mRNA_C-tenellus_contig813.9.2 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig813.9.2 vs. uniprot
Match: A0A067CS54_SAPPC (Uncharacterized protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067CS54_SAPPC) HSP 1 Score: 75.9 bits (185), Expect = 2.490e-13 Identity = 38/55 (69.09%), Postives = 49/55 (89.09%), Query Frame = 3 Query: 576 DAQDLTLFVKSVMEQMQNRISQMSEAIIGRVDEMGERIDDLEKSIQDLMVQAEIE 740 D+Q+LT+FV+S++EQMQ+R +QMSEAIIGR+DEMG RIDDLEKSI +LM Q+ E Sbjct: 16 DSQELTVFVQSLLEQMQSRFAQMSEAIIGRIDEMGSRIDDLEKSIGELMEQSSTE 70
BLAST of mRNA_C-tenellus_contig813.9.2 vs. uniprot
Match: D8LRV3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRV3_ECTSI) HSP 1 Score: 73.9 bits (180), Expect = 9.770e-13 Identity = 40/51 (78.43%), Postives = 42/51 (82.35%), Query Frame = 3 Query: 612 MEQMQNRISQMSEAIIGRVDEMGERIDDLEKSIQDLMVQAEIENPDELKTE 764 MEQMQNR SQMS+ IIGRVDEM RIDDLEKSIQDLMVQAEIE D+ E Sbjct: 1 MEQMQNRFSQMSDTIIGRVDEMSTRIDDLEKSIQDLMVQAEIEPADDSSAE 51
BLAST of mRNA_C-tenellus_contig813.9.2 vs. uniprot
Match: F0WJR0_9STRA (Predicted protein putative n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WJR0_9STRA) HSP 1 Score: 74.7 bits (182), Expect = 1.020e-12 Identity = 38/55 (69.09%), Postives = 48/55 (87.27%), Query Frame = 3 Query: 576 DAQDLTLFVKSVMEQMQNRISQMSEAIIGRVDEMGERIDDLEKSIQDLMVQAEIE 740 +AQDLT+FV++++EQMQNR SQMS+AIIGR+D+MG RID+LEKSI DLM Q E Sbjct: 19 EAQDLTVFVQTLLEQMQNRFSQMSDAIIGRIDDMGTRIDELEKSIGDLMDQTNDE 73
BLAST of mRNA_C-tenellus_contig813.9.2 vs. uniprot
Match: A0A024USC6_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024USC6_9STRA) HSP 1 Score: 73.2 bits (178), Expect = 3.000e-12 Identity = 36/51 (70.59%), Postives = 47/51 (92.16%), Query Frame = 3 Query: 576 DAQDLTLFVKSVMEQMQNRISQMSEAIIGRVDEMGERIDDLEKSIQDLMVQ 728 D+Q+LT+FV+S++EQMQ+R +QMSEAIIGR+DEMG RIDDLEKSI +L+ Q Sbjct: 17 DSQELTVFVQSLLEQMQSRFAQMSEAIIGRIDEMGSRIDDLEKSIGELLEQ 67
BLAST of mRNA_C-tenellus_contig813.9.2 vs. uniprot
Match: A0A7S2ERV2_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S2ERV2_9STRA) HSP 1 Score: 70.5 bits (171), Expect = 6.850e-11 Identity = 33/57 (57.89%), Postives = 47/57 (82.46%), Query Frame = 3 Query: 576 DAQDLTLFVKSVMEQMQNRISQMSEAIIGRVDEMGERIDDLEKSIQDLMVQAEIENP 746 D QDL++FV+ ++EQMQ R S M ++IIGR+DEMG+RI+DLEKS+ DLM +A ++ P Sbjct: 39 DPQDLSVFVEDLLEQMQKRFSHMGDSIIGRIDEMGDRIEDLEKSVSDLMERAGVDPP 95
BLAST of mRNA_C-tenellus_contig813.9.2 vs. uniprot
Match: A0A7S2RXN8_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2RXN8_9STRA) HSP 1 Score: 69.3 bits (168), Expect = 1.170e-10 Identity = 38/67 (56.72%), Postives = 52/67 (77.61%), Query Frame = 3 Query: 582 QDLTLFVKSVMEQMQNRISQMSEAIIGRVDEMGERIDDLEKSIQDLMVQAEIENPDELKTETPGSNT 782 QDL++FV++++ QMQ+R QMSEAI+ R+DEMG+RID LEKSI DLM QA +++ DE + SNT Sbjct: 26 QDLSIFVQNLLTQMQSRFQQMSEAIVTRIDEMGDRIDGLEKSIGDLMNQAGVQS-DEPGAASSSSNT 91
BLAST of mRNA_C-tenellus_contig813.9.2 vs. uniprot
Match: A0A1W0A769_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A769_9STRA) HSP 1 Score: 68.6 bits (166), Expect = 1.230e-10 Identity = 40/70 (57.14%), Postives = 52/70 (74.29%), Query Frame = 3 Query: 558 SADVPVDAQDLTLFVKSVMEQMQNRISQMSEAIIGR---------VDEMGERIDDLEKSIQDLMVQAEIE 740 S +V D+Q+LT+FV+S++EQMQ+R +QMSEAIIGR +DEMG RIDDLEKSI +LM Q+ E Sbjct: 10 STNVQQDSQELTVFVQSLLEQMQSRFAQMSEAIIGRNILFNAVVLLDEMGTRIDDLEKSIGELMEQSATE 79
BLAST of mRNA_C-tenellus_contig813.9.2 vs. uniprot
Match: A0A6A3Y5M2_9STRA (Uncharacterized protein n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6A3Y5M2_9STRA) HSP 1 Score: 68.9 bits (167), Expect = 2.190e-10 Identity = 43/88 (48.86%), Postives = 55/88 (62.50%), Query Frame = 3 Query: 570 PVDAQDLTLFVKSVMEQMQNRISQMSEAIIGR------------------VDEMGERIDDLEKSIQDLMVQAEIENPDELKTETPGSN 779 P DAQDLT+FV+S++EQMQ+R +QMS+AIIGR +DEMG RID+LEKSI DLM Q + D K + P +N Sbjct: 23 PTDAQDLTVFVQSLLEQMQSRFAQMSDAIIGRNILFNSLHCAICCCGGSLLDEMGSRIDELEKSIGDLMEQTNEDGSD--KNQEPAAN 108
BLAST of mRNA_C-tenellus_contig813.9.2 vs. uniprot
Match: A0A7S2EXB2_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EXB2_TRICV) HSP 1 Score: 69.3 bits (168), Expect = 4.730e-10 Identity = 34/63 (53.97%), Postives = 48/63 (76.19%), Query Frame = 3 Query: 558 SADVPVDAQDLTLFVKSVMEQMQNRISQMSEAIIGRVDEMGERIDDLEKSIQDLMVQAEIENP 746 S D + +DL LFV+ ++EQMQ R SQM ++I+GR+D+MG+RIDDLE+S+ DLM QA + P Sbjct: 71 SGDANGEPEDLNLFVRDLLEQMQARFSQMGDSILGRIDKMGDRIDDLERSVNDLMDQAGVVPP 133
BLAST of mRNA_C-tenellus_contig813.9.2 vs. uniprot
Match: C1MY20_MICPC (Predicted protein n=1 Tax=Micromonas pusilla (strain CCMP1545) TaxID=564608 RepID=C1MY20_MICPC) HSP 1 Score: 66.2 bits (160), Expect = 7.980e-10 Identity = 36/81 (44.44%), Postives = 52/81 (64.20%), Query Frame = 3 Query: 537 GQPTPKQSADVPVDAQDLTLFVKSVMEQMQNRISQMSEAIIGRVDEMGERIDDLEKSIQDLMVQAEIENPDELKTETPGSN 779 G PTP P DLT FV++++ QMQ+R QMS++II R+DEMG+R+DDLE+S+ +L+ QA+ E T G + Sbjct: 4 GAPTPGGG---PQSTADLTTFVQNLLTQMQSRFQQMSDSIITRIDEMGDRVDDLERSVGELIAQADDEGATNAATNAEGGD 81 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig813.9.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig813.9.2 >prot_C-tenellus_contig813.9.2 ID=prot_C-tenellus_contig813.9.2|Name=mRNA_C-tenellus_contig813.9.2|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=96bp MSHTPVILDGLQDGQPTPKQSADVPVDAQDLTLFVKSVMEQMQNRISQMSback to top mRNA from alignment at C-tenellus_contig813:12060..15746+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig813.9.2 ID=mRNA_C-tenellus_contig813.9.2|Name=mRNA_C-tenellus_contig813.9.2|organism=Choristocarpus tenellus KU2346|type=mRNA|length=3687bp|location=Sequence derived from alignment at C-tenellus_contig813:12060..15746+ (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig813:12060..15746+ >mRNA_C-tenellus_contig813.9.2 ID=mRNA_C-tenellus_contig813.9.2|Name=mRNA_C-tenellus_contig813.9.2|organism=Choristocarpus tenellus KU2346|type=CDS|length=288bp|location=Sequence derived from alignment at C-tenellus_contig813:12060..15746+ (Choristocarpus tenellus KU2346)back to top |