prot_C-tenellus_contig7902.2.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig7902.2.1
Unique Nameprot_C-tenellus_contig7902.2.1
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length70
Homology
BLAST of mRNA_C-tenellus_contig7902.2.1 vs. uniprot
Match: D8LJ72_ECTSI (Photosystem II 11 kDa protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LJ72_ECTSI)

HSP 1 Score: 120 bits (300), Expect = 1.470e-32
Identity = 58/68 (85.29%), Postives = 66/68 (97.06%), Query Frame = 0
Query:    2 KQMTDFVANYRRSTSISGRLSYSNLYTSISVLAGHYASYGPKFPVPEKRRKRLMQEYNDIERAIKRQR 69
            K+M +FV+NYRRS++I+G+LSYSNLYTSISVLAGHYASYGPKFPVPEKRRKRL+QEY DIERAIKRQR
Sbjct:  139 KEMVEFVSNYRRSSNINGKLSYSNLYTSISVLAGHYASYGPKFPVPEKRRKRLLQEYTDIERAIKRQR 206          
BLAST of mRNA_C-tenellus_contig7902.2.1 vs. uniprot
Match: A0A836CEQ5_9STRA (Photosystem II Pbs27-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEQ5_9STRA)

HSP 1 Score: 110 bits (276), Expect = 4.770e-29
Identity = 53/68 (77.94%), Postives = 63/68 (92.65%), Query Frame = 0
Query:    2 KQMTDFVANYRRSTSISGRLSYSNLYTSISVLAGHYASYGPKFPVPEKRRKRLMQEYNDIERAIKRQR 69
            ++M DFV+ YRR  ++SG+LSYSNLYTSI+VLAGHYASYGPKFPVPEKRRKRL++EYN IE+AIKRQR
Sbjct:  129 QEMIDFVSYYRRFPNVSGKLSYSNLYTSINVLAGHYASYGPKFPVPEKRRKRLLEEYNQIEKAIKRQR 196          
BLAST of mRNA_C-tenellus_contig7902.2.1 vs. uniprot
Match: A0A7S2UVY8_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UVY8_9STRA)

HSP 1 Score: 110 bits (275), Expect = 1.170e-28
Identity = 52/68 (76.47%), Postives = 61/68 (89.71%), Query Frame = 0
Query:    2 KQMTDFVANYRRSTSISGRLSYSNLYTSISVLAGHYASYGPKFPVPEKRRKRLMQEYNDIERAIKRQR 69
            KQM DFVA YRR+  ++GRLSYS LYTSI+VLAGHYASYGPKFPVPEKRRKRL+QEYNDIE+ +++ R
Sbjct:  151 KQMVDFVAQYRRNNKVNGRLSYSTLYTSINVLAGHYASYGPKFPVPEKRRKRLLQEYNDIEKNMRKNR 218          
BLAST of mRNA_C-tenellus_contig7902.2.1 vs. uniprot
Match: A0A836C8X1_9STRA (Photosystem II Pbs27-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8X1_9STRA)

HSP 1 Score: 108 bits (271), Expect = 1.990e-28
Identity = 52/68 (76.47%), Postives = 63/68 (92.65%), Query Frame = 0
Query:    2 KQMTDFVANYRRSTSISGRLSYSNLYTSISVLAGHYASYGPKFPVPEKRRKRLMQEYNDIERAIKRQR 69
            ++M DFV+ YRR  ++SG+LSYSNLYTSI+VLAGHYASYGPKFPVPEKRRKRLM+EY+ I++AIKRQR
Sbjct:  117 QEMIDFVSYYRRFPNVSGKLSYSNLYTSINVLAGHYASYGPKFPVPEKRRKRLMEEYSQIDKAIKRQR 184          
BLAST of mRNA_C-tenellus_contig7902.2.1 vs. uniprot
Match: F0YDF6_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YDF6_AURAN)

HSP 1 Score: 99.4 bits (246), Expect = 1.290e-25
Identity = 48/68 (70.59%), Postives = 59/68 (86.76%), Query Frame = 0
Query:    2 KQMTDFVANYRRSTSISGRLSYSNLYTSISVLAGHYASYGPKFPVPEKRRKRLMQEYNDIERAIKRQR 69
            K+M DFVA YRR T++SG+ S+S LYT+I+VLAGHY SYGPKFPVPEKRRKRL QEY +IE+ IK++R
Sbjct:   35 KEMIDFVAFYRRFTNVSGKQSFSTLYTAINVLAGHYTSYGPKFPVPEKRRKRLYQEYAEIEKNIKKRR 102          
BLAST of mRNA_C-tenellus_contig7902.2.1 vs. uniprot
Match: A0A6V1P1T2_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1P1T2_HETAK)

HSP 1 Score: 100 bits (248), Expect = 6.660e-25
Identity = 47/68 (69.12%), Postives = 59/68 (86.76%), Query Frame = 0
Query:    2 KQMTDFVANYRRSTSISGRLSYSNLYTSISVLAGHYASYGPKFPVPEKRRKRLMQEYNDIERAIKRQR 69
            KQM DF++ YRR  ++SG++SYS LYTS++VLAGHYASYG KFPVPEKRRKRL QEY +IE+ +K+QR
Sbjct:  122 KQMIDFISYYRRFPNVSGKMSYSTLYTSVNVLAGHYASYGTKFPVPEKRRKRLAQEYAEIEKNLKKQR 189          
BLAST of mRNA_C-tenellus_contig7902.2.1 vs. uniprot
Match: A0A7S3ZPN6_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZPN6_9STRA)

HSP 1 Score: 98.2 bits (243), Expect = 9.050e-25
Identity = 46/68 (67.65%), Postives = 59/68 (86.76%), Query Frame = 0
Query:    2 KQMTDFVANYRRSTSISGRLSYSNLYTSISVLAGHYASYGPKFPVPEKRRKRLMQEYNDIERAIKRQR 69
            K+M DFV+ YRR T++SG+ S+S LYT+I+VLAGHY SYGPKFPVPEKRRKRL QEY ++E+ IK++R
Sbjct:   67 KEMIDFVSFYRRFTNVSGKQSFSTLYTAINVLAGHYTSYGPKFPVPEKRRKRLFQEYAEVEKNIKKRR 134          
BLAST of mRNA_C-tenellus_contig7902.2.1 vs. uniprot
Match: A0A7S3NKQ6_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NKQ6_9STRA)

HSP 1 Score: 97.8 bits (242), Expect = 4.600e-24
Identity = 47/68 (69.12%), Postives = 59/68 (86.76%), Query Frame = 0
Query:    2 KQMTDFVANYRRSTSISGRLSYSNLYTSISVLAGHYASYGPKFPVPEKRRKRLMQEYNDIERAIKRQR 69
            K+M  FVA YRR T+++G+ S+S LYT+I+VLAGHY SYGPKFPVPEKRRKRL QEY++IE+ IKR+R
Sbjct:  116 KEMNAFVAFYRRFTTVTGKQSFSTLYTAINVLAGHYTSYGPKFPVPEKRRKRLYQEYDEIEKNIKRKR 183          
BLAST of mRNA_C-tenellus_contig7902.2.1 vs. uniprot
Match: W7TYA6_9STRA (Photosystem ii 11 kd protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TYA6_9STRA)

HSP 1 Score: 96.3 bits (238), Expect = 2.180e-23
Identity = 44/67 (65.67%), Postives = 58/67 (86.57%), Query Frame = 0
Query:    3 QMTDFVANYRRSTSISGRLSYSNLYTSISVLAGHYASYGPKFPVPEKRRKRLMQEYNDIERAIKRQR 69
            +MTDFV+ YRR  +++G+ S+S LYT+I+V+AGHYASYGPKFP+PEKRRKRL QE+ +I+R IKR R
Sbjct:  124 EMTDFVSYYRRFNNVAGKPSFSTLYTAINVMAGHYASYGPKFPIPEKRRKRLQQEFTEIDRNIKRNR 190          
BLAST of mRNA_C-tenellus_contig7902.2.1 vs. uniprot
Match: A0A1E7ETC2_9STRA (Uncharacterized protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7ETC2_9STRA)

HSP 1 Score: 92.4 bits (228), Expect = 5.900e-22
Identity = 44/68 (64.71%), Postives = 57/68 (83.82%), Query Frame = 0
Query:    2 KQMTDFVANYRRSTSISGRLSYSNLYTSISVLAGHYASYGPKFPVPEKRRKRLMQEYNDIERAIKRQR 69
            K+M DFV+ YRR   I+G+ S+S LYTSI+VLAGHY SYG K+P+PEKRRKRL QEY++IE+++KR R
Sbjct:  116 KEMVDFVSYYRRFPKIAGKPSFSTLYTSINVLAGHYTSYGYKYPLPEKRRKRLYQEYSEIEKSLKRSR 183          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig7902.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LJ72_ECTSI1.470e-3285.29Photosystem II 11 kDa protein n=2 Tax=Ectocarpus T... [more]
A0A836CEQ5_9STRA4.770e-2977.94Photosystem II Pbs27-domain-containing protein n=1... [more]
A0A7S2UVY8_9STRA1.170e-2876.47Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A836C8X1_9STRA1.990e-2876.47Photosystem II Pbs27-domain-containing protein n=1... [more]
F0YDF6_AURAN1.290e-2570.59Uncharacterized protein (Fragment) n=1 Tax=Aureoco... [more]
A0A6V1P1T2_HETAK6.660e-2569.12Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S3ZPN6_9STRA9.050e-2567.65Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7S3NKQ6_9STRA4.600e-2469.12Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
W7TYA6_9STRA2.180e-2365.67Photosystem ii 11 kd protein n=2 Tax=Monodopsidace... [more]
A0A1E7ETC2_9STRA5.900e-2264.71Uncharacterized protein n=1 Tax=Fragilariopsis cyl... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 51..69
NoneNo IPR availablePANTHERPTHR34041:SF1PHOTOSYSTEM II REPAIR PROTEIN PSB27-H1, CHLOROPLASTICcoord: 2..69
IPR025585Photosystem II Pbs27PFAMPF13326PSII_Pbs27coord: 2..65
e-value: 3.0E-18
score: 66.5
IPR025585Photosystem II Pbs27PANTHERPTHR34041PHOTOSYSTEM II REPAIR PROTEIN PSB27-H1, CHLOROPLASTICcoord: 2..69
IPR038450Photosystem II Pbs27 superfamilyGENE3D1.20.58.810Photosystem II Pbs27coord: 1..69
e-value: 2.5E-22
score: 81.3

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig7902contigC-tenellus_contig7902:5120..5986 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig7902.2.1mRNA_C-tenellus_contig7902.2.1Choristocarpus tenellus KU2346mRNAC-tenellus_contig7902 5120..5989 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig7902.2.1 ID=prot_C-tenellus_contig7902.2.1|Name=mRNA_C-tenellus_contig7902.2.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=70bp
MKQMTDFVANYRRSTSISGRLSYSNLYTSISVLAGHYASYGPKFPVPEKR
RKRLMQEYNDIERAIKRQR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR025585PSII_Pbs27
IPR038450PSII_Pbs27_sf