mRNA_C-tenellus_contig8174.1.3 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig8174.1.3 vs. uniprot
Match: D7FSM0_ECTSI (Divalent cation transporter, carboxyterminus n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSM0_ECTSI) HSP 1 Score: 335 bits (859), Expect = 8.470e-107 Identity = 188/244 (77.05%), Postives = 212/244 (86.89%), Query Frame = 1 Query: 1 LLVQGDSWVEAAHRLRAANVTFAPVVDDRGDLLAVLSPADLLKEMEIEATDDVMRYSGSGGGESYFGTPLMRLVASRVGWLVSLLCLQSLSSVILQRYQRVIEKHIVIALFLTMLTGTAGNAGNQASCSAMVIRGLATGEINASNARQVVLREAKAAMCAALVLSGASFLRVLLTPGASILATLAVSVAMGATVVGAVMFGTVAPILLDRFGVDPVNFASPALATLTDVSGVFILCSVASLMLG 732 +L +GDSW +AAHRLR ANV APVVD G L+AVL+P+DLL+EMEIEATDD+MR SGSGGGESYFGTPL LVASRVGWLVSLLCLQS SS+ILQ +Q VIEK+IVIALFLTMLTGTAGNAGNQ+S A+VIRGLAT EI+ N +V+ REA+A + +A VLS ASF+RVLLTPGA+ +ATLAVSVAMG TVVGAVMFGT+API+L GVDPVNFASPALATLTDVSGVFILCSVA LMLG Sbjct: 169 MLHEGDSWEDAAHRLRQANVLAAPVVDSDGVLVAVLNPSDLLQEMEIEATDDIMRQSGSGGGESYFGTPLPSLVASRVGWLVSLLCLQSFSSLILQSFQNVIEKNIVIALFLTMLTGTAGNAGNQSS--AIVIRGLATEEIHQGNRWRVIWREARAGVASACVLSVASFVRVLLTPGATTVATLAVSVAMGTTVVGAVMFGTIAPIVLHGMGVDPVNFASPALATLTDVSGVFILCSVAKLMLG 410
BLAST of mRNA_C-tenellus_contig8174.1.3 vs. uniprot
Match: A0A835YYN6_9STRA (CBS domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYN6_9STRA) HSP 1 Score: 329 bits (844), Expect = 1.230e-106 Identity = 179/245 (73.06%), Postives = 212/245 (86.53%), Query Frame = 1 Query: 1 LLVQGDSWVEAAHRLRAANVTFAPVVDDRGDLLAVLSPADLLKEMEIEATDDVMRYSGSGGGESYFGTPLMRLVASRVGWLVSLLCLQSLSSVILQRYQRVIEKHIVIALFLTMLTGTAGNAGNQASCSAMVIRGLATGEINASNARQVVLREAKAAMCAALVLSGASFLRVLLTPGASILATLAVSVAMGATVVGAVMFGTVAPILLDRFGVDPVNFASPALATLTDVSGVFILCSVASLMLGG 735 +L +GD+W EAA RLR A ++ APVVD+ G L+A+L+P DLL EMEIEATDD+ R+SGSGGGE+YFGTPLM+LV R GWLVSLL LQSLSSVIL +Q VIE+HIVIALFLTMLTGTAGNAGNQ+S AMVIRGLATGEIN++N + + REAKAA+ AA++LS ASF RV +TPG++ LA++AVSVAMGATVVGAV+FGT P+LLDRFGVDPVNFASPALATLTDVSGV ILC+VAS++L G Sbjct: 23 VLKEGDAWEEAAQRLRKAGISSAPVVDEDGFLVAILNPTDLLMEMEIEATDDISRFSGSGGGETYFGTPLMKLVLRRCGWLVSLLMLQSLSSVILTHFQSVIERHIVIALFLTMLTGTAGNAGNQSS--AMVIRGLATGEINSANKMRCLWREAKAALIAAVILSAASFARVWMTPGSTWLASVAVSVAMGATVVGAVLFGTATPLLLDRFGVDPVNFASPALATLTDVSGVLILCTVASMLLSG 265
BLAST of mRNA_C-tenellus_contig8174.1.3 vs. uniprot
Match: A0A6H5JKL2_9PHAE (CBS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKL2_9PHAE) HSP 1 Score: 336 bits (862), Expect = 1.710e-105 Identity = 188/244 (77.05%), Postives = 212/244 (86.89%), Query Frame = 1 Query: 1 LLVQGDSWVEAAHRLRAANVTFAPVVDDRGDLLAVLSPADLLKEMEIEATDDVMRYSGSGGGESYFGTPLMRLVASRVGWLVSLLCLQSLSSVILQRYQRVIEKHIVIALFLTMLTGTAGNAGNQASCSAMVIRGLATGEINASNARQVVLREAKAAMCAALVLSGASFLRVLLTPGASILATLAVSVAMGATVVGAVMFGTVAPILLDRFGVDPVNFASPALATLTDVSGVFILCSVASLMLG 732 +L +GDSW + AHRLR ANV APVVD G L+AVL+P+DLL+EMEIEATDD+MR SGSGGGESYFGTPL LVASRVGWLVSLLCLQS SSVILQ +Q VIEK+IVIALFLTMLTGTAGNAGNQ+S A+VIRGLAT EI+ N +V+ REA+A + +A VLS ASF+RVLLTPGA+ +ATLAVS+AMGATVVGAVMFGT+API+L GVDPVNFASPALATLTDVSGVFILCSVA LMLG Sbjct: 302 MLHEGDSWEDTAHRLRQANVLAAPVVDSDGVLVAVLNPSDLLQEMEIEATDDIMRQSGSGGGESYFGTPLPSLVASRVGWLVSLLCLQSFSSVILQSFQNVIEKNIVIALFLTMLTGTAGNAGNQSS--AIVIRGLATEEIHQGNRWRVIWREARAGVASACVLSVASFIRVLLTPGATTVATLAVSIAMGATVVGAVMFGTIAPIVLHGMGVDPVNFASPALATLTDVSGVFILCSVAKLMLG 543
BLAST of mRNA_C-tenellus_contig8174.1.3 vs. uniprot
Match: A0A4D9CYH9_9STRA (CBS domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CYH9_9STRA) HSP 1 Score: 268 bits (685), Expect = 1.150e-78 Identity = 141/239 (59.00%), Postives = 192/239 (80.33%), Query Frame = 1 Query: 16 DSWVEAAHRLRAANVTFAPVVDDRGDLLAVLSPADLLKEMEIEATDDVMRYSGSGGGESYFGTPLMRLVASRVGWLVSLLCLQSLSSVILQRYQRVIEKHIVIALFLTMLTGTAGNAGNQASCSAMVIRGLATGEINASNARQVVLREAKAAMCAALVLSGASFLRVLLTPGASILATLAVSVAMGATVVGAVMFGTVAPILLDRFGVDPVNFASPALATLTDVSGVFILCSVASLMLG 732 D + +A +RA +T+APVV + ++ +++P+D+LKEME+EATDDV RYSGSG ES+FGTP+++LV +R WLVSLL LQSLSS+IL + +IE+H+VIALFLTMLTGTAGNAGNQ+S AMVIRG+ATGEIN N + V+RE KAA+ + +L+ A+FLRV +TPG+++++T+AV++A+ TVVGA FGTVAP+++DR GVDP N ASPAL+TL DV GV +LC+++S MLG Sbjct: 366 DEYDDAIGAMRAKRLTYAPVVTEDEVVVGIITPSDMLKEMEMEATDDVSRYSGSGSTESFFGTPVLQLVTARASWLVSLLMLQSLSSIILTHFSALIERHLVIALFLTMLTGTAGNAGNQSS--AMVIRGIATGEINRKNGWKAVVREVKAALLMSALLAVAAFLRVYITPGSTVMSTVAVTLALSVTVVGACAFGTVAPLVMDRLGVDPANCASPALSTLVDVGGVLVLCALSSAMLG 602
BLAST of mRNA_C-tenellus_contig8174.1.3 vs. uniprot
Match: A0A0G4EE00_VITBC (CBS domain-containing protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4EE00_VITBC) HSP 1 Score: 251 bits (642), Expect = 4.650e-74 Identity = 139/248 (56.05%), Postives = 191/248 (77.02%), Query Frame = 1 Query: 16 DSWVEAAHRLRAANVTFAPVVDDRGDLLAVLSPADLLKEMEIEATDDVMRYSG-------SGGGESYFGTPLMRLVASRVGWLVSLLCLQSLSSVILQRYQRVIEKHIVIALFLTMLTGTAGNAGNQASCSAMVIRGLATGEINASNARQVVLREAKAAMCAALVLSGASFLRVLLTPGASILATLAVSVAMGATVVGAVMFGTVAPILLDRFGVDPVNFASPALATLTDVSGVFILCSVASLMLGGG 738 ++ EA+ RLR VT AP+VD++G L+ +LSP DLL EME E T+D++R+ G G+SYF TP++ + SR GW+VSLL LQSLSS++L ++Q VIE+++VIALFLTMLTGTAGNAGNQ+S A VIRGLATGEI +NA +VVLRE + A A++L+GA+F+RV LTPG+++ + + V +AMGAT + A++ GT++PI+L+ G+DP N ASPALAT TDV+GV ILC++AS++LGGG Sbjct: 198 ENLEEASKRLRQRFVTMAPLVDEKGQLVGILSPNDLLNEMEAELTEDLLRFEGIFPSETMEKVGDSYFATPVIEHIKSRAGWVVSLLFLQSLSSIVLTKFQGVIERNLVIALFLTMLTGTAGNAGNQSS--ATVIRGLATGEITHANAWKVVLRELRIASVMAVLLAGAAFMRVALTPGSTVASAVVVGLAMGATCLVAIILGTLSPIILEWIGLDPCNCASPALATATDVAGVLILCTIASVLLGGG 443
BLAST of mRNA_C-tenellus_contig8174.1.3 vs. uniprot
Match: A0A6T6NC75_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A6T6NC75_9RHOD) HSP 1 Score: 227 bits (579), Expect = 9.270e-65 Identity = 130/242 (53.72%), Postives = 172/242 (71.07%), Query Frame = 1 Query: 16 DSWVEAAHRLRAANVTFAPVVDDRGDLLAVLSPADLLKEMEIEATDDVMRYSGSGG----GESYFGTPLMRLVASRVGWLVSLLCLQSLSSVILQRYQRVIEKHIVIALFLTMLTGTAGNAGNQASCSAMVIRGLATGEINASNARQVVLREAKAAMCAALVLSGASFLRVLLTPGASILATLAVSVAMGATVVGAVMFGTVAPILLDRFGVDPVNFASPALATLTDVSGVFILCSVASLML 729 D +LR NV APVVD L+ VL+ D+++E+E EATDD++RY G GG ESYFGT + +L R+ WLV LL LQSLSS++L RYQ +IE ++V+ALFLTMLTGT GNAGNQ+S A++IRGLATGEI N +VV++E + + VL+ SF RV T G+++L++ VS+A+ T V A++ GT+AP+LL+R GVDP N ASPALATLTDV GV ILCS+AS++L Sbjct: 212 DDLDNVLRKLRRDNVLIAPVVDVEEKLVGVLTATDMIRELEFEATDDLLRYGGVGGDEETAESYFGTSIRKLFFGRITWLVGLLMLQSLSSIVLGRYQSLIEANVVLALFLTMLTGTGGNAGNQSS--ALIIRGLATGEIRRENYSRVVMKEIAVGISLSFVLAIVSFGRVYFTTGSNVLSSFTVSIAVLLTTVFAILGGTIAPMLLERVGVDPCNCASPALATLTDVGGVLILCSLASILL 451
BLAST of mRNA_C-tenellus_contig8174.1.3 vs. uniprot
Match: A0A0G4HK72_9ALVE (MgtE domain-containing protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4HK72_9ALVE) HSP 1 Score: 209 bits (531), Expect = 6.420e-57 Identity = 138/303 (45.54%), Postives = 176/303 (58.09%), Query Frame = 1 Query: 16 DSWVEAAHRLRAANVTFAPVVDDRGDLLAVLSPADLLKEMEIEATDDVMRYSG-------------------------------------------------------------SGGG--ESYFGTPLMRLVASRVGWLVSLLCLQSLSSVILQRYQRVIEKHIVIALFLTMLTGTAGNAGNQASCSAMVIRGLATGEINASNARQVVLREAKAAMCAALVLSGASFLRVLLTPGASILATLAVSVAMGATVVGAVMFGTVAPILLDRFGVDPVNFASPALATLTDVSGVFILCSVASLMLGG 735 ++ A RL N FAP++D RG L+ VLSP D+L+E E E TDD++RY G GGG +Y+ TP+ V SR WLV+LL LQSLSS+IL +Q V+++HIVIALFLTMLTGTAGNAGNQ+S A VIRGLATGE+ NA +VV RE + A L+LS ASF+RV ++ G S+ A+ V+ AMG T VGAV+ GTV PI+L RFG+DP ASPALAT+TDV GV++LCS+A+ +L G Sbjct: 242 ENLERACLRLTRKNAAFAPLLDSRGSLMGVLSPLDVLRERETEFTDDMLRYEGIFFDPPRIQEMKERERXXXXXXXXXXXXXXXXXXXGSGKDVSALSPTADALGEWGEMGESAEGGGMLSTYWKTPITYHVKSRASWLVALLGLQSLSSIILAHFQDVVQRHIVIALFLTMLTGTAGNAGNQSS--ATVIRGLATGEVTDQNAMEVVGREVRIAAIVGLMLSAASFVRVFVS-GGSLGASAVVASAMGLTTVGAVLLGTVVPIVLARFGLDPCTCASPALATITDVLGVYVLCSLANSVLTG 541
BLAST of mRNA_C-tenellus_contig8174.1.3 vs. uniprot
Match: A0A7J7ILB5_9RHOD (CBS domain-containing protein n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7ILB5_9RHOD) HSP 1 Score: 207 bits (527), Expect = 9.570e-56 Identity = 123/251 (49.00%), Postives = 169/251 (67.33%), Query Frame = 1 Query: 1 LLVQGDSWVEAAHRLRAANVTFAPVVDDRGDLLAVLSPADLLKEMEIEATDDVMRYSG------SGGGESYFGTPLMRLVASRVGWLVSLLCLQSLSSVILQRYQRVIEKHIVIALFLTMLTGTAGNAGNQASCSAMVIRGLATGEINASNARQVVLREAKAAMCAALVLSGASFLRVLLTPGASILATLAVSVAMGATVVGAVMFGTVAPILLDRFGVDPVNFASPALATLTDVSGVFILCSVASLMLGG 735 +L + + A RLR A APVVD L+ +++ AD+++EME+EATDD++R+ G + ESYF T V R WLV+LL LQS+SS++L Y +IE+H+V+ALFLTM+ G GNAGNQ+S A+VIRGLATGEINASNA +V+ RE A VL+ F+RV ++ G ILA++ VS ++ TV AV+ GT+AP++L R G+DP + ASP L+TLTD+ GV LC VAS++LGG Sbjct: 366 VLTVDEEFEAAVRRLRNAGALTAPVVDSELRLVGLITAADIIREMELEATDDILRFGGVESPLQTNDIESYFKTSTRSFVIGRSAWLVALLLLQSVSSIVLGHYSSLIERHVVLALFLTMMVGAGGNAGNQSS--ALVIRGLATGEINASNAGRVLWRELVVGCTIATVLAAVGFVRVSMS-GGDILASVTVSASLWITVFMAVLTGTIAPLVLARLGLDPCHCASPLLSTLTDIGGVLALCLVASIILGG 613
BLAST of mRNA_C-tenellus_contig8174.1.3 vs. uniprot
Match: M2WSY5_GALSU (Magnesium transporter, MgtE family n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2WSY5_GALSU) HSP 1 Score: 197 bits (500), Expect = 9.370e-55 Identity = 120/248 (48.39%), Postives = 169/248 (68.15%), Query Frame = 1 Query: 1 LLVQGDSWVE-AAHRLRAANVTFAPVVDDRGDLLAVLSPADLLKEMEIEATDDVMRYSGSGGGE---SYFGTPLMRLVASRVGWLVSLLCLQSLSSVILQRYQRVIEKHIVIALFLTMLTGTAGNAGNQASCSAMVIRGLATGEINASNARQVVLREAKAAMCAALVLSGASFLRVLLTPGASILATLAVSVAMGATVVGAVMFGTVAPILLDRFGVDPVNFASPALATLTDVSGVFILCSVASLMLG 732 ++ + D+ +E AA ++R+ V APVVD G+ L +++ D+++E+E EA +D MR SG + SYF T L+ R+ WLV+LL QS+SS+IL +Q +IE+H+VIALFLTML GT GNAGNQ+S A+VIRGLATGEI+ NA VV RE + A+ A +LS F+RVL T +I A L VS+A+ V+ +++ G V P+LL++ G DP ASPALAT TDV GV ++C+VA ++LG Sbjct: 73 VVFRDDTSLEIAARKVRSFGVFCAPVVDSEGNFLGIVNALDIIREVEFEAAEDFMRVSGLNSVDVFQSYFETSSFSLIRERLSWLVALLLFQSISSIILGFFQDLIERHVVIALFLTMLIGTGGNAGNQSS--AIVIRGLATGEIDRRNAYLVVSREFRIAVIMASILSIVGFVRVLFTVPNNIKAALTVSIALFLIVISSIVAGAVTPLLLEQCGADPAYCASPALATATDVVGVLLICAVAIVVLG 318
BLAST of mRNA_C-tenellus_contig8174.1.3 vs. uniprot
Match: A0A7S0XVN6_HEMAN (Hypothetical protein (Fragment) n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0XVN6_HEMAN) HSP 1 Score: 191 bits (486), Expect = 5.940e-52 Identity = 114/234 (48.72%), Postives = 160/234 (68.38%), Query Frame = 1 Query: 67 APVVDDRGDLLAVLSPADLLKEMEIEATDDVMRYSGSGGG----------ESYFGTPLMRLVASRVGWLVSLLCLQSLSSVILQRYQRVIEKHIVIALFLTMLTGTAGNAGNQASCSAMVIRGLATGEINASNARQVVLREAKAAMCAALVLSGASFLRVLLTPGASILATLAVSVAMGATVVGAVMFGTVAPILLDRFGVDPVNFASPALATLTDVSGVFILCSVASLMLGGG 738 AP++D ++ V++P D+LK+ IE TDD++RYSG SYFGTP+ + R L LL LQSLSSV+L RYQ ++E+++ +ALFLTMLTGT GNAGNQ+S A++IRGL+TGEI+ +N+ +VV+RE A+ AL+L+ A+F RV+LT GA + + ++VA ATVV AV GT+ P+ L R G+DP N +SP LATLTD+ GV +LC V++ +L G Sbjct: 153 APLLDRENRIVGVINPQDVLKQQMIEDTDDMLRYSGVINPMRDTEENLPYASYFGTPVWTHIRQRSTVLTVLLLLQSLSSVVLSRYQGLLERNVFLALFLTMLTGTGGNAGNQSS--ALIIRGLSTGEIDDNNSHKVVIREVVASSVIALMLAAAAFARVMLTKGAPLQMGITIAVATYATVVFAVAGGTIVPLALQRIGLDPCNLSSPMLATLTDIMGVLLLCVVSTAVLEPG 384 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig8174.1.3 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig8174.1.3 >prot_C-tenellus_contig8174.1.3 ID=prot_C-tenellus_contig8174.1.3|Name=mRNA_C-tenellus_contig8174.1.3|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=203bp MEIEATDDVMRYSGSGGGESYFGTPLMRLVASRVGWLVSLLCLQSLSSVIback to top mRNA from alignment at C-tenellus_contig8174:358..3177+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig8174.1.3 ID=mRNA_C-tenellus_contig8174.1.3|Name=mRNA_C-tenellus_contig8174.1.3|organism=Choristocarpus tenellus KU2346|type=mRNA|length=2820bp|location=Sequence derived from alignment at C-tenellus_contig8174:358..3177+ (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig8174:358..3177+ >mRNA_C-tenellus_contig8174.1.3 ID=mRNA_C-tenellus_contig8174.1.3|Name=mRNA_C-tenellus_contig8174.1.3|organism=Choristocarpus tenellus KU2346|type=CDS|length=609bp|location=Sequence derived from alignment at C-tenellus_contig8174:358..3177+ (Choristocarpus tenellus KU2346)back to top |