mRNA_C-tenellus_contig8123.4.1 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig8123.4.1 vs. uniprot
Match: D7FH04_ECTSI (UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase, family GT41 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH04_ECTSI) HSP 1 Score: 339 bits (870), Expect = 7.470e-105 Identity = 215/504 (42.66%), Postives = 263/504 (52.18%), Query Frame = 1 Query: 1 LLAKGCRELRDGDYDHATETYSIAVMLESRSAEAHCGLGKALIAAGNRTDGFESLVTAFQLDSLLPEVKDGFREYYRKEIEADPSSVDAYEGLAALCIDSGRPEEAASCYSRCLELTISEEAGRNGEN----------GGELTD----------RRDRWEVALFKCRAALCDWKEWDASTEALRVAVRR-----------GGIEXXXXXXXXXXXXX-----------------------------------------------VLHPFDSLSASLSPEECLTVARQQSRWV---------------EAATVKMEDGSVFVEVAEIEQ--DGHWDQSS----RTGGGQRLRLGYMSGDLMGTHPLTHLMQARLGTQECDFDGTFGSHDRSRFEVYLYSLNAADGSKERHRMEKDVEHFRDLSAMTSQEAARTISEDCVDVLVNLNGYAGTSRSADVLVWHPASILVSYMGFPGTMGSSRLSNYILADGIVIPESLREHYSEKVM 1215 LLA G + + GD + A + A RSA LG+AL+ G +GF LV AF +DSL P VKDGFREYYR EIEADP+++D +EGLAALC+DSG PEEAA+ Y RCL L + A G G L+ R+DRW VALFKC A+LC W +W+ LR AVRR GG+ LHPFDSLSA LS +CL VA+QQ+ V E + E+G V+ + Q G SS R G R+RLGY+SGDLMGTHPLTHLMQ+ TFG HDR FEV+LY+LN DGS R RME++VE+FRDLS MT+ EAA I++D V VLVNL GYAGT +SAD+ PA++ VSYMGFPGTMGSS + +YILAD +V+P LR YSEKV+ Sbjct: 67 LLALGRQHTQAGDLESAVYQFEQAASQAPRSAVCQTELGRALVRLGRGQEGFNCLVAAFGIDSLCPGVKDGFREYYRAEIEADPNNIDLHEGLAALCVDSGNPEEAAALYRRCLGLHAAASAEGGGRTPSFSSSDPSAAGHLSSKEATEAAAAARKDRWSVALFKCNASLCQWDDWNGEALTLRTAVRRREXXXXXXXXXGGVGGRLSSVEDDGDLVHRLLLGYEDDDFERLVPRDKQQRQGNNVGDSDNGGVNGDAGAGPSRPALHPFDSLSAPLSIGDCLAVAQQQTSGVLSEARGGNSGPRGRDEEKRILGEEGVGGVQGQSLRQFHSGFSSPSSSPLLRDERG-RVRLGYVSGDLMGTHPLTHLMQS-----------TFGMHDRDSFEVFLYALNPDDGSAPRRRMEREVENFRDLSMMTAGEAAAAIADDGVGVLVNLGGYAGTVKSADIFALRPAAVAVSYMGFPGTMGSSEMVDYILADAVVVPPELRRFYSEKVL 558
BLAST of mRNA_C-tenellus_contig8123.4.1 vs. uniprot
Match: A0A6H5K431_9PHAE (GT41 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K431_9PHAE) HSP 1 Score: 298 bits (762), Expect = 1.440e-89 Identity = 198/488 (40.57%), Postives = 248/488 (50.82%), Query Frame = 1 Query: 1 LLAKGCRELRDGDYDHATETYSIAVMLESRSAEAHCGLGKALIAAGNRTDGFESLVTAFQLDSLLPEVKDGFREYYRKEIEADPSSVDAYEGLAALCIDSGRPEEAASCYSRCLEL---TISEEAGR-------NGENGGELTD----------RRDRWEVALFKCRAALCDWKEWDASTEALRVAVRR-------------------------------------------------------------GGIEXXXXXXXXXXXXXVLHPFDSLSASLSPEECLTVARQQSRWVEAATVKMEDGSVFVEVAEIEQDGHWDQSSRTGGGQRLRLGYMSGDLMGTHPLTHLMQARLGTQECDFDGTFGSHDRSR--FEVYLYSLNAADGSKERHRMEKDVEHFRDLSAMTSQEAARTISEDCVDVLVNLNGYAGTSRSADVLVWHPASILVSYMGFPGTMGSSRLSNYILADGIVIPESLREHYSEKVM 1215 LLA G ++ + GD + A + A RSA LG+AL+ G +GF LV AF +DSL P VKDGFREYYR EIEADP++VD +EGLAALC+DSG PEEAA+ Y R L L +E +GR N G+L+ R+DRW VALFKC A+LC W +W+ ALR AVRR GG++ LHPFDSLSA LS +CL VA+QQ+R V A + DG D+ RT GG+ + G + G L L A + R R FEV+LY+LN DGS R RME++VE+FRDLS MT+ EAA I++D V VLVNL GYAGT +SAD+ PA++ VSYMGFPGTMGSS + +YILAD +V+P LR YSEKV+ Sbjct: 67 LLALGRQQTQAGDLESAVYQFERAASQAPRSAVCQTELGRALVRLGRGQEGFNCLVAAFGIDSLCPGVKDGFREYYRAEIEADPNNVDLHEGLAALCVDSGNPEEAAALYRRLLGLHATATAEGSGRIRSFSSSNPSAAGDLSSKETTEAAAAARKDRWSVALFKCNASLCQWDDWNGEALALRTAVRRRGWRRRGRTRGEGSGGRLSSMEDDGDLVHRLLLGYEDDDFERFVPRDKQQSQGNNVGDSNNGGVDGGAGAGPSRP---ALHPFDSLSAPLSIGDCLAVAQQQTRGV-LAEARGGDGGPRGR----------DEDERTSGGEGV------GGVQG-QSLRRLFHAGFSSPSSS-SSLRDERGRVRLGFEVFLYALNPDDGSAPRRRMEREVENFRDLSMMTAGEAAAAIADDGVGVLVNLGGYAGTVKSADIFALRPAAVAVSYMGFPGTMGSSEMVDYILADAVVVPPDLRRFYSEKVI 532
BLAST of mRNA_C-tenellus_contig8123.4.1 vs. uniprot
Match: A0A835Z2W6_9STRA (Glycosyl transferase family 41-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z2W6_9STRA) HSP 1 Score: 238 bits (606), Expect = 1.890e-68 Identity = 143/361 (39.61%), Postives = 191/361 (52.91%), Query Frame = 1 Query: 172 AFQLDSLLPEVKDGFREYYRKEIEADPSSVDAYEGLAALCIDSGRPEEAASCYSRCLELTISEEAGRNGENGGELTDRRDRWEVALFKCRAALCDWKEWDASTEALRVAVRRGGIEXXXXXXXXXXXXXVLHPFDSLSASLSPEECLTVARQQSRWVEAATVKMEDGSVFVEVAEIEQDGHWDQSSRTGGG---------QRLRLGYMSGDLMGTHPLTHLMQARLGTQECDFDGTFGSHDRSRFEVYLYSLNAADGSKERHRMEKDVEH----FRDLSAMTSQEAARTISEDCVDVLVNLNGYAGTSRSADVLVWHPASILVSYMGFPGTMGSSRLSNYILADGIVIPESLREHYSEKVM 1215 AF LD+ P +K GF EYY I A+P +DA EGLA L DSG +AA + RC+++ + GG R D W +L CRAA+CDW+ W+ LR VRRG + V+HPFD+LS L+ + +A Q +R V A E + QR+R+ Y++GDLMGTHPLTHLMQ+ FG HD +RFEV +Y+L A DGS+ER R+ D+E DLSA+ ++ AA + D DV +NLNGYAGT +SA++ PA + VSYMGFPGTMG+ + +Y+LAD V+P LR H SE V+ Sbjct: 31 AFALDAFAPGIKKGFEEYYLASIAANPQDLDAVEGLAVLYQDSGNYTQAAELFRRCMDMQTAP--------GG----RADWWFASLLNCRAAVCDWRAWEEDAAQLRGLVRRGDVRDGDMP--------VIHPFDALSRPLTAADNRVIATQYARSVSARMAAEEAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXPQPHQRIRIAYVTGDLMGTHPLTHLMQS-----------VFGLHDAARFEVRVYALCADDGSRERARVRADIERGGGALVDLSALPARAAAAALRGDGCDVAINLNGYAGTVKSAEIFALRPAPLCVSYMGFPGTMGADWV-DYLLADETVVPRHLRAHVSEHVL 359
BLAST of mRNA_C-tenellus_contig8123.4.1 vs. uniprot
Match: A0A7S0R8S5_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0R8S5_9CHLO) HSP 1 Score: 140 bits (352), Expect = 2.370e-32 Identity = 119/400 (29.75%), Postives = 171/400 (42.75%), Query Frame = 1 Query: 97 EAHCGLGKALIAAGNRTDGFESLVTAFQLDSLLPEVKDGFREYYRKEIEADP-------SSVDAYEGLAALCIDSGRPEEAASCYSRCLELTISEEAGRNGENGGELTDRRDRWEVALFKCRAAL--------------------CDWKEWDASTEALRVAVRRGGIEXXXXXXXXXXXXXVLHPFDSLSASLSPEECLTVARQQSRWVEAATVKMEDGSVFVEVAEIEQDGHWDQSSRTGGGQRLRLGYMSGDLMGTHPLTHLMQARLGTQECDFDGTFGSHDRSRFEVYLYSLNAADGSKERHRMEKDVEHFRDLSAMTSQEAARTISEDCVDVLVNLNGYAGTSRSADVLVWHPASILVSYMGFPGTMGSSRLSNYILADGIVIPESLREHYSEKVM 1215 EA LG AL AG + + QL + + + A P S Y LAA+ GR +EA +CY L ++ N G + E A+ R AL CDW+E DA L +RR + PF +++ L + L + + + A + G F GQRLRLGY S D G HPL+HLM + FG H+RSR EV+ ++L+A+DGS+ R R+E++ EHF D+SA+T + A IS + +LV+LNGY +R ++ PA I VSYMGFP T G+S + NY++ D +V P L+ YSE ++ Sbjct: 465 EACNDLGNALREAGRHQEAVNCYLACLQLHAAAA-------TQHAQGAAASPAPHLLVYSVAITYNNLAAVLKLQGRADEACACYEHVTRL--QPDSAEAFANLGNAFKDAAQQEQAITAYRQALVLRPDYPPVLGNLVHSLQCVCDWRERDALFLQLEGDIRR---------QLAAGLPSAVQPFHAMAYPLDSQIVLDLTVMHAHHAQLAADHLACGP-FPHPPRAPLQA----------GQRLRLGYCSSDF-GNHPLSHLMGS-----------VFGKHNRSRIEVFCFALSASDGSEWRRRIEREAEHFEDVSALTVPQVAAKISSLGIQILVDLNGYTKGAR-IELFALRPAPIQVSYMGFPATTGASYI-NYLITDRVVAPPHLKHCYSENLV 821
BLAST of mRNA_C-tenellus_contig8123.4.1 vs. uniprot
Match: A0A5N6Q0E8_9ASTR (Protein O-GlcNAc transferase n=1 Tax=Mikania micrantha TaxID=192012 RepID=A0A5N6Q0E8_9ASTR) HSP 1 Score: 133 bits (335), Expect = 4.500e-30 Identity = 72/161 (44.72%), Postives = 101/161 (62.73%), Query Frame = 1 Query: 733 TGGGQRLRLGYMSGDLMGTHPLTHLMQARLGTQECDFDGTFGSHDRSRFEVYLYSLNAADGSKERHRMEKDVEHFRDLSAMTSQEAARTISEDCVDVLVNLNGYAGTSRSADVLVWHPASILVSYMGFPGTMGSSRLSNYILADGIVIPESLREHYSEKVM 1215 TGG RL++GY+S D G HPL+HLM + FG H+R EV+ Y+L+ DGS+ R R++ + EHF+D+SAMTS AR I+ED + +L+NLNGY +R+ ++ PA I VSYMGFPGT G+S + Y++ D V P YSEK++ Sbjct: 601 TGGNNRLKIGYVSSDF-GNHPLSHLMGS-----------VFGMHNRENVEVFCYALSPNDGSEWRLRIQSEAEHFKDVSAMTSDMIARLINEDQIQILINLNGYTKGARN-EIFALQPAPIQVSYMGFPGTTGASYIQ-YLVTDEFVSPTRFAHIYSEKLV 747
BLAST of mRNA_C-tenellus_contig8123.4.1 vs. uniprot
Match: A0A5J4XPB1_9CHLO (Protein O-GlcNAc transferase n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4XPB1_9CHLO) HSP 1 Score: 132 bits (333), Expect = 6.690e-30 Identity = 84/255 (32.94%), Postives = 132/255 (51.76%), Query Frame = 1 Query: 448 LCDWKEWDASTEALRVAVRRGGIEXXXXXXXXXXXXXVLHPFDSLSASLSPEECLTVARQQSRWVEAATVKMEDGSVFVEVAEIEQDGHWDQSSRTGGGQRLRLGYMSGDLMGTHPLTHLMQARLGTQECDFDGTFGSHDRSRFEVYLYSLNAADGSKERHRMEKDVEHFRDLSAMTSQEAARTISEDCVDVLVNLNGYAGTSRSADVLVWHPASILVSYMGFPGTMGSSRLSNYILADGIVIPESLREHYSEKV 1212 +C+W++ L VRR + PF +++ S E L ++ + + + A +M V ++ + R GQRLR+GY+SGD G HPL+HLM + FG HDRSR EV+ Y+L+ +DGS+ R R+E++ EHF D+S+ + + A IS D + + +NLNGY +R+ ++ PA + SYMGFP T G+S L Y++ D +V PE+ + YSE + Sbjct: 521 ICEWQDRQPLFVRLETEVRR---------ELAADRLPPVQPFHAMAYPFSAELALKISAKYAEYCAVAAARMA-------VPKLPHP----PAHRLQAGQRLRIGYVSGDF-GNHPLSHLMAS-----------VFGGHDRSRLEVFCYALSPSDGSEWRQRIEREAEHFLDVSSWSVGDIAGKISSDEIQIAINLNGYTKGARN-EIFALLPAPVQTSYMGFPATTGASFLP-YLITDRVVAPENCQHCYSENL 741
BLAST of mRNA_C-tenellus_contig8123.4.1 vs. uniprot
Match: A0A7J6FV05_CANSA (Probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY n=4 Tax=Cannabaceae TaxID=3481 RepID=A0A7J6FV05_CANSA) HSP 1 Score: 132 bits (332), Expect = 9.110e-30 Identity = 71/160 (44.38%), Postives = 102/160 (63.75%), Query Frame = 1 Query: 736 GGGQRLRLGYMSGDLMGTHPLTHLMQARLGTQECDFDGTFGSHDRSRFEVYLYSLNAADGSKERHRMEKDVEHFRDLSAMTSQEAARTISEDCVDVLVNLNGYAGTSRSADVLVWHPASILVSYMGFPGTMGSSRLSNYILADGIVIPESLREHYSEKVM 1215 GG +RLR+GY+S D G HPL+HLM + FG HDR EV+ Y+L+A DGS+ R R++ +VEHF ++S+M+S AR I+ED + +LVNLNGY +R+ ++ PA I +SYMGFPGT G+ + +Y++ D V P YSEK++ Sbjct: 606 GGSKRLRVGYVSSDF-GNHPLSHLMGS-----------VFGMHDRENVEVFCYALSANDGSEWRVRIQSEVEHFIEVSSMSSDMIARMINEDKIQILVNLNGYTKGARN-EIFAMQPAPIQISYMGFPGTTGADYI-HYLVTDEFVSPSRFSHIYSEKIV 751
BLAST of mRNA_C-tenellus_contig8123.4.1 vs. uniprot
Match: D8R5W3_SELML (Probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY n=3 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8R5W3_SELML) HSP 1 Score: 131 bits (330), Expect = 1.650e-29 Identity = 85/263 (32.32%), Postives = 132/263 (50.19%), Query Frame = 1 Query: 427 LFKCRAALCDWKEWDASTEALRVAVRRGGIEXXXXXXXXXXXXXVLHPFDSLSASLSPEECLTVARQQSRWVEAATVKMEDGSVFVEVAEIEQDGHWDQSSRTGGGQRLRLGYMSGDLMGTHPLTHLMQARLGTQECDFDGTFGSHDRSRFEVYLYSLNAADGSKERHRMEKDVEHFRDLSAMTSQEAARTISEDCVDVLVNLNGYAGTSRSADVLVWHPASILVSYMGFPGTMGSSRLSNYILADGIVIPESLREHYSEKVM 1215 L +CDW D E ++ +++ + PF +++ L P L ++R+ + + FV + + GG RLRLGY+S D G HPL+HLM + F H+R EV+ Y+L+ +DGS+ R R+ + EHF+D+SAM+S ARTI++D + VLVNLNGY +++ ++ PA I VSYMGFPGT G+ + +Y++ D +V P YSEK++ Sbjct: 510 LLHTLQCVCDWDGRDKKFEEVQEIIKK---------QIKMEVLPSVQPFHAIAYPLDPLLALEISRKYAEHCSLVASRF-SLQPFVHPPAV-------RVKDEGGSGRLRLGYVSSDF-GNHPLSHLMGS-----------VFKMHNRKNVEVFCYALSQSDGSEWRQRIMNEAEHFKDMSAMSSDMIARTIADDQIQVLVNLNGYTKGAKN-EIFALKPAPIQVSYMGFPGTTGAQYI-DYLVVDELVCPNEFAHIYSEKLV 741
BLAST of mRNA_C-tenellus_contig8123.4.1 vs. uniprot
Match: UPI0018F856D2 (probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SEC n=1 Tax=Tripterygium wilfordii TaxID=458696 RepID=UPI0018F856D2) HSP 1 Score: 129 bits (325), Expect = 2.010e-29 Identity = 70/160 (43.75%), Postives = 102/160 (63.75%), Query Frame = 1 Query: 736 GGGQRLRLGYMSGDLMGTHPLTHLMQARLGTQECDFDGTFGSHDRSRFEVYLYSLNAADGSKERHRMEKDVEHFRDLSAMTSQEAARTISEDCVDVLVNLNGYAGTSRSADVLVWHPASILVSYMGFPGTMGSSRLSNYILADGIVIPESLREHYSEKVM 1215 GG +RLR+GY+S D G HPL+HLM + FG HDR EV+ Y+L+ DG++ R R++ + EHF ++SAM+S A+ I+ED + +LVNLNGY +R+ ++ PA I VSYMGFPGT G++ + +Y++ D V P L YSEK++ Sbjct: 135 GGSERLRVGYVSSDF-GNHPLSHLMGS-----------VFGMHDRENVEVFCYALSPNDGTEWRQRIQSEAEHFIEVSAMSSDMIAKLINEDKIQILVNLNGYTKGARN-EIFAMQPAPIQVSYMGFPGTTGTTYI-DYLVTDEFVSPIRLAHIYSEKLV 280
BLAST of mRNA_C-tenellus_contig8123.4.1 vs. uniprot
Match: A0A6S7M711_LACSI (Probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY n=7 Tax=Asteraceae TaxID=4210 RepID=A0A6S7M711_LACSI) HSP 1 Score: 131 bits (329), Expect = 2.250e-29 Identity = 71/161 (44.10%), Postives = 101/161 (62.73%), Query Frame = 1 Query: 733 TGGGQRLRLGYMSGDLMGTHPLTHLMQARLGTQECDFDGTFGSHDRSRFEVYLYSLNAADGSKERHRMEKDVEHFRDLSAMTSQEAARTISEDCVDVLVNLNGYAGTSRSADVLVWHPASILVSYMGFPGTMGSSRLSNYILADGIVIPESLREHYSEKVM 1215 TGG RL++GY+S D G HPL+HLM + FG H+R EV+ Y+L+ DGS+ R R++ + EHF+D+SAMTS AR I+ED + +L+NLNGY +R+ ++ PA I VSYMGFPGT G++ + Y++ D V P YSEK++ Sbjct: 618 TGGYNRLKIGYVSSDF-GNHPLSHLMGS-----------VFGMHNRENVEVFCYALSPNDGSEWRVRIQSEAEHFKDVSAMTSDMIARLINEDQIQILINLNGYTKGARN-EIFALQPAPIQVSYMGFPGTTGANYIQ-YLVTDEFVSPTRFAHIYSEKLV 764 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig8123.4.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig8123.4.1 >prot_C-tenellus_contig8123.4.1 ID=prot_C-tenellus_contig8123.4.1|Name=mRNA_C-tenellus_contig8123.4.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=406bp LLAKGCRELRDGDYDHATETYSIAVMLESRSAEAHCGLGKALIAAGNRTDback to top mRNA from alignment at C-tenellus_contig8123:3504..6151+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig8123.4.1 ID=mRNA_C-tenellus_contig8123.4.1|Name=mRNA_C-tenellus_contig8123.4.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=2648bp|location=Sequence derived from alignment at C-tenellus_contig8123:3504..6151+ (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig8123:3504..6151+ >mRNA_C-tenellus_contig8123.4.1 ID=mRNA_C-tenellus_contig8123.4.1|Name=mRNA_C-tenellus_contig8123.4.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=1218bp|location=Sequence derived from alignment at C-tenellus_contig8123:3504..6151+ (Choristocarpus tenellus KU2346)back to top |