSVMEDEEAGDVP--FREVVGCLMWIANNTRPETSNAVRTVARHSHEPKKSDWKAAQKILSYLKETAHLTLKYKQDTTVDVGT---------LVYVDADFASKATDRRSVSGALVLVAGCLVSWFSWTQKCVSLSTSEAEYIAMGDGVKEALFVNGMLQFLRP 910          
BLAST of mRNA_C-tenellus_contig8235.1.1 vs. uniprot
Match: A0A6H5JV80_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV80_9PHAE)

HSP 1 Score: 204 bits (519), Expect = 6.360e-55
Identity = 131/402 (32.59%), Postives = 210/402 (52.24%), Query Frame = 1
Query:   16 DGHKVLGTKMVFTRKVDANGEVERCKARLIIQGFRQRKGEDYFDLFSLTPTHVSLRMLLALKGKMNYVLINSDGKKAFTQADLEETMYVELPEGKAKFGGAVRFLKKCLYGIVQASQNWNFLLVEALLELRLEQSEANPCLFRMIVDGEAVIIIIVHVDDMMVAEEPVAGYAVCIIEGFNEKFPVVNLGEVTKFMGCRIRRNRKTGTLVVDQSLYIGELVERHGTGTNYELPSI----TKRVKQE---GPVPDDYRSMIGGIQWAAIMTRPDTCFAVRELTSSVENPNY-DWDL-------------LGTKGHRITFGDFGLYGNGPRDQLIGYTDADYANCKDSRLNISDGVVMFGRGWVDWWSRKQKTVTLSTAEAEYVALCELGEKVMFLKQEYMFMQP 1158
            +G  V+  + VF  K D  G++ + KARL+ +GF+Q+ G DY + FS T    S+R+++AL  K N  L++ D ++AF Q+ L+  + ++LP G     G +  L K LYG+ QAS+ +   LV  LL +  EQS ++PC+ R ++  E + II +HVDD++ A       A  I+E   +  P  NLGEV  F+GC   R+R+ GT+ + Q  YI  ++ER        +P+     ++ V ++   G VP  +R ++G + W A  TRP+T  AVR +      P   DW               L  K  + T  D G          + Y DAD+A+    R ++S  +V+     V W+S  QK V+LST+EAEY+A+ +  ++ +F+      ++P
Sbjct:  253 EGCNVIDARWVFKWKADETGKIVKAKARLVAKGFKQKHGVDYLETFSPTANAASIRLVVALACKYNLELLHLDIEQAFFQSKLDHEVLMKLPPGCDSMSGKIVRLNKSLYGLKQASRTFYKRLVSDLLRIGFEQSLSDPCVLRFMMGDEVMGIIAIHVDDILYAGTK--RLAEVIVEALGDSLPTKNLGEVRFFLGCAFSRDREAGTIEISQESYIRSVLERFNICRTSSIPASPANDSRSVMEDEEAGDVP--FREVVGCLMWIANNTRPETSNAVRTVARHSHEPKKSDWKAAQKILSYLKETAHLTLKYKQDTTVDVGT---------LVYVDADFASKATDRRSVSGALVLVAGCLVSWFSWTQKCVSLSTSEAEYIAMGDGVKEALFVNGMLQLLRP 641          
BLAST of mRNA_C-tenellus_contig8235.1.1 vs. uniprot
Match: A0A6H5JWG1_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWG1_9PHAE)

HSP 1 Score: 201 bits (511), Expect = 1.010e-54
Identity = 125/381 (32.81%), Postives = 205/381 (53.81%), Query Frame = 1
Query:   64 DANGEVERCKARLIIQGFRQRKGEDYFDLFSLTPTHVSLRMLLALKGKMNYVLINSDGKKAFTQADLEETMYVELPEGKAKFGGAVRFLKKCLYGIVQASQNWNFLLVEALLELRLEQSEANPCLFRMIVDGEAVIIIIVHVDDMMVAEEPVAGYAVCIIEG--FNEKFPVVNLGEVTKFMGCRIRRNRKTGTLVVDQSLYIGELVERHGTGTNYELPSITK-RVKQ----EGPVPDDYRSMIGGIQWAAIMTRPDTCFAVRELTSSVENPN-YDWD--------LLGTKGHRITFGDFGLYGNGPRDQLIGYTDADYANCKDSRLNISDGVVMFGRGWVDWWSRKQKTVTLSTAEAEYVALCELGEKVMFLKQEYMFMQP 1158
            D  G   R KARL+ +GF QR+G D+F+ FS  P+  S+R+L A+   +++ L + D ++AF Q++L+E +++ LP G     G V  L++ LYG+ QAS+ W+  L+  +  L  E   A+ C+ R+I  G   +++++HVDD+      +   + C   G   N   P+ NLGE+  + GCR  R+   GT+ + Q     ++V + G  T+ E P +   +++Q    E  V + +RS++G + W A  TRPD   AVR +      P    W+        +  T G+ ITF   G  G    D +  + D+D+AN    R ++S  +VMF    V +  R QK+VTLS+ EAEYVA+ +  ++ +FL+  + F+ P
Sbjct:  121 DEFGYAVRAKARLVARGFAQREGVDFFETFSPYPSITSIRLLAAIACVLDWDLCHFDAEQAFVQSELDEVVFIRLPPGCGALSGKVVRLRRSLYGLKQASRTWHHHLMRGMKSLGFEPCAADACVMRLIESGVVTMVVVIHVDDIF----SIGLKSRCDQFGVDLNRYVPISNLGELRWYAGCRFSRDTVLGTVTISQQAVAEKIVAKFGVTTDKETPMVVGLKLEQYDADEPDVDEPFRSLVGHLMWLANQTRPDILNAVRAVARYSHAPKRLHWEAALHVLMYVRFTSGYGITF-QRGTVGG---DHMELFVDSDFANKATDRRSVSGALVMFAGACVMYLCRTQKSVTLSSTEAEYVAMSDGMKEAIFLRYLWKFIFP 493          
BLAST of mRNA_C-tenellus_contig8235.1.1 vs. uniprot
Match: A0A6H5JLN0_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLN0_9PHAE)

HSP 1 Score: 196 bits (499), Expect = 3.140e-54
Identity = 127/359 (35.38%), Postives = 190/359 (52.92%), Query Frame = 1
Query:  121 QRKGEDYFDLFSLTPTHVSLRMLLALKGKMNYVLINSDGKKAFTQADLEETMYVELPEGKAKFGGAVRFLKKCLYGIVQASQNWNFLLVEALLELRLEQSEANPCLFRMIVDGEAVIIIIVHVDDMM-VAEEPVAGYAVCIIEGFNEKFPVVNLGEVTKFMGCRIRRNRKTGTLVVDQSLYIGELVERHGTGTNYELP-----SITKRVKQEGPVPDDYRSMIGGIQWAAIMTRPDTCFAVRELTSSVENPN-YDWDL-LGTKGHRITFGDFGLYGNGPRDQLIG-----YTDADYANCKDSRLNISDGVVMFGRGWVDWWSRKQKTVTLSTAEAEYVALCELGEKVMFLKQEYMFMQP 1158
            QR   D  + ++ T    S+R+L A+  + N  L + D K+AF Q+DL+E +++ LPEG  +  G +  L K LYG+ QAS+ W+  L   L+ L   Q  A+ C+FR+I +G  V+ ++VHVDD+  + EE             N   PV NLG++  + GC   R+   GTL + Q  Y  EL    G     E+P      +++  + E  V   +R +IG + W A  TRPD   AVR +     +P    W   LG  G+ +   D G+     R  + G     + DADYA+    R ++S G+VM G G + W+SR QK VTLST EAEYV+L ++ ++V+FL+Q + FM P
Sbjct:    2 QRVHVDCGETYAPTVAVSSVRLLAAMACEQNLSLRHFDIKQAFVQSDLDEDVFMRLPEGCGRLSGMIVKLNKSLYGLKQASRQWHSHLARCLICLGFIQCMADTCVFRLIEEGRVVVTLVVHVDDIFSIGEEERCDQ---FGRDLNTMVPVKNLGDLRWYSGCFYERDWDAGTLKISQQTYAEELGMEFGVEYGKEIPLPVGLKLSEFDQDEEVVSWPFRELIGSLMWLATQTRPDIANAVRAVARYCASPKEIHWRAGLGILGYVVRTSDLGITFR--RGSVAGLSMEVFVDADYASKAADRRSVSGGLVMCGGGCISWFSRTQKCVTLSTTEAEYVSLADVMKEVLFLRQVWRFMLP 355          
BLAST of mRNA_C-tenellus_contig8235.1.1 vs. uniprot
Match: A0A6H5KN43_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KN43_9PHAE)

HSP 1 Score: 201 bits (511), Expect = 4.270e-54
Identity = 126/381 (33.07%), Postives = 202/381 (53.02%), Query Frame = 1
Query:   58 KVDANGEVERCKARLIIQGFRQRKGEDYFDLFSLTPTHVSLRMLLALKGKMNYVLINSDGKKAFTQADLEETMYVELPEGKAKFGGAVRFLKKCLYGIVQASQNWNFLLVEALLELRLEQSEANPCLFRMIVDGEAVIIIIVHVDDMMVAEEPVAGYAVCIIEGFNEKFPVVNLGEVTKFMGCRIRRNRKTGTLVVDQSLYIGELVERHGTGTNYELP-SITKR----VKQEGPVPDDYRSMIGGIQWAAIMTRPDTCFAVRELTSSVENPNYDWDLLGTKGHRITFGDFGLYGNGPRDQLIG-----YTDADYANCKDSRLNISDGVVMFGRGWVDWWSRKQKTVTLSTAEAEYVALCELGEKVMFLKQEYMFMQPL*RI 1170
            +V + G++ + KARL+ +GF+Q+ G DY + FS T    S+R+L+AL  K +   ++ D ++AF Q++L+  ++++LP G     G V  L K LYG+ QAS+ ++  LV  L  +  EQS ++PC+   ++  E + +I +HVDD++ A   +   A  ++E   +  P  NLGEV  F+GC   R+R+ GT+ + Q  YI  ++ER        +P S+T      ++ EG     +R ++G + W A  TRPD   AVR +      PN        K          L     +D ++      Y DAD+A+    R + S  +V+     V W SR QK VTLST EAEYVA+ +  ++ +F+K    F++P  RI
Sbjct:  203 RVSSKGKIVKAKARLVAKGFKQKHGVDYLETFSPTANAASIRLLVALACKYDLEFLHFDIEQAFVQSELDHEVFMKLPPGCESMTGKVVRLDKSLYGLRQASRTFHKRLVSDLKRIGFEQSLSDPCVLHFMMGDEVLGMIAIHVDDILYAG--IERLAEMVVEALGDSLPTKNLGEVRFFLGCAFARDREAGTIEMSQESYIRSVLERFNVCRTSSIPASLTNDYRSVIEDEGAGDVPFRDVVGSLMWIANQTRPDISNAVRAVARHSHEPNKSHWKAAQKILNYLLETAHLTLKYKQDTMVDVGTLVYVDADFASEATDRRSDSGALVLVADCLVAWISRTQKCVTLSTTEAEYVAMGDGVKEALFVKGMLEFLRPSDRI 581          
BLAST of mRNA_C-tenellus_contig8235.1.1 vs. uniprot
Match: A0A182GIT5_AEDAL (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Aedes albopictus TaxID=7160 RepID=A0A182GIT5_AEDAL)

HSP 1 Score: 197 bits (501), Expect = 8.470e-54
Identity = 131/388 (33.76%), Postives = 217/388 (55.93%), Query Frame = 1
Query:   19 GHKVLGTKMVFTRKVDANGEVERCKARLIIQGFRQRKGEDYFDLFSLTPTHVSLRMLLALKGKMNYVLINSDGKKAFTQADLEETMYVELPEG-KAKFGGAVRFLKKCLYGIVQASQNWNFLLVEALLELRLEQSEANPCLFRMIVDGEAVIIIIVHVDDMMVAEEPVAGYAVCIIEGFNEKFPVVNLGEVTKFMGCRIRRNRKTGTLVVDQSLYIGELVERHGTG----TNYEL-PSITKRVKQEGPVPDD--YRSMIGGIQWAAIMTRPDTCFAVRELTSSVENPNY-DWD--------LLGTKGHRITFGDFGLYGNGPRDQLIGYTDADYANCKDSRLNISDGVVMFGRGWVDWWSRKQKTVTLSTAEAEYVALCELGEKVMFL 1131
            G K +G K +F RK+D +G V R KARL+ QGF Q+ G DY ++F+     V+ R+LL +  +   V+ ++D K A+   +LEE++++  P G + +   AV  L+K LYG+ QA   WN    + L  ++ +QS+ +PCL+ +  +G+    ++++VDDM++A      Y   II+  N  F V +LG+++ F+G +I RN K  +L   Q  YI +++E+ G      + Y L P   ++ +++  +P++  Y S+IG + + A+ TRPD   +V  L  SV  P   DW+        L  T  H +      + G G R+  + Y DAD+AN   SR + S  + +FG G + W SRKQ  V LS+ EAE+VAL    ++++++
Sbjct:   34 GRKAVGCKWIFKRKLDEDGNVVRYKARLVAQGFTQKFGTDYDEVFAPVVRQVTFRVLLTVASQRGMVVKHADVKTAYLNGELEESIFMRQPPGYEDENRDAVCSLQKSLYGLKQAGYVWNKKFDQVLKRMKFQQSKNDPCLY-VRRNGKGYTYLVIYVDDMVIACNDDEEYEE-IIKTLNRHFKVTSLGDISHFLGIKINRNEKGFSL--SQQTYIKQILEQFGMNQAKPSKYPLDPGHIQQKEEQVMLPNNHQYASLIGSLLYVAVNTRPDIAVSVSILGRSVSAPTQADWNEAKRILRYLKLTMDHEL------VLGQGERNLEV-YVDADWANDVKSRKSNSGYLFLFGGGPICWGSRKQTCVALSSTEAEFVALAASCQELLWI 410          
BLAST of mRNA_C-tenellus_contig8235.1.1 vs. uniprot
Match: A0A4Y2K0U2_ARAVE (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=8 Tax=Araneus ventricosus TaxID=182803 RepID=A0A4Y2K0U2_ARAVE)

HSP 1 Score: 199 bits (506), Expect = 1.180e-53
Identity = 131/390 (33.59%), Postives = 207/390 (53.08%), Query Frame = 1
Query:   10 PTDGHKVLGTKMVFTRKVDANGEVERCKARLIIQGFRQRKGEDYFDLFSLTPTHVSLRMLLALKGKMNYVLINSDGKKAFTQADLEETMYVELPEGKAKFGGAVRFLK--KCLYGIVQASQNWNFLLVEALLELRLEQSEANPCLFRMIVDGEAVIIIIVHVDDMMVA--EEPVAGYAVCIIEGFNEKFPVVNLGEVTKFMGCRIRRNRKTGTLVVDQSLYIGELVER----HGTGTNYELPSITKRVKQEG-----PVPDDYRSMIGGIQWAAIMTRPDTCFAVRELTSSVENPNY-DWDLLGTKGHRI-TFGDFGLYGNGPRDQLI-GYTDADYANCKDSRLNISDGVVMFGRGWVDWWSRKQKTVTLSTAEAEYVALCELGEKVMFL 1131
            P  G KV+G +  F  K D+ G +ER KARL+ QGF Q+ G DY + F+   T+ ++R  LA     N  + + D K AF   +LE+ +Y+  PEG  + G   +  K  K +YG+ QA++ W+  + E+L++   EQS+A+PCLF+ + +G  + II V+VDD+++A  EE +      II+   E++ + NLGEV  ++G  I R  K G   ++Q   I E+VE+        TN  +P     +KQEG     P    YR  +G + + A ++RPD   AV  L+   E P   DW+ +      + T  +  L  N  ++ ++  + D D+AN K  R + S  V   G   + W S++Q  V LS+ EAEYV+     + V++L
Sbjct:  144 PPSGKKVIGCRWTFKAKYDSKGNIERYKARLVAQGFSQKFGTDYDETFAPVVTYTTIRTFLAAAAHKNLNVTHVDIKTAFLHGNLEDEVYMSQPEGYIETGQEQKVCKLNKAIYGLKQAARAWHLKIGESLIKYGFEQSKADPCLFKFVNNGNPMYII-VYVDDLLIAGKEEDIRK----IIKELEEEYELKNLGEVNYYLGINIERT-KEGNFALNQKNKIEEIVEKFNLKEAKPTN--IPMDPNYLKQEGEDDILPNNTQYRKAVGALLYIATVSRPDIAVAVNILSRRNEKPRERDWNAVKRIIRYLKTTAELKLIINMDKEPILTAFCDTDWANDKSDRKSTSGSVFKLGNCTIQWMSKRQNCVALSSTEAEYVSAANTAQVVVWL 525          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig8235.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K307_9PHAE2.650e-6135.57Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A182GC29_AEDAL8.940e-5734.26Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JFG2_9PHAE3.560e-5636.21Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5J594_9PHAE1.450e-5532.84Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5JV80_9PHAE6.360e-5532.59Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JWG1_9PHAE1.010e-5432.81Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JLN0_9PHAE3.140e-5435.38Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KN43_9PHAE4.270e-5433.07Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A182GIT5_AEDAL8.470e-5433.76Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A4Y2K0U2_ARAVE1.180e-5333.59Retrovirus-related Pol polyprotein from transposon... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig8235contigC-tenellus_contig8235:258..1665 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog5180.EDN95961
PFAMsRVT_2,Retrotran_gag_2,gag_pre-integrs,rve,zf-CCHC
Model size1382
Max annot lvl4751|Fungi
Hectar predicted targeting categoryother localisation
Exons2
Evalue7.34e-51
EggNOG OGsCOG2801@1|root,KOG0017@2759|Eukaryota,38DPC@33154|Opisthokonta,3NUZ7@4751|Fungi,3QNZW@4890|Ascomycota,20YYK@147548|Leotiomycetes
DescriptionReverse transcriptase (RNA-dependent DNA polymerase)
Cds size1122
COG categoryL
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680790089.148675-UTR-C-tenellus_contig8235:257..4751680790089.148675-UTR-C-tenellus_contig8235:257..475Choristocarpus tenellus KU2346UTRC-tenellus_contig8235 258..475 -
1680790089.178869-UTR-C-tenellus_contig8235:1623..16651680790089.178869-UTR-C-tenellus_contig8235:1623..1665Choristocarpus tenellus KU2346UTRC-tenellus_contig8235 1624..1665 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680790089.1596363-CDS-C-tenellus_contig8235:475..7791680790089.1596363-CDS-C-tenellus_contig8235:475..779Choristocarpus tenellus KU2346CDSC-tenellus_contig8235 476..779 -
1680790089.1701388-CDS-C-tenellus_contig8235:805..16231680790089.1701388-CDS-C-tenellus_contig8235:805..1623Choristocarpus tenellus KU2346CDSC-tenellus_contig8235 806..1623 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig8235.1.1prot_C-tenellus_contig8235.1.1Choristocarpus tenellus KU2346polypeptideC-tenellus_contig8235 476..1623 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-tenellus_contig8235.1.1

>prot_C-tenellus_contig8235.1.1 ID=prot_C-tenellus_contig8235.1.1|Name=mRNA_C-tenellus_contig8235.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=374bp
MVFTRKVDANGEVERCKARLIIQGFRQRKGEDYFDLFSLTPTHVSLRMLL
ALKGKMNYVLINSDGKKAFTQADLEETMYVELPEGKAKFGGAVRFLKKCL
YGIVQASQNWNFLLVEALLELRLEQSEANPCLFRMIVDGEAVIIIIVHVD
DMMVAEEPVAGYAVCIIEGFNEKFPVVNLGEVTKFMGCRIRRNRKTGTLV
VDQSLYIGELVERHGTGTNYELPSITKRVKQEGPVPDDYRSMIGGIQWAA
IMTRPDTCFAVRELTSSVENPNYDWDLLGTKGHRITFGDFGLYGNGPRDQ
LIGYTDADYANCKDSRLNISDGVVMFGRGWVDWWSRKQKTVTLSTAEAEY
VALCELGEKVMFLKQEYMFMQPL*
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mRNA from alignment at C-tenellus_contig8235:258..1665-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-tenellus_contig8235.1.1 ID=mRNA_C-tenellus_contig8235.1.1|Name=mRNA_C-tenellus_contig8235.1.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=1408bp|location=Sequence derived from alignment at C-tenellus_contig8235:258..1665- (Choristocarpus tenellus KU2346)
GTGCCTCATCCCACTGATGGTCACAAGGTACTCGGGACAAAGATGGTGTT TACCAGGAAGGTGGATGCTAATGGAGAAGTGGAAAGGTGTAAGGCCAGGT TGATTATCCAGGGTTTCAGGCAGAGGAAGGGGGAGGATTACTTCGATTTA TTCTCACTAACACCTACACATGTTTCTCTTCGCATGTTACTTGCACTAAA AGGGAAGATGAATTACGTGTTGATCAACAGTGATGGGAAGAAGGCCTTCA CACAGGCTGACTTGGAGGAAACTATGTATGTGGAACTTCCCGAAGGAAAG GCAAAGTTTGGTGGAGCAGTGAGATTTCTGAAGAAGTGCCTGTATGGGAT AGTCCAGGCTTCTCAAAACTGGAATTTTCTGCTGGTGGAAGCTTTGTTGG AGCTGAGATTGGAACAATCTGAGGCAAATCCATGTCTGTTCAGAATGATC GTGGATGGTGAGGCTGTGATAATCATTATTGTTCATGTGGATGACATGAT GGTGGCTGAGGAACCAGTGGCTGGTTATGCTGTGTGTATCATTGAGGGAT TTAATGAGAAGTTCCCGGTGGTGAATTTGGGTGAGGTAACCAAATTTATG GGATGCAGGATCAGGAGGAACAGGAAAACCGGGACACTTGTGGTGGATCA GAGCTTGTACATTGGAGAGTTGGTTGAAAGACACGGTACTGGCACGAATT ACGAGCTACCATCCATCACAAAGAGAGTGAAGCAAGAGGGACCTGTTCCA GACGACTACAGATCTATGATTGGTGGTATACAATGGGCTGCTATCATGAC TAGACCTGATACATGTTTTGCAGTTAGAGAGTTGACTTCTAGTGTAGAGA ATCCAAATTAGTCTGATTGGTACAATGCTAGGAGAGTGATTGGGACCTGT TGGGTACTAAAGGGCATAGAATTACCTTTGGTGACTTTGGATTGTATGGG AATGGACCAAGAGATCAGTTAATTGGCTATACAGATGCTGATTATGCAAA CTGCAAGGACAGTAGATTGAACATTTCTGATGGTGTTGTAATGTTTGGGA GAGGATGGGTTGACTGGTGGTCCAGGAAGCAGAAAACGGTTACACTGTCT ACTGCTGAGGCTGAGTATGTTGCATTGTGTGAGTTGGGAGAAAAGGTAAT GTTCCTCAAGCAAGAGTACATGTTTATGCAACCACTTTGAAGGATTACCA TGTATCTGTGTTCGAGGATAATGTTGGTGCAATCAAGACTGCTGTGAAGG CAGTATCTGGTGGTAGAACCAAGCACATTGATATTAGGTATCACTATGTA CATCAGTTGGAGAGGGAACGAAAGATAGCTATTGGATATTTGTCAACAGA GTTCCAACATGCTGATCTTTTTACTAGGGGTTTGTCTAAGAAATCTTTCA ATAGGCAT
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Coding sequence (CDS) from alignment at C-tenellus_contig8235:258..1665-

>mRNA_C-tenellus_contig8235.1.1 ID=mRNA_C-tenellus_contig8235.1.1|Name=mRNA_C-tenellus_contig8235.1.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=1122bp|location=Sequence derived from alignment at C-tenellus_contig8235:258..1665- (Choristocarpus tenellus KU2346)
ATGGTGTTTACCAGGAAGGTGGATGCTAATGGAGAAGTGGAAAGGTGTAA
GGCCAGGTTGATTATCCAGGGTTTCAGGCAGAGGAAGGGGGAGGATTACT
TCGATTTATTCTCACTAACACCTACACATGTTTCTCTTCGCATGTTACTT
GCACTAAAAGGGAAGATGAATTACGTGTTGATCAACAGTGATGGGAAGAA
GGCCTTCACACAGGCTGACTTGGAGGAAACTATGTATGTGGAACTTCCCG
AAGGAAAGGCAAAGTTTGGTGGAGCAGTGAGATTTCTGAAGAAGTGCCTG
TATGGGATAGTCCAGGCTTCTCAAAACTGGAATTTTCTGCTGGTGGAAGC
TTTGTTGGAGCTGAGATTGGAACAATCTGAGGCAAATCCATGTCTGTTCA
GAATGATCGTGGATGGTGAGGCTGTGATAATCATTATTGTTCATGTGGAT
GACATGATGGTGGCTGAGGAACCAGTGGCTGGTTATGCTGTGTGTATCAT
TGAGGGATTTAATGAGAAGTTCCCGGTGGTGAATTTGGGTGAGGTAACCA
AATTTATGGGATGCAGGATCAGGAGGAACAGGAAAACCGGGACACTTGTG
GTGGATCAGAGCTTGTACATTGGAGAGTTGGTTGAAAGACACGGTACTGG
CACGAATTACGAGCTACCATCCATCACAAAGAGAGTGAAGCAAGAGGGAC
CTGTTCCAGACGACTACAGATCTATGATTGGTGGTATACAATGGGCTGCT
ATCATGACTAGACCTGATACATGTTTTGCAGTTAGAGAGTTGACTTCTAG
TGTAGAGAATCCAAATTATGATTGGGACCTGTTGGGTACTAAAGGGCATA
GAATTACCTTTGGTGACTTTGGATTGTATGGGAATGGACCAAGAGATCAG
TTAATTGGCTATACAGATGCTGATTATGCAAACTGCAAGGACAGTAGATT
GAACATTTCTGATGGTGTTGTAATGTTTGGGAGAGGATGGGTTGACTGGT
GGTCCAGGAAGCAGAAAACGGTTACACTGTCTACTGCTGAGGCTGAGTAT
GTTGCATTGTGTGAGTTGGGAGAAAAGGTAATGTTCCTCAAGCAAGAGTA
CATGTTTATGCAACCACTTTGA
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