prot_C-tenellus_contig789.1.2 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig789.1.2
Unique Nameprot_C-tenellus_contig789.1.2
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length836
Homology
[Close]
BLAST of mRNA_C-tenellus_contig789.1.2 vs. uniprot
Match: D8LHL0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LHL0_ECTSI)

HSP 1 Score: 110 bits (274), Expect = 1.040e-20
Identity = 91/249 (36.55%), Postives = 114/249 (45.78%), Query Frame = 0 
Query:  349 ESGRVGPGV----------EAELLSLGVHLFLVKVSGFSNSPEQVKSTKQQWVKNVLLKHLT---DDALKRTPVPRLDPNRFGWGDGSGGSGVSGFDDQNLAVQYEASLKSAHHRAFSRAAYLALRGGRSLCSGDLNTALK-CTEARHRVEITLLRRIKLDASRQREIVSGGGGDGGMVXXXSSAGDGLEGAGEEGEDNAVGVSKREWGRSEHGQEQD--SCNKEFTAIVSRYLRPVPGTRYYIYWKSE 581
            +SGR GPG           E E  SLG+ LFLV+ SG    P + +S K + ++ +LL H+      A+   P  R+     GWGD  GG  V       LA  Y+  +   H RAF R  Y ALR GR LCSGDL  AL  C E    V IT LRR+ LD                                      A G  + +   +    E D  +C+ EFT+I+SRYLRPVPGT YYIYW+SE
Sbjct:  854 KSGRKGPGRGGACAGKGGNEDEDDSLGLFLFLVR-SGDFGLPIEPQSAKLRDIRRILLAHIPRSHHQAMAFKPARRI-----GWGDDPGGGRVG-----TLARSYQGLVNLEHRRAFLRVVYAALREGRMLCSGDLAFALSGCGETSREVNITRLRRVVLDNGT-----------------------------------AEGAPRADPADAAQQAEPDKAACDVEFTSILSRYLRPVPGTVYYIYWESE 1056
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig789.1.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LHL0_ECTSI1.040e-2036.55Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 83..103
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..36
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 506..551
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 587..631
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 591..615
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 113..168
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 671..708
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 533..551
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 52..78

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig789contigC-tenellus_contig789:41..4362 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig789.1.2mRNA_C-tenellus_contig789.1.2Choristocarpus tenellus KU2346mRNAC-tenellus_contig789 41..4363 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig789.1.2 ID=prot_C-tenellus_contig789.1.2|Name=mRNA_C-tenellus_contig789.1.2|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=836bp
TKHVLHTDENSLGPPSGVGPAGQGSTGQGSEEKESELCPTCGVHRVVCIE
GEEDGQVDGRSDGQQGSEGTTFGLKEGELEPANNQLYRMLEQALQAYNQV
EIDWGFDVLDQPSPSQSPVLGKAQRQKRVPLHTGRRPHKASKASSVQPGL
GGRRISGSLHTHPQTSSRMQSFPGIFGKLPAKLVRGGRWYGRALGDDTVL
VTFLPSLHAWEEDMTTRTATRTMPSYNSSVDASGRGKFGGRGKSSAWDSR
RRVWCSRDDMEATLGEGDGVAQAGVGGVKGVGAGGGLGNKNFLPRRKTEE
NLCRAALGSGSTSGVNSITRQGSWGSVLGRGGNGSWSALTSLRPGGVLES
GRVGPGVEAELLSLGVHLFLVKVSGFSNSPEQVKSTKQQWVKNVLLKHLT
DDALKRTPVPRLDPNRFGWGDGSGGSGVSGFDDQNLAVQYEASLKSAHHR
AFSRAAYLALRGGRSLCSGDLNTALKCTEARHRVEITLLRRIKLDASRQR
EIVSGGGGDGGMVGGGSSAGDGLEGAGEEGEDNAVGVSKREWGRSEHGQE
QDSCNKEFTAIVSRYLRPVPGTRYYIYWKSEAALDQEIEIDAPPSEAEES
GDDFEREEDEDEGIGTQLGQGEGIGAGSLYLQHLPSRESRGKLSWGMPGT
EATFGESVAAAIRAGERSGVGAGSGVRGGGGGGGVGSSRVSSPGVRGSVR
QRDGVPLGQLSLPAVSPPPPLFVRFECLHTSEGGGQRRYAVDNQHTLGQA
LLADAPTVIESWHLEPSPWGRGGPSPTKGRTFLCIITTEFPSAVRGPTGG
TAVGLGVGGGSGPGNFMGCGLASPRDVSTHMLWGEG
back to top