prot_C-tenellus_contig7967.2.2 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig7967.2.2
Unique Nameprot_C-tenellus_contig7967.2.2
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length615
Homology
BLAST of mRNA_C-tenellus_contig7967.2.2 vs. uniprot
Match: A0A6H5K6S2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6S2_9PHAE)

HSP 1 Score: 84.7 bits (208), Expect = 3.270e-13
Identity = 103/371 (27.76%), Postives = 153/371 (41.24%), Query Frame = 0
Query:   55 RVSAATAVDRVSQSMRLEDSLDQTVLSAKELSASVVAMVCGTLSSSHHQRSGTPVPMMVNRGQKEYN-FKNLDEYLIKVRGELDRRGISSKMFQAQLLLDLQAEAHRFQGAPSTREPLSKEVRTKERGGVCPGAEESYTYCREAPSLLGIVWRLHESGLLPMSRLLEAEEALPPPN----LRTPED-------LLGNFSDTLVDEMKRLTLPPPWDGSRQVTRAHTHPFAESVPLADGSGGARVGQSSNDRK--LFTNIAKYLFDLGYGYCHVTGAPLALGRDGRSHPWGSRNISATESAGGAGLSREGMGEGGQEVLASIAARGVLDRLCCGGDLFSASCNGSSTVSDGDQSSMVARTVCLALLEAVDPI 411
            R+ AA  V  V+    L+ +  Q    A++ +A+VVA++          R+ +   +     ++  N ++  D  L+ V+ +L R  +SS++FQ QLL  L+      +G P   E      R   RGG CP            P  L + WRLH+  LLP+SRLLEA E+LP P      R+ ED       L G+  + +V++M+ L                          A  SGG   G S       L + +A +LFDL Y             R+G S   G  + + T  A                 LAS AAR VLDRLCC   +F           +G +S +     CL++L A+ P+
Sbjct:    7 RLKAAEVVGNVNPCTILDSTCGQVAKVARDSAAAVVALM----------RNASNRELCRGSDEEATNLWEAFDAGLLAVQAQLARGSVSSQVFQTQLLSTLR------RGDPRRCEEKGTGRR---RGGECP------------PVPLALYWRLHKLALLPLSRLLEANESLPSPGDLGWHRSCEDQRMFFGGLHGDSLEAIVEDMRALA-------------------------ARSSGGKDRGDSRRGEAAALVSEVATHLFDLAY-------------REGPSRSGGPADGTNTTGA-----------------LASRAARTVLDRLCCDAKVFGM---------EGQESRLRG---CLSVLAAISPV 279          
BLAST of mRNA_C-tenellus_contig7967.2.2 vs. uniprot
Match: D8LII6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LII6_ECTSI)

HSP 1 Score: 81.3 bits (199), Expect = 3.870e-12
Identity = 102/376 (27.13%), Postives = 159/376 (42.29%), Query Frame = 0
Query:   55 RVSAATAVDRVSQSMRLEDSLDQTVLSAKELSASVVAMVCGTLSSSHHQRSGTPVPMMVNRGQKEYN-FKNLDEYLIKVRGELDRRGISSKMFQAQLLLDLQAEAHRFQGAPSTREPLSKEVRT--KERGGVCPGAEESYTYCREAPSLLGIVWRLHESGLLPMSRLLEAEEALPPPNLRTPEDL------------LGNFS----DTLVDEMKRLTLPPPWDGSRQVTRAHTHPFAESVPLADGSGGARVGQSSNDRKLFTNIAKYLFDLGYGYCHVTGAPLALGRDGRSHPWGSRNISATESAGGAGLSREGMGEGGQEVLASIAARGVLDRLCCGGDLFSASCNGSSTVSDGDQSSMVARTVCLALLEAVDPI 411
            R SAA  V  V+    L+ +  Q    A++ +A+VVA++          R+ T   +     ++  N ++  D  L+ V+ +L R  +SS++FQ QLL  L+             +PL  E R   + RGG CP            P  L + WRLH+  LLP+SRLLEA E+L      +PEDL             G F     + +V++M+ L      D                    + S  +R G+++    L + +A +LFDL Y             R+G S   G  +          G++  G        LAS AAR VLDRLCC   +F     G+++  +G +  +     CL++L A+ P+
Sbjct:   18 RHSAAGVVSNVNPCTILDSTCGQVAKVARDSAAAVVALM----------RNATNRELCRGSDEEATNLWEAFDAGLLAVQAQLARGSVSSQVFQTQLLSTLRRG-----------DPLRCEERGTGRRRGGECP------------PVPLALYWRLHKLALLPLSRLLEANESL-----LSPEDLGRHRSCEDQGRFFGGFHGDSLEAIVEDMRALAARSSGD--------------------EDSSDSRRGEAA---ALVSEVATHLFDLAY-------------REGPSRSGGPAD----------GINTIG-------ALASRAARTVLDRLCCDAKVF-----GANSRMEGQEWRLRG---CLSVLAAISPV 294          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig7967.2.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5K6S2_9PHAE3.270e-1327.76Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LII6_ECTSI3.870e-1227.13Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 428..469
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 330..349
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 487..517
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 413..469

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig7967contigC-tenellus_contig7967:2007..5842 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig7967.2.2mRNA_C-tenellus_contig7967.2.2Choristocarpus tenellus KU2346mRNAC-tenellus_contig7967 1989..6233 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig7967.2.2 ID=prot_C-tenellus_contig7967.2.2|Name=mRNA_C-tenellus_contig7967.2.2|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=615bp
MIEFGAVARRASNYEGYRGPVLSGYSVRAGDLLRSKDSEGKSGRHDINSQ
LSILRVSAATAVDRVSQSMRLEDSLDQTVLSAKELSASVVAMVCGTLSSS
HHQRSGTPVPMMVNRGQKEYNFKNLDEYLIKVRGELDRRGISSKMFQAQL
LLDLQAEAHRFQGAPSTREPLSKEVRTKERGGVCPGAEESYTYCREAPSL
LGIVWRLHESGLLPMSRLLEAEEALPPPNLRTPEDLLGNFSDTLVDEMKR
LTLPPPWDGSRQVTRAHTHPFAESVPLADGSGGARVGQSSNDRKLFTNIA
KYLFDLGYGYCHVTGAPLALGRDGRSHPWGSRNISATESAGGAGLSREGM
GEGGQEVLASIAARGVLDRLCCGGDLFSASCNGSSTVSDGDQSSMVARTV
CLALLEAVDPIRHSSMGEDHPQDDALACSNDNGVNMTTKGIPPSSASNAG
RVSIDENTPSSSSLYSSSAANSTPAASTVETNQDAVQVVVPVSGGDGGSL
QGAPGNTASAKAGGATEVAGGGGDKRAAKQGVVGGNSGVWVCPSGRRSLG
GEELPDRAMQAFLARQLRILFESRGGGASGTMADGGGGGWSLSTSHDSFR
GEVCVLCCCFTVME*
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